NO04G02780, NO04G02780 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G02780 vs. NCBI_GenBank
Match: GAX13768.1 (E3 ubiquitin-protein ligase NEDD4 [Fistulifera solaris]) HSP 1 Score: 483.0 bits (1242), Expect = 1.700e-132 Identity = 279/755 (36.95%), Postives = 395/755 (52.32%), Query Frame = 0 Query: 68 TEPGAFDIPGQQRQAGQIRAQVRIPAGVRPGQHFAVLLEGQQVMVRCPDRASPGDLIAIEFQASTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFS----------LPPTTSGAAGAGVPGVGSTGGS----------------------TAGPPELSPFEKLYEVVVPQGVRPGEPFVLLADGQRVTVTCPVDARPNHKIRFKLPIVPTNEQLAAYEMKYNKD--GWVRCLGV-DVKFHWFKVD----------------------ASNSNLIGNSAIGXXXXXXXRRPKIGNFSFEDTAFVRSF------RGPRSSPELVLVPPSEVAMDTTV---EGTRLNFHTLSHGAQLPFDKKVEFFRQHCSSLKVPWEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGM-VEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756 T PGA+ + Q+ +V +P GVRPG F V ++V VRCP +SPG + I S +PP G + GG PE +P +++EV VP GV+PG+PF L+A+ QRV VTCP + P KIRF+LP+ + + E+ Y + GW R + V D+KF W +++ L G + K F F +A+VR + + L+P E +D+ + T L++ ++ +K E+F C L WE GH++I VRRS LL DS+ A + ++++RK +R EFLGEP IDAGGVAREW++ VT+ +F+P FGL+ S +Q C+ IN +SG+ H YFRFLGR++G+AL D Q+++ H+V+ + KHILGWP+ D++ D E +L KL M+ + + LDFTVTE +G +EL GA + NL+ YLE+NL++R+ +R + QL+ELLLGF++ +PE LTIFD +LEL LCG+P +D+ DW A T+Y G + G H VQWFWEVV ++FDQEQRARLLQF TGTSGVP++GF+ LQG DGNI+KFT++ + + +PRAHTCFNRIDLP Y SK++L E+L AI + GF IE Sbjct: 126 TRPGAYQVTRTAVGPAQV-YRVTVPVGVRPGAEFTVHAGLRRVRVRCPPTSSPGQSLQITLPPEPVTHHLLLKMAPLTAAEGTPEGGGAVTMTPDVQAVNRQAKLSGGTAQTFLVTIPPNVH----PGQQFTVNVGGXXXXXXXXXXXXXXXXVRIVPPVVREEPEAAPTTQVFEVAVPDGVQPGQPFALMANDQRVLVTCPPNVVPGQKIRFQLPV---SHLVGKIELAYESETSGWRRTVRVNDLKFQWVRLEXXXXXXXXXXXXXXXXXXXXXTTHEDPLAGTTERTVQSKVDVEGMK--QFDFRRSAYVRKVCYLEGNDARMRTGTIELIPAHEAVVDSRLVYHNRTLLSYSDIASVQGKSLQEKTEWFHNICGQLTAAWEDGHIKIAVRRSMLLQDSVDAVMSLGRDDLRKRWRIEFLGEPGIDAGGVAREWFELVTEQIFDPAFGLWIPSANNQACVNINPSSGLSCPEDHLIYFRFLGRVIGRALFDRQLIKGHMVQSIYKHILGWPITFEDIKAQDEEYYHSLQKLTKMED--VSIMYLDFTVTEESMGARREIELTEGGALTEVTNANLELYLESNLRYRMLERTRPQLQELLLGFFDVIPEPPLTIFDANELELTLCGLPTIDMEDWQANTKYSGLYEMAGRSHETVQWFWEVVVEEFDQEQRARLLQFVTGTSGVPSRGFSVLQGIDGNIKKFTIHGVDRKAYFYPRAHTCFNRIDLPNYSSKEELLEKLKAAISLSGIGFDIE 868
BLAST of NO04G02780 vs. NCBI_GenBank
