NO04G02180, NO04G02180 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G02180 vs. NCBI_GenBank
Match: PKO19013.1 (glycoside hydrolase [Chloroflexi bacterium HGW-Chloroflexi-10]) HSP 1 Score: 266.5 bits (680), Expect = 2.200e-67 Identity = 149/395 (37.72%), Postives = 222/395 (56.20%), Query Frame = 0 Query: 293 GAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAMGNSKKGFFTKDGKATFNPTDWGLRH-------------SNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGWQQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673 GA TG+YRNLF E + K+ E +KLE W+ F GD + +Y +M +++ + V SEG+SYGM+ V L K E F+RLW W + +M + G Y+ +FAW T G ++A PA D E + AL+ A +WG+ + Y+AEA +++ M + ++ TK AT N +W + ++PSYHLP +Y+ +AR+ + + D FW ++A SR +F AA P TGL+PDY +G + + H +F++DAWR +NVA+D AW+ D WQ + ++R L F AS+G Y +Q+T+DG +S H GLV+M A ALA EK FV+ELW+ +P GK RYY +LYM+ + SG F+ Y Sbjct: 54 GAYNTGVYRNLFNEYLGKTDAEIKSKLETAWNQLFYGDDDNERVYYPSGEDMGYMVDIGNGDVRSEGMSYGMMIAVQLDKHEEFDRLWKWTKTNMYQSDGAYQGYFAWHCTTDGKQLEAN---PASDGEEWFVMALLFASARWGNGEGIFDYQAEAQEILNTMLHKEE---TKSDLAT-NMFNWEHKQVVFVPAIGRVSSFTDPSYHLPAYYELWARWAEQDND-----FWFEAAQTSRDYFKKAAHPVTGLMPDYANFDG---TPYGTDDHKDFRFDAWRTLSNVALDHAWFAADPWQVEQSNRVLDFLASEGISSYANQYTLDGTAL--SSEHSTGLVAMAAAAALAADPEK-GKPFVQELWDTQIPSGKWRYYDGLLYMLGFMQVSGNFRIY 430
BLAST of NO04G02180 vs. NCBI_GenBank
Match: WP_004617020.1 (glycoside hydrolase [[Clostridium] papyrosolvens] >EGD48973.1 glycoside hydrolase family 8 [ [[Clostridium] papyrosolvens DSM 2782]) HSP 1 Score: 266.2 bits (679), Expect = 2.800e-67 Identity = 157/421 (37.29%), Postives = 229/421 (54.39%), Query Frame = 0 Query: 261 MLTVAVLLFLIGIVISAARRTGIEALGPGGDDGAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAM------GNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGW-QQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673 +L +A+++ +I I I++A G A TG YRN+F E ++ + KL ++D +FKGD L+ E + A I +T + V SEG+SYG++ CV + K++ F+ LW WAR HM T+G ++ FFAW+ G +IDA PA D + Y A AL+ A R+WG+ + Y+AEA ++ AM G + F P+ ++PSYHLP FY+ +A + G R WS A +SR+FF + + TGL PDY +G GH +F++DAWRA N VD+AWW D W +A + FF +QG YG+Q+T+ G + +S H GLV+MNAV +LA +D FV ELW +P G+ RYY MLYM+ +LH SG F+ + Sbjct: 8 LLVLAMIVSIIPINIASAATGGYYA-----------TGTYRNVFVET-GRTEAQVQDKLAAMYDKFFKGDTNNQRLFYESGSDEAYIRDTGNGDVRSEGMSYGLMVCVQMDKKKEFDMLWKWARNHMYQTSGQFKGFFAWQCNYSGGIIDA---TPASDGDEYFAMALLFAARRWGNGTGIFNYEAEAQTILDAMLHQSDDGVGYNMINKNANQVVFCPSAGNYDFTDPSYHLPAFYELWAMW----GPERDRATWSTVAAKSREFFKKSTNSTTGLNPDYANFDGSAKEVSWSSGHGDFRFDAWRAVQNSCVDYAWWQKDSWPATTFAPKIQAFFKNQGLSSYGNQYTLSG--SKLSSDHSPGLVAMNAVTSLA-QDATTAKPFVDELWNTAVPSGQYRYYDGMLYMLGMLHVSGNFKIW 406
