NO04G02780, NO04G02780 (gene) Nannochloropsis oceanica

Overview
NameNO04G02780
Unique NameNO04G02780
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2268
Alignment locationchr4:734574..736841 +

Link to JBrowse

Properties
Property NameValue
DescriptionHect e3 ubiquitin
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:734574..736841 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR035983Hect_E3_ubiquitin_ligase
IPR000569HECT
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Homology
BLAST of NO04G02780 vs. NCBI_GenBank
Match: GAX13768.1 (E3 ubiquitin-protein ligase NEDD4 [Fistulifera solaris])

HSP 1 Score: 483.0 bits (1242), Expect = 1.700e-132
Identity = 279/755 (36.95%), Postives = 395/755 (52.32%), Query Frame = 0
Query:   68 TEPGAFDIPGQQRQAGQIRAQVRIPAGVRPGQHFAVLLEGQQVMVRCPDRASPGDLIAIEFQASTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFS----------LPPTTSGAAGAGVPGVGSTGGS----------------------TAGPPELSPFEKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNHKIRFKLPIVPTNEQLAAYEMKYNKD--GWVRCLGV-DVKFHWFKVD----------------------ASNSNLIGNSAIGXXXXXXXRRPKIGNFSFEDTAFVRSF------RGPRSSPELVLVPPSEVAMDTTV---EGTRLNFHTLSHGAQLPFDKKVEFFRQHCSSLKVPWEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGM-VEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756
            T PGA+ +        Q+  +V +P GVRPG  F V    ++V VRCP  +SPG  + I                                              S          +PP        G     + GG                           PE +P  +++EV VP GV+PG+PF L+A+ QRV VTCP +  P  KIRF+LP+   +  +   E+ Y  +  GW R + V D+KF W +++                           L G +             K   F F  +A+VR             +  + L+P  E  +D+ +     T L++  ++        +K E+F   C  L   WE GH++I VRRS LL DS+ A   + ++++RK +R EFLGEP IDAGGVAREW++ VT+ +F+P FGL+  S  +Q C+ IN +SG+     H  YFRFLGR++G+AL D Q+++ H+V+ + KHILGWP+   D++  D E   +L KL  M+   +  + LDFTVTE  +G    +EL   GA   +   NL+ YLE+NL++R+ +R + QL+ELLLGF++ +PE  LTIFD  +LEL LCG+P +D+ DW A T+Y G +   G  H  VQWFWEVV ++FDQEQRARLLQF TGTSGVP++GF+ LQG DGNI+KFT++ +  +   +PRAHTCFNRIDLP Y SK++L E+L  AI +   GF IE
Sbjct:  126 