NO04G02180, NO04G02180 (gene) Nannochloropsis oceanica

Overview
NameNO04G02180
Unique NameNO04G02180
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3683
Alignment locationchr4:625779..629461 +

Link to JBrowse

Properties
Property NameValue
DescriptionGlycoside hydrolase family 8
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:625779..629461 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR0089286-hairpin_glycosidase-like
IPR002037Glyco_hydro_8
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO04G02180 vs. NCBI_GenBank
Match: PKO19013.1 (glycoside hydrolase [Chloroflexi bacterium HGW-Chloroflexi-10])

HSP 1 Score: 266.5 bits (680), Expect = 2.200e-67
Identity = 149/395 (37.72%), Postives = 222/395 (56.20%), Query Frame = 0
Query:  293 GAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAMGNSKKGFFTKDGKATFNPTDWGLRH-------------SNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGWQQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673
            GA  TG+YRNLF E + K+  E  +KLE  W+  F GD +   +Y     +M  +++  +  V SEG+SYGM+  V L K E F+RLW W + +M  + G Y+ +FAW  T  G  ++A    PA D E +   AL+ A  +WG+    + Y+AEA  +++ M + ++   TK   AT N  +W  +              ++PSYHLP +Y+ +AR+ + + D     FW ++A  SR +F  AA P TGL+PDY   +G   +    + H +F++DAWR  +NVA+D AW+  D WQ + ++R L F AS+G   Y +Q+T+DG     +S H  GLV+M A  ALA   EK    FV+ELW+  +P GK RYY  +LYM+  +  SG F+ Y
Sbjct:   54 GAYNTGVYRNLFNEYLGKTDAEIKSKLETAWNQLFYGDDDNERVYYPSGEDMGYMVDIGNGDVRSEGMSYGMMIAVQLDKHEEFDRLWKWTKTNMYQSDGAYQGYFAWHCTTDGKQLEAN---PASDGEEWFVMALLFASARWGNGEGIFDYQAEAQEILNTMLHKEE---TKSDLAT-NMFNWEHKQVVFVPAIGRVSSFTDPSYHLPAYYELWARWAEQDND-----FWFEAAQTSRDYFKKAAHPVTGLMPDYANFDG---TPYGTDDHKDFRFDAWRTLSNVALDHAWFAADPWQVEQSNRVLDFLASEGISSYANQYTLDGTAL--SSEHSTGLVAMAAAAALAADPEK-GKPFVQELWDTQIPSGKWRYYDGLLYMLGFMQVSGNFRIY 430          
BLAST of NO04G02180 vs. NCBI_GenBank
Match: WP_004617020.1 (glycoside hydrolase [[Clostridium] papyrosolvens] >EGD48973.1 glycoside hydrolase family 8 [ [[Clostridium] papyrosolvens DSM 2782])

HSP 1 Score: 266.2 bits (679), Expect = 2.800e-67
Identity = 157/421 (37.29%), Postives = 229/421 (54.39%), Query Frame = 0
Query:  261 MLTVAVLLFLIGIVISAARRTGIEALGPGGDDGAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAM------GNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGW-QQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673