Match: OEU11760.1 (HECT-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 433.7 bits (1114), Expect = 1.200e-117 Identity = 210/433 (48.50%), Postives = 298/433 (68.82%), Query Frame = 0 Query: 335 LVLVPPSEVAMDTTV-----EGTR-----LNFHTLSHGAQLPFDKKVEFFRQH-CSSLKVPWEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGM-VEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756 + LVP E +++ V GT+ L++ +++ D+K+++F C L PWEKGH++I VRR LL DS+ + + +++MRK +R EF GEP I+AGG+ REW+ VT+ +F+PDFGL+ S +QM M+IN AS + H YFRFLGR++G+AL D Q+++ H+VR + KH+LGWPV DLE D E +L K M+ L +CLDFT+TE LG + +EL+P G+ K + ++NL YLEANLK+R+ +R K Q+ EL+LGFY+ +PE LT+FD +LEL+LCG+P +D+ DW+ T+Y G + +G +VV+WFW+VVR+DFDQE +ARLLQF TGTSGVP +GF+ LQGNDGNI+KF V+ +S +Q V+PRAHTCFNRIDLP Y +KK+L+E++ A+ M GF IE Sbjct: 6 VTLVPAQEAVVESRVVDHNYHGTQQTKTLLSYTDIANIQTKTLDEKIDWFNTSVCEELYTPWEKGHVKIIVRRHSLLMDSVDSIMALGRDDMRKRWRIEFAGEPGIEAGGLTREWFQLVTEQIFDPDFGLWLSSDNNQMSMRINGASHISCPDDHLIYFRFLGRVMGRALFDRQLIKGHMVRHLYKHLLGWPVTFEDLEAQDEEYYSSLKKFTTMED--LSVMCLDFTITEETLGVRKDIELIPGGSMKEVTSENLTQYLEANLKYRMLNRCKPQITELMLGFYDIIPEPALTVFDPNELELILCGLPTIDMDDWIDNTKYSGYYESKGRRDQVVEWFWDVVRNDFDQEMKARLLQFVTGTSGVPPRGFSVLQGNDGNIKKFCVHGVSRDQYVYPRAHTCFNRIDLPNYSTKKELREKVGQAVSMTYVGFDIE 436
BLAST of NO04G02780 vs. NCBI_GenBank
Match: OEU08353.1 (HECT-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 429.5 bits (1103), Expect = 2.200e-116 Identity = 205/393 (52.16%), Postives = 277/393 (70.48%), Query Frame = 0 Query: 367 FDKKVEFFRQHCSSLKVPWEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGMVEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGD----LCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756 FD+K ++F+ C+ L V W +GHM + +RRS +L DS+ A +S++++RK++RFEF+GE IDAGG+AREW++ V +F+PD GL+ S +QM M IN AS H Y+RFLGR++GKA+ D Q+VR H+V+ + KHILGWP+ DLE +D E NL +LQ M GD LCLDFT+T +G + +ELV GA+ + DN Y+EA LK++L V+ QL ELLLGF++ +PE LLTIFD+Q+LEL++CG+P++D+ DW A TEY GE+ G HH V+WFWE + ++F E RARLL F TGTSGVP++GF LQ NDGNIR FT++ +S E +PRAHTCFNRIDLPLY SK+ LKERL LA+ M ++GF IE Sbjct: 4 FDEKTQWFQDTCAQLCVEWNEGHMRMNIRRSHMLGDSVDAVMSLSRKDLRKLWRFEFIGEMGIDAGGLAREWFEIVCSEIFDPDMGLWMSSVTNQMSMTINPASEYCCDDHLVYYRFLGRVMGKAMFDRQLVRGHMVKHLYKHILGWPIYFKDLESVDEEYYNNLKQLQTMHEN--GDDISMLCLDFTMTSEIMGIKKEIELVEGGADIEVTNDNFPEYVEACLKYKLMGSVEPQLNELLLGFFDVIPEPLLTIFDYQELELIMCGLPHIDLEDWKAHTEYSGEYEEIGIHHPTVEWFWETL-EEFTAELRARLLLFVTGTSGVPSRGFGVLQSNDGNIRNFTIHGVSAEICFYPRAHTCFNRIDLPLYDSKEKLKERLKLAVTMSATGFDIE 393
BLAST of NO04G02780 vs. NCBI_GenBank