TRPGAYQVTRTAVGPAQV-YRVTVPVGVRPGAEFTVHAGLRRVRVRCPPTSSPGQSLQITLPPEPVTHHLLLKMAPLTAAEGTPEGGGAVTMTPDVQAVNRQAKLSGGTAQTFLVTIPPNVH----PGQQFTVNVGGXXXXXXXXXXXXXXXXVRIVPPVVREEPEAAPTTQVFEVAVPDGVQPGQPFALMANDQRVLVTCPPNVVPGQKIRFQLPV---SHLVGKIELAYESETSGWRRTVRVNDLKFQWVRLEXXXXXXXXXXXXXXXXXXXXXTTHEDPLAGTTERTVQSKVDVEGMK--QFDFRRSAYVRKVCYLEGNDARMRTGTIELIPAHEAVVDSRLVYHNRTLLSYSDIASVQGKSLQEKTEWFHNICGQLTAAWEDGHIKIAVRRSMLLQDSVDAVMSLGRDDLRKRWRIEFLGEPGIDAGGVAREWFELVTEQIFDPAFGLWIPSANNQACVNINPSSGLSCPEDHLIYFRFLGRVIGRALFDRQLIKGHMVQSIYKHILGWPITFEDIKAQDEEYYHSLQKLTKMED--VSIMYLDFTVTEESMGARREIELTEGGALTEVTNANLELYLESNLRYRMLERTRPQLQELLLGFFDVIPEPPLTIFDANELELTLCGLPTIDMEDWQANTKYSGLYEMAGRSHETVQWFWEVVVEEFDQEQRARLLQFVTGTSGVPSRGFSVLQGIDGNIKKFTIHGVDRKAYFYPRAHTCFNRIDLPNYSSKEELLEKLKAAISLSGIGFDIE 868          
BLAST of NO04G02780 vs. NCBI_GenBank
Match: OEU11760.1 (HECT-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 433.7 bits (1114), Expect = 1.200e-117
Identity = 210/433 (48.50%), Postives = 298/433 (68.82%), Query Frame = 0
Query:  335 LVLVPPSEVAMDTTV-----EGTR-----LNFHTLSHGAQLPFDKKVEFFRQH-CSSLKVPWEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGM-VEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756
            + LVP  E  +++ V      GT+     L++  +++      D+K+++F    C  L  PWEKGH++I VRR  LL DS+ +   + +++MRK +R EF GEP I+AGG+ REW+  VT+ +F+PDFGL+  S  +QM M+IN AS +     H  YFRFLGR++G+AL D Q+++ H+VR + KH+LGWPV   DLE  D E   +L K   M+   L  +CLDFT+TE  LG  + +EL+P G+ K + ++NL  YLEANLK+R+ +R K Q+ EL+LGFY+ +PE  LT+FD  +LEL+LCG+P +D+ DW+  T+Y G +  +G   +VV+WFW+VVR+DFDQE +ARLLQF TGTSGVP +GF+ LQGNDGNI+KF V+ +S +Q V+PRAHTCFNRIDLP Y +KK+L+E++  A+ M   GF IE
Sbjct:    6 VTLVPAQEAVVESRVVDHNYHGTQQTKTLLSYTDIANIQTKTLDEKIDWFNTSVCEELYTPWEKGHVKIIVRRHSLLMDSVDSIMALGRDDMRKRWRIEFAGEPGIEAGGLTREWFQLVTEQIFDPDFGLWLSSDNNQMSMRINGASHISCPDDHLIYFRFLGRVMGRALFDRQLIKGHMVRHLYKHLLGWPVTFEDLEAQDEEYYSSLKKFTTMED--LSVMCLDFTITEETLGVRKDIELIPGGSMKEVTSENLTQYLEANLKYRMLNRCKPQITELMLGFYDIIPEPALTVFDPNELELILCGLPTIDMDDWIDNTKYSGYYESKGRRDQVVEWFWDVVRNDFDQEMKARLLQFVTGTSGVPPRGFSVLQGNDGNIKKFCVHGVSRDQYVYPRAHTCFNRIDLPNYSTKKELREKVGQAVSMTYVGFDIE 436          
BLAST of NO04G02780 vs. NCBI_GenBank
Match: OEU08353.1 (HECT-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 429.5 bits (1103), Expect = 2.200e-116
Identity = 205/393 (52.16%), Postives = 277/393 (70.48%), Query Frame = 0
Query:  367 FDKKVEFFRQHCSSLKVPWEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGMVEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGD----LCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756
            FD+K ++F+  C+ L V W +GHM + +RRS +L DS+ A   +S++++RK++RFEF+GE  IDAGG+AREW++ V   +F+PD GL+  S  +QM M IN AS      H  Y+RFLGR++GKA+ D Q+VR H+V+ + KHILGWP+   DLE +D E   NL +LQ M     GD    LCLDFT+T   +G  + +ELV  GA+  +  DN   Y+EA LK++L   V+ QL ELLLGF++ +PE LLTIFD+Q+LEL++CG+P++D+ DW A TEY GE+   G HH  V+WFWE + ++F  E RARLL F TGTSGVP++GF  LQ NDGNIR FT++ +S E   +PRAHTCFNRIDLPLY SK+ LKERL LA+ M ++GF IE
