NO04G03140, NO04G03140 (gene) Nannochloropsis oceanica

Overview
NameNO04G03140
Unique NameNO04G03140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1960
Alignment locationchr4:857311..859270 +

Link to JBrowse

Properties
Property NameValue
DescriptionSphingosine kinase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:857311..859270 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0016301kinase activity
GO:0003951NAD+ kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR016064NAD/diacylglycerol_kinase
IPR001206Diacylglycerol_kinase_cat_dom
Vocabulary: Biological Process
TermDefinition
GO:0016310phosphorylation
Homology
BLAST of NO04G03140 vs. NCBI_GenBank
Match: XP_013398401.1 (sphingosine kinase 1 isoform X1 [Lingula anatina])

HSP 1 Score: 196.4 bits (498), Expect = 1.900e-46
Identity = 126/430 (29.30%), Postives = 198/430 (46.05%), Query Frame = 0
Query:  131 VNPKSGKQQAHSIYTAVVAPMLAQADIEHEMVVTMRMQHAKDMIYALDVEAWDGVVAIGGDGLLSDVINGLFSRDPENQRALLELPVAIVNGGTGNGFFSSLLHRQNEAF--NPISATFLLLKAKSTLPADLSLVETADGQRHISFLSLSFGLIADVDLESEVIRWAGALRMDLFSLYAIFRSRTYRARLSFWSCEE-----------------------------------------GESSFADAIH--------------------------------------------------------------LPPLHTPLPMKNEWISIEDDFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRLISLFMALEHGDHVPLKEVEIYHARAYRLEPLTDQGRYSLDGETIPFGHVQGKILP 456
            VNP SG  +A  IY   V P LA+ D+   +++T R  HAKD++  +D+  W GV+ + GDGL+ +VINGL SR P+ + A+  LP+ +V GG+GN    ++     E +  N ++ +  +L        DL  V+T +G RH SFLS+++G+I+DVD+ESE  R  G  R  + +L  I   RTY  RLSF  CE                                          G+S+  + +                                                               LPPL  P+P    W++IED+F+T++ ++ SH+   +  AP     DG   LM  +  + +SR  L+ LF+++E+G HV   ++EI   +A+RLEP+T  G  ++DGE + +G +Q ++LP
Sbjct:  152 VNPFSGPGKALDIYQKRVVPTLAELDLNFHLIITERAGHAKDVVKTIDISEWYGVIIVSGDGLIFEVINGLMSR-PDWEHAIHHLPLGVVPGGSGNALCCAINSHNGEPYKDNILTHSLFVLAKHKIKALDLVAVDTCEG-RHYSFLSITWGIISDVDIESEKYRSLGNARFTVGALVRIVGLRTYHGRLSFLPCEPYRCHTSRSTSCSTWEPSVNANTADVVTSQPKSRSLSCPDGLGDSATEEVLRSRLQHGGPADEPLTPVFPEEGGGDLETVIANSSTPAADSTQLTCDSPSRGDAATPRPVETALLPPLSDPVPA--SWVTIEDNFVTVVAAYESHLGPDIIIAPEATFNDGIIHLMFAK--AGISRSSLLKLFLSMENGSHVNSPDIEIIKVKAFRLEPITPGGVIAIDGEKVKYGPIQAQVLP 575          
BLAST of NO04G03140 vs. NCBI_GenBank
Match: XP_013398402.1 (sphingosine kinase 1 isoform X2 [Lingula anatina])

HSP 1 Score: 196.4 bits (498), Expect = 1.900e-46
Identity = 126/430 (29.30%), Postives = 198/430 (46.05%), Query Frame = 0