BLAST of NO04G02180 vs. NCBI_GenBank
Match: WP_020816879.1 (glycoside hydrolase [[Clostridium] papyrosolvens] >EPR09329.1 glycoside hydrolase [ [[Clostridium] papyrosolvens C7]) HSP 1 Score: 265.4 bits (677), Expect = 4.900e-67 Identity = 158/421 (37.53%), Postives = 228/421 (54.16%), Query Frame = 0 Query: 261 MLTVAVLLFLIGIVISAARRTGIEALGPGGDDGAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAM------GNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGW-QQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673 +L +A+++ +I I I++A G A TG YRN+F E K+ + KL ++D +FKGD L+ E + A I +T + V SEG+SYGM+ CV + K++ F+ LW WAR HM T+G ++ FFAW+ G +ID+ PA D + Y A AL+ A R+WG+ Y Y+AEA ++ AM G + F P+ ++PSYHLP FY+ +A + G R WS A +SR+FF + + TGL PDY +G GH +F++DAWR N VD+AWW D W +A + FF +QG YG+Q+T+ G + +S H GLV+MNAV +LA +D FV ELW +P G+ RYY MLYM+ +LH SG F+ + Sbjct: 8 LLVLAMIVSIIPINIASAETGGYYA-----------TGNYRNVFVET-GKTEAQVQDKLATMFDKFFKGDTNNQRLFYESGTDEAYIRDTGNGDVRSEGMSYGMMVCVQMDKKKEFDMLWKWARNHMYQTSGQFKGFFAWQCNYSGGIIDS---TPASDGDEYFAMALLFAARRWGNGTGIYNYEAEAQTILDAMLHQSDDGVGYNLINKNQNQVVFCPSAGNYDFTDPSYHLPAFYELWALW----GPERDRATWSTVAAKSREFFKKSTNSTTGLNPDYANFDGSAKEVSWSSGHGDFRFDAWRVIQNSCVDYAWWQKDSWPATTFAPKIQAFFKNQGLSSYGNQYTLSG--SKLSSDHSPGLVAMNAVTSLA-QDATTAKPFVDELWNTAVPSGQYRYYDGMLYMLGMLHVSGNFKIW 406
BLAST of NO04G02180 vs. NCBI_GenBank
Match: WP_027629668.1 (glycoside hydrolase [[Clostridium] cellobioparum]) HSP 1 Score: 265.4 bits (677), Expect = 4.900e-67 Identity = 154/421 (36.58%), Postives = 227/421 (53.92%), Query Frame = 0 Query: 261 MLTVAVLLFLIGIVISAARRTGIEALGPGGDDGAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAM------GNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGW-QQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673 M V L ++ V +A T + A G TG YRN+F E ++ + KL+ ++D +FKGD L+ E + A I +T ++ V SEG+SYGM+ CV + K++ F+ LW WAR HM ++G Y+ FF+W+ G +I D PA D + Y A AL+ A R+WG+ + Y+AEA ++ AM G F + F P ++PSYHLP FY+ +A + K+ D W++ A SR+FF + TGL PDY +G GH++F++DAWR N++VD+AWW D W +A R FF +G +GS +T+ G +N+ H GLV+MNAV AL++ D + FV ELW +P G+ RYY MLYM+ +LH SG F+ + Sbjct: 1 MKRVLAYLLVLTFVFTAVPVTSLNA----ATGGYYSTGSYRNVFVET-GRTETQVKDKLDSMFDKFFKGDTNNQRLFYESGSDEAYIRDTGNSDVRSEGMSYGMMICVQMDKKKEFDMLWKWARNHMYQSSGQYKGFFSWQCNYNGGII---DTTPASDGDEYFAMALLFAARRWGNGTGIFNYEAEAQTILDAMLHQADDGVGVNMFDKTQNQVVFCPNGGSATFTDPSYHLPAFYELWALWDKDANDRTT---WTRIAATSREFFKKSTHATTGLNPDYANFDGTPKDVSWSSGHADFRYDAWRVALNISVDYAWWQKDAWASTTFAPRIQSFFQKEGISTHGSNYTLAGSKLNND--HSPGLVAMNAVTALSS-DVQSAKPFVDELWNTAVPSGQYRYYDGMLYMLGMLHLSGNFKIW 407
BLAST of NO04G02180 vs. NCBI_GenBank
