NO04G03000, NO04G03000 (gene) Nannochloropsis oceanica

Overview
NameNO04G03000
Unique NameNO04G03000
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1540
Alignment locationchr4:795344..796883 +

Link to JBrowse

Properties
Property NameValue
DescriptionMitochondrial substrate carrier family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:795344..796883 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023395Mt_carrier_dom
IPR018108Mitochondrial_sb/sol_carrier
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Homology
BLAST of NO04G03000 vs. NCBI_GenBank
Match: XP_010536175.1 (PREDICTED: solute carrier family 25 member 44 [Tarenaya hassleriana])

HSP 1 Score: 110.9 bits (276), Expect = 8.400e-21
Identity = 96/352 (27.27%), Postives = 154/352 (43.75%), Query Frame = 0
Query:    2 TLDVSNLGQTEWQDLDVKKLLIISSFATVFENSIYWPMWAMKTRQQVQTGAV---TQSLSIRSMGGIRSLYKGFLFYAVASLPAYLVYISTYTYAKSALGLHYDSSPANGFPAETVPEPSFQQTMAPMFAGFIADAACLALYIPVEIVAQRLQL--------------PTRYSGVQQVLTDMWREDGVRTFYRGFGATLVTSGIASGVWWQSYESF-KSLFTVLAREHIPPSKPNPTPVPESAVLSPFSSTERMLEQVADVLATIRQSLPHMAAGLFAGGLSALATNPFDVAKTRLQTQHVKPG----PLTYIRSLKTILQTEGLRQSFLRGLAPKLVSSAPLGMLSSVIYE 332
            T  V      +WQ LD  K   + +      +S+ +P+  +KTRQQV    +   + SL+I    G+R  YKGF    + ++PA  +Y++     KS++G    ++   GF   T         +A   AG  +  A   ++ P+++V+QRL +                RY+        + R DG R FYRGFG +++T   ++ VWW SY +  +S+++ L   ++   K            S  SS  RM  Q               A+   A G SAL T P D  KTRLQ   V+      P+T  ++++ +++  GL   + RGL P+ VS +         YE
Sbjct:   16 TSQVHMPADVDWQMLDKSKFFFLGAALFSGVSSVLYPIVVLKTRQQVSPARISCASMSLAIARFEGLRGFYKGFGTSLIGTVPARALYMAALEITKSSVG---QATLRLGFSDTTA------VAVASGAAGLSSAMAAQLVWTPIDVVSQRLMVQGNVALNKHIPSVSSCRYANGMDAFRKILRTDGPRGFYRGFGISILTYAPSNAVWWASYSTAQRSIWSGLRCNNLGQEKD-----------SDVSSKARMAVQA--------------ASAAIASGCSALITMPLDTIKTRLQVLDVEDNGRRRPMTVFQAVRNLMKEGGLGACY-RGLGPRWVSMSMSATTMITTYE 332          
BLAST of NO04G03000 vs. NCBI_GenBank
Match: EFJ28151.1 (hypothetical protein SELMODRAFT_451413 [Selaginella moellendorffii])

HSP 1 Score: 109.0 bits (271), Expect = 3.200e-20
Identity = 92/334 (27.54%), Postives = 149/334 (44.61%), Query Frame = 0