Query:  131 VNPKSGKQQAHSIYTAVVAPMLAQADIEHEMVVTMRMQHAKDMIYALDVEAWDGVVAIGGDGLLSDVINGLFSRDPENQRALLELPVAIVNGGTGNGFFSSLLHRQNEAF--NPISATFLLLKAKSTLPADLSLVETADGQRHISFLSLSFGLIADVDLESEVIRWAGALRMDLFSLYAIFRSRTYRARLSFWSCEE-----------------------------------------GESSFADAIH--------------------------------------------------------------LPPLHTPLPMKNEWISIEDDFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRLISLFMALEHGDHVPLKEVEIYHARAYRLEPLTDQGRYSLDGETIPFGHVQGKILP 456
            VNP SG  +A  IY   V P LA+ D+   +++T R  HAKD++  +D+  W GV+ + GDGL+ +VINGL SR P+ + A+  LP+ +V GG+GN    ++     E +  N ++ +  +L        DL  V+T +G RH SFLS+++G+I+DVD+ESE  R  G  R  + +L  I   RTY  RLSF  CE                                          G+S+  + +                                                               LPPL  P+P    W++IED+F+T++ ++ SH+   +  AP     DG   LM  +  + +SR  L+ LF+++E+G HV   ++EI   +A+RLEP+T  G  ++DGE + +G +Q ++LP
Sbjct:   18 VNPFSGPGKALDIYQKRVVPTLAELDLNFHLIITERAGHAKDVVKTIDISEWYGVIIVSGDGLIFEVINGLMSR-PDWEHAIHHLPLGVVPGGSGNALCCAINSHNGEPYKDNILTHSLFVLAKHKIKALDLVAVDTCEG-RHYSFLSITWGIISDVDIESEKYRSLGNARFTVGALVRIVGLRTYHGRLSFLPCEPYRCHTSRSTSCSTWEPSVNANTADVVTSQPKSRSLSCPDGLGDSATEEVLRSRLQHGGPADEPLTPVFPEEGGGDLETVIANSSTPAADSTQLTCDSPSRGDAATPRPVETALLPPLSDPVPA--SWVTIEDNFVTVVAAYESHLGPDIIIAPEATFNDGIIHLMFAK--AGISRSSLLKLFLSMENGSHVNSPDIEIIKVKAFRLEPITPGGVIAIDGEKVKYGPIQAQVLP 441          
BLAST of NO04G03140 vs. NCBI_GenBank
Match: XP_013398403.1 (sphingosine kinase 1 isoform X3 [Lingula anatina])

HSP 1 Score: 196.4 bits (498), Expect = 1.900e-46
Identity = 126/430 (29.30%), Postives = 198/430 (46.05%), Query Frame = 0
Query:  131 VNPKSGKQQAHSIYTAVVAPMLAQADIEHEMVVTMRMQHAKDMIYALDVEAWDGVVAIGGDGLLSDVINGLFSRDPENQRALLELPVAIVNGGTGNGFFSSLLHRQNEAF--NPISATFLLLKAKSTLPADLSLVETADGQRHISFLSLSFGLIADVDLESEVIRWAGALRMDLFSLYAIFRSRTYRARLSFWSCEE-----------------------------------------GESSFADAIH--------------------------------------------------------------LPPLHTPLPMKNEWISIEDDFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRLISLFMALEHGDHVPLKEVEIYHARAYRLEPLTDQGRYSLDGETIPFGHVQGKILP 456
            VNP SG  +A  IY   V P LA+ D+   +++T R  HAKD++  +D+  W GV+ + GDGL+ +VINGL SR P+ + A+  LP+ +V GG+GN    ++     E +  N ++ +  +L        DL  V+T +G RH SFLS+++G+I+DVD+ESE  R  G  R  + +L  I   RTY  RLSF  CE                                          G+S+  + +                                                               LPPL  P+P    W++IED+F+T++ ++ SH+   +  AP     DG   LM  +  + +SR  L+ LF+++E+G HV   ++EI   +A+RLEP+T  G  ++DGE + +G +Q ++LP