Sbjct:    4 FDEKTQWFQDTCAQLCVEWNEGHMRMNIRRSHMLGDSVDAVMSLSRKDLRKLWRFEFIGEMGIDAGGLAREWFEIVCSEIFDPDMGLWMSSVTNQMSMTINPASEYCCDDHLVYYRFLGRVMGKAMFDRQLVRGHMVKHLYKHILGWPIYFKDLESVDEEYYNNLKQLQTMHEN--GDDISMLCLDFTMTSEIMGIKKEIELVEGGADIEVTNDNFPEYVEACLKYKLMGSVEPQLNELLLGFFDVIPEPLLTIFDYQELELIMCGLPHIDLEDWKAHTEYSGEYEEIGIHHPTVEWFWETL-EEFTAELRARLLLFVTGTSGVPSRGFGVLQSNDGNIRNFTIHGVSAEICFYPRAHTCFNRIDLPLYDSKEKLKERLKLAVTMSATGFDIE 393          
BLAST of NO04G02780 vs. NCBI_GenBank
Match: GBG25218.1 (E3 ubiquitin-protein ligase NEDD4-like [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 428.3 bits (1100), Expect = 4.900e-116
Identity = 202/418 (48.33%), Postives = 288/418 (68.90%), Query Frame = 0
Query:  338 VPPSEVAMDTTVEGTRLNFHTLSHGAQLPFDKKVEFFRQHCSSLKVPWEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGMVEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756
            +P S   +D  +    +N  TL H +  PF  K+E+FR     +K PWE GH++++VRR +LL D+     ++  E+MR+ FRFEFL EP +DAGGVARE+++ VTD++FN DFGLF+YSGVD +C  IN +SG+    H RYF FLGR++GKAL DG I+  HL RP+ KH+LG+P+  AD+E++D    +++  +++ +   +  L LDFT      G++++VEL P GA+  +  +N + YL   +KF L DR+  QL  LL GFYE VP  L++IFD Q+LELL+CG+PN+DI DW   T Y GE+  +G  H+VVQWFWEV+ ++F QEQRA+ LQF TGTS VP QGF  LQ ++G ++ FT++S++ ++SVFPR+HTCFNRIDLP+Y +K  LK  +  A+ ME+ GF+ E
Sbjct:  366 IPASRFELDPGLPPRPMNASTLVHMSTQPFKDKLEWFRSQMKDMKTPWEDGHVQVKVRRRELLRDAFTNLNKLDPEHMRRHFRFEFLQEPGLDAGGVAREFFELVTDSIFNVDFGLFEYSGVDNICYSINPSSGIANELHMRYFFFLGRIMGKALFDGHIIPAHLTRPMYKHLLGFPITEADIEFVDPVVYKSMIDIKECED--VEYLYLDFTTATRVFGETQSVELKPGGADIEVTNENREQYLHLLVKFILFDRIAPQLSMLLRGFYEVVPAHLISIFDHQELELLMCGLPNIDIDDWRKNTAYRGEYQSKGDRHKVVQWFWEVI-EEFSQEQRAKFLQFATGTSRVPVQGFQALQSSEGVLKLFTIDSVAYDKSVFPRSHTCFNRIDLPVYPNKAALKTYVLKALSMEAVGFAEE 780          
BLAST of NO04G02780 vs. NCBI_GenBank
Match: EJK45378.1 (hypothetical protein THAOC_36008 [Thalassiosira oceanica])

HSP 1 Score: 426.0 bits (1094), Expect = 2.400e-115
Identity = 222/532 (41.73%), Postives = 325/532 (61.09%), Query Frame = 0
Query:  231 RVTVTCPVDARPNHKIRFKLPIVPTNEQLAAYEMKYNKDGWVRCL-GVDVKFHWFKVDASNSNLIGNSAIGXXXXXXXRRPKIGNFSFEDTAFVRSFRGPRSSPELVLVPPSEVAMDTTVEG----TRLNFHTLSHGAQLPFDKKVEFFRQHCSSLKVPWEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGMV-EAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQ-SVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756