            +L +A+++ +I I I++A   G  A           TG YRN+F E   ++  +   KL  ++D +FKGD     L+ E   + A I +T +  V SEG+SYG++ CV + K++ F+ LW WAR HM  T+G ++ FFAW+    G +IDA    PA D + Y A AL+ A R+WG+    + Y+AEA  ++ AM      G           +  F P+      ++PSYHLP FY+ +A +    G  R    WS  A +SR+FF  + +  TGL PDY   +G         GH +F++DAWRA  N  VD+AWW  D W    +A +   FF +QG   YG+Q+T+ G  +  +S H  GLV+MNAV +LA +D      FV ELW   +P G+ RYY  MLYM+ +LH SG F+ +
Sbjct:    8 LLVLAMIVSIIPINIASAATGGYYA-----------TGTYRNVFVET-GRTEAQVQDKLAAMYDKFFKGDTNNQRLFYESGSDEAYIRDTGNGDVRSEGMSYGLMVCVQMDKKKEFDMLWKWARNHMYQTSGQFKGFFAWQCNYSGGIIDA---TPASDGDEYFAMALLFAARRWGNGTGIFNYEAEAQTILDAMLHQSDDGVGYNMINKNANQVVFCPSAGNYDFTDPSYHLPAFYELWAMW----GPERDRATWSTVAAKSREFFKKSTNSTTGLNPDYANFDGSAKEVSWSSGHGDFRFDAWRAVQNSCVDYAWWQKDSWPATTFAPKIQAFFKNQGLSSYGNQYTLSG--SKLSSDHSPGLVAMNAVTSLA-QDATTAKPFVDELWNTAVPSGQYRYYDGMLYMLGMLHVSGNFKIW 406          
BLAST of NO04G02180 vs. NCBI_GenBank
Match: WP_020816879.1 (glycoside hydrolase [[Clostridium] papyrosolvens] >EPR09329.1 glycoside hydrolase [ [[Clostridium] papyrosolvens C7])

HSP 1 Score: 265.4 bits (677), Expect = 4.900e-67
Identity = 158/421 (37.53%), Postives = 228/421 (54.16%), Query Frame = 0
Query:  261 MLTVAVLLFLIGIVISAARRTGIEALGPGGDDGAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAM------GNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGW-QQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673
            +L +A+++ +I I I++A   G  A           TG YRN+F E   K+  +   KL  ++D +FKGD     L+ E   + A I +T +  V SEG+SYGM+ CV + K++ F+ LW WAR HM  T+G ++ FFAW+    G +ID+    PA D + Y A AL+ A R+WG+    Y Y+AEA  ++ AM      G           +  F P+      ++PSYHLP FY+ +A +    G  R    WS  A +SR+FF  + +  TGL PDY   +G         GH +F++DAWR   N  VD+AWW  D W    +A +   FF +QG   YG+Q+T+ G  +  +S H  GLV+MNAV +LA +D      FV ELW   +P G+ RYY  MLYM+ +LH SG F+ +
Sbjct:    8 LLVLAMIVSIIPINIASAETGGYYA-----------TGNYRNVFVET-GKTEAQVQDKLATMFDKFFKGDTNNQRLFYESGTDEAYIRDTGNGDVRSEGMSYGMMVCVQMDKKKEFDMLWKWARNHMYQTSGQFKGFFAWQCNYSGGIIDS---TPASDGDEYFAMALLFAARRWGNGTGIYNYEAEAQTILDAMLHQSDDGVGYNLINKNQNQVVFCPSAGNYDFTDPSYHLPAFYELWALW----GPERDRATWSTVAAKSREFFKKSTNSTTGLNPDYANFDGSAKEVSWSSGHGDFRFDAWRVIQNSCVDYAWWQKDSWPATTFAPKIQAFFKNQGLSSYGNQYTLSG--SKLSSDHSPGLVAMNAVTSLA-QDATTAKPFVDELWNTAVPSGQYRYYDGMLYMLGMLHVSGNFKIW 406          
BLAST of NO04G02180 vs. NCBI_GenBank
Match: WP_027629668.1 (glycoside hydrolase [[Clostridium] cellobioparum])

HSP 1 Score: 265.4 bits (677), Expect = 4.900e-67
Identity = 154/421 (36.58%), Postives = 227/421 (53.92%), Query Frame = 0
Query:  261 MLTVAVLLFLIGIVISAARRTGIEALGPGGDDGAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAM------GNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGW-QQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673
            M  V   L ++  V +A   T + A       G   TG YRN+F E   ++  +   KL+ ++D +FKGD     L+ E   + A I +T ++ V SEG+SYGM+ CV + K++ F+ LW WAR HM  ++G Y+ FF+W+    G +I   D  PA D + Y A AL+ A R+WG+    + Y+AEA  ++ AM      G     F     +  F P       ++PSYHLP FY+ +A + K+  D      W++ A  SR+FF  +    TGL PDY   +G         GH++F++DAWR   N++VD+AWW  D W    +A R   FF  +G   +GS +T+ G   +N+  H  GLV+MNAV AL++ D +    FV ELW   +P G+ RYY  MLYM+ +LH SG F+ +
Sbjct:    1 MKRVLAYLLVLTFVFTAVPVTSLNA----ATGGYYSTGSYRNVFVET-GRTETQVKDKLDSMFDKFFKGDTNNQRLFYESGSDEAYIRDTGNSDVRSEGMSYGMMICVQMDKKKEFDMLWKWARNHMYQSSGQYKGFFSWQCNYNGGII---DTTPASDGDEYFAMALLFAARRWGNGTGIFNYEAEAQTILDAMLHQADDGVGVNMFDKTQNQVVFCPNGGSATFTDPSYHLPAFYELWALWDKDANDRTT---WTRIAATSREFFKKSTHATTGLNPDYANFDGTPKDVSWSSGHADFRYDAWRVALNISVDYAWWQKDAWASTTFAPRIQSFFQKEGISTHGSNYTLAGSKLNND--HSPGLVAMNAVTALSS-DVQSAKPFVDELWNTAVPSGQYRYYDGMLYMLGMLHLSGNFKIW 407          
BLAST of NO04G02180 vs. NCBI_GenBank
Match: WP_014312615.1 (glycoside hydrolase [Clostridium sp. BNL1100] >AEY65232.1 endoglucanase Y [Clostridium sp. BNL1100])

HSP 1 Score: 264.6 bits (675), Expect = 8.300e-67
Identity = 157/421 (37.29%), Postives = 228/421 (54.16%), Query Frame = 0
Query:  261 MLTVAVLLFLIGIVISAARRTGIEALGPGGDDGAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAM------GNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGW-QQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673
            +L +A+++ +I I I++A   G  A           TG YRN+F E   ++  +   KL  ++D +FKGD     L+ E   + A I +T +  V SEG+SYGM+ CV + K++ F+ LW WAR HM  T+G ++ FFAW+    G +ID+    PA D + Y A AL+ A R+WG+    Y Y+AEA  ++ AM      G           +  F P+      ++PSYHLP FY+ +A +    G  R    WS  A +SR+FF  + +  TGL PDY   +G         GH +F++DAWR   N  VD+AWW  D W    +A +   FF +QG   YG+Q+T+ G  +  +S H  GLV+MNAV +LA +D      FV ELW   +P G+ RYY  MLYM+ +LH SG F+ +
Sbjct:    8 LLVLAMIVSIIPIDIASAATGGYYA-----------TGTYRNVFVET-GRTEAQVQDKLATMFDKFFKGDTNNQRLFYESGTDEAYIRDTGNGDVRSEGMSYGMMVCVQMDKKKEFDMLWKWARNHMYQTSGQFKGFFAWQCNYSGGIIDS---TPASDGDEYFAMALLFAARRWGNGTGIYNYEAEAQTILDAMLHQSDDGVGYNLINKNTNQVVFCPSAGNYDFTDPSYHLPAFYELWALW----GPERDRATWSTVAAKSREFFKKSTNSTTGLNPDYANFDGSAKEVSWSSGHGDFRFDAWRVIQNSCVDYAWWQKDSWPSTTFAPKIQAFFKNQGLSSYGNQYTLSG--SKLSSDHSPGLVAMNAVTSLA-QDATTAKPFVDELWNTAVPSGQYRYYDGMLYMLGMLHVSGEFKIW 406          
BLAST of NO04G02180 vs. NCBI_GenBank
Match: WP_004626730.1 (endoglucanase [[Clostridium] termitidis] >EMS71236.1 Endoglucanase Y [ [[Clostridium] termitidis CT1112])

HSP 1 Score: 264.6 bits (675), Expect = 8.300e-67
Identity = 153/421 (36.34%), Postives = 228/421 (54.16%), Query Frame = 0
Query:  261 MLTVAVLLFLIGIVISAARRTGIEALGPGGDDGAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAM------GNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGW-QQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673
            M  V   L ++  V +A   T + A       G   TG YRN+F E   ++  +   KL+ ++D +FKGD     L+ E   + A I +T ++ V SEG+SYGM+ CV + K++ F+ LW WAR HM  ++G Y+ FF+W+    G +I   D  PA D + Y A AL+ A R+WG+    + Y+AEA  ++ AM      G     F     +  F P       ++PSYHLP FY+ +A + K+  D      W++ A  SR+FF  +    TGL PDY   +G         GH++F++DAWR  +N++VD+AWW  D W    +A +   FF  +G   +GS +T+ G   +N+  H  GLV+MNAV AL++ D +    FV ELW   +P G+ RYY  MLYM+ +LH SG F+ +
Sbjct:    1 MKRVLACLLVLTFVFTAVPVTSLNA----ATGGYYSTGSYRNVFVET-GRTEAQVKDKLDSMFDKFFKGDTNNQRLFYESGSDEAYIRDTGNSDVRSEGMSYGMMICVQMDKKKEFDMLWKWARNHMYQSSGQYKGFFSWQCNYNGGII---DTTPASDGDEYFAMALLFAARRWGNGTGIFNYEAEAQTILDAMLHQADDGVGVNMFDKTQNQVVFCPNGGSATFTDPSYHLPAFYELWALWDKDANDRTT---WTRIAATSREFFKKSTHATTGLNPDYANFDGTPKDVSWSSGHADFRYDAWRVASNISVDYAWWQKDAWASTTFAPKIQSFFKKEGISTHGSNYTLAGSKLNND--HSPGLVAMNAVTALSS-DVQSAKPFVDELWNTAVPSGQYRYYDGMLYMLGMLHLSGSFKIW 407          
BLAST of NO04G02180 vs. NCBI_GenBank
Match: WP_051312827.1 (T9SS C-terminal target domain-containing protein [Sporocytophaga myxococcoides])

HSP 1 Score: 263.1 bits (671), Expect = 2.400e-66
Identity = 146/411 (35.52%), Postives = 226/411 (54.99%), Query Frame = 0
Query:  270 LIGIVISAARRTGIEALGPGGDDGAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAMGNSKKG------FFTKDGK-ATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGWQQKYADRFLGFFASQGPKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673
            L+ + +   R T  + L      GA  TG+YRN+F E+++K+  E +TK+   +   F G+  +  LY EV  +MA I++  +N V SEG+SYG++ CV L KQ  FN++W WA+ +M HT+G  + +F W +   G    AKD  PAPD EAY  TAL  A  +WG+    Y Y AEA  +++ +  SK G       F  + K  TF P      +++PSY+LP F++ ++R+           FW+++   +RK    A+   +GL  DY+  +G   +         F +DAWR+  N+ +D+ W+  D  Q   A+R+L FF +QG  Y S +  +G  ++ N G   GLV+ NAV +LAT +  L + FV+  W   +P G+ RYY  MLYM++LL+ SG F+ +
Sbjct:   16 LLVLALCTYRNTQAQDLCNETGQGAYFTGVYRNMFKELLNKNDTEINTKVNNAFQQIFHGNSNQQ-LYYEVGQDMAYILDVANNDVRSEGMSYGLMICVQLDKQTEFNKIWKWAKTYMHHTSGNLDGYFRWSLNTSG---SAKDNNPAPDGEAYFVTALFFAANRWGNGTGIYNYYAEAQSILNKI-QSKTGAGGINNLFNANSKLITFGPNSGSYDYTDPSYNLPAFWELWSRWSTTN-----KTFWAQTPAAARKLLRDASHSSSGLTTDYSNFDGTPKTTSFNGDSHKFMYDAWRSIMNIGMDYHWFKADAQQPVIAERYLTFFKNQGANYNSHYDWNG--SNGNGGQSGGLVACNAVASLATSNTALSTPFVQAFWNMAIPSGQWRYYDGMLYMLALLNVSGNFKVW 414          
BLAST of NO04G02180 vs. NCBI_GenBank
Match: OGO09837.1 (glycoside hydrolase, partial [Chloroflexi bacterium RBG_13_60_9])