Match: GBG25218.1 (E3 ubiquitin-protein ligase NEDD4-like [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 428.3 bits (1100), Expect = 4.900e-116 Identity = 202/418 (48.33%), Postives = 288/418 (68.90%), Query Frame = 0 Query: 338 VPPSEVAMDTTVEGTRLNFHTLSHGAQLPFDKKVEFFRQHCSSLKVPWEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGMVEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756 +P S +D + +N TL H + PF K+E+FR +K PWE GH++++VRR +LL D+ ++ E+MR+ FRFEFL EP +DAGGVARE+++ VTD++FN DFGLF+YSGVD +C IN +SG+ H RYF FLGR++GKAL DG I+ HL RP+ KH+LG+P+ AD+E++D +++ +++ + + L LDFT G++++VEL P GA+ + +N + YL +KF L DR+ QL LL GFYE VP L++IFD Q+LELL+CG+PN+DI DW T Y GE+ +G H+VVQWFWEV+ ++F QEQRA+ LQF TGTS VP QGF LQ ++G ++ FT++S++ ++SVFPR+HTCFNRIDLP+Y +K LK + A+ ME+ GF+ E Sbjct: 366 IPASRFELDPGLPPRPMNASTLVHMSTQPFKDKLEWFRSQMKDMKTPWEDGHVQVKVRRRELLRDAFTNLNKLDPEHMRRHFRFEFLQEPGLDAGGVAREFFELVTDSIFNVDFGLFEYSGVDNICYSINPSSGIANELHMRYFFFLGRIMGKALFDGHIIPAHLTRPMYKHLLGFPITEADIEFVDPVVYKSMIDIKECED--VEYLYLDFTTATRVFGETQSVELKPGGADIEVTNENREQYLHLLVKFILFDRIAPQLSMLLRGFYEVVPAHLISIFDHQELELLMCGLPNIDIDDWRKNTAYRGEYQSKGDRHKVVQWFWEVI-EEFSQEQRAKFLQFATGTSRVPVQGFQALQSSEGVLKLFTIDSVAYDKSVFPRSHTCFNRIDLPVYPNKAALKTYVLKALSMEAVGFAEE 780
BLAST of NO04G02780 vs. NCBI_GenBank
Match: EJK45378.1 (hypothetical protein THAOC_36008 [Thalassiosira oceanica]) HSP 1 Score: 426.0 bits (1094), Expect = 2.400e-115 Identity = 222/532 (41.73%), Postives = 325/532 (61.09%), Query Frame = 0 Query: 231 RVTVTCPVDARPNHKIRFKLPIVPTNEQLAAYEMKYNKDGWVRCL-GVDVKFHWFKVDASNSNLIGNSAIGXXXXXXXRRPKIGNFSFEDTAFVRSFRGPRSSPELVLVPPSEVAMDTTVEG----TRLNFHTLSHGAQLPFDKKVEFFRQHCSSLKVPWEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGMV-EAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQ-SVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756 ++TV P+ +K P P + ++ Y KDGW R + D+KF W + D + G + + F D + G S LV P + +D+ ++ +++ +++ F+ K+++F++ CS L W +GHM + VRR LLSDS+ A + ++++RK++RFEF+ E ID GG+AREW++ VTD +F+PD GL+Q S +QMCMQIN AS + H YFRF+GR++GKA+ DGQ+V+ +V+ + KHILGWPV+ +DL+ +D E +L L+DM + L DFT E LG TVELVP G + + +NL Y++ANLK+RL R + QL ELLLG ++ +P LLTIFDFQ+LELL+CG+P +DI DW TEY G + R+G +H V WFWE+V ++DQE +ARLLQF TG+SG PA+GF+ LQG +G + KFT++ ++LE FP +T NRIDLP+Y SK +L E+L +AI M ++GF IE Sbjct: 179 KITVPLPMTIGLEYK-----PGGPKAKLAEISKLSYEKDGWTRTIRPTDMKFQWTRSDEN-----GGVVNSRQRFDDTKSAYVLKLDFHDDDDDKMRHGSVS-----LVTPEKGGVDSNIKSFSGQELVSYQDIANVQNKSFEDKIQWFQETCSQLCAEWNEGHMRMNVRREYLLSDSMEAVMSLGRKDLRKVWRFEFIDEAGIDDGGLAREWFELVTDKVFDPDMGLWQTSASNQMCMQINPASEIACPEDHLIYFRFIGRIMGKAMFDGQLVKGRMVKHLYKHILGWPVMFSDLKDIDEEYYNSLKGLKDMGADI-EYLYADFTTIEETLGVKRTVELVPGGVDIDVTEENLPEYMKANLKYRLLGRYEKQLNELLLGIFDVIPAPLLTIFDFQELELLMCGLPEIDIDDWKENTEYSGGYDREGPNHEVCVWFWEIV-SEYDQELKARLLQFVTGSSGAPARGFSSLQGINGRVMKFTIHGVALENCGAFPSPYTKSNRIDLPIYGSKDELGEKLKIAITMAATGFDIE 693
BLAST of NO04G02780 vs. NCBI_GenBank
Match: XP_002293434.1 (ubiquitin protein ligase [Thalassiosira pseudonana CCMP1335] >EED89170.1 ubiquitin protein ligase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 416.0 bits (1068), Expect = 2.500e-112 Identity = 194/347 (55.91%), Postives = 262/347 (75.50%), Query Frame = 0 Query: 410 ISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGM-VEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756 +S++++RK++RFEF+GE IDAGG+AREW++ VT+ +F+PD GL+Q S +QMCMQIN AS + H YFRF+GR++GKA+ D Q+V+ H+V+ + KHILGWP++ DL+ +D E +L L+DM V + +DFTV E LG TV+LVPDGAN + DNL Y+EA LK+R+ R + QL ELLLGF++ +PE LLTIFDFQ+LELL+CG+P +D+ DW TEY GE+ R G +H V +WFWE+V ++D E RARL+QF TGTSGVPA+GF LQGNDGN+RKFT++ +SLE V+PR+HTCFNRIDLPLY+ + DL+E+L +AI M S+GF IE Sbjct: 3 LSRKDLRKVWRFEFIGEAGIDAGGLAREWFELVTEEVFDPDMGLWQTSATNQMCMQINPASEISCPDDHLIYFRFIGRVMGKAMFDRQLVKGHMVKHLYKHILGWPIMFNDLKDIDEEYYNSLKGLKDMGADV-EYVGVDFTVMEETLGVKSTVDLVPDGANIDVTEDNLPEYIEACLKYRMLGRYEAQLNELLLGFFDVIPEPLLTIFDFQELELLMCGLPEIDMQDWQDNTEYSGEYDRDGPNHEVCRWFWEIV-SEYDHEMRARLMQFVTGTSGVPARGFGSLQGNDGNVRKFTIHGVSLETCVYPRSHTCFNRIDLPLYEDRDDLEEKLKIAITMASTGFDIE 347
BLAST of NO04G02780 vs. NCBI_GenBank
Match: XP_002181887.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46427.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 415.2 bits (1066), Expect = 4.300e-112 Identity = 197/368 (53.53%), Postives = 265/368 (72.01%), Query Frame = 0 Query: 390 MEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGMVEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDM--DPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756 M + VRR LL DS+ A +S+++MRK++RFEF+GE IDAGG+AREW+ VTD +F+PD G +Q S +QMCMQIN AS M+ Y+RFLGR++GKAL D Q+V H+V+ + KH+LGWP+ D+ D E NL +L ++ + L LCLDFT T +G + +ELV GA+ + DN YLEA +K+R+ RVK QL ELLLGF++ +PE