Match: WP_014312615.1 (glycoside hydrolase [Clostridium sp. BNL1100] >AEY65232.1 endoglucanase Y [Clostridium sp. BNL1100]) HSP 1 Score: 264.6 bits (675), Expect = 8.300e-67 Identity = 157/421 (37.29%), Postives = 228/421 (54.16%), Query Frame = 0 Query: 261 MLTVAVLLFLIGIVISAARRTGIEALGPGGDDGAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAM------GNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGW-QQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673 +L +A+++ +I I I++A G A TG YRN+F E ++ + KL ++D +FKGD L+ E + A I +T + V SEG+SYGM+ CV + K++ F+ LW WAR HM T+G ++ FFAW+ G +ID+ PA D + Y A AL+ A R+WG+ Y Y+AEA ++ AM G + F P+ ++PSYHLP FY+ +A + G R WS A +SR+FF + + TGL PDY +G GH +F++DAWR N VD+AWW D W +A + FF +QG YG+Q+T+ G + +S H GLV+MNAV +LA +D FV ELW +P G+ RYY MLYM+ +LH SG F+ + Sbjct: 8 LLVLAMIVSIIPIDIASAATGGYYA-----------TGTYRNVFVET-GRTEAQVQDKLATMFDKFFKGDTNNQRLFYESGTDEAYIRDTGNGDVRSEGMSYGMMVCVQMDKKKEFDMLWKWARNHMYQTSGQFKGFFAWQCNYSGGIIDS---TPASDGDEYFAMALLFAARRWGNGTGIYNYEAEAQTILDAMLHQSDDGVGYNLINKNTNQVVFCPSAGNYDFTDPSYHLPAFYELWALW----GPERDRATWSTVAAKSREFFKKSTNSTTGLNPDYANFDGSAKEVSWSSGHGDFRFDAWRVIQNSCVDYAWWQKDSWPSTTFAPKIQAFFKNQGLSSYGNQYTLSG--SKLSSDHSPGLVAMNAVTSLA-QDATTAKPFVDELWNTAVPSGQYRYYDGMLYMLGMLHVSGEFKIW 406
BLAST of NO04G02180 vs. NCBI_GenBank
Match: WP_004626730.1 (endoglucanase [[Clostridium] termitidis] >EMS71236.1 Endoglucanase Y [ [[Clostridium] termitidis CT1112]) HSP 1 Score: 264.6 bits (675), Expect = 8.300e-67 Identity = 153/421 (36.34%), Postives = 228/421 (54.16%), Query Frame = 0 Query: 261 MLTVAVLLFLIGIVISAARRTGIEALGPGGDDGAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAM------GNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGW-QQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673 M V L ++ V +A T + A G TG YRN+F E ++ + KL+ ++D +FKGD L+ E + A I +T ++ V SEG+SYGM+ CV + K++ F+ LW WAR HM ++G Y+ FF+W+ G +I D PA D + Y A AL+ A R+WG+ + Y+AEA ++ AM G F + F P ++PSYHLP FY+ +A + K+ D W++ A SR+FF + TGL PDY +G GH++F++DAWR +N++VD+AWW D W +A + FF +G +GS +T+ G +N+ H GLV+MNAV AL++ D + FV ELW +P G+ RYY MLYM+ +LH SG F+ + Sbjct: 1 MKRVLACLLVLTFVFTAVPVTSLNA----ATGGYYSTGSYRNVFVET-GRTEAQVKDKLDSMFDKFFKGDTNNQRLFYESGSDEAYIRDTGNSDVRSEGMSYGMMICVQMDKKKEFDMLWKWARNHMYQSSGQYKGFFSWQCNYNGGII---DTTPASDGDEYFAMALLFAARRWGNGTGIFNYEAEAQTILDAMLHQADDGVGVNMFDKTQNQVVFCPNGGSATFTDPSYHLPAFYELWALWDKDANDRTT---WTRIAATSREFFKKSTHATTGLNPDYANFDGTPKDVSWSSGHADFRYDAWRVASNISVDYAWWQKDAWASTTFAPKIQSFFKKEGISTHGSNYTLAGSKLNND--HSPGLVAMNAVTALSS-DVQSAKPFVDELWNTAVPSGQYRYYDGMLYMLGMLHLSGSFKIW 407
BLAST of NO04G02180 vs. NCBI_GenBank
