NO04G01800, NO04G01800 (gene) Nannochloropsis oceanica

Overview
NameNO04G01800
Unique NameNO04G01800
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1824
Alignment locationchr4:527441..529264 -

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Properties
Property NameValue
DescriptionSecreted salivary gland
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:527441..529264 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006644phospholipid metabolic process
GO:0050482arachidonic acid secretion
GO:0016042lipid catabolic process
GO:0050482arachidonic acid secretion
GO:0016042lipid catabolic process
GO:0006644phospholipid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004623phospholipase A2 activity
GO:0005509calcium ion binding
GO:0005509calcium ion binding
GO:0004623phospholipase A2 activity
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO:0005576extracellular region
Vocabulary: INTERPRO
TermDefinition
IPR036444PLipase_A2_dom_sf
IPR010711PLipase_A2_secretory_G12
Homology
BLAST of NO04G01800 vs. NCBI_GenBank
Match: EWM28555.1 (secreted salivary gland [Nannochloropsis gaditana])

HSP 1 Score: 307.4 bits (786), Expect = 4.900e-80
Identity = 162/299 (54.18%), Postives = 190/299 (63.55%), Query Frame = 0
Query:    1 MHNLFTMV-GRASNWRSSPPSTSIGMNPSPAHVPSSPFAFAGGKCKAAARSLGWRSVYMFVSLLALLGASGGQSