NO04G02630, NO04G02630 (gene) Nannochloropsis oceanica

Overview
NameNO04G02630
Unique NameNO04G02630
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2568
Alignment locationchr4:700581..703148 -

Link to JBrowse

Properties
Property NameValue
DescriptionFg-gap repeat domain protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:700581..703148 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007155cell adhesion
GO:0008150biological_process
Vocabulary: Cellular Component
TermDefinition
GO:0008305integrin complex
GO:0005886plasma membrane
Vocabulary: INTERPRO
TermDefinition
IPR013517FG-GAP
IPR013519Int_alpha_beta-p
IPR000413Integrin_alpha
Homology
BLAST of NO04G02630 vs. NCBI_GenBank
Match: WP_069025031.1 (hypothetical protein [Candidatus Thiodiazotropha endoloripes] >ODB94472.1 hypothetical protein A3196_18270 [Candidatus Thiodiazotropha endoloripes])

HSP 1 Score: 218.0 bits (554), Expect = 8.900e-53
Identity = 140/395 (35.44%), Postives = 215/395 (54.43%), Query Frame = 0
Query:  296 DVNDYFGSSVTNMGSDAKTGLTTLAVGAP---GALENSGMVYFLNLRKDGSVDGYSYLTNADDTLGERWTSNVALGWTVENIGDLDGDGIDDLAVGA-IGHPFGSSQGAIYILFLTEDKRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGVTELAVGAMG---LGKQRGGVYILYLNKDGTVKKTTQISS-LYGWDRKLNVEDQFGHSVHSIGDLDGDGVPELAVGGDG-FPSGEFYGSVWILFLTKEGGVKKWRRLDE----LDAMLEPESLFGGSIASLGDLDGDGFPELIVGAPGANE---FKGDAYIISLNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAIGA---EASPTDKNYGSLHVVFLTP 672
            D  D FG+++ N+G     G+  LAVG+P      EN G V+ L L  DG VD    ++++  +           G  +  + DL+GDG  D+ V A +    G+  GA+++LFL +D  ++ +  I+         L  +  FG ++A +GDL+ DG+T+LAVG       G  RG V+IL++N DGTV    +ISS   G +RK N  D+FG SV ++GDLD DGV ++AVG  G    G   G+VW+LFL  +G V   +R+      L+  L     FG ++A+LGDL+ DG  +LIVGAPG+++    +G  +++ +  D  + +   + D  G    S+ + D+F  SL  +GD+N D   DLA+GA   +   TDK  G+  ++FL P
Sbjct:   49 DDGDRFGAALANIGDLEGDGVIDLAVGSPYDDDNGENRGAVWVLFLDDDGQVDTQQKISDSKGSFDGDLDDGDLFGSALAPLDDLNGDGFRDIVVSAPMDDDGGTDHGALWVLFLKDDGTVESYQKISEESGELNENLDADDQFGHAVANIGDLNNDGITDLAVGMPNDDDGGTDRGAVWILFMNSDGTVSARQKISSEKGGLERKPNDGDRFGSSVTAVGDLDDDGVIDIAVGTSGDDDGGTDRGAVWVLFLNSDGTVDGLKRISHNRGGLEDQLSDGDRFGSALANLGDLNNDGNDDLIVGAPGSDDGGSNRGATWVLFMQGDGEIISASKISDTEGDFDGSLNDNDQFGSSLAGIGDLNEDEHQDLAVGAPFDDNGGTDK--GATWILFLGP 441          
BLAST of NO04G02630 vs. NCBI_GenBank
Match: WP_069006236.1 (hypothetical protein [Candidatus Thiodiazotropha endoloripes] >ODB83147.1 hypothetical protein A3194_16820 [Candidatus Thiodiazotropha endoloripes] >ODB83514.1 hypothetical protein A3193_11440 [Candidatus Thiodiazotropha endoloripes] >ODB90906.1 hypothetical protein A3195_05570 [Candidatus Thiodiazotropha endoloripes])

HSP 1 Score: 215.3 bits (547), Expect = 5.800e-52
Identity = 138/395 (34.94%), Postives = 215/395 (54.43%), Query Frame = 0
Query:  296 DVNDYFGSSVTNMGSDAKTGLTTLAVGAPGALENS---GMVYFLNLRKDGSVDGYSYLTNADDTLGERWTSNVALGWTVENIGDLDGDGIDDLAVGA-IGHPFGSSQGAIYILFLTEDKRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGVTELAVGAMG---LGKQRGGVYILYLNKDGTVKKTTQISS-LYGWDRKLNVEDQFGHSVHSIGDLDGDGVPELAVGGDG-FPSGEFYGSVWILFLTKEGGVKKWRRLDE----LDAMLEPESLFGGSIASLGDLDGDGFPELIVGAPGANE---FKGDAYIISLNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAIGA---EASPTDKNYGSLHVVFLTP 672
            D  D FG+++ N+G     G+  LAVG+P   +N    G V+ L L  DG VD    ++++  +           G  +  + DL+GDG  D+ V A +    G+  GA+++LFL +D  ++ +  I+         L  +  FG ++A +GDL+ DG+T+LAVG       G  RG V+IL++N DGTV    +ISS   G +RK N  D+FG SV ++GDLD DGV ++AVG  G    G   G+VW+LFL  +G V   +R+      L+  L     FG ++A+LGDL+ DG  +L+VGAPG+++    +G  +++ +  D  + +   + D  G    S+ + D+F  SL  +GD+N D   DLA+GA   +   TDK  G+  ++FL P
Sbjct:   49 DDGDRFGAALANIGDLEGDGVIDLAVGSPYDDDNGEDRGAVWVLFLDDDGQVDTQQKISDSKGSFDGDLDDGDLFGSALAPLDDLNGDGFRDIVVSAPMDDDGGTDHGALWVLFLKDDGTVESYQKISEESGELNENLDADDQFGHAVANIGDLNNDGITDLAVGMPNDDDGGTDRGAVWILFMNSDGTVSARQKISSEKGGLERKPNDGDRFGSSVTAVGDLDDDGVIDIAVGTSGDDDGGTDRGAVWVLFLNSDGTVDGLKRISHNRGGLEDQLSDGDRFGSALANLGDLNNDGNDDLMVGAPGSDDGGSNRGATWVLFMQGDGEIISASKISDTEGDFDGSLNDNDQFGSSLAGIGDLNEDEHQDLAVGAPFDDNGGTDK--GATWILFLGP 441          
BLAST of NO04G02630 vs. NCBI_GenBank
Match: WP_098061108.1 (T9SS C-terminal target domain-containing protein [Longimonas halophila] >PEN08714.1 hypothetical protein CRI93_02850 [Longimonas halophila])

HSP 1 Score: 214.2 bits (544), Expect = 1.300e-51
Identity = 151/425 (35.53%), Postives = 215/425 (50.59%), Query Frame = 0
Query:  270 LPSPFKTTGVVSHFHSI---TGVDKYHHFDVNDYFGSSVTNMGSDAKTGLTTLAVGAPG---ALENSGMVYFLNLRKDGSVDGYSYLTNADDTLGERWTSNVAL-GWTVENIGDLDGDGIDDLAVGAIGHPFGSSQ-GAIYILFLTEDKRIKGHTFITTGEAGF-EPVLKENSCFGSSIARLGDLDGDGVTELAVGAM---GLGKQRGGVYILYLNKDGTVKKTTQISSLYGW--DRKLNVEDQFGHSVHSIGDLDGDGVPELAVGGDGFPSG-EFYGSVWILFLTKEGGVKKWRRLDE-----LDAMLEPESLFGGSIASLGDLDGDGFPELIVGAPGANE---FKGDAYIISLNADATVKTFKSVVDEVGVLSDS-IKEEDEFAWSLCNVGDINGDGVPDLAIGAEASPTD-KNYGSLHVVFL 670
            LP   +T G V  F  I    G       +  D FGS    +G     G+  + VGAPG      N+G  Y L L  +G+VD    ++N    L     + V + G     +GD+DGDG+ D+ VGA G   G+S  GA Y+LFL  D  +     I+ G  G    +L+EN  FG    +LGD+DGDGV ++ VGA+         G  Y+L+LN DGTV    +IS+  G      L   D FG+    +GD+DGDGVP++ VG  G   G    G+ ++LFL  +G V   +++          +LE    FG     LGD+DGDG P+++VGA   ++     G AY++ LNAD TV T + + +  G LS S I + DEF      +GD++GDGVPD+ +GA        N G+ +V+ L
Sbjct:   49 LPVRAQTPGEVLSFQEINNGVGGLAGSPLENRDNFGSGAAKIGDVDGDGVPDVLVGAPGDADGASNAGAAYVLFLNANGTVDTQQKISNEAGGLASGTLAEVDIFGIGATGVGDVDGDGVPDVLVGAPGDDDGASNAGAAYVLFLNADGTVDAQQKISNGTGGLPSGLLEENDFFGIGSTKLGDIDGDGVPDVLVGAVEDDDGASNAGAAYVLFLNADGTVDTQQKISNEAGGLAPGTLADGDFFGNGAAGLGDIDGDGVPDVLVGAYGDEDGASNSGAAYVLFLNADGTVDAQQKISNEAGGLPSGLLEENDAFGIDATGLGDIDGDGVPDVLVGATQDDDGGINVGAAYVLFLNADGTVNTQQKISNGNGGLSGSTIADGDEFGRGAAGLGDVDGDGVPDVLVGARRDDDGLLNSGTAYVLSL 473          
BLAST of NO04G02630 vs. NCBI_GenBank
Match: AIF14078.1 (FG-GAP repeat domain protein [uncultured marine thaumarchaeote KM3_65_H02])

HSP 1 Score: 211.8 bits (538), Expect = 6.400e-51
Identity = 142/398 (35.68%), Postives = 212/398 (53.27%), Query Frame = 0
Query:  300 YFGSSVTNMGSDAKTGLTTLAVGA---PGALENSGMVYFLNLRKDGSVDGYSYLTNADDTL--GERWTSNVALGWTVENIGDLDGDGIDDLAVGAIGHP-----------FGSSQGAIYILFLTEDKRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGVTELAVGAMGLGKQRGGVYILYLNKDGTVKKTTQISSLYGWDRKLNVEDQFGHSVHSIGDLDGDGVPELAVGG---DGFPSGEFYGSVWILFLTKEGGVKKWRRLDELDAM-----LEPESLFGGSIASLGDLDGDGFPELIVGA---PGANEFKGDAYIISLNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAIGAEA-SPTDKNYGSLHVVFL 670
            +FG SV N+G     G+  LAVGA   P      G V  + +  DGSV         DDT   G   ++N   G+ + NIGDLDG+G++DLAVGA                 S+ GA++I+FL  D  +   + +        PVL     FG S+  +GDLDGDGV +LAVGA+     +G VYI+++N DG+V  T +I+        L   DQFG  + +IGDLDG+GV +LAVG    DG  +G   G++ I+FL  +G + K +  +  D+      LE    FG ++  +GDLDG+G  +L VGA    G    +G  +II LN+D T+    + +++      ++ + D F  S+ ++GD++G+GV DLA+GA        N G+LH++F+
Sbjct:   60 WFGRSVENIGDLDGDGVNDLAVGATLDPAGGTKRGTVNIMFMNTDGSVKS---TVEIDDTTTNGPTLSNNDRFGYAIANIGDLDGNGVNDLAVGAAHDDTASDGNDGSLGVNSNIGAVHIIFLNSDGTLTKQSVVINDSTANGPVLGLTHYFGRSVENIGDLDGDGVNDLAVGAI---DGKGAVYIMFMNTDGSVDSTVEINDSTTNGPDLASGDQFGLGIANIGDLDGNGVNDLAVGAIYDDG--TGTDRGALHIIFLDSDGTLTK-QSAEINDSTTNGPDLEDSDFFGSAVEKIGDLDGNGVNDLAVGAFDDNGEGTDRGALHIIFLNSDGTLTKQSAEINDSTTNGPTLSDVDRFGSSVADIGDLDGNGVNDLAVGAYLDDEIGSNRGALHIIFM 448          
BLAST of NO04G02630 vs. NCBI_GenBank
Match: WP_108275525.1 (hypothetical protein [gamma proteobacterium symbiont of Ctena orbiculata] >PUB72255.1 hypothetical protein DBP03_17860 [gamma proteobacterium symbiont of Ctena orbiculata])

HSP 1 Score: 210.3 bits (534), Expect = 1.900e-50
Identity = 136/391 (34.78%), Postives = 209/391 (53.45%), Query Frame = 0
Query:  296 DVNDYFGSSVTNMGSDAKTGLTTLAVGAP---GALENSGMVYFLNLRKDGSVDGYSYLTNADDTLGERWTSNVALGWTVENIGDLDGDGIDDLAVGA-IGHPFGSSQGAIYILFLTEDKRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGVTELAVGAMG---LGKQRGGVYILYLNKDGTVKKTTQISS-LYGWDRKLNVEDQFGHSVHSIGDLDGDGVPELAVGGDG-FPSGEFYGSVWILFLTKEGGVKKWRRLDE----LDAMLEPESLFGGSIASLGDLDGDGFPELIVGAPGANE---FKGDAYIISLNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAIGAEASPT-DKNYGSLHVVFL 670
            D  D FGS++  +G     G+T LAVGAP    + EN G V+ L +  DG VD    ++                G  +  +GDL+ DG  D+AVGA +    GS +GA++ILFL  +  ++    I+     F   L +N  FG ++A +GDL+GDGV +LAV A      G  RG V+IL+++ DGTV    +ISS   G DR    ED FG ++  IGDLD DGV +LAVG  G    G   G +WILFL  +G V   RR+ +     +  L     FG ++++LGD++ DG  +L VGA  +++    +G  +I+ +  +  V +   + D  G     +   D F  +L ++GD++GDG+ D+A+GA      D++ G++ ++F+
Sbjct:   54 DAGDQFGSAIARIGDLEGDGVTDLAVGAPFDDDSGENRGAVWVLFMDSDGEVDSEQKISADAGGFDGALDDEDRFGSAIAPLGDLNNDGFLDIAVGAPLDDDGGSDKGAVWILFLNGEGGVESEQKISDDAGDFPGDLDDNDRFGHALAAIGDLNGDGVEDLAVAAPNDDDGGTDRGAVWILFMDSDGTVDSVQKISSDRGGLDRDPGDEDHFGSALTEIGDLDDDGVVDLAVGVSGDDDGGSDRGGLWILFLNDDGSVDSMRRITQTRGGFEGSLGDNDQFGNAVSNLGDINDDGITDLAVGAKLSDDGGADRGAVWILFMEINGEVISSTRLSDTKGNFRGDLDSGDHFGSALAHLGDLDGDGIGDIAVGACLDDDGDRDSGAVWILFM 444          
BLAST of NO04G02630 vs. NCBI_GenBank
Match: PUB76542.1 (hypothetical protein DBO99_13890 [gamma proteobacterium symbiont of Ctena orbiculata])