Sbjct:   16 VNPFSGPGKALDIYQKRVVPTLAELDLNFHLIITERAGHAKDVVKTIDISEWYGVIIVSGDGLIFEVINGLMSR-PDWEHAIHHLPLGVVPGGSGNALCCAINSHNGEPYKDNILTHSLFVLAKHKIKALDLVAVDTCEG-RHYSFLSITWGIISDVDIESEKYRSLGNARFTVGALVRIVGLRTYHGRLSFLPCEPYRCHTSRSTSCSTWEPSVNANTADVVTSQPKSRSLSCPDGLGDSATEEVLRSRLQHGGPADEPLTPVFPEEGGGDLETVIANSSTPAADSTQLTCDSPSRGDAATPRPVETALLPPLSDPVPA--SWVTIEDNFVTVVAAYESHLGPDIIIAPEATFNDGIIHLMFAK--AGISRSSLLKLFLSMENGSHVNSPDIEIIKVKAFRLEPITPGGVIAIDGEKVKYGPIQAQVLP 439          
BLAST of NO04G03140 vs. NCBI_GenBank
Match: XP_002178970.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC49668.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 196.1 bits (497), Expect = 2.500e-46
Identity = 114/334 (34.13%), Postives = 186/334 (55.69%), Query Frame = 0
Query:  131 VNPKSG-KQQAHSIYTAVVAPMLAQADIEHEMVVTMRMQHAKDMIYAL----DVEAWDGVVAIGGDGLLSDVINGLFSRDPENQRALLELPVAIVNGGTGNGFFSSLLHRQNEAFNPISATFLLLKAKSTLPADLSLVETADGQRHISFLSLSFGLIADVDLESEVIRWAGALRMDLFSLYAIFRSRTYRARLSFWSCEEGESSFADAIHLPPLHTPLPMKNEWISIEDDFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRLISLFMALEHGDHVPLKEVEIYHARAYRLEPLTDQGRYSLDGETIPFGHVQGKILPLALQ 460
            VNP+SG K+    +    V PML QA IE ++ +T    HA++ +       D+  +DG+V +GGDG++ +  NGLF+R  +    L +L + ++  G+ NGF +SL H  +E +  ++ TFL+ K +S    D S  +T   + + SFL+ S+ +IAD+D+ESEV+ W G  R D++++  I   R Y+A  S+    E  +   + I +P L  P+P  + W ++ED F     SHV+H A   + +P  K  DG F++M++R    +SR R+  + +ALE G+HV +  VE     AYRL   T      +DGE +  G +Q ++ P ++Q
Sbjct:  261 VNPQSGPKRSGGKLCETQVQPMLEQAGIEVDVCITTHPNHAQERMAKSSTEEDIAGYDGLVLMGGDGVVHEAYNGLFAR-ADKDELLKKLKIGVIGCGSCNGFSTSLAHGSHERYGIVAETFLVAKGQSCW-HDTSRYQTTT-KSYSSFLTFSWAIIADIDIESEVLHWLGEPRNDIWAVLRILALRRYQATFSYLPATEATAD--NTITIPALSDPVP--STWTTVEDGFYLFWASHVTHAAMHTYHSPNSKFQDGIFEIMIVR--GRVSRYRMTRILLALESGNHVGMPGVEFVQCVAYRLVKETPGSFNDIDGEAVEDGPIQAQVQPHSVQ 585          
BLAST of NO04G03140 vs. NCBI_GenBank
Match: XP_018617591.1 (PREDICTED: LOW QUALITY PROTEIN: sphingosine kinase 1 [Scleropages formosus])

HSP 1 Score: 195.3 bits (495), Expect = 4.300e-46
Identity = 121/352 (34.38%), Postives = 189/352 (53.69%), Query Frame = 0
Query:  131 VNPKSGKQQAHSIYTAVVAPMLAQADIEHEMVVTMRMQHAKDMIYALDVEAWDGVVAIGGDGLLSDVINGLFSRDPENQRALLELPVAIVNGGTGNGFFSSLLHRQNEAFNP-----ISATFLLLKAKSTLPADLSLVETADGQRHISFLSLSFGLIADVDLESEVIRWAGALRMDLFSLYAIFRSRTYR----------ARLSFWSCEEGESSFADAIHLPP---------LHTPL--PMKNEWISI-EDDFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRLISLFMALEHGDHVPLKEVEIYHAR--AYRLEPLTDQGRYSLDGETIPFGHVQGKI 454