Match: WP_051312827.1 (T9SS C-terminal target domain-containing protein [Sporocytophaga myxococcoides]) HSP 1 Score: 263.1 bits (671), Expect = 2.400e-66 Identity = 146/411 (35.52%), Postives = 226/411 (54.99%), Query Frame = 0 Query: 270 LIGIVISAARRTGIEALGPGGDDGAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAMGNSKKG------FFTKDGK-ATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGWQQKYADRFLGFFASQGPKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673 L+ + + R T + L GA TG+YRN+F E+++K+ E +TK+ + F G+ + LY EV +MA I++ +N V SEG+SYG++ CV L KQ FN++W WA+ +M HT+G + +F W + G AKD PAPD EAY TAL A +WG+ Y Y AEA +++ + SK G F + K TF P +++PSY+LP F++ ++R+ FW+++ +RK A+ +GL DY+ +G + F +DAWR+ N+ +D+ W+ D Q A+R+L FF +QG Y S + +G ++ N G GLV+ NAV +LAT + L + FV+ W +P G+ RYY MLYM++LL+ SG F+ + Sbjct: 16 LLVLALCTYRNTQAQDLCNETGQGAYFTGVYRNMFKELLNKNDTEINTKVNNAFQQIFHGNSNQQ-LYYEVGQDMAYILDVANNDVRSEGMSYGLMICVQLDKQTEFNKIWKWAKTYMHHTSGNLDGYFRWSLNTSG---SAKDNNPAPDGEAYFVTALFFAANRWGNGTGIYNYYAEAQSILNKI-QSKTGAGGINNLFNANSKLITFGPNSGSYDYTDPSYNLPAFWELWSRWSTTN-----KTFWAQTPAAARKLLRDASHSSSGLTTDYSNFDGTPKTTSFNGDSHKFMYDAWRSIMNIGMDYHWFKADAQQPVIAERYLTFFKNQGANYNSHYDWNG--SNGNGGQSGGLVACNAVASLATSNTALSTPFVQAFWNMAIPSGQWRYYDGMLYMLALLNVSGNFKVW 414
BLAST of NO04G02180 vs. NCBI_GenBank
Match: OGO09837.1 (glycoside hydrolase, partial [Chloroflexi bacterium RBG_13_60_9]) HSP 1 Score: 263.1 bits (671), Expect = 2.400e-66 Identity = 148/367 (40.33%), Postives = 207/367 (56.40%), Query Frame = 0 Query: 297 TGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAM--------GNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGWQQKYADRFLGFFASQGPK-YGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYY 654 TG YRNLF E + K+ V+ KL+ W F GD +Y V ++A +++ +N V SEG+SYGM+ V L +QE FNRLW W R M + G Y +FAW R G + A PA D E + TAL A ++WG + Y+AEA ++H M G + F + F P+ ++PSYHLP FY+ +A + + FWS++A++SRKFFH+AA P TGL+PDY+ +G P H +F++DAWR ANVAVD+AW+ D WQ +DR L F ASQ YG+Q++++GK+ + H GLV+M V ALA E + SFV+ELW+ +P G RYY Sbjct: 64 TGRYRNLFEEYLGKTGVQIQAKLDAAWGQLFYGDDSSERVYYPVGDDLAYMLDVGNNDVRSEGMSYGMMIAVQLDRQEEFNRLWKWTRAFMYQSDGPYRGYFAWHCDRDGKQLAAN---PASDGEEWFITALFFASKRWGDGEGIFNYRAEADAILHTMRTKTAEGNGIATDMFDPAAKQVVFVPSGRNSTFTDPSYHLPAFYELWALWAAEDN-----AFWSEAAVESRKFFHLAAHPVTGLMPDYSNFDG----TPTGGEHEDFRFDAWRTLANVAVDFAWFGKDPWQVDQSDRVLAFLASQDSGFYGNQYSLEGKVLSGD--HSTGLVAMAGVAALAAHRE-IGESFVRELWDAKIPRGTWRYY 415
BLAST of NO04G02180 vs. NCBI_GenBank