HSP 1 Score: 210.3 bits (534), Expect = 1.900e-50
Identity = 136/391 (34.78%), Postives = 209/391 (53.45%), Query Frame = 0
Query:  296 DVNDYFGSSVTNMGSDAKTGLTTLAVGAP---GALENSGMVYFLNLRKDGSVDGYSYLTNADDTLGERWTSNVALGWTVENIGDLDGDGIDDLAVGA-IGHPFGSSQGAIYILFLTEDKRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGVTELAVGAMG---LGKQRGGVYILYLNKDGTVKKTTQISS-LYGWDRKLNVEDQFGHSVHSIGDLDGDGVPELAVGGDG-FPSGEFYGSVWILFLTKEGGVKKWRRLDE----LDAMLEPESLFGGSIASLGDLDGDGFPELIVGAPGANE---FKGDAYIISLNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAIGAEASPT-DKNYGSLHVVFL 670
            D  D FGS++  +G     G+T LAVGAP    + EN G V+ L +  DG VD    ++                G  +  +GDL+ DG  D+AVGA +    GS +GA++ILFL  +  ++    I+     F   L +N  FG ++A +GDL+GDGV +LAV A      G  RG V+IL+++ DGTV    +ISS   G DR    ED FG ++  IGDLD DGV +LAVG  G    G   G +WILFL  +G V   RR+ +     +  L     FG ++++LGD++ DG  +L VGA  +++    +G  +I+ +  +  V +   + D  G     +   D F  +L ++GD++GDG+ D+A+GA      D++ G++ ++F+
Sbjct:   56 DAGDQFGSAIARIGDLEGDGVTDLAVGAPFDDDSGENRGAVWVLFMDSDGEVDSEQKISADAGGFDGALDDEDRFGSAIAPLGDLNNDGFLDIAVGAPLDDDGGSDKGAVWILFLNGEGGVESEQKISDDAGDFPGDLDDNDRFGHALAAIGDLNGDGVEDLAVAAPNDDDGGTDRGAVWILFMDSDGTVDSVQKISSDRGGLDRDPGDEDHFGSALTEIGDLDDDGVVDLAVGVSGDDDGGSDRGGLWILFLNDDGSVDSMRRITQTRGGFEGSLGDNDQFGNAVSNLGDINDDGITDLAVGAKLSDDGGADRGAVWILFMEINGEVISSTRLSDTKGNFRGDLDSGDHFGSALAHLGDLDGDGIGDIAVGACLDDDGDRDSGAVWILFM 446          
BLAST of NO04G02630 vs. NCBI_GenBank
Match: AIF05694.1 (FG-GAP repeat domain protein [uncultured marine thaumarchaeote KM3_186_G04] >AIF14350.1 FG-GAP repeat domain protein [uncultured marine thaumarchaeote KM3_67_A06])