Query:   10 QTEWQDLDVKKLLIISSFATVFENSIYWPMWAMKTRQQVQTGAVTQS------LSIRSMGGIRSLYKGFLFYAVASLPAYLVYISTYTYAK-SALGLHYDSSPANGFPAETVPEPSFQQTMAPMFAGFIADAACLALYIPVEIVAQRLQL-----PTRYSGVQQVLTDMWREDGVRTFYRGFGATLVTSGIASGVWWQSYESFKSLFTVLAREHIPPSKPNPTPVPESAVLSPFSSTERMLEQVADVLATIRQSLPHMAAGLFAGGLSALATNPFDVAKTRLQTQHVKPGPLTYIRSLKTILQTEGLRQSFLRGLAPKLVSSAPLGMLSSVIYE 332
            +  W  LD  K  ++ +      ++  +P+  +KTR QV  G            SI S  G+R LY+GF      ++P+ +V+++T    K +AL L   +S  N FP  T         +A   AGF++      +++P+++V+QRL +      T+Y+G    +  + + DG+R  YRGFG +++T    SGVWW SY + + +F                       L     T ++  Q   VL          A GL A   ++  T PFD  KTRLQ    +  P T + + + +LQ +G +    RGL P+ +S    G    + YE
Sbjct:   46 EINWDRLDKTKFYLVGAGLFSGVSAALYPITVVKTRMQVARGEAVNMKAPAIVRSILSTDGVRGLYRGFGTVVAGTVPSRVVFLTTLETTKIAALNL---TSKLN-FPDTTA------AAIANGAAGFLSSVVSQFIFVPLDVVSQRLMVQGTPGSTKYAGGIDAVRQIVKADGIRGLYRGFGMSVITYSPTSGVWWASYGTSQRVFW--------------------RALGYTEETHKIPSQSEMVLV-------QAAGGLVAAACASALTAPFDTIKTRLQVLSSEGNP-TVVGTARQLLQDDGWK-GLYRGLVPRFLSMTLWGSAMIISYE 340          
BLAST of NO04G03000 vs. NCBI_GenBank
Match: XP_024530279.1 (solute carrier family 25 member 44 [Selaginella moellendorffii] >XP_024530280.1 solute carrier family 25 member 44 [Selaginella moellendorffii])

HSP 1 Score: 109.0 bits (271), Expect = 3.200e-20
Identity = 92/334 (27.54%), Postives = 149/334 (44.61%), Query Frame = 0
Query:   10 QTEWQDLDVKKLLIISSFATVFENSIYWPMWAMKTRQQVQTGAVTQS------LSIRSMGGIRSLYKGFLFYAVASLPAYLVYISTYTYAK-SALGLHYDSSPANGFPAETVPEPSFQQTMAPMFAGFIADAACLALYIPVEIVAQRLQL-----PTRYSGVQQVLTDMWREDGVRTFYRGFGATLVTSGIASGVWWQSYESFKSLFTVLAREHIPPSKPNPTPVPESAVLSPFSSTERMLEQVADVLATIRQSLPHMAAGLFAGGLSALATNPFDVAKTRLQTQHVKPGPLTYIRSLKTILQTEGLRQSFLRGLAPKLVSSAPLGMLSSVIYE 332
            +  W  LD  K  ++ +      ++  +P+  +KTR QV  G            SI S  G+R LY+GF      ++P+ +V+++T    K +AL L   +S  N FP  T         +A   AGF++      +++P+++V+QRL +      T+Y+G    +  + + DG+R  YRGFG +++T    SGVWW SY + + +F                       L     T ++  Q   VL          A GL A   ++  T PFD  KTRLQ    +  P T + + + +LQ +G +    RGL P+ +S    G    + YE
Sbjct:   13 EINWDRLDKTKFYLVGAGLFSGVSAALYPITVVKTRMQVARGEAVNMKAPAIVRSILSTDGVRGLYRGFGTVVAGTVPSRVVFLTTLETTKIAALNL---TSKLN-FPDTTA------AAIANGAAGFLSSVVSQFIFVPLDVVSQRLMVQGTPGSTKYAGGIDAVRQIVKADGIRGLYRGFGMSVITYSPTSGVWWASYGTSQRVFW--------------------RALGYTEETHKIPSQSEMVLV-------QAAGGLVAAACASALTAPFDTIKTRLQVLSSEGNP-TVVGTARQLLQDDGWK-GLYRGLVPRFLSMTLWGSAMIISYE 307          