            ++TV  P+     +K     P  P  +     ++ Y KDGW R +   D+KF W + D +     G            +   +    F D    +   G  S     LV P +  +D+ ++       +++  +++     F+ K+++F++ CS L   W +GHM + VRR  LLSDS+ A   + ++++RK++RFEF+ E  ID GG+AREW++ VTD +F+PD GL+Q S  +QMCMQIN AS +     H  YFRF+GR++GKA+ DGQ+V+  +V+ + KHILGWPV+ +DL+ +D E   +L  L+DM   +   L  DFT  E  LG   TVELVP G +  +  +NL  Y++ANLK+RL  R + QL ELLLG ++ +P  LLTIFDFQ+LELL+CG+P +DI DW   TEY G + R+G +H V  WFWE+V  ++DQE +ARLLQF TG+SG PA+GF+ LQG +G + KFT++ ++LE    FP  +T  NRIDLP+Y SK +L E+L +AI M ++GF IE
Sbjct:  179 KITVPLPMTIGLEYK-----PGGPKAKLAEISKLSYEKDGWTRTIRPTDMKFQWTRSDEN-----GGVVNSRQRFDDTKSAYVLKLDFHDDDDDKMRHGSVS-----LVTPEKGGVDSNIKSFSGQELVSYQDIANVQNKSFEDKIQWFQETCSQLCAEWNEGHMRMNVRREYLLSDSMEAVMSLGRKDLRKVWRFEFIDEAGIDDGGLAREWFELVTDKVFDPDMGLWQTSASNQMCMQINPASEIACPEDHLIYFRFIGRIMGKAMFDGQLVKGRMVKHLYKHILGWPVMFSDLKDIDEEYYNSLKGLKDMGADI-EYLYADFTTIEETLGVKRTVELVPGGVDIDVTEENLPEYMKANLKYRLLGRYEKQLNELLLGIFDVIPAPLLTIFDFQELELLMCGLPEIDIDDWKENTEYSGGYDREGPNHEVCVWFWEIV-SEYDQELKARLLQFVTGSSGAPARGFSSLQGINGRVMKFTIHGVALENCGAFPSPYTKSNRIDLPIYGSKDELGEKLKIAITMAATGFDIE 693          
BLAST of NO04G02780 vs. NCBI_GenBank
Match: XP_002293434.1 (ubiquitin protein ligase [Thalassiosira pseudonana CCMP1335] >EED89170.1 ubiquitin protein ligase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 416.0 bits (1068), Expect = 2.500e-112
Identity = 194/347 (55.91%), Postives = 262/347 (75.50%), Query Frame = 0
Query:  410 ISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGM-VEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756
            +S++++RK++RFEF+GE  IDAGG+AREW++ VT+ +F+PD GL+Q S  +QMCMQIN AS +     H  YFRF+GR++GKA+ D Q+V+ H+V+ + KHILGWP++  DL+ +D E   +L  L+DM   V   + +DFTV E  LG   TV+LVPDGAN  +  DNL  Y+EA LK+R+  R + QL ELLLGF++ +PE LLTIFDFQ+LELL+CG+P +D+ DW   TEY GE+ R G +H V +WFWE+V  ++D E RARL+QF TGTSGVPA+GF  LQGNDGN+RKFT++ +SLE  V+PR+HTCFNRIDLPLY+ + DL+E+L +AI M S+GF IE
Sbjct:    3 LSRKDLRKVWRFEFIGEAGIDAGGLAREWFELVTEEVFDPDMGLWQTSATNQMCMQINPASEISCPDDHLIYFRFIGRVMGKAMFDRQLVKGHMVKHLYKHILGWPIMFNDLKDIDEEYYNSLKGLKDMGADV-EYVGVDFTVMEETLGVKSTVDLVPDGANIDVTEDNLPEYIEACLKYRMLGRYEAQLNELLLGFFDVIPEPLLTIFDFQELELLMCGLPEIDMQDWQDNTEYSGEYDRDGPNHEVCRWFWEIV-SEYDHEMRARLMQFVTGTSGVPARGFGSLQGNDGNVRKFTIHGVSLETCVYPRSHTCFNRIDLPLYEDRDDLEEKLKIAITMASTGFDIE 347          
BLAST of NO04G02780 vs. NCBI_GenBank