HSP 1 Score: 209.1 bits (531), Expect = 4.100e-50
Identity = 141/399 (35.34%), Postives = 214/399 (53.63%), Query Frame = 0
Query:  300 YFGSSVTNMGSDAKTGLTTLAVGA---PGALENSGMVYFLNLRKDGSVDGYSYLTNADDTL--GERWTSNVALGWTVENIGDLDGDGIDDLAVGAIGHP-----------FGSSQGAIYILFLTEDKRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGVTELAVGAMGLGKQRGGVYILYLNKDGTVKKTTQISSLYGWDRKLNVEDQFGHSVHSIGDLDGDGVPELAVGG---DGFPSGEFYGSVWILFLTKEGGVKKWRRLDELDAM-----LEPESLFGGSIASLGDLDGDGFPELIVGAPGAN----EFKGDAYIISLNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAIGAEA-SPTDKNYGSLHVVFL 670
            +FG SV N+G     G+  LAVGA   P      G V  + +  DGSV         DDT   G   ++N   G+ + NIGDLDG+G++DLAVGA                 S+ GA++I+FL  D  +   + +        PVL     FG S+  +GDLDGDGV +LAVGA+     +G VYI+++N +G+V  T +I+        L   DQFG SV +IGDLDG+G+ +LAVG    DG  +G   G++ I+FL  +G + K +  +  D+      LE    FG ++  +GDLDG+G  +L VGA   N    +  G  +II L++D T+    + +++      ++ ++D F  S+ ++GD++G+GV DLA+GA        N G+LH++F+
Sbjct:   60 WFGRSVENIGDLDGDGVNDLAVGAILDPAGGTKRGTVNIMFMNTDGSVKS---TVEIDDTTTNGPTLSNNDRFGYAIANIGDLDGNGVNDLAVGAAHDDTASDGNDGALGANSNIGAVHIIFLNSDGTLTKQSVVINDSTANGPVLGLTHYFGRSVENIGDLDGDGVNDLAVGAI---DGKGAVYIMFMNTNGSVDSTVEINDSTTSGPDLASGDQFGMSVANIGDLDGNGINDLAVGAIYDDG--TGTDRGALHIIFLDSDGTLTK-QSAEINDSTTNGPDLEDSDFFGSAVEKIGDLDGNGVNDLAVGAFDDNGEGTDPVGALHIIFLDSDGTLTKQSAEINDSTTNGPTLSDDDRFGSSVADIGDLDGNGVNDLAVGAYLDDEVGSNRGALHIIFM 449          
BLAST of NO04G02630 vs. NCBI_GenBank
Match: PCH99135.1 (hypothetical protein COB85_00675, partial [Bacteroidetes bacterium])

HSP 1 Score: 207.6 bits (527), Expect = 1.200e-49
Identity = 141/426 (33.10%), Postives = 216/426 (50.70%), Query Frame = 0
Query:  276 TTGVVSHFHSITGVDKYHHFDVN--DYFGSSVTNMGSDAKTGLTTLAVGA---PGALENSGMVYFLNLRKDGSVDGYSYLTNADDTLGERWTSNVALGWTVENIGDLDGDGIDDLAVGAIG-HPFGSSQGAIYILFLTED--------KRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGVTELAVGAM---GLGKQRGGVYILYLNKDGTVKKTTQISSLYG-WDRKLNVEDQFGHSVHSIGDLDGDGVPELAVG----GDGFPSGEFYGSVWILFLTKEGGVKKWRRLD----ELDAMLEPESLFGGSIASLGDLDGDGFPELIVGA---PGANEFKGDAYIISLNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAIGAEASP---TDKNYGSLHVVFL 670
            T G V     I+     +   +N  D FG+ ++ +      G+  + + +        N G +  L L   G+V  +  ++N           + A  + + ++GDLDGDG  D+AVGA G    G+ +GA++ILFL +          ++K H  I+     F   L ++  FG+ IA +GDLDGDGV +LAVGA      G   G V+IL++N DGTVK   +IS   G +         FG  +  +GDLDGD VP++AVG     DG   G   G++WILFL  +G VK ++++          L     FG  I+ LGDLDGD   +++VGA         KG  +++ LNA+ TVK+ + + +  G  S  +   D F   + ++GDINGD +PDLA+GA +     TD+  G++ V+F+
Sbjct: 1093 TNGTVKTHQKISSTQGGYTGGLNNGDNFGAGISAINDLDGNGVDDILISSLYDDDGGPNRGAIRLLYLDNSGNVIAHMKISNTQGNFNGVLDDSDAFSYNLTSLGDLDGDGFTDIAVGAFGDDDGGTDRGAVWILFLEDTCAAPPPPCPQVKSHQKISDISGNFTGTLVDSDIFGADIANIGDLDGDGVDDLAVGAQYDGDGGTWHGAVWILFMNTDGTVKSQQKISDTQGNFTGTFTSTCTFGSGIAPLGDLDGDSVPDIAVGARRDNDG---GTRRGAIWILFLNTDGTVKSYQKISSTQGNFSGGLANGDEFGRCISLLGDLDGDSIIDIVVGANYDDDGGTDKGAVWVLFLNANGTVKSQQKISNTQGGFSGLLDNSDSFGMGVASLGDINGDNIPDLAVGARSDDDGGTDR--GAVWVLFM 1513          
BLAST of NO04G02630 vs. NCBI_GenBank
Match: WP_040251807.1 (T9SS C-terminal target domain-containing protein [Psychroserpens mesophilus])