BLAST of NO04G03000 vs. NCBI_GenBank
Match: XP_024531472.1 (solute carrier family 25 member 44 [Selaginella moellendorffii] >XP_024531473.1 solute carrier family 25 member 44 [Selaginella moellendorffii])

HSP 1 Score: 109.0 bits (271), Expect = 3.200e-20
Identity = 92/334 (27.54%), Postives = 149/334 (44.61%), Query Frame = 0
Query:   10 QTEWQDLDVKKLLIISSFATVFENSIYWPMWAMKTRQQVQTGAVTQS------LSIRSMGGIRSLYKGFLFYAVASLPAYLVYISTYTYAK-SALGLHYDSSPANGFPAETVPEPSFQQTMAPMFAGFIADAACLALYIPVEIVAQRLQL-----PTRYSGVQQVLTDMWREDGVRTFYRGFGATLVTSGIASGVWWQSYESFKSLFTVLAREHIPPSKPNPTPVPESAVLSPFSSTERMLEQVADVLATIRQSLPHMAAGLFAGGLSALATNPFDVAKTRLQTQHVKPGPLTYIRSLKTILQTEGLRQSFLRGLAPKLVSSAPLGMLSSVIYE 332
            +  W  LD  K  ++ +      ++  +P+  +KTR QV  G            SI S  G+R LY+GF      ++P+ +V+++T    K +AL L   +S  N FP  T         +A   AGF++      +++P+++V+QRL +      T+Y+G    +  + + DG+R  YRGFG +++T    SGVWW SY + + +F                       L     T ++  Q   VL          A GL A   ++  T PFD  KTRLQ    +  P T + + + +LQ +G +    RGL P+ +S    G    + YE
Sbjct:   16 EINWDRLDKTKFYLVGAGLFSGVSAALYPITVVKTRMQVARGEAVNMKAPAIVRSILSTDGVRGLYRGFGTVVAGTVPSRVVFLTTLETTKIAALNL---TSKLN-FPDTTA------AAIANGAAGFLSSVVSQFIFVPLDVVSQRLMVQGTPGSTKYAGGIDAVRQIVKADGIRGLYRGFGMSVITYSPTSGVWWASYGTSQRVFW--------------------RALGYTEETHKIPSQSEMVLV-------QAAGGLVAAACASALTAPFDTIKTRLQVLSSEGNP-TVVGTARQLLQDDGWK-GLYRGLVPRFLSMTLWGSAMIISYE 310          
BLAST of NO04G03000 vs. NCBI_GenBank
Match: XP_013758188.1 (solute carrier family 25 member 44 [Thecamonas trahens ATCC 50062] >KNC49167.1 solute carrier family 25 member 44 [Thecamonas trahens ATCC 50062])

HSP 1 Score: 108.6 bits (270), Expect = 4.100e-20
Identity = 99/364 (27.20%), Postives = 155/364 (42.58%), Query Frame = 0
Query:   13 WQDLDVKKLLIISSFATVFENSIYWPMWAMKTRQQVQ------TGAVTQSLSIRSMGGIRSLYKGFLFYAVASLPAYLVYISTYTYAKSALGLHYDSSPANGFPAETV------PEPSFQQTMAPMFAGFIADAACLALYIPVEIVAQRLQLPTR------------YSGVQQVLTDMWREDGVRTFYRGFGATLVTSGIASGVWWQSYESFKSLFTVLAREHIPPSKPNPTPVPESAVLSPFSSTERMLEQVADVLATIRQSLPHMAAGLFAGGLSALATNPFDVAKTRLQ-------------TQHVKPGPLTYIRSLKTILQTEGLRQSFLRGLAPKLVSSAPLGMLSSVIYEGILFWSRK 340