Match: WP_025705725.1 (hypothetical protein [Paenibacillus graminis]) HSP 1 Score: 262.3 bits (669), Expect = 4.100e-66 Identity = 156/387 (40.31%), Postives = 211/387 (54.52%), Query Frame = 0 Query: 293 GAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAM----GNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEG-HSNFQWDAWRAPANVAVDWAWWNMDGWQQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673 GA +G+YRNLF E KS E D K+ + F GD + +Y V +MA I++ +N V SEG+SYGM+ V L K+ F+RLW WA+ +MQ+T+GT + +FAW+V G ID PA D E Y TAL+ A +WGS Y Y EA L+ + + K F + F P S+PSYHLP FY+ +A + N + W +A SR+FF A TGL PDY +G+ PN G H +F++DAWR NVA+D+ W+ D WQ+ YADR FF QG Y +Q+++ G + ++ H GLV+ NAV LA K FV E W +P G+ RYY LYM+SLLH SG F+ Y Sbjct: 171 GAFYSGVYRNLFKE-FGKSDAEIDAKVNTAFQQLFYGDNDTQRIYYPVGTDMAYILDKANNDVRSEGMSYGMMIAVQLDKKAEFDRLWKWAKTYMQNTSGTQQGYFAWQVDTSGNKIDTN---PASDGEEYFITALLFAANRWGSGTGIYNYSTEAQTLLDRVLTPNSDQKTLFDLTQKQVVFVPYGSAAGFSDPSYHLPAFYELWALWDNNNN-----QLWRDAAATSREFFKKQAHSTTGLGPDYAEFDGR----PNNTGNHGDFRFDAWRTIMNVAMDYHWFAKDSWQKTYADRVQNFFHGQGIGAYANQYSLSG--SSLSTDHSPGLVATNAVGTLAATTTKSW-EFVNEFWNTSIPSGQYRYYDGCLYMLSLLHASGNFKIY 541
BLAST of NO04G02180 vs. NCBI_GenBank
Match: GAL86385.1 (bifunctional xylanase/esterase [Sporocytophaga myxococcoides]) HSP 1 Score: 261.9 bits (668), Expect = 5.400e-66 Identity = 144/389 (37.02%), Postives = 215/389 (55.27%), Query Frame = 0 Query: 292 DGAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAMGNSKKG-------FFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGWQQKYADRFLGFFASQGPKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673 +GA TG+YRN+F E+++KS E +TK+ + F G + LY EV + A I++ +N V SEG+SYG++ CV L KQ FN+LW W + +M HT+G + FF W + G AKD PAPD EAY ATAL A +WG+ + Y++EA ++ + SK G F T TF P ++PSY+LP F++ +AR+ + FW+++ +RK A+ +GL DY+ +G S F +DAWR+ N+ +D+ W+ D Q A+R+L FF +QG Y + + +G A + H GLV+ NAV +LAT + L + FV+E W +P G RYY MLYM+++L+ SG F+ Y Sbjct: 419 EGAYFTGVYRNMFKELLNKSDTEINTKINNAFQQIFYGSANQK-LYYEVGQDQAYILDVANNDVRSEGMSYGLMICVQLNKQAEFNKLWRWTKNYMHHTSGNLDGFFKWSLNTDG---SAKDNNPAPDGEAYFATALFFAANRWGNGTGIFNYESEAQSILSKV-QSKTGAGGINNLFNTNSKLITFGPNQGSYDFTDPSYNLPAFWELWARWSTSN-----KAFWAQTPAAARKLLRDASHSSSGLTTDYSNFDGTPKSTSFNSDSHRFMYDAWRSIMNIGMDYHWFKADALQPAIAERYLTFFKNQGSGYKNHYDWNGSNAGGD--HSTGLVACNAVASLATTNTTLSTPFVQEFWNIAVPTGTYRYYDGMLYMLAILNVSGNFKVY 795 The following BLAST results are available for this feature:
BLAST of NO04G02180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G02180 ID=NO04G02180|Name=NO04G02180|organism=Nannochloropsis oceanica|type=gene|length=3683bpback to top protein sequence of NO04G02180.1 >NO04G02180.1-protein ID=NO04G02180.1-protein|Name=NO04G02180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=674bpback to top Synonyms
Publications
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