HSP 1 Score: 263.1 bits (671), Expect = 2.400e-66
Identity = 148/367 (40.33%), Postives = 207/367 (56.40%), Query Frame = 0
Query:  297 TGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAM--------GNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGWQQKYADRFLGFFASQGPK-YGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYY 654
            TG YRNLF E + K+ V+   KL+  W   F GD     +Y  V  ++A +++  +N V SEG+SYGM+  V L +QE FNRLW W R  M  + G Y  +FAW   R G  + A    PA D E +  TAL  A ++WG     + Y+AEA  ++H M        G +   F     +  F P+      ++PSYHLP FY+ +A +   +       FWS++A++SRKFFH+AA P TGL+PDY+  +G     P    H +F++DAWR  ANVAVD+AW+  D WQ   +DR L F ASQ    YG+Q++++GK+   +  H  GLV+M  V ALA   E +  SFV+ELW+  +P G  RYY
Sbjct:   64 TGRYRNLFEEYLGKTGVQIQAKLDAAWGQLFYGDDSSERVYYPVGDDLAYMLDVGNNDVRSEGMSYGMMIAVQLDRQEEFNRLWKWTRAFMYQSDGPYRGYFAWHCDRDGKQLAAN---PASDGEEWFITALFFASKRWGDGEGIFNYRAEADAILHTMRTKTAEGNGIATDMFDPAAKQVVFVPSGRNSTFTDPSYHLPAFYELWALWAAEDN-----AFWSEAAVESRKFFHLAAHPVTGLMPDYSNFDG----TPTGGEHEDFRFDAWRTLANVAVDFAWFGKDPWQVDQSDRVLAFLASQDSGFYGNQYSLEGKVLSGD--HSTGLVAMAGVAALAAHRE-IGESFVRELWDAKIPRGTWRYY 415          
BLAST of NO04G02180 vs. NCBI_GenBank
Match: WP_025705725.1 (hypothetical protein [Paenibacillus graminis])

HSP 1 Score: 262.3 bits (669), Expect = 4.100e-66
Identity = 156/387 (40.31%), Postives = 211/387 (54.52%), Query Frame = 0
Query:  293 GAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAM----GNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEG-HSNFQWDAWRAPANVAVDWAWWNMDGWQQKYADRFLGFFASQG-PKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673
            GA  +G+YRNLF E   KS  E D K+   +   F GD +   +Y  V  +MA I++  +N V SEG+SYGM+  V L K+  F+RLW WA+ +MQ+T+GT + +FAW+V   G  ID     PA D E Y  TAL+ A  +WGS    Y Y  EA  L+  +     + K  F     +  F P       S+PSYHLP FY+ +A +  N       + W  +A  SR+FF   A   TGL PDY   +G+    PN  G H +F++DAWR   NVA+D+ W+  D WQ+ YADR   FF  QG   Y +Q+++ G  +  ++ H  GLV+ NAV  LA    K    FV E W   +P G+ RYY   LYM+SLLH SG F+ Y
Sbjct:  171 GAFYSGVYRNLFKE-FGKSDAEIDAKVNTAFQQLFYGDNDTQRIYYPVGTDMAYILDKANNDVRSEGMSYGMMIAVQLDKKAEFDRLWKWAKTYMQNTSGTQQGYFAWQVDTSGNKIDTN---PASDGEEYFITALLFAANRWGSGTGIYNYSTEAQTLLDRVLTPNSDQKTLFDLTQKQVVFVPYGSAAGFSDPSYHLPAFYELWALWDNNNN-----QLWRDAAATSREFFKKQAHSTTGLGPDYAEFDGR----PNNTGNHGDFRFDAWRTIMNVAMDYHWFAKDSWQKTYADRVQNFFHGQGIGAYANQYSLSG--SSLSTDHSPGLVATNAVGTLAATTTKSW-EFVNEFWNTSIPSGQYRYYDGCLYMLSLLHASGNFKIY 541          
BLAST of NO04G02180 vs. NCBI_GenBank
Match: GAL86385.1 (bifunctional xylanase/esterase [Sporocytophaga myxococcoides])

HSP 1 Score: 261.9 bits (668), Expect = 5.400e-66