HSP 1 Score: 207.2 bits (526), Expect = 1.600e-49
Identity = 128/320 (40.00%), Postives = 190/320 (59.38%), Query Frame = 0
Query:  368 GWTVENIGDLDGDGIDDLAVGAIGHPFGS-SQGAIYILFLTEDKRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGVTELAVGAM---GLGKQRGGVYILYLNKDGTVKKTTQISSLYG-WDRKLNVEDQFGHSVHSIGDLDGDGVPELAVG----GDGFPSGEFYGSVWILFLTKEGGVKKWRRLDE----LDAMLEPESLFGGSIASLGDLDGDGFPELIVGAPGANE---FKGDAYIISLNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAIGAE--ASPTDKNYGSLHVVFL 670
            G+TVE IGDL+ DG+ DLAV ++    G+ + G++YILFL     +  +T I     GF  VL+E   FG+SI+ LGDLDGDG TE+AVGA      G + G ++IL LN DGTV    +ISS+ G +   L+V D FG  + S+GDL+GDG  ++AV     GDG   G   G+VWILFL  +  V  ++++          L+ E  FGGS+ ++GDL+ DG  +L VGA   ++    KG  YI+ LN+D TV + + + + VG  +D++ +   F  S+ NV DIN DG  ++ +G+    + T++N GS +++ L
Sbjct:   50 GYTVEGIGDLNNDGVPDLAVSSLKDNQGALNAGSVYILFLDSTGSVGNYTKIGNNSGGFSGVLEEWDIFGASISYLGDLDGDGKTEIAVGAEYDGDGGYRHGAIWILSLNNDGTVYSHQKISSVEGSFGGSLDVWDVFGTDIESLGDLNGDGHTDIAVAARRDGDG---GLEKGAVWILFLNADFTVNNYQKISSTSGGFTGTLDIEDSFGGSVCNIGDLNNDGVIDLAVGAYRDDDGGFNKGAVYILFLNSDGTVSSHQKISETVGGFTDTLSQFSHFGKSIANVMDINEDGKKEILVGSSGYVNGTNENAGSFYIINL 366          
BLAST of NO04G02630 vs. NCBI_GenBank
Match: PHS73989.1 (hypothetical protein COB59_12440, partial [Rhodospirillaceae bacterium])