LLTIFDFQ+LELL+CG+P +D+ DW TEY G++ G + QWFWEVV +FDQE +ARLLQF TGTSGVP++GF LQGNDGN+RKFT++ +S+ ++PRAHTCFNRIDLP+Y++K++LKE+L LA+ M +SGF IE Sbjct: 1 MRMNVRRDHLLEDSVDAVMSLSRKDMRKLWRFEFIGEAGIDAGGLAREWFQLVTDEIFDPDMGFWQSSETNQMCMQINPASQMIHEDFKVYYRFLGRVMGKALFDRQLVAGHMVQFIYKHMLGWPIQFKDIRDSDEELYFNLKQLTELAANGEDLEMLCLDFTTTVEVMGAKQAIELVDGGADIEVTNDNFPEYLEACMKYRMIGRVKEQLNELLLGFFDVIPEPLLTIFDFQELELLMCGLPEIDMQDWQDHTEYSGDYENIGGEYPTCQWFWEVV-GEFDQETKARLLQFVTGTSGVPSRGFGVLQGNDGNVRKFTIHGVSVGTCLYPRAHTCFNRIDLPMYETKEELKEKLKLAVTMCASGFDIE 367
BLAST of NO04G02780 vs. NCBI_GenBank
Match: XP_002182061.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC46601.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 409.5 bits (1051), Expect = 2.300e-110 Identity = 197/372 (52.96%), Postives = 263/372 (70.70%), Query Frame = 0 Query: 385 WEKGHMEIRVRRSQLLSDSLMAFERISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGM-VEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756 WE GH++I VRR LL DS+ A + ++++RK +R EFLGEP +D GGV+REW+ VT+ +++PDFGL+ S +QMCM IN +SGM H YFRFLGR+LG+AL D Q+V+ H+VR + KH+LGWP+ D++ D E Q+L KL M+ L +CLDFT TE LG V+LV GA K + +NL YLEANL++R+ R+K Q+ ELLLGF++ +PE LT+FD +LEL+LCG+P +D+ DW T Y G F +G VV WFWE++++DFDQE RARLLQF TGTSGVP++GFA LQG DGNI+KFT++ + + +P+AHTCFNRIDLPLY SKK+L +RL AI M GF +E Sbjct: 2 WEDGHVKIVVRRKHLLLDSVDAVMSLGRDDLRKRWRVEFLGEPGMDVGGVSREWFQLVTEQIYDPDFGLWLSSVNNQMCMNINPSSGMSCPEDHFIYFRFLGRILGRALFDRQVVKGHMVRTLYKHLLGWPITFEDIQSQDEEYYQSLKKLTKMEDVSL--MCLDFTATEESLGVRTEVDLVEGGALKEVTNENLAQYLEANLQYRMLGRIKPQVTELLLGFFDIIPEPALTVFDANELELILCGLPEIDMVDWQQNTLYSGMFEGKGCSSEVVTWFWEIMKEDFDQEMRARLLQFVTGTSGVPSRGFAVLQGIDGNIKKFTIHGVD-SCNYYPKAHTCFNRIDLPLYASKKELFDRLKTAITMSGVGFDME 370
BLAST of NO04G02780 vs. NCBI_GenBank
Match: XP_002176204.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC42810.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 386.7 bits (992), Expect = 1.600e-103 Identity = 184/347 (53.03%), Postives = 247/347 (71.18%), Query Frame = 0 Query: 410 ISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGM-VEAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGFSIE 756 + ++++RK +R EFLGEP +D GGV+REW+ VT+ +++PDFGL+ S +QMCM IN +SGM H YFRFLGR+LG+AL D Q+V+ H+VR + KH+LGWP+ D++ D E Q+L KL M+ L +CLDFT TE LG V+LV GA K + +NL YLEANL++R+ R+K Q+ ELLLGF++ +PE LT+FD +LEL+LCG+P +D+ DW