Identity = 144/389 (37.02%), Postives = 215/389 (55.27%), Query Frame = 0
Query:  292 DGAAGTGIYRNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINTESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAWRVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIA-YPYKAEAMRLIHAMGNSKKG-------FFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNEGDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGHSNFQWDAWRAPANVAVDWAWWNMDGWQQKYADRFLGFFASQGPKYGSQFTMDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKGRYYPAMLYMMSLLHCSGRFQAY 673
            +GA  TG+YRN+F E+++KS  E +TK+   +   F G   +  LY EV  + A I++  +N V SEG+SYG++ CV L KQ  FN+LW W + +M HT+G  + FF W +   G    AKD  PAPD EAY ATAL  A  +WG+    + Y++EA  ++  +  SK G       F T     TF P       ++PSY+LP F++ +AR+  +        FW+++   +RK    A+   +GL  DY+  +G   S         F +DAWR+  N+ +D+ W+  D  Q   A+R+L FF +QG  Y + +  +G  A  +  H  GLV+ NAV +LAT +  L + FV+E W   +P G  RYY  MLYM+++L+ SG F+ Y
Sbjct:  419 EGAYFTGVYRNMFKELLNKSDTEINTKINNAFQQIFYGSANQK-LYYEVGQDQAYILDVANNDVRSEGMSYGLMICVQLNKQAEFNKLWRWTKNYMHHTSGNLDGFFKWSLNTDG---SAKDNNPAPDGEAYFATALFFAANRWGNGTGIFNYESEAQSILSKV-QSKTGAGGINNLFNTNSKLITFGPNQGSYDFTDPSYNLPAFWELWARWSTSN-----KAFWAQTPAAARKLLRDASHSSSGLTTDYSNFDGTPKSTSFNSDSHRFMYDAWRSIMNIGMDYHWFKADALQPAIAERYLTFFKNQGSGYKNHYDWNGSNAGGD--HSTGLVACNAVASLATTNTTLSTPFVQEFWNIAVPTGTYRYYDGMLYMLAILNVSGNFKVY 795          
The following BLAST results are available for this feature:
BLAST of NO04G02180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
PKO19013.12.200e-6737.72glycoside hydrolase [Chloroflexi bacterium HGW-Chl... [more]
WP_004617020.12.800e-6737.29glycoside hydrolase [[Clostridium] papyrosolvens] ... [more]
WP_020816879.14.900e-6737.53glycoside hydrolase [[Clostridium] papyrosolvens] ... [more]
WP_027629668.14.900e-6736.58glycoside hydrolase [[Clostridium] cellobioparum][more]
WP_014312615.18.300e-6737.29glycoside hydrolase [Clostridium sp. BNL1100] >AEY... [more]
WP_004626730.18.300e-6736.34endoglucanase [[Clostridium] termitidis] >EMS71236... [more]
WP_051312827.12.400e-6635.52T9SS C-terminal target domain-containing protein [... [more]
OGO09837.12.400e-6640.33glycoside hydrolase, partial [Chloroflexi bacteriu... [more]
WP_025705725.14.100e-6640.31hypothetical protein [Paenibacillus graminis][more]