Match: XP_002181887.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46427.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 415.2 bits (1066), Expect = 4.300e-112
Identity = 197/368 (53.53%), Postives = 265/368 (72.01%), Query Frame = 0
Query:  390 MEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGMVEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDM--DPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756
            M + VRR  LL DS+ A   +S+++MRK++RFEF+GE  IDAGG+AREW+  VTD +F+PD G +Q S  +QMCMQIN AS M+      Y+RFLGR++GKAL D Q+V  H+V+ + KH+LGWP+   D+   D E   NL +L ++  +   L  LCLDFT T   +G  + +ELV  GA+  +  DN   YLEA +K+R+  RVK QL ELLLGF++ +PE LLTIFDFQ+LELL+CG+P +D+ DW   TEY G++   G  +   QWFWEVV  +FDQE +ARLLQF TGTSGVP++GF  LQGNDGN+RKFT++ +S+   ++PRAHTCFNRIDLP+Y++K++LKE+L LA+ M +SGF IE
Sbjct:    1 MRMNVRRDHLLEDSVDAVMSLSRKDMRKLWRFEFIGEAGIDAGGLAREWFQLVTDEIFDPDMGFWQSSETNQMCMQINPASQMIHEDFKVYYRFLGRVMGKALFDRQLVAGHMVQFIYKHMLGWPIQFKDIRDSDEELYFNLKQLTELAANGEDLEMLCLDFTTTVEVMGAKQAIELVDGGADIEVTNDNFPEYLEACMKYRMIGRVKEQLNELLLGFFDVIPEPLLTIFDFQELELLMCGLPEIDMQDWQDHTEYSGDYENIGGEYPTCQWFWEVV-GEFDQETKARLLQFVTGTSGVPSRGFGVLQGNDGNVRKFTIHGVSVGTCLYPRAHTCFNRIDLPMYETKEELKEKLKLAVTMCASGFDIE 367          
BLAST of NO04G02780 vs. NCBI_GenBank
Match: XP_002182061.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC46601.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 409.5 bits (1051), Expect = 2.300e-110
Identity = 197/372 (52.96%), Postives = 263/372 (70.70%), Query Frame = 0
Query:  385 WEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGM-VEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756
            WE GH++I VRR  LL DS+ A   + ++++RK +R EFLGEP +D GGV+REW+  VT+ +++PDFGL+  S  +QMCM IN +SGM     H  YFRFLGR+LG+AL D Q+V+ H+VR + KH+LGWP+   D++  D E  Q+L KL  M+   L  +CLDFT TE  LG    V+LV  GA K +  +NL  YLEANL++R+  R+K Q+ ELLLGF++ +PE  LT+FD  +LEL+LCG+P +D+ DW   T Y G F  +G    VV WFWE++++DFDQE RARLLQF TGTSGVP++GFA LQG DGNI+KFT++ +    + +P+AHTCFNRIDLPLY SKK+L +RL  AI M   GF +E
Sbjct:    2 WEDGHVKIVVRRKHLLLDSVDAVMSLGRDDLRKRWRVEFLGEPGMDVGGVSREWFQLVTEQIYDPDFGLWLSSVNNQMCMNINPSSGMSCPEDHFIYFRFLGRILGRALFDRQVVKGHMVRTLYKHLLGWPITFEDIQSQDEEYYQSLKKLTKMEDVSL--MCLDFTATEESLGVRTEVDLVEGGALKEVTNENLAQYLEANLQYRMLGRIKPQVTELLLGFFDIIPEPALTVFDANELELILCGLPEIDMVDWQQNTLYSGMFEGKGCSSEVVTWFWEIMKEDFDQEMRARLLQFVTGTSGVPSRGFAVLQGIDGNIKKFTIHGVD-SCNYYPKAHTCFNRIDLPLYASKKELFDRLKTAITMSGVGFDME 370          
BLAST of NO04G02780 vs. NCBI_GenBank
Match: XP_002176204.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC42810.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 386.7 bits (992), Expect = 1.600e-103
Identity = 184/347 (53.03%), Postives = 247/347 (71.18%), Query Frame = 0
Query:  410 ISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGM-VEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756
            + ++++RK +R EFLGEP +D GGV+REW+  VT+ +++PDFGL+  S  +QMCM IN +SGM     H  YFRFLGR+LG+AL D Q+V+ H+VR + KH+LGWP+   D++  D E  Q+L KL  M+   L  +CLDFT TE  LG    V+LV  GA K +  +NL  YLEANL++R+  R+K Q+ ELLLGF++ +PE  LT+FD  +LEL+LCG+P +D+ DW   T Y G F  +G    VV WFWE++++DFDQE RARLLQF TGTSGVP++GFA LQG DGNI+KFT++ +    + +P+AHTCFNRIDLPLY SKK+L +RL  AI M   GF +E
Sbjct:    3 LGRDDLRKRWRVEFLGEPGMDVGGVSREWFQLVTEQIYDPDFGLWLSSVNNQMCMNINPSSGMSCPEDHFIYFRFLGRILGRALFDRQVVKGHMVRTLYKHLLGWPITFEDIQSQDEEYYQSLKKLTKMEDVSL--MCLDFTATEESLGVRTEVDLVEGGALKEVTNENLAQYLEANLQYRMLGRIKPQVTELLLGFFDIIPEPALTVFDANELELILCGLPEIDMVDWQQNTLYSGMFEGKGCSSEVVTWFWEIMKEDFDQEMRARLLQFVTGTSGVPSRGFAVLQGIDGNIKKFTIHGVD-SCNYYPKAHTCFNRIDLPLYASKKELFDRLKTAITMSGVGFDME 346          
BLAST of NO04G02780 vs. NCBI_GenBank
Match: XP_002293393.1 (ubiquitin protein ligase [Thalassiosira pseudonana CCMP1335] >EED89129.1 ubiquitin protein ligase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 383.6 bits (984), Expect = 1.400e-102
Identity = 187/344 (54.36%), Postives = 246/344 (71.51%), Query Frame = 0
Query:  410 ISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGMV-EAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGF 753
            +S++++RKI+RFEFLGE  IDAGG+AREWY  VT+A+F+ D GL+  +  +QM M+IN +S M     H  YFRFLGR++GKAL DG +V  H+VR + KHILGWP+   DLE  D E   +L  L D+    + D+CLDFT TE+ LG ++ VEL+  GA+  +  +NL  +LE NLK+ L +RVK QL ELLLGF++ +PEALLTIFDFQ+LELL+CGMP +DI DWM  T Y G F + G   +  +WFW++VRD+FDQE RARLLQF TGTSGVP++GF+ LQGNDGNIR+F +N             TCFNRIDLP+Y SK +L+E+L +AI   ++GF
Sbjct:    3 LSRDDLRKIWRFEFLGEVGIDAGGLAREWYQLVTEAIFDADMGLWLSNSTNQMAMRINPSSEMACPEDHLIYFRFLGRVMGKALFDGHLVAGHMVRHLYKHILGWPITFEDLELADEEYYNSLKSLLDIKN--VEDMCLDFTFTEDALGTNKVVELLEKGADTNVTNENLPEFLELNLKYHLMERVKPQLTELLLGFFDVIPEALLTIFDFQELELLMCGMPVIDIDDWMKHTVYQGYFEQHGEKSKTCKWFWQIVRDEFDQETRARLLQFVTGTSGVPSRGFSVLQGNDGNIRQFCINGT-----------TCFNRIDLPVYSSKDELREKLKVAIATSATGF 333          
The following BLAST results are available for this feature:
BLAST of NO04G02780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAX13768.11.700e-13236.95E3 ubiquitin-protein ligase NEDD4 [Fistulifera sol... [more]