            VNP SG+ QA  ++T+ +  ML +A + H ++VT R  HA++++   D+  WD +V I GDGLL +V+NGL  RD  +    ++ P+ I+ GG+GN   +S+ H             +S  FLL K   +   DL  V  A G R  SFLSL++G +ADVD+ESE  R+ GA R  + +L  +   R YR          + L   SC    ++ A     PP         L  PL  P+ + W  + E+DF+ +L  + SH+AE + +APG  + DG   L  ++  + +SR  L+ LF+A+E G H+     ++ + +  A RLEPLT +G  ++DGE + +G VQ ++
Sbjct:    4 VNPHSGRGQALCLFTSHIQHMLTEAGVTHTLIVTERQNHARELVREADLSQWDALVIISGDGLLFEVVNGLMERD--DWEEAIQTPLGILPGGSGNALAASIHHYTGSPPGSSEDLLVSCGFLLCKGLVS-RLDLVSVSLASGLRLFSFLSLAWGFVADVDIESEKYRYVGAARFTVGTLVRLASLRVYRXXXXGRPGSCSHLPXNSCNSNNATKASRSEAPPAASGGPADSLLVPLEQPVPSHWTVVKEEDFVLVLAMYQSHLAEDLLAAPGASLEDGVMHLFYVK--AGISRAALLRLFLAMEKGVHLAAGCPDLVYVKVLALRLEPLTPKGVITVDGEVVEYGPVQAQV 350          
BLAST of NO04G03140 vs. NCBI_GenBank
Match: XP_006807867.1 (PREDICTED: sphingosine kinase 2-like [Neolamprologus brichardi])

HSP 1 Score: 194.9 bits (494), Expect = 5.600e-46
Identity = 122/349 (34.96%), Postives = 195/349 (55.87%), Query Frame = 0
Query:  131 VNPKSGKQQAHSIYTAVVAPMLAQADIEHEMVVTMRMQHAKDMIYALDVEAWDGVVAIGGDGLLSDVINGLFSRDPENQRALLELPVAIVNGGTGNGFFSSLLH--RQNEAFNP---ISATFLLLKAKSTLPADLSLVETADGQRHISFLSLSFGLIADVDLESEVIRWAGALRMDLFSLYAIFRSRTYRARLSFWSCEE----GESSF------------ADAIHLPPLHTPLPMKNEWISI-EDDFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRLISLFMALEHGDHVPLKEVEIYH--ARAYRLEPLTDQGRYSLDGETIPFGHVQGKILP 456
            VNP+SG+ QA  ++T  +  ML +A + + +V+T    HA++++   D+  WD +V + GDGLL +VINGL  R  E+ +  +++P+ I+ GG+GN   +S+ H  +   A+N    +S  F+L K     P DL  V  A  QR  SFLSL++G +ADVD+ESE  R  GA+R  + +L  +   R Y+ RL++   +E     + SF             D++ LP L  P+P  + W  + E+DF+ +L  + SH+AE + + PG    DG   L  +   + +SR  L+ LF+A+E G H+      + +   +A RLEP+T QG  ++DGE + +G VQ +I P
Sbjct:  159 VNPQSGRGQALQLFTGHIQGMLTEASVPYTLVITEHQNHARELVRKADLSQWDALVILSGDGLLFEVINGLMDR--EDWQEAIQIPLGILPGGSGNALAASVHHYSQSPPAWNEELLLSCGFMLCKG-LVGPLDLVSVHLASKQRLFSFLSLAWGFVADVDIESEKYRHVGAIRFLMGTLVRLASLRVYQGRLAYLPVKEAPKLSKGSFTTNHPPSTPQAPVDSL-LPDLEQPVP--DTWTVVKEEDFVLVLAIYQSHLAEDLWTVPGAMADDGLIHLFYV--TAGISRPALLRLFLAMEKGGHLACGCPHLVYEKVKALRLEPITPQGMITVDGEVVEYGPVQAQIHP 499          
BLAST of NO04G03140 vs. NCBI_GenBank
Match: XP_018970320.1 (PREDICTED: LOW QUALITY PROTEIN: sphingosine kinase 1-like [Cyprinus carpio])

HSP 1 Score: 194.9 bits (494), Expect = 5.600e-46
Identity = 142/439 (32.35%), Postives = 220/439 (50.11%), Query Frame = 0