            W DLD  KL   S        +  +P++ +KTR Q Q      +G V+   +I +  G+  LYKG L      +PA  +Y++TY       GL    +PA   P  T+       +    Q +     G  A  A LA  +P+++V+QRLQ+ ++            YS    V+ D+ R +G+R  YRG  AT++++  +SG+WW SY   K                     P +A        +  L               H+ AG  AG ++  +TNP DV +TRLQ              +  +P P +     +T+ Q E L   + +GL P+L +S+ +G+L    YE I   +RK
Sbjct:   58 WDDLDKAKLFGYSVVVFAALRAAVYPLFLLKTRLQAQQQQRAYSGVVSGVRAIVASEGVAGLYKGLLTMVAGVVPAQTLYVATYE------GLR---APATLAPLLTLVGLDVHADAEAVQALRNGIGGLGAGLASLAAVVPIDVVSQRLQMQSKTLAGAVVGGSRSYSSGLAVVMDVLRNEGLRGLYRGTVATMLSTVPSSGIWWSSYTLIK---------------------PRAARAFGLEYDDIRL---------------HVVAGTLAGVVATTSTNPLDVIRTRLQIDVSNYASAAGSGREGTRPQP-SIASIARTLYQQESLASLWTKGLGPRLWTSSIMGILMVAAYERIKILARK 375          
BLAST of NO04G03000 vs. NCBI_GenBank
Match: XP_005831035.1 (mitochondrial carrier protein [Guillardia theta CCMP2712] >EKX44055.1 mitochondrial carrier protein [Guillardia theta CCMP2712])

HSP 1 Score: 108.2 bits (269), Expect = 5.400e-20
Identity = 94/357 (26.33%), Postives = 156/357 (43.70%), Query Frame = 0
Query:   13 WQDLDVKKLLIISSFATVFENSIYWPMWAMKTRQQVQTGA--------VTQSLSIRSMGGIRSLYKGFLFYAVASLPAYLVYISTYTYAKSALGLHYDSSPANGFPAETVPEPSFQQTMAPMFAGFIADAACLALYIPVEIVAQRLQLP-------------------TRYSGVQQVLTDMWREDGVRTFYRGFGATLVTSGIASGVWWQSYESFKSLFTVLAREHIPPSKPNPTPVPESAVLSPFSSTERMLEQVADVLATIRQSLP-HMAAGLFAGGLSALATNPFDVAKTRLQTQHVKPGPLTYIRSLKTILQTEGLRQSFLRGLAPKLVSSAPLGMLSSVIYEGILFWSRKDS 342
            W+D  +  LL   S   + E  + +P   +KTR QV            +     I    G+   ++GF F   A +PA L Y+ TY + K  +          G   E   E      +AP+ AG +A+      ++P++++ Q++Q+                    +++ G   V+ D+ +EDGV   +RG GA ++     + VWW SYE  K +   LAR             P++                        Q +P H+ AG+ AG ++A+ TNP D  K R+QT+ +  G   +  ++  ++++EG+  S  +GLAPKL  + P+  LSSV YE I+  S+  S
Sbjct:   51 WKDTSLPHLLGYGSALYIVEQLLMYPSDLLKTRLQVDLRPTNKLWKDWIVLCRHIYGREGMYGFFRGFGFNTFAGIPAQLAYLVTYNWCKEKV---------EGLGGEKWKE----SPIAPLCAGALAEGLTSCFWVPLDVIVQKIQIQGGLPPSWEKGSGPAHRPVGSQFKGALSVVKDVIKEDGVFGLWRGTGAHILAFVPQAAVWWASYEQSKQM---LARR-----------APDAV-----------------------QGMPIHLTAGMIAGAVNAIVTNPLDTMKVRVQTK-IGTGTSGW-NTITQMVKSEGV-SSLGKGLAPKLWMAVPVSALSSVCYELIMSLSKVKS 354          
BLAST of NO04G03000 vs. NCBI_GenBank
Match: KJE92751.1 (hypothetical protein, variant [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 108.2 bits (269), Expect = 5.400e-20
Identity = 96/343 (27.99%), Postives = 151/343 (44.02%), Query Frame = 0