OEU11760.11.200e-11748.50HECT-domain-containing protein [Fragilariopsis cyl... [more]
OEU08353.12.200e-11652.16HECT-domain-containing protein [Fragilariopsis cyl... [more]
GBG25218.14.900e-11648.33E3 ubiquitin-protein ligase NEDD4-like [Aurantioch... [more]
EJK45378.12.400e-11541.73hypothetical protein THAOC_36008 [Thalassiosira oc... [more]
XP_002293434.12.500e-11255.91ubiquitin protein ligase [Thalassiosira pseudonana... [more]
XP_002181887.14.300e-11253.53predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_002182061.12.300e-11052.96predicted protein, partial [Phaeodactylum tricornu... [more]
XP_002176204.11.600e-10353.03predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_002293393.11.400e-10254.36ubiquitin protein ligase [Thalassiosira pseudonana... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL081nonsL081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR111ngnoR111Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009539NSK009539Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G02780.1NO04G02780.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578862gene_2050Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100002g6gene1927Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G02780.1NO04G02780.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G02780 ID=NO04G02780|Name=NO04G02780|organism=Nannochloropsis oceanica|type=gene|length=2268bp
ATGGGACAAGAACAAAGCGCTGCCAACCACCAACATCCGCAATCGCTTTA
TCCCGGCGCGGGCGGCTCCCCCGGAGGGCTTCATGGTGGCGGCAGGCGGA
GACCGACCTCAGGCATGTCTCCCTACCAGCAGCCCTCGCCCTCCTCCACA
TTCCATTCCGGTGGTGGCGGCGGCGGGGGTCGCGCATCCCGGCCCGTCAA
CACCGAACCGGGAGCATTCGACATCCCTGGACAACAGCGACAAGCGGGTC
AGATTCGGGCGCAAGTACGGATACCAGCAGGGGTGCGACCAGGGCAGCAT
TTCGCGGTGCTTTTGGAAGGGCAGCAAGTGATGGTCCGCTGTCCTGATCG
TGCTTCGCCGGGTGATCTGATTGCAATTGAATTTCAAGCGTCCACATTCA
TTGTGCAAGTGCCTGAAGGAGTCCATCCAGGACAGACTTTTGATGTGATG
GTGCGTGGGGTCAGGCAACGAGTCACTTGCCCAGAGGGCGTGCGGCCCGG
GATGCAAATCCGCTTTTCCTTGCCTCCCACCACTAGTGGTGCTGCTGGTG
CTGGTGTGCCAGGAGTAGGATCTACAGGAGGGTCTACTGCGGGGCCGCCG
GAGCTGTCGCCATTTGAGAAGTTGTATGAGGTGGTTGTGCCTCAGGGGGT
ACGGCCAGGTGAACCTTTTGTTTTGTTGGCGGACGGGCAACGCGTGACGG
TGACGTGTCCGGTTGATGCGCGACCGAATCATAAAATTCGATTCAAGTTG
CCCATCGTCCCGACGAATGAGCAGTTGGCGGCGTACGAGATGAAGTACAA
CAAGGATGGGTGGGTGCGGTGTCTTGGGGTTGATGTCAAATTTCACTGGT
TTAAGGTCGATGCTTCCAATAGCAACTTGATCGGGAACAGTGCTATCGGT
GGGGGTGGGGCGGGTGGAGGAAGGAGGCCCAAGATTGGTAATTTCTCGTT
TGAAGACACGGCATTCGTAAGGTCATTTAGGGGTCCTCGTTCCTCACCTG
