NO04G02810, NO04G02810 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G02810 vs. NCBI_GenBank
Match: EWM28684.1 (cdc25 protein [Nannochloropsis gaditana]) HSP 1 Score: 619.4 bits (1596), Expect = 1.000e-173 Identity = 335/541 (61.92%), Postives = 383/541 (70.79%), Query Frame = 0
Query: 1 MDEAPPKPTVMKKMKAIKRRSVEAIFQKIGVSDGTIDTEFEDCKRRFDRTIRELGELSQGMGAFLDKSRDLYGTGVDLGGTAYEYYWGRLMMDWPPGTPSALRSHPAAAQYKQAWWHCNEAVRRSTTKMWLDQGLTPLRAFVSEVVPEIQHEADLREAYVKDYDSYRRRFNSLQDKQAKYAAAPPSANGGPNPRLAEVEKALYQIQSKLHAAEDRYRRQNSKIKEEMIKAKLMRDELLENAMRAAIVSQVELFTRTGEHLAQLLGALPEEEKVISLQKQIKALVAEGGPEARPVEMSQMGKMVKA----VTNNFTPRT---------PPSPTTSADGAPFKSTPPGPSVVDQYNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFTNFFNRQSVGGVEANKGGNLTAAAGNQGVADGYETMDSSSGAPKFDETVPLEVAAVAAVDASPTPPVMARALYDNEPEDETELGFVVGDLLEILTKDDSGWWEARLNGKVGSIPANYVELL 529
MD P KPTVMKKMKAIKRR VEAIFQKIGVSDGT+DTE+EDCK+RFDRTIRELGELSQGMGAFLDKS+DL+G G+DLGGT YEYYWGRLMMDWPPGTP+ALRSHPAAAQYKQAW HCNE VRRS K+WLDQGLT LRAF++++VPEIQHEADLREAYVKDYDSYRRRFN+LQDKQ KYAAAP ANG PN RLAEVEKALYQIQSKLHAAEDRYRRQN+KIK+EM+KAKL RDELLE ++R + Q ELF +TGEHL+QLL +LPEEEKV SL+ Q+K LVA GGPEARPVE+SQM K+VKA VT FTPR+ PP+ ++ D P + P P F++FF+RQS G +A+KGG T A A GY+ M SS+GA D+ +PL +A A ++S PV ARALYDNE EDETEL F+VGDL+EIL KDDSGWW+ARLNGKVGSIPANYVE++
Sbjct: 1 MDAPPAKPTVMKKMKAIKRRGVEAIFQKIGVSDGTLDTEYEDCKQRFDRTIRELGELSQGMGAFLDKSKDLFGVGMDLGGTVYEYYWGRLMMDWPPGTPNALRSHPAAAQYKQAWTHCNETVRRSVAKVWLDQGLTRLRAFIADIVPEIQHEADLREAYVKDYDSYRRRFNALQDKQVKYAAAPAPANGAPNHRLAEVEKALYQIQSKLHAAEDRYRRQNAKIKDEMLKAKLFRDELLETSLRTVLACQAELFCQTGEHLSQLLKSLPEEEKVESLRTQVKDLVAAGGPEARPVELSQMEKLVKAVTATVTTTFTPRSPSPVHPGAMPPASQSALDHQPAQGGQPTP--------------------------------VTNASQSGPPKSPHKPTSSALVASGGGLNGNSEGGRTSGMFSSFFSRQSSRG-DASKGGGSTTAGAGLSTATGYDKMGSSNGAAHMDDALPLPMATAAPPNSS-QKPVFARALYDNEAEDETELAFMVGDLIEILAKDDSGWWDARLNGKVGSIPANYVEVI 507
BLAST of NO04G02810 vs. NCBI_GenBank
Match: KMR03302.1 (unconventional myosin-ie-like protein [Lasius niger]) HSP 1 Score: 73.6 bits (179), Expect = 2.100e-9 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 0
Query: 441 ETMDSSSGAPKFDETVPLEVAAVAAVDASPTPPVM--ARALYDNEPEDETELGFVVGDLLEILTKDDSGWWEARLNGKVGSIPANYVE 527
+T D+ + ++ + VA PTPP + +ALYD EP+D ELG GD+LE+L + + GWW RL GK G P+NYVE
Sbjct: 569 QTNDALDRVRRKEDNIAYAVANRKMPPQKPTPPSLPKVKALYDYEPQDLDELGLREGDILEVLKEHEGGWWHGRLKGKTGLFPSNYVE 656