GAL86385.15.400e-6637.02bifunctional xylanase/esterase [Sporocytophaga myx... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL079nonsL079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR109ngnoR109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009581NSK009581Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G02180.1NO04G02180.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578732gene_2010Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100009g111gene1964Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G02180.1NO04G02180.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G02180 ID=NO04G02180|Name=NO04G02180|organism=Nannochloropsis oceanica|type=gene|length=3683bp
ACAGGAAGGCGCGCTTTTACAAGCCGGGCAAGTTCCTTCAAGACCAGCAG
TTCCCGAAGCCAGGAGAGGCGCGTTGATCTCTTGACGAGCTGGGGGGCAA
TGGGTCGCAACCTGGTGGCCTCTGCCACCGACGACATCGACTATgtaagt
acataccgcaaaggacacatgaacgagattgccttaacgtgtattgggga
aagtggcggtctccgaccaagtcgacgtcaataggagcgaagatttgtcc
tttcttgcagggcccgtcgagcggcacgtccagacggtttccaaaggctt
gaccgtgcgcacgccggcatgcctggagggaaaggcggggaagagacgcg
tgaaggagacgagagtgcactgtggagtgtagttggcaatgtccaccccc
gctttattccggaacaaacgttggccccaaagtttactctaggcatcttc
tacaggcacactattttcgcctttgggtgtgcttgaccggagcttggctg
catgtgtgcgttaataagcaggctgaacttgtctgctgtcatgccacgtg
cttgcttttccctttcttggctgtctgccagcttctccccccccccacct
ccccacgggaatccgtaattaggtgacctcccctctagaccatctactaa
gtccccatactcccctccccccgtcctttttaccctatgctacaataagC
CTTTCAACACAGACGTCAGAAGCAGTCCTTGGCGCGTCCCCCGCGAAAAT
GGCCCAGCCGCAGCCAATGCTGCCCCCAACACCTCCGCTTTTACCGAGAA
CTCTTTTCGCAAACACACGAAGGGCATAATACCAGCCGATTCCATCCCCT
CTACACTTCCTGCCACATCCTCAGTGAAAGCAGCCGCAGTCATGGGCGGG
AGGGCTTCGCCTGGTCGTAAGTCGTCACCTTCCTCGGACTTAACCTCCAC
CTCCTCCATCTCCTCCATTTCAGCACATGGCCCCTCCTCCATCTGGTCAG
CCACTGCTGCGGCTGCCATTGCCGCTGCATCTTTTAAAGGGAAAACCAGC
AGCACCAACAGAAGCGTTCATTCTCCTCGTCCTCCCAAGCCCCTCCGTCC
ACACACCCCTACCTCCAATACTACAGACGGCAGTCTTCCCACCGCCAATT
CTCGATTGGACCCCCGTTTCCATTCATTTCGGCGTGCCGACCCCTTGGCT
ACCTCCTCCTTCACCGACAATGGTGGAGATGACGACATTCTGCCTTTTAA
CGTCGAATCAGGGCAAGCAGGGGGGGAGGACGCGTTTGGATTAGGGGGGC
ACCCCGGTTTTTTTTCCAAGGATTCGTACAAAATCCTCCCTCACCGACGA
GAGCCACCGAAAGGGTGGATGGACAACTTGCCTCCGTTTCTGAATCCTCG
CAAATTGACGCGTCGACAGCAAGCGCTGTGCCTGATGCTTACTGTGGCCG
TCCTTCTTTTCCTGATCGGCATTGTCATTTCAGCGGCAAGGCGGACAGGC
ATCGAAGCCCTTGGCCCTGGGGGGGATGACGGCGCGGCGGGGACGGGCAT
TTATAGGAATCTCTTCACAGAGGTGATGGATAAGTCTATTGTTGAGACGG
ACACGAAATTGGAGGGGGTATGGGACAACTATTTCAAGGGGGATATCGAA
AAGACAGGGTTGTATGTTGAAGTGGAACCAAACATGGCTCAGATTATTAA
TACGGAGAGTAATGTGGTGACTTCTGAGGGGATCAGCTATGGGATGATAA
CGTGTGTACATTTACAGAAGCAGGAGGCGTTCAACCGGCTGTGGAACTGG
GCCCGCTTTCACATGCAGCACACGGCGGGCACGTACGAGACATTTTTCGC
CTGGCGTGTCACGCGCGGTGGCCTACTCATCGATGCGAAAGACGTGGTCC
CCGCCCCGGACGCAGAAGCTTACATTGCAACAGCTCTCATAGCAGCACAT
CGGAAATGGGGCTCCAGCATTGCGTATCCATACAAAGCGGAAGCAATGCG
CCTCATCCACGCCATGGGAAACTCGAAAAAAGGCTTTTTCACCAAAGACG
GGAAAGCCACCTTCAACCCGACTGACTGGGGGCTCAGGCACTCCAACCCG