Query:   40 WAMKTRQQVQTGAVTQSLSIRSMGGIRSLYKGFLFYAVASLPAYLVYISTYTYAKS-ALGLHYDSSPANGFPAETVPEPSFQQTMAPMFAGFIADAACLALYIPVEIVAQRLQLPTRY--SGVQQVLTDMWREDGVRTFYRGFGATLVTSGIASGVWWQSYESFKS----LFTVLAREHIPPSKPNPTP----------------------------VPESAVLSPFSSTERMLEQVADVLATIRQSLPHMAAGLFAGGLSALATNPFDVAKTRLQTQHVKPGPLTYIRS------LKTILQTEGLRQSFLRGLAPKLVSSAPLGMLSSVIYEGILFWSRKDS 342
            W      +V+   + + ++ R   G    +KGF     ++ P   +Y  +Y + K   LG        N    E +      +  A   AGF+ADA+ L +Y+P +IV+QRLQ+      +    V+  +WR +G+R FYRG G T+ T  + S +WW +YE FK+    LF V +R  +P S  +  P                            VP  + + P S +E      A  +   R    HM AG  AG +S + +NP DVAKTR+Q    K       R        + I +TEG+R    +G+ P+++ S P   L+ + YE +   SR ++
Sbjct:   32 WGQIINVRVKLADMVKGIARRE--GFFGFFKGFNATLASAYPGQALYFISYEFYKDHLLGFASRHQTNNSMLNEAM------EFGAHAAAGFLADASSLVIYVPSDIVSQRLQVVEDRVPASSVDVVRRIWRAEGIRGFYRGVGVTVATYSVGSAIWWATYEMFKTPMGRLFGV-SRNGLPLSSTDAAPXXXXXXXXXXXXXXXXXXXXXXXXXXSLVPGLSHIQP-SVSEATSSSSAPPVHDWRYHSTHMTAGALAGLVSGVLSNPLDVAKTRMQVPEYKSHSEASAREHKFLPVFRGIYKTEGIR-GLYKGIVPRILISMPCSALTFLGYEYVKRMSRLET 363          
BLAST of NO04G03000 vs. NCBI_GenBank
Match: XP_003285745.1 (hypothetical protein DICPUDRAFT_76676 [Dictyostelium purpureum] >EGC37724.1 hypothetical protein DICPUDRAFT_76676 [Dictyostelium purpureum])

HSP 1 Score: 107.5 bits (267), Expect = 9.200e-20
Identity = 89/343 (25.95%), Postives = 156/343 (45.48%), Query Frame = 0
Query:   12 EWQDLDVKKLLIISSFATVFENSIYWPMWAMKTRQQVQ-TGAVTQSL-----------SIRSMGGIRSLYKGFLFYAVASLPAYLVYISTYTYAKSALGLHYDSSPANGFPAETVPEPSFQQTMAPMFAGFIADAACLALYIPVEIVAQRLQL-----PTRYSGVQQVLTDMWREDGVRTFYRGFGATLVTSGIASGVWWQSYESFK---SLFTVLAREHIPPSKPNPTPVPESAVLSPFSSTERMLEQVADVLATIRQSLPHMAAGLFAGGLSALATNPFDVAKTRLQTQHVKPGPL-TYIRSLKTILQTEGLRQSFLRGLAPKLVSSAPLGMLSSVIYEGI 334
            +W DLD KK    +       + + +P+  ++TR QVQ +  +TQS             +  + G ++LYKGFL   +  L +  +Y  +Y  +K  +   ++         E+  +  F  T+    +G I++A    +++P ++  Q +Q+       +Y     V   +++E G+R  Y+GFGAT++ +   SG+WW +YE  K   + F +  + H+         V E+                          + H  +G FA   +   TNP DVAKTRLQT    P     +   +K+ ++ EG+R +  +GL P L++SAP  M+S  +YE +