HSP 1 Score: 207.2 bits (526), Expect = 1.600e-49
Identity = 143/423 (33.81%), Postives = 223/423 (52.72%), Query Frame = 0
Query:  268 LVLPSPFKTTGVVSHFHSITGVDKYHHFDVNDYFGSSVTNMGSDAKTGLTTLAVGAPGALE---NSGMVYFLNLRKDGSVDGYSYLTNADDTLGERWTSNV---ALGWTVENIGDLDGDGIDDLAVGAI-GHPFGSSQGAIYILFLTEDKRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGVTELAVGAM----GLGKQRGGVYILYLNKDGTVKKTTQIS-SLYGWDRKLNVEDQFGHSVHSIGDLDGDGVPELAVGG-DGFPSGEFYGSVWILFLTKEGGVKKWRRLDELD----AMLEPESLFGGSIASLGDLDGDGFPELIVGAPGANE---FKGDAYIISLNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAIGAEA-SPTDKNYGSLHVVFL 670
            +V+ S  K  G+V  F          + D+ND  GSSV N+G     G+T +AVGA G  +    +G V+ L +  DG+V  +  +++   T G  +T N+     G +V  +GDL+GD ++D+AVGAI     GS+ G ++ILFL  +  +     I+    GF    +    FG S+    DL+ DG  EL V A+     +G  +G V++L+LN +GTV    +I+    G+   L  +  FG+ V  IGD++GD +P++AVG  D    G  +G++WILF+   G V   +++   D      L+    FG S  S+GD+DGDG  ++ VG P  ++    +G  +I+ LN+D TVK  + + D  G  +  +   D FA  L N+GD+NGDGV DL +G      +  + G+  V+FL
Sbjct:    3 VVVESSQKINGLVGGF--------IGNLDLNDLLGSSVANIGDLNNDGVTDMAVGARGDDDGGFQNGAVWILFMNSDGTVSSHQKISS---TAG-GFTGNIDGDLFGMSVAALGDLNGDNVEDIAVGAIFSDDGGSAHGEVWILFLNTNGTVSSSQKISDISGGFTGTFESYDNFGWSLGS-ADLNSDGRKELLVXAIQDTDTVGTAKGKVWVLFLNTNGTVSSHQEITEGSGGFAGTLAGDGFFGYGVAGIGDVNGDNIPDIAVGARDDDLGGTNHGAIWILFMNTNGTVGSQQKISSADGNFTGALDVNXNFGRSXTSIGDIDGDGVLDIAVGEPYGSDGGSLRGGIWILCLNSDGTVKAHRKISDLQGNFTGGLSNNDRFATGLTNMGDLNGDGVIDLGVGEPGDDDSASSSGAAWVLFL 412          
The following BLAST results are available for this feature:
BLAST of NO04G02630 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
WP_069025031.18.900e-5335.44hypothetical protein [Candidatus Thiodiazotropha e... [more]
WP_069006236.15.800e-5234.94hypothetical protein [Candidatus Thiodiazotropha e... [more]
WP_098061108.11.300e-5135.53T9SS C-terminal target domain-containing protein [... [more]
AIF14078.16.400e-5135.68FG-GAP repeat domain protein [uncultured marine th... [more]
WP_108275525.11.900e-5034.78hypothetical protein [gamma proteobacterium symbio... [more]
PUB76542.11.900e-5034.78hypothetical protein DBO99_13890 [gamma proteobact... [more]
AIF05694.14.100e-5035.34FG-GAP repeat domain protein [uncultured marine th... [more]
PCH99135.11.200e-4933.10hypothetical protein COB85_00675, partial [Bactero... [more]
WP_040251807.11.600e-4940.00T9SS C-terminal target domain-containing protein [... [more]
PHS73989.11.600e-4933.81hypothetical protein COB59_12440, partial [Rhodosp... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL081nonsL081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR058ncniR058Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR111ngnoR111Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009555NSK009555Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G02630.1NO04G02630.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578807gene_2033Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100177g14gene1944Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G02630.1NO04G02630.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G02630 ID=NO04G02630|Name=NO04G02630|organism=Nannochloropsis oceanica|type=gene|length=2568bp
CTCCAGCTAGCGAGGGTAGGGAAGCGGAAAGCGGGCTTGCCCTTGGTCGA
GAAGCCAAATTTGCGAGACCCCCCCGCACGGCACGCAAACGCACGCACGC
AATTATGGACCTACCGGAATACAACAGCAGCCCCCGAAACTCCATACTGA
GTCCGGGGCTGACCCACCGTGCCAGCAAGACCCCTAGAAGCTCTGGTCTG
GGCGAGGAGACGACGTCGCACTTCCAATTCAATGAGATTGCCTTTGGTgt
gagtaggataacatcccatgcctgttacatgcccagctttgtctagcacc
ttcatgtgtcagcgcgtatcagcactccttccatccctcttgttgcgtcc
tttctctatcaacagggctggagacatacctcgtaccccggctctgcacc
ctatgcatacactcctcctcgctttaacgtcacacagtcaaacctctgct
tccattgtcgtcacaccaattcttgcattttaactcacacacttgcacag
CACCAACCCTCAATCCCTGAGGAAGAGTCCGGCGGGCAATACAACAACAA
CAAAGAAAACAAGATCAAGACCCCTTTCCAACATCTCCGTCAAAGCCCCC
GCCTCGTCGCCATCTCCCCCTTGAAGCGACTTTTACTGGGGGCCAGCGTC
TCAGCCGTTCTTCTCGGCATCTTATTTGTAGCTGGGTTTTTTGACAATCG
CTCCCAGTCTTCCGGTGGCACCCCTCGTCGTTCCGAAGGAGGTATGCGTC
CTGCCTCCGCCTCTTTGCGAGGCACTGTCGGAGACATTGGCCCTGCTGCC
GGTCCTGCCGCAGCGGCATCCCTGGCTTCAACACTCACTAGTGGGATGCT
CTTTCCTCGTAATAATGACGTAGACCACCATAAGCCGCGTGTGCTGATGA
TTCATTCGTTGAAGCCATTTGAACGTCGGAACGCCCACCATTTCAGGCAT
CACGACCCGGACAACAAGCTCACGGGGGGGCTGGCCTTTTCACCCCCTGC
CGTAGGGAGCCGACAGAAGAAAGTGCAGGAGTCCCAGGAGGAGGATACTG
CTGAGTACGTCGACGAGGTGGATCACAACGAAGATTTGGAGCGACGGGCT
GTATCGCCCCCGGCGGAGGATGTGTTGAAGATTGACCAGGCTTTGAACAA
GCTTGCGTTGGTGTTGCCTTCGCCATTCAAGACGACGGGGGTCGTTTCTC
ATTTTCATTCTATCACAGGCGTGGACAAGTACCACCATTTTGACGTGAAT
GATTATTTTGGGTCGTCTGTAACTAATATGGGGAGCGATGCCAAGACTGG
CTTGACCACGCTCGCGGTGGGTGCACCCGGGGCTCTGGAAAATTCGGGAA
TGGTCTACTTCTTGAATCTGCGAAAGGATGGAAGCGTAGATGGTTATAGT
TATTTGACGAATGCGGATGATACCTTGGGGGAGCGTTGGACGTCAAATGT
GGCTTTGGGATGGACGGTGGAAAATATCGGGGATTTGGATGGGGACGGTA
TTGACGACCTGGCCGTTGGTGCGATTGGTCACCCCTTCGGGAGCTCACAA
GGCGCGATCTACATATTGTTTTTGACGGAAGATAAGCGAATTAAGGGGCA
TACATTCATCACAACGGGGGAGGCAGGGTTCGAGCCTGTCCTAAAGGAAA
ACTCGTGCTTTGGCTCGTCGATCGCCCGTCTCGGAGATTTAGACGGAGAT
GGCGTTACTGAGCTTGCGGTGGGCGCGATGGGCTTGGGCAAGCAGCGAGG
GGGGGTGTACATTCTCTATTTAAATAAAGATGGGACGGTGAAAAAGACAA
CGCAGATTTCGTCATTGTATGGGTGGGACCGTAAACTGAATGTGGAAGAT
CAGTTTGGACATTCAGTGCATTCGATTGGCGATTTAGATGGGGATGGGGT
CCCTGAATTGGCGGTGGGTGGTGACGGTTTCCCCTCGGGAGAATTCTATG
GCTCGGTGTGGATCTTGTTCTTGACCAAGGAGGGGGGGGTGAAGAAGTGG
AGGAGGTTGGATGAGCTGGATGCGATGTTAGAGCCTGAGAGCTTGTTTGG
GGGGTCGATTGCTTCGCTTGGGGATCTAGACGGAGATGGATTTCCGGAGT
TGATTGTTGGGGCACCTGGCGCGAATGAATTTAAGGGGGACGCGTACATT
ATTTCGTTGAATGCAGATGCAACGGTGAAGACTTTTAAGAGCGTGGTGGA
TGAGGTTGGGGTGTTGTCGGATAGTATAAAGGAGGAGGATGAGTTTGCCT
GGTCGTTGTGTAACGTTGGGGATATTAATGGGGATGGCGTGCCAGATTTG
GCAATCGGCGCTGAAGCCTCACCAACGGATAAAAACTATGGCTCATTGCA
CGTTGTATTTTTGACGCCAAGGTAGAAAGGGGGTGCATAGTAGATGGGAG
GGAAGGGAGAGAGAAAATGACACAAGGAAGTCTCGAGGTGCGGAGAGAAG
GAAAAAAAAGAAGAGAATCTTTTGATAGCGTCTAGGGTCTCTTTTATATT
CAATTTATATGTACCCTGGCAAAAGTAGTACCAGACAAAAAGCAAAAAGT
TGCCGAAATGTTGAGAAT
back to top