BLAST of NO04G02810 vs. NCBI_GenBank
Match: XP_013759812.1 (SH3 and FCH domain-containing protein [Thecamonas trahens ATCC 50062] >KNC47032.1 SH3 and FCH domain-containing protein [Thecamonas trahens ATCC 50062]) HSP 1 Score: 73.6 bits (179), Expect = 2.100e-9 Identity = 30/55 (54.55%), Postives = 40/55 (72.73%), Query Frame = 0
Query: 472 PPVMARALYDNEPEDETELGFVVGDLLEILTKDDSGWWEARLNGKVGSIPANYVE 527
P V A ALYD E + + EL F GD+L +L +DDSGWWEA LNG +G +P+NY++
Sbjct: 424 PEVHATALYDYEAQGDGELSFAEGDVLRVLLQDDSGWWEAELNGVIGVVPSNYLQ 478
BLAST of NO04G02810 vs. NCBI_GenBank
Match: XP_013756644.1 (cortactin isoform F [Thecamonas trahens ATCC 50062] >KNC50947.1 cortactin isoform F [Thecamonas trahens ATCC 50062]) HSP 1 Score: 73.2 bits (178), Expect = 2.800e-9 Identity = 39/91 (42.86%), Postives = 46/91 (50.55%), Query Frame = 0
Query: 439 GYETMDSSSGAPKFDETVPLEVAAVAAVDASPTPPV---MARALYDNEPEDETELGFVVGDLLEILTKDDSGWWEARLNGKVGSIPANYVE 527
GY + GA P A A A+P PP A+YD E D+TEL F GD++ +L K D GWW LNG VG PANYVE
Sbjct: 93 GYGGDNGVEGADASTTAEPRTAPAAAPAKAAPGPPATKETCTAVYDYEATDDTELSFNEGDVITVLEKIDDGWWSGELNGNVGVFPANYVE 183
BLAST of NO04G02810 vs. NCBI_GenBank
Match: XP_023698480.1 (GRB2-related adaptor protein 2-like [Paramormyrops kingsleyae]) HSP 1 Score: 72.8 bits (177), Expect = 3.600e-9 Identity = 31/62 (50.00%), Postives = 41/62 (66.13%), Query Frame = 0
Query: 465 AVDASPTPPVMARALYDNEPEDETELGFVVGDLLEILTKDDSGWWEARLNGKVGSIPANYVE 527
A+ + + RALYD + E+E ELGF GDL+E+L + D+ WW+ RL GKVG P NYVE
Sbjct: 173 AIAHTQNQTLQVRALYDFKAEEEDELGFHAGDLIEVLNRSDASWWKGRLRGKVGLFPTNYVE 234
BLAST of NO04G02810 vs. NCBI_GenBank
Match: EZA57696.1 (Myosin-Ie [Ooceraea biroi]) HSP 1 Score: 72.4 bits (176), Expect = 4.700e-9 Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0
Query: 470 PTPPVM--ARALYDNEPEDETELGFVVGDLLEILTKDDSGWWEARLNGKVGSIPANYVE 527
P PP + RALYD EP+D ELG GD+LE+L + + GWW RL GK G P+NYVE
Sbjct: 1107 PAPPSLPKVRALYDYEPQDLDELGLKEGDVLEVLKEHEGGWWHGRLKGKTGLFPSNYVE 1165
BLAST of NO04G02810 vs. NCBI_GenBank
Match: XP_011333188.1 (PREDICTED: unconventional myosin-Ie [Ooceraea biroi]) HSP 1 Score: 72.4 bits (176), Expect = 4.700e-9 Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0
Query: 470 PTPPVM--ARALYDNEPEDETELGFVVGDLLEILTKDDSGWWEARLNGKVGSIPANYVE 527