Query:   37 LRDVVGSSVIETLDQTQGCKLLVFAYPRRTDRNCLCGNKRLSLERQAQHLRLTAPASS------VAKHWDALIKKWCRGGHQGXXXXXXXXXXXXXXXXXVNPKSGKQQAHSIYTAVVAPMLAQADIEHEMVVTMRMQHAKDMIYALDVEAWDGVVAIGGDGLLSDVINGLFSRDPENQRALLELPVAIVNGGTGNGFFSSLLH--RQNEAFNP---ISATFLLLKAKSTLPADLSLVETADGQRHISFLSLSFGLIADVDLESEVIRWAGALRMDLFSLYAIFRSRTYRARLSFW----SCEEGESSFADAIHLPPLH--TPL--PMKNEWISIED-DFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRLISLFMALEHGDHVPLKEVEIYH--ARAYRLEPLTDQGRYSLDGETIPFGHVQGKI 454
            LRD +GS       + QG +L ++ YP R  R    G  R   +R  +  RL    S        A+ W   I    R  H                   VNP+SG+ QA ++Y   V  ML +ADI H + +T R  HA+D++ + D+  WD +V + GDGLL +V+NGL  R  ++    ++ P+ I+ GG+GN   +S+ H  R +  +      S  FLL K   +   DL  +  + G R  SFLSL++G +ADVD+ESE  R  GALR  L +L  +   R Y+ +L+F      C    +SF+ +    P H   PL  P+  +W  +E+ +F+ +L    SH++E + +AP  +  DG   L  +   + +SR  L+ LF A++ G H+      + +  ARA RLEPL+  G  ++DGE + +G VQ ++
Sbjct:   58 LRDCLGSRAHR--GEAQGAQLCLYFYPYRR-RWMASGPVR---QRDERRFRLGTEGSDEDASLREAERWARAINTARRPEHT-HGVLFSEVRRPCGVMVLVNPQSGRGQAMALYNGHVQRMLTEADIPHTLFITERQNHARDLVRSADLTQWDALVILSGDGLLFEVVNGLMER--QDWEKAIQTPLGILPGGSGNALAASVHHYTRASPVWGEDLLTSCGFLLCKGLVS-KLDLISIRLSSGARLFSFLSLAWGFVADVDIESEQFRQIGALRFILGTLLRLASLRIYQGKLAFLPAENECGSDSASFSPSDSRLPDHLLAPLEQPVPRDWTLVEEREFVLVLAMFQSHLSEDLLAAPDARTDDGLIHLFYV--TAGISRAALLRLFRAMQSGTHLDCGCAHLVYRRARALRLEPLSAAGVMTVDGERVEYGPVQAQV 484          
BLAST of NO04G03140 vs. NCBI_GenBank
Match: XP_003737537.1 (PREDICTED: sphingosine kinase 1 [Galendromus occidentalis])

HSP 1 Score: 194.9 bits (494), Expect = 5.600e-46
Identity = 119/342 (34.80%), Postives = 188/342 (54.97%), Query Frame = 0
Query:  131 VNPKSGKQQAHSIYTAVVAPMLAQADIEHEMVVTMRMQHAKDMIYALDVEAWDGVVAIGGDGLLSDVINGLFSRDPENQRALLELPVAIVNGGTGNGFFSSLLHRQNEAF--NPISATFLLLKAKSTLPADLSLVETADGQRHISFLSLSFGLIADVDLESEVIRWAGALRMDLFSLYAIFRSRTYRARLSFWSCEEGE--SSFADA-------IHLPPLHTPLPMKNEWISIEDDFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRLISLFMALEHGDHVPLKEVEIYHARAYRLEPLTDQGRYSLDGETIPFGHVQGKILPLALQVL 462
            VNPKSG  ++  I+   V P+L++AD+ H ++VT R+ HA+D +  L+++ W G+V I GDGLL +V NGL  R    +   +++P+ ++ GG+GNG   S+ H   E +  +PI A  L          DL  +E        SFLS  +G+++D+D+ESE +R  G +R  L++ + IF  RTY  R+S+   +E    SS  DA          P L   +P  ++W+  E  F+ I  S VSH+   +  AP  ++ DG   LM+++ ++  SR +++S F+  E G HV L  V+I   RA+RLE   D    ++DGE      VQG++LP   ++L
Sbjct:  157 VNPKSGPGKSLEIFLERVRPVLSEADVSHLLLVTERINHARDFVRNLELDQWCGIVIISGDGLLHEVYNGLMERSDAEE--AIKIPIGMIPGGSGNGLARSICHASGEPYLVDPILACTLACVKGRLQELDLFRIEMPSKPPIYSFLSFGWGIMSDIDIESEKLRSIGEIRFTLWAFWRIFNLRTYSGRISYMPAKEKRIMSSPVDANANVTADDTFPTLEQKVP--DDWLVEEGRFVIIYSSLVSHLGTKLFFAPEARLDDGVTWLMMIKGEA--SRRQILSYFINQEVGKHVDLPWVKIIPVRAFRLESF-DDSIITIDGEIAHTDVVQGRVLPGKARIL 491          