AGTTGGTGCTAGTCCCACCCTCGGAGGTGGCGATGGACACGACAGTGGAG
GGGACGAGACTGAATTTCCATACATTGTCGCATGGGGCTCAATTACCGTT
CGATAAGAAGGTAGAGTTTTTTAGGCAGCATTGCTCGAGCTTGAAGGTGC
CCTGGGAGAAAGGGCATATGGAGATAAGGGTACGGAGGTCGCAATTGCTC
TCGGATTCGTTGATGGCGTTTGAGAGGATCAGCAAGGAGAATATGCGGAA
GATCTTTCGATTTGAGTTTTTGGGCGAGCCAGCGATTGATGCGGGGGGGG
TGGCGAGGGAGTGGTATGACCAGGTCACTGATGCCTTGTTTAACCCTGAT
TTTGGTTTGTTTCAGTACAGTGGGGTAGATCAGATGTGCATGCAGATAAA
CGCAGCGAGTGGTATGGTGGAAGCGCACCATGATCGGTACTTCCGTTTTC
TTGGGCGGTTGCTTGGAAAGGCTTTGTTGGACGGGCAAATTGTGCGGCAT
CATTTGGTGAGACCCGTTATGAAGCACATCCTGGGGTGGCCGGTCGTGTT
GGCGGACCTGGAATACCTCGATGCGGAGACCTTGCAAAATTTGGGTAAAT
TACAAGATATGGACCCGGGCGTTTTGGGGGATCTATGCCTGGACTTTACT
GTGACGGAGAACTTTCTGGGTCAGTCGGAAACGGTGGAGCTGGTCCCAGA
CGGCGCGAACAAGACGTTGGACGCCGATAATCTCGATGCTTATCTGGAAG
CCAACTTGAAGTTTCGGTTGTGTGATCGGGTGAAGGTACAATTGAGGGAG
TTGCTGTTGGGATTTTATGAGTGTGTGCCCGAGGCTTTGTTGACGATTTT
CGATTTTCAGCAGTTGGAGTTGTTGCTGTGCGGGATGCCGAATTTGGACA
TCGCGGATTGGATGGCCCAAACAGAATACGGAGGGGAGTTCTCACGGCAA
GGCGCGCATCATCGCGTGGTTCAATGGTTTTGGGAGGTGGTGAGGGATGA
CTTTGATCAGGAGCAACGGGCGAGGTTATTACAGTTTACGACGGGCACTT
CGGGGGTCCCGGCACAGGGGTTTGCGTTTTTGCAGGGGAATGATGGGAAC
ATACGAAAATTTACGGTAAACAGTATTTCGTTGGAGCAATCCGTTTTCCC
TCGGGCACATACCTGCTTTAATCGGATTGATTTGCCGTTATACAAATCGA
AGAAGGATTTGAAGGAACGCCTGTCGCTGGCCATTCAGATGGAATCGTCG
GGGTTTTCGATTGAGTGA
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protein sequence of NO04G02780.1

>NO04G02780.1-protein ID=NO04G02780.1-protein|Name=NO04G02780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=756bp
MGQEQSAANHQHPQSLYPGAGGSPGGLHGGGRRRPTSGMSPYQQPSPSST
FHSGGGGGGGRASRPVNTEPGAFDIPGQQRQAGQIRAQVRIPAGVRPGQH
FAVLLEGQQVMVRCPDRASPGDLIAIEFQASTFIVQVPEGVHPGQTFDVM
VRGVRQRVTCPEGVRPGMQIRFSLPPTTSGAAGAGVPGVGSTGGSTAGPP
ELSPFEKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNHKIRFKL
PIVPTNEQLAAYEMKYNKDGWVRCLGVDVKFHWFKVDASNSNLIGNSAIG
GGGAGGGRRPKIGNFSFEDTAFVRSFRGPRSSPELVLVPPSEVAMDTTVE
GTRLNFHTLSHGAQLPFDKKVEFFRQHCSSLKVPWEKGHMEIRVRRSQLL
SDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPD
FGLFQYSGVDQMCMQINAASGMVEAHHDRYFRFLGRLLGKALLDGQIVRH
HLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFT
VTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRE
LLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQ
GAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGN
IRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESS
GFSIE*
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Synonyms
Publications