P PP + RALYD EP+D ELG GD+LE+L + + GWW RL GK G P+NYVE
Sbjct: 1124 PAPPSLPKVRALYDYEPQDLDELGLKEGDVLEVLKEHEGGWWHGRLKGKTGLFPSNYVE 1182
BLAST of NO04G02810 vs. NCBI_GenBank
Match: XP_011629676.1 (PREDICTED: unconventional myosin-Ie-like isoform X1 [Pogonomyrmex barbatus]) HSP 1 Score: 72.4 bits (176), Expect = 4.700e-9 Identity = 34/76 (44.74%), Postives = 45/76 (59.21%), Query Frame = 0
Query: 453 DETVPLEVAAVAAVDASPTPPVM--ARALYDNEPEDETELGFVVGDLLEILTKDDSGWWEARLNGKVGSIPANYVE 527
++ V VA P PP + +ALYD EP+D ELGF GD++E+L + + GWW RL GK G P+NYVE
Sbjct: 1103 EDNVAYAVANKKVPPQKPAPPSLPKVKALYDYEPQDLDELGFKEGDIVEVLKEHEGGWWHGRLKGKTGLFPSNYVE 1178
BLAST of NO04G02810 vs. NCBI_GenBank
Match: XP_011629677.1 (PREDICTED: unconventional myosin-Ie-like isoform X2 [Pogonomyrmex barbatus]) HSP 1 Score: 72.4 bits (176), Expect = 4.700e-9 Identity = 34/76 (44.74%), Postives = 45/76 (59.21%), Query Frame = 0
Query: 453 DETVPLEVAAVAAVDASPTPPVM--ARALYDNEPEDETELGFVVGDLLEILTKDDSGWWEARLNGKVGSIPANYVE 527
++ V VA P PP + +ALYD EP+D ELGF GD++E+L + + GWW RL GK G P+NYVE
Sbjct: 1102 EDNVAYAVANKKVPPQKPAPPSLPKVKALYDYEPQDLDELGFKEGDIVEVLKEHEGGWWHGRLKGKTGLFPSNYVE 1177
BLAST of NO04G02810 vs. NCBI_GenBank
Match: XP_011707661.1 (PREDICTED: unconventional myosin-Ie-like [Wasmannia auropunctata]) HSP 1 Score: 72.0 bits (175), Expect = 6.200e-9 Identity = 33/76 (43.42%), Postives = 45/76 (59.21%), Query Frame = 0
Query: 453 DETVPLEVAAVAAVDASPTPPVM--ARALYDNEPEDETELGFVVGDLLEILTKDDSGWWEARLNGKVGSIPANYVE 527
+++ VA P PP++ +ALYD EP+D ELG GD+LE+L + + GWW RL GK G P+NYVE
Sbjct: 1100 EDSAAYAVANKRVPPQKPAPPILPKVKALYDYEPQDLDELGLKEGDILEVLREHEGGWWHGRLKGKTGLFPSNYVE 1175 The following BLAST results are available for this feature:
BLAST of NO04G02810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G02810 ID=NO04G02810|Name=NO04G02810|organism=Nannochloropsis oceanica|type=gene|length=6738bpback to top protein sequence of NO04G02810.1 >NO04G02810.1-protein ID=NO04G02810.1-protein|Name=NO04G02810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=530bpback to top protein sequence of NO04G02810.2 >NO04G02810.2-protein ID=NO04G02810.2-protein|Name=NO04G02810.2|organism=Nannochloropsis oceanica|type=polypeptide|length=402bpback to top Synonyms
Publications
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