BLAST of NO04G03140 vs. NCBI_GenBank
Match: CDQ77073.1 (unnamed protein product [Oncorhynchus mykiss])

HSP 1 Score: 192.2 bits (487), Expect = 3.600e-45
Identity = 118/346 (34.10%), Postives = 190/346 (54.91%), Query Frame = 0
Query:  131 VNPKSGKQQAHSIYTAVVAPMLAQADIEHEMVVTMRMQHAKDMIYALDVEAWDGVVAIGGDGLLSDVINGLFSRDPENQRALLELPVAIVNGGTGNGFFSSLLHRQNEAFNPI-------SATFLLLKAKSTLPADLSLVETADGQRHISFLSLSFGLIADVDLESEVIRWAGALRMDLFSLYAIFRSRTYRARLSFWSC---EEGESSFADAIHL----PP------LHTPLPMKNEWISI-EDDFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRLISLFMALEHGDHVPLKEVEIYHAR--AYRLEPLTDQGRYSLDGETIPFGHVQGKI 454
            VNP+SG+ QA  +++  + PML +A + + +V+T    HA+D++   D+  WD +V + GDGLL +V+NGL  R  E+    ++ P+ I+ GG+GN   +S+ H       P+       S  FLL K   T   DL  V  A  QR  SFLSL++G +ADVD+ESE  R  G +R  + +L  +   + Y+ RL++          SS   ++      PP      L  P+P  + W  + E+DF+ +L    SH+AE + +APG    DG   L+ +R  + +SR+ L++LFM +E G H+ +    + + R  A+RLEPL+ +G  ++DGE + +G VQ ++
Sbjct:    4 VNPQSGRGQALQLFSGQIEPMLTEASVPYTLVITEHQNHARDLVRETDLSQWDALVILSGDGLLFEVLNGLLER--EDWEEAIQTPLGILPGGSGNALAASVHHYTKSP--PVWGKELLLSCGFLLCKGLVT-QLDLVSVHLASSQRIFSFLSLAWGFVADVDIESEKYRLVGPMRFLVGTLMRLASLKVYQGRLAYLPAPPFTPQNSSLCSSLPFNQKGPPDSLLADLEQPVP--DHWTVVNEEDFVLVLAMFQSHLAEDLFAAPGAAADDGFIHLLYVR--AGISRLALLTLFMTMEKGGHLAIGCPHLVYERVKAFRLEPLSPEGAITVDGEMVEYGPVQAQV 340          
BLAST of NO04G03140 vs. NCBI_GenBank
Match: XP_011476505.1 (sphingosine kinase 1 [Oryzias latipes])

HSP 1 Score: 191.8 bits (486), Expect = 4.700e-45
Identity = 137/433 (31.64%), Postives = 214/433 (49.42%), Query Frame = 0
Query:   37 LRDVVGSSVIETLDQTQGC-KLLVFAYPRRTDRNCLCGNKRLSLERQAQHLRLTA---PASSV--AKHWDALIKKWCRGGHQGXXXXXXXXXXXXXXXXXVNPKSGKQQAHSIYTAVVAPMLAQADIEHEMVVTMRMQHAKDMIYALDVEAWDGVVAIGGDGLLSDVINGLFSRDPENQRALLELPVAIVNGGTGNGFFSSLLH--RQNEAFNP---ISATFLLLKAKSTLPADLSLVETADGQRHISFLSLSFGLIADVDLESEVIRWAGALRMDLFSLYAIFRSRTYRARLSFWSCEEGESSFADAIHLPPLHTPLPMKNEWISI-EDDFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRLISLFMALEHGDHVPLKEVEIYHA--RAYRLEPLTDQGRYSLDGETIPFGHVQGKILP 456
            LRD VG       D+         + YP +  R     + RLS +R  Q  RL+A   P +++  A+ W   +++  R   Q                  VNP+SGK QA +++ + V  ML +A + H + +T R  HA++++   D+  WD +V + GDGLL +VINGL  R   +    +  P+ I+ GG+GN   +S+ +  R +  F     +S  FLL +     P DL  V    GQR  SFLSL++G +ADVD+ESE  R  GA R  + +L  +     YR +L +               LP    P    ++W+ + E DF+ +L  + SH+AE + +AP   + DG   L  +   + +SR  L+ LF A+E G H+      + HA  RA RLEPL+ +G  ++DGE + +G +Q ++ P