Sbjct:   21 QWDDLDPKKYYFYNFLLGGSIDLLMYPLDVIRTRLQVQGSHNITQSFPQYNGTMDGFRKLVGLEGKKALYKGFLTSELGYLTSRGIYFGSYEISKQTIRKFFNKD------LESDSDLFFVTTV----SGAISEALASFVWVPFDVATQTVQIQGSLQEPKYKPGLGVFQKIYQEKGMRGLYKGFGATMIRNVPYSGIWWGTYEMSKLKLTEFNIREKLHMKERTGKVLSVHETXXXXXXXXXXXXXXXXE---VENEDPIIHFFSGFFAAVFATTITNPLDVAKTRLQTGSFGPNERPNFYTIIKSTIKKEGVR-ALWKGLVPSLLTSAPYSMISIFLYEEV 349          
BLAST of NO04G03000 vs. NCBI_GenBank
Match: XP_020224068.1 (solute carrier family 25 member 44-like [Cajanus cajan] >KYP58409.1 Solute carrier family 25 member 44 [Cajanus cajan])

HSP 1 Score: 107.5 bits (267), Expect = 9.200e-20
Identity = 98/342 (28.65%), Postives = 160/342 (46.78%), Query Frame = 0
Query:   10 QTEWQDLDVKKLLIISSFATVFENSIYWPMWAMKTRQQV---QTGAVTQSLSIRSMGGIRSLYKGFLFYAVASLPAYLVYISTYTYAKSALGLHYDSSPANGFPAETVPEPSFQQTMAPMFAGFIADAACLALYIPVEIVAQRLQL-------PTRYSGVQQVLTDMWREDGVRTFYRGFGATLVTSGIASGVWWQSYESFKSLFTVLAREHIPPSKPNPTPVPESAVLSPFSSTERMLEQVADVLATIRQSLPHMAAGLFAGGLSALATNPFDVAKTRLQT-QHVKPGPLTYIRSLKTILQTEGLRQSFLRGLAPKLVSSAPLGMLSSVIYEGILFWSRKD 341
            + +WQ LD  K   + +      ++  +P+  +KTRQQV   Q  ++  +  +  M G R+LY+GF    + ++PA  +Y++     KS +G    ++   GF   T        T+A   AG  A  A   ++ PV++V+QRL +        T+Y         + + DG R  YRGFG +++T   ++ VWW SY   + +     R ++   K N     ES  L P S   +++  V  V A +            AGG+SAL T PFD  KTRLQ   H + GP T +++++ +++ EG   +  RGL P+  S +         YE +   S K+
Sbjct:   20 EIDWQKLDKSKFFCLGAALFSVVSATLYPVVVLKTRQQVTPSQLSSIKNAFWLIRMEGFRALYRGFGTSLMGTIPARALYMAALEITKSNVG---TATIRLGFAEHTA------ATIANAAAGLSAAMAAQLVWTPVDVVSQRLMVQSGVSSSSTQYVNGIDAFRKIVKSDGARGLYRGFGLSILTYAPSNAVWWASYSVAQRMVWGGVRWYL--CKKNGG--GESEYLRPNS---KLVMGVQGVSAAM------------AGGMSALITMPFDTIKTRLQVLDHGRRGP-TVVQTVRNLVR-EGGWMACYRGLGPRWASMSVSATTMITTYEFVKRLSTKN 331          
BLAST of NO04G03000 vs. NCBI_GenBank
Match: PNT40768.1 (hypothetical protein POPTR_004G117000v3 [Populus trichocarpa])

HSP 1 Score: 107.1 bits (266), Expect = 1.200e-19
Identity = 105/357 (29.41%), Postives = 162/357 (45.38%), Query Frame = 0
Query:    6 SNLGQTE--WQDLDVKKLLIISSFATVFENSIYWPMWAMKTRQQVQT-GAVTQSLS-----IRSMGGIRSLYKGFLFYAVASLPAYLVYISTYTYAKSALGLHYDSSPANGFPAETVPEPSFQQTMAPMFAGFIADAACLALYIPVEIVAQRLQLP-----TRYSGVQQVLTDMWREDGVRTFYRGFGATLVTSGIASGVWWQSYESFKSLFTVLAREHIPPSKPNPTPVPESAVLSPFSSTERMLEQVADVLATIRQSLPHMAAGLFAGGLSALATNPFDVAKTRLQTQ-HVKPGPLTYIRSLKTILQTEGLRQSFLRGLAPKLVSSAPLGMLSSVIYEGIL--FWSRKDSSEWKS 347