TCATACCACCTCCCCCACTTCTACCAAGCTTTCGCCCGATTCCTCAAAAA
TGAAGGCGACCCACGCGCGGCCAAGTTCTGGTCCAAGTCCGCGATGCAAA
GCCGGAAGTTCTTCCACGTGGCCGCTGATCCCAAAACGGGGCTCATTCCT
GACTACACCACGTTGGAAGGGAAGGGAGCGTCGGATCCTAATTTGGAGGG
GCATAGTAATTTTCAGTGGGATGCGTGGAGAGCCCCGGCAAATGTGGCAG
TGGACTGGGCGTGGTGGAACATGGACGGGTGGCAACAGAAGTATGCAGAT
CGTTTCTTGGGTTTTTTTGCAAGTCAAGGACCGAAGTACGGGAGTCAATT
CACAATGGATGGGAAGCTTGCCGACAACAACTCAGGGCATGATGCGGGTC
TTGTGAGCATGAATGCGGTGGTGGCATTGGCGACGAAAGATGAAAAGTTG
ATGTCTTCATTTGTGAAGGAATTGTGGGAGCAGGACATGCCGGAGGGAAA
GGGGCGGTACTACCCTGCCATGCTGTATATGATGAGTTTGTTGCATTGTT
CGGGGAGGTTCCAGGCTTATTTTTAGGGATGACGACGAGGAAGGGAACAT
GGGTAAAAGGCGTGTCGTATATTGCTCTGTCCCTTCTTCCCTTTTGTCGA
AGCGGGGAAAGGGGTGAGGAGGGAGGGGGAGACAGAGGCGGGACCTTCAT
TTTTGGCTTTTAAACGTCACACTTGTTCCCTTACATTGAGGGAATACGTA
GTGATGGATCATGTAGTGCGTGTGTATATCTGTTGATTATGTGACAAAGA
GTGCGTGTGGGTCTGGGTGCGTGCCGCTCCGTAAGAGGAGGCGAGGCAGG
CATATCTGAAAAGAGATACGGTGAGACCGGTGTGGAGAAAATGAATGAGG
AGGCAGGAGGAAGCCGGCAGTACTCTTTGCTTCGCATAGATCAAGTGAAT
CGGAAAAAAGACGACGGGGTGCATTTTTCACTCTCAGGAAAAAGGAGAAT
TACGAAGACAGGTGTAAAAAAGAGCAGTGTTTTTTATATTAGCTCGGGAG
GTGGTTTAGGGGGGACGAGAACACGTCCGCAATAGAAGGGGGTAATGAAC
TAGTATAAGGAAGTGTTTGACGAGGACGGGCATCTATCTGTATTGAATTC
GTATCGTGTACCAGCGCGTGTGTGCGTTTTAGAAGGATACTCCACAACCA
GGGGCAGCGGCAGTTGTGGTAGTAGACGTTGTTGTTGTAGTTGTAGTACT
TGTTGTTATTCTTATTACAGTGGTGGTGGTAGTGATAGTAGTCGAAAAGA
TAAGACAAGCATATATCAAAGCAGTCACACTGAACAGTGTAAGGGGAAGG
GAGGAAGGGAGGGACGGACGGACGGAAGATAGCGTTTACGGCAACGACGA
CGAGATAAGAGCAACCACCAAAAACAGCGGGAACAAAAACGATGTGTGCA
GTAGATGCAGATCATGGAAACGCAAGTATACGAGAGCAAATAAGAAGTTA
GGAAAACGGGACTTTCAGTTAACACACTTTCCCACCGAACCAGATAGACA
TATAGTAGAAATCTGTCCTGGCTTTTGACGTGA
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protein sequence of NO04G02180.1

>NO04G02180.1-protein ID=NO04G02180.1-protein|Name=NO04G02180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=674bp
MGRNLVASATDDIDYPFNTDVRSSPWRVPRENGPAAANAAPNTSAFTENS
FRKHTKGIIPADSIPSTLPATSSVKAAAVMGGRASPGRKSSPSSDLTSTS
SISSISAHGPSSIWSATAAAAIAAASFKGKTSSTNRSVHSPRPPKPLRPH
TPTSNTTDGSLPTANSRLDPRFHSFRRADPLATSSFTDNGGDDDILPFNV
ESGQAGGEDAFGLGGHPGFFSKDSYKILPHRREPPKGWMDNLPPFLNPRK
LTRRQQALCLMLTVAVLLFLIGIVISAARRTGIEALGPGGDDGAAGTGIY
RNLFTEVMDKSIVETDTKLEGVWDNYFKGDIEKTGLYVEVEPNMAQIINT
ESNVVTSEGISYGMITCVHLQKQEAFNRLWNWARFHMQHTAGTYETFFAW
RVTRGGLLIDAKDVVPAPDAEAYIATALIAAHRKWGSSIAYPYKAEAMRL
IHAMGNSKKGFFTKDGKATFNPTDWGLRHSNPSYHLPHFYQAFARFLKNE
GDPRAAKFWSKSAMQSRKFFHVAADPKTGLIPDYTTLEGKGASDPNLEGH
SNFQWDAWRAPANVAVDWAWWNMDGWQQKYADRFLGFFASQGPKYGSQFT
MDGKLADNNSGHDAGLVSMNAVVALATKDEKLMSSFVKELWEQDMPEGKG
RYYPAMLYMMSLLHCSGRFQAYF*
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Synonyms
Publications