T Y G F +G VV WFWE++++DFDQE RARLLQF TGTSGVP++GFA LQG DGNI+KFT++ + + +P+AHTCFNRIDLPLY SKK+L +RL AI M GF +E Sbjct: 3 LGRDDLRKRWRVEFLGEPGMDVGGVSREWFQLVTEQIYDPDFGLWLSSVNNQMCMNINPSSGMSCPEDHFIYFRFLGRILGRALFDRQVVKGHMVRTLYKHLLGWPITFEDIQSQDEEYYQSLKKLTKMEDVSL--MCLDFTATEESLGVRTEVDLVEGGALKEVTNENLAQYLEANLQYRMLGRIKPQVTELLLGFFDIIPEPALTVFDANELELILCGLPEIDMVDWQQNTLYSGMFEGKGCSSEVVTWFWEIMKEDFDQEMRARLLQFVTGTSGVPSRGFAVLQGIDGNIKKFTIHGVD-SCNYYPKAHTCFNRIDLPLYASKKELFDRLKTAITMSGVGFDME 346
BLAST of NO04G02780 vs. NCBI_GenBank
Match: XP_002293393.1 (ubiquitin protein ligase [Thalassiosira pseudonana CCMP1335] >EED89129.1 ubiquitin protein ligase [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 383.6 bits (984), Expect = 1.400e-102 Identity = 187/344 (54.36%), Postives = 246/344 (71.51%), Query Frame = 0 Query: 410 ISKENMRKIFRFEFLGEPAIDAGGVAREWYDQVTDALFNPDFGLFQYSGVDQMCMQINAASGMV-EAHHDRYFRFLGRLLGKALLDGQIVRHHLVRPVMKHILGWPVVLADLEYLDAETLQNLGKLQDMDPGVLGDLCLDFTVTENFLGQSETVELVPDGANKTLDADNLDAYLEANLKFRLCDRVKVQLRELLLGFYECVPEALLTIFDFQQLELLLCGMPNLDIADWMAQTEYGGEFSRQGAHHRVVQWFWEVVRDDFDQEQRARLLQFTTGTSGVPAQGFAFLQGNDGNIRKFTVNSISLEQSVFPRAHTCFNRIDLPLYKSKKDLKERLSLAIQMESSGF 753 +S++++RKI+RFEFLGE IDAGG+AREWY VT+A+F+ D GL+ + +QM M+IN +S M H YFRFLGR++GKAL DG +V H+VR + KHILGWP+ DLE D E +L L D+ + D+CLDFT TE+ LG ++ VEL+ GA+ + +NL +LE NLK+ L +RVK QL ELLLGF++ +PEALLTIFDFQ+LELL+CGMP +DI DWM T Y G F + G + +WFW++VRD+FDQE RARLLQF TGTSGVP++GF+ LQGNDGNIR+F +N TCFNRIDLP+Y SK +L+E+L +AI ++GF Sbjct: 3 LSRDDLRKIWRFEFLGEVGIDAGGLAREWYQLVTEAIFDADMGLWLSNSTNQMAMRINPSSEMACPEDHLIYFRFLGRVMGKALFDGHLVAGHMVRHLYKHILGWPITFEDLELADEEYYNSLKSLLDIKN--VEDMCLDFTFTEDALGTNKVVELLEKGADTNVTNENLPEFLELNLKYHLMERVKPQLTELLLGFFDVIPEALLTIFDFQELELLMCGMPVIDIDDWMKHTVYQGYFEQHGEKSKTCKWFWQIVRDEFDQETRARLLQFVTGTSGVPSRGFSVLQGNDGNIRQFCINGT-----------TCFNRIDLPVYSSKDELREKLKVAIATSATGF 333 The following BLAST results are available for this feature:
BLAST of NO04G02780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G02780 ID=NO04G02780|Name=NO04G02780|organism=Nannochloropsis oceanica|type=gene|length=2268bpback to top protein sequence of NO04G02780.1 >NO04G02780.1-protein ID=NO04G02780.1-protein|Name=NO04G02780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=756bpback to top Synonyms
Publications
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