            S+LGQTE  W  LD  K  ++ +          +P+  +KTR QV T  +V +S S     I    G+  LY+GF      ++PA +++++     K       +  P N        EP+ Q  +A   AG  A     A+++P+++++QRL +       +Y+G   V   + R DG+R FYRGFG +++T   +S VWW SY S + +   L  +                       T+R  E+ A   +TI   L     G+ AG  ++  T P D  KTRLQ   H +    +  R + T L  +     F RGL P+ VS +  G    + YE ++   WS KD+S WKS
Sbjct:    4 SSLGQTEINWDKLDKSKFYVVGAGIFTGLTVGLYPVSVIKTRLQVATRDSVEKSASSVIRGILKTDGVPGLYRGFGTVITGAVPARIIFLTALETTKVTAFKMVE--PFN------FSEPT-QAALANGIAGMAASLCSQAVFVPIDLISQRLMVQGYSGHEKYNGGLDVARKIIRTDGIRGFYRGFGLSVMTYSPSSAVWWASYGSSQRIIWRLLGQ----------------------GTDR--EEAAPSKSTI--MLVQATGGIIAGATASCITTPLDTIKTRLQVMGHER---RSSARQIVTNLIRDDGWTGFYRGLGPRFVSMSAWGTTMILAYEYLIPQIWS-KDAS-WKS 320          
The following BLAST results are available for this feature:
BLAST of NO04G03000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_010536175.18.400e-2127.27PREDICTED: solute carrier family 25 member 44 [Tar... [more]
EFJ28151.13.200e-2027.54hypothetical protein SELMODRAFT_451413 [Selaginell... [more]
XP_024530279.13.200e-2027.54solute carrier family 25 member 44 [Selaginella mo... [more]
XP_024531472.13.200e-2027.54solute carrier family 25 member 44 [Selaginella mo... [more]
XP_013758188.14.100e-2027.20solute carrier family 25 member 44 [Thecamonas tra... [more]
XP_005831035.15.400e-2026.33mitochondrial carrier protein [Guillardia theta CC... [more]
KJE92751.15.400e-2027.99hypothetical protein, variant [Capsaspora owczarza... [more]
XP_003285745.19.200e-2025.95hypothetical protein DICPUDRAFT_76676 [Dictyosteli... [more]
XP_020224068.19.200e-2028.65solute carrier family 25 member 44-like [Cajanus c... [more]
PNT40768.11.200e-1929.41hypothetical protein POPTR_004G117000v3 [Populus t... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL081nonsL081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR111ngnoR111Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009517NSK009517Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G03000.1NO04G03000.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578942gene_2071Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g22gene1910Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G03000.1NO04G03000.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G03000 ID=NO04G03000|Name=NO04G03000|organism=Nannochloropsis oceanica|type=gene|length=1540bp