Sbjct:   57 LRDCVGCRAYRKEDKADPAGYFAAYFYPLKRRR----VSSRLSRQRVEQCFRLSALQDPHANLEEAEKWARAVRE--RSARQQQHGDGVLLSRPCRMLLLVNPQSGKGQALALFNSQVKQMLNEAGVTHTLFITERQNHARELVKGADLSQWDALVIMSGDGLLYEVINGLLER--SDWEEAIRTPLGILPGGSGNALAASVHYYSRASPVFGEDLLVSCGFLLCRG-LVFPMDLVSVRFPSGQRLFSFLSLAWGFVADVDVESEKYRHFGAARFTIGTLVRLACLHVYRGKLEY---------------LPAAGPP----DDWVVVQEQDFVLMLAMYQSHLAEDLLAAPDSSLSDGVIHLFYV--TAGISRAALLRLFRAMEKGTHLAAPCQHLVHAKVRALRLEPLSPKGIITVDGEVVEYGPLQAEVHP 459          
The following BLAST results are available for this feature:
BLAST of NO04G03140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_013398401.11.900e-4629.30sphingosine kinase 1 isoform X1 [Lingula anatina][more]
XP_013398402.11.900e-4629.30sphingosine kinase 1 isoform X2 [Lingula anatina][more]
XP_013398403.11.900e-4629.30sphingosine kinase 1 isoform X3 [Lingula anatina][more]
XP_002178970.12.500e-4634.13predicted protein, partial [Phaeodactylum tricornu... [more]
XP_018617591.14.300e-4634.38PREDICTED: LOW QUALITY PROTEIN: sphingosine kinase... [more]
XP_006807867.15.600e-4634.96PREDICTED: sphingosine kinase 2-like [Neolamprolog... [more]
XP_018970320.15.600e-4632.35PREDICTED: LOW QUALITY PROTEIN: sphingosine kinase... [more]
XP_003737537.15.600e-4634.80PREDICTED: sphingosine kinase 1 [Galendromus occid... [more]
CDQ77073.13.600e-4534.10unnamed protein product [Oncorhynchus mykiss][more]
XP_011476505.14.700e-4531.64sphingosine kinase 1 [Oryzias latipes][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL076nonsL076Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR106ngnoR106Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009451NSK009451Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G03140.1NO04G03140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|579004gene_2086Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g79gene1853Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G03140.1NO04G03140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G03140 ID=NO04G03140|Name=NO04G03140|organism=Nannochloropsis oceanica|type=gene|length=1960bp
ATGACTGCGACCACATCTTTCATTGACTACAGGACGCAAAAGgtaaggag
agtatcgcgactggatgatccttgcatgatgcttcaacagagccgactat
acagcccgcaattttcggccaacagcacaccagcagccgtccaccgaacc
cttcaataacaagggttctagcccgccgcatcttctgtttcctagataag
caggcaatccgaaatggtgctgttgaaaccttcgatctgaatcagctcat
ctttgccagtcctgcctcaccgcttggccatgaagtatcaacaaaatcac