protein sequence of NO04G02630.1

>NO04G02630.1-protein ID=NO04G02630.1-protein|Name=NO04G02630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=673bp
MDLPEYNSSPRNSILSPGLTHRASKTPRSSGLGEETTSHFQFNEIAFGHQ
PSIPEEESGGQYNNNKENKIKTPFQHLRQSPRLVAISPLKRLLLGASVSA
VLLGILFVAGFFDNRSQSSGGTPRRSEGGMRPASASLRGTVGDIGPAAGP
AAAASLASTLTSGMLFPRNNDVDHHKPRVLMIHSLKPFERRNAHHFRHHD
PDNKLTGGLAFSPPAVGSRQKKVQESQEEDTAEYVDEVDHNEDLERRAVS
PPAEDVLKIDQALNKLALVLPSPFKTTGVVSHFHSITGVDKYHHFDVNDY
FGSSVTNMGSDAKTGLTTLAVGAPGALENSGMVYFLNLRKDGSVDGYSYL
TNADDTLGERWTSNVALGWTVENIGDLDGDGIDDLAVGAIGHPFGSSQGA
IYILFLTEDKRIKGHTFITTGEAGFEPVLKENSCFGSSIARLGDLDGDGV
TELAVGAMGLGKQRGGVYILYLNKDGTVKKTTQISSLYGWDRKLNVEDQF
GHSVHSIGDLDGDGVPELAVGGDGFPSGEFYGSVWILFLTKEGGVKKWRR
LDELDAMLEPESLFGGSIASLGDLDGDGFPELIVGAPGANEFKGDAYIIS
LNADATVKTFKSVVDEVGVLSDSIKEEDEFAWSLCNVGDINGDGVPDLAI
GAEASPTDKNYGSLHVVFLTPR*
back to top
Synonyms
Publications