ATGACCCTTGACGTTTCCAACCTGGGACAGACGGAGTGGCAAGATCTGGA
CGTGAAGAAGCTATTGATCATCTCCTCTTTTGCCACTGgtaagtttgcac
ttcattctccaacgcatacacaaacatatgtaccaaaggtgggcacacgg
cctctgtcgggctgtggagccggcagggagcgtagcatatcattcgtatg
tgtcgtgtggcgaagatttgaagatttgtgcacctgtaatttcaaagtgc
ataccttgtttggggggaaggcgcatcttacccataggtgacagcaatgc
ccacccataaatgaaatacttgcctatgtgcccgagtctgatgttgacct
tctcgccaacccgcttacccaactcagTATTCGAAAACTCGATATATTGG
CCTATGTGGGCGATGAAGACTCGGCAGCAAGTGCAGACCGGGGCCGTCAC
TCAGTCCCTGAGCATTCGCAGCATGGGAGGTATCAGGTCACTCTACAAGG
GCTTCCTCTTCTATGCCGTCGCGAGCCTCCCAGCCTATTTAGTATATATC
AGCACATACACCTACGCTAAGAGTGCTCTGGGCTTGCATTATGATTCCAG
TCCTGCCAACGGCTTTCCTGCCGAAACGGTTCCTGAGCCGTCCTTCCAGC
AAACTATGGCTCCCATGTTTGCCGGGTTTATTGCGGACGCGGCCTGCTTG
GCTCTTTACATACCAGTGGAGATTGTAGCGCAGCGCTTGCAACTTCCCAC
GCGATATTCGGGCGTGCAGCAGGTTCTGACAGACATGTGGCGAGAAGACG
gtaagtggaaagaggaagtaagggcatacggggaaagatgaaacaagagg
ggacatttctgcggtatgagagtttctcacaagcagtgatatttaaactc
tgaccccatatgcaaccgtctctgtctccccccgcacactttcgcagGTG
TGCGCACTTTCTACCGAGGTTTCGGGGCGACTCTTGTTACCTCTGGCATT
GCGTCTGGCGTCTGGTGGCAGAGTTATGAGTCCTTTAAATCCCTATTTAC
CGTCCTGGCTCGCGAGCACATCCCCCCATCCAAACCAAACCCTACACCCG
TACCTGAATCTGCGGTCTTGTCTCCTTTCTCGTCGACAGAGCGCATGCTT
GAGCAAGTCGCTGACGTTTTGGCAACGATCCGCCAGTCCCTTCCTCACAT
GGCCGCCGGCTTGTTCGCCGGGGGATTGAGTGCCCTGGCGACAAATCCTT
TTGATGTGGCCAAGACGAGGCTGCAGACCCAGCATGTGAAGCCTGGACCG
TTGACTTATATTAGGAGCTTGAAGACCATTTTGCAAACAGAGGGGTTACG
TCAATCTTTTTTGCGGGGCCTTGCGCCTAAGCTGGTGTCAAGCGCACCGC
TTGGGATGCTATCTTCCGTCATCTATGAGGGAATCTTGTTTTGGAGTCGG
AAAGACAGCAGCGAATGGAAAAGTTATGGTGCTAGCACCGAAACTGCCGA
GAAGAAGAAGAAAACAACTGCGGGGGAGAAGGAGATGTAG
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protein sequence of NO04G03000.1

>NO04G03000.1-protein ID=NO04G03000.1-protein|Name=NO04G03000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=368bp
MTLDVSNLGQTEWQDLDVKKLLIISSFATVFENSIYWPMWAMKTRQQVQT
GAVTQSLSIRSMGGIRSLYKGFLFYAVASLPAYLVYISTYTYAKSALGLH
YDSSPANGFPAETVPEPSFQQTMAPMFAGFIADAACLALYIPVEIVAQRL
QLPTRYSGVQQVLTDMWREDGVRTFYRGFGATLVTSGIASGVWWQSYESF
KSLFTVLAREHIPPSKPNPTPVPESAVLSPFSSTERMLEQVADVLATIRQ
SLPHMAAGLFAGGLSALATNPFDVAKTRLQTQHVKPGPLTYIRSLKTILQ
TEGLRQSFLRGLAPKLVSSAPLGMLSSVIYEGILFWSRKDSSEWKSYGAS
TETAEKKKKTTAGEKEM*
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Synonyms
Publications