ttctctcgttgtccttcaacccacacacatatgatagCTTGTCCGCTTGG
TTATGGACGGCATTGAACCTTATATCGACATCGAGGGCAGTGTGCGCACT
TTGCTTAGGGACGTGGTGGGGTCTTCTGTAATCGAGACTCTCGATCAAAC
GCAAGGCTGCAAGCTCCTCGTGTTCGCCTACCCCCGCAGGACGGATCGGA
ACTGTCTTTGCGGCAACAAACGGCTGTCCTTGGAGCGGCAGGCCCAACAC
CTCAGGTTAACAGCACCAGCATCCAGTGTTGCAAAGCACTGGGACGCGTT
GATCAAGAAATGGTGTCGGGGAGGACACCAGGGTGGTGAGGAAGACACCC
AACTGCAGCGGCGACGGAGACGACTGgtaagaaagcaagcgggtgagtgg
aatgtgaggcggcagaacagaagtctcttttcatttgaagtggaatcaat
tcctacttgcatcgcttcgaaactcctaaatcctatatacagCTCGTTTT
GGTAAATCCGAAGTCAGGAAAGCAGCAAGCACATTCCATCTACACCGCCG
TGGTCGCCCCTATGCTCGCTCAAGCAGACATAGAGCACGAGATGGTCGTG
ACAATGCGCATGCAGCACGCCAAGGATATGATATACGCGCTGGACGTGGA
AGCGTGGGATGGCGTCGTCGCCATAGGAGGAGATGGTCTCCTTAGCGATG
TTATTAATGGGCTTTTCTCTCGTGACCCTGAAAACCAACGCGCCCTTTTG
GAGCTTCCGGTGGCCATTGTTAACGGTGGTACAGGAAACGGATTCTTCTC
TTCCCTTCTTCACCGGCAAAACGAGGCCTTCAATCCAATCTCTGCCACTT
TCCTTTTGCTAAAAGCAAAGTCTACATTGCCTGCGGACCTCTCGCTCGTC
GAGACGGCAGATGGCCAGCGGCACATCAGCTTTCTGTCCCTCTCTTTCGG
GCTTATAGCCGACGTTGATTTGGAAAGTGAAGTAATTAGGTGGGCAGGGG
CGTTACGAATGGACTTATTCTCTCTCTACGCTATTTTTAGGAGTAGGACA
TACCGCGCCCGGCTTAGTTTTTGGTCATGCGAGGAGGGAGAAAGCTCCTT
CGCCGACGCCATTCATCTACCGCCGCTACACACGCCGCTCCCAATGAAGA
ACGAATGGATCAGCATAGAGGATGATTTTTTAACGgtacgtgcgaagggt
gcgatatgcatagagagcggacggaataatttaatcgagggtgataagct
gtgtcattgacaagagggccagttattcccctactgtgcgtcactcacat
acaactgtctgttcattcccaccccttcaaaaaacatagATATTGATCTC
GCATGTGAGTCATATCGCAGAAGCGGTGCATTCAGCACCTGGGAAGAAGA
TGGGCGACGGGACTTTCCAGCTTATGGTATTACGCCGGCAGTCTTCTCTC
TCTCGCATGCGGCTCATTTCTCTCTTCATGGCACTGGAGCACGGGGACCA
CGTACCTTTAAAGGAAGTGGAAATTTATCATGCCCGGGCATATCGGCTGG
AGCCCTTGACAGATCAGGGACGCTACTCGCTCGATGGAGAGACCATCCCC
TTTGGACACGTGCAAGGCAAGATCCTTCCTCTCGCCCTGCAAGTACTCTG
CGATTCGTAG
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protein sequence of NO04G03140.1

>NO04G03140.1-protein ID=NO04G03140.1-protein|Name=NO04G03140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=465bp
MTATTSFIDYRTQKLVRLVMDGIEPYIDIEGSVRTLLRDVVGSSVIETLD
QTQGCKLLVFAYPRRTDRNCLCGNKRLSLERQAQHLRLTAPASSVAKHWD
ALIKKWCRGGHQGGEEDTQLQRRRRRLLVLVNPKSGKQQAHSIYTAVVAP
MLAQADIEHEMVVTMRMQHAKDMIYALDVEAWDGVVAIGGDGLLSDVING
LFSRDPENQRALLELPVAIVNGGTGNGFFSSLLHRQNEAFNPISATFLLL
KAKSTLPADLSLVETADGQRHISFLSLSFGLIADVDLESEVIRWAGALRM
DLFSLYAIFRSRTYRARLSFWSCEEGESSFADAIHLPPLHTPLPMKNEWI
SIEDDFLTILISHVSHIAEAVHSAPGKKMGDGTFQLMVLRRQSSLSRMRL
ISLFMALEHGDHVPLKEVEIYHARAYRLEPLTDQGRYSLDGETIPFGHVQ
GKILPLALQVLCDS*
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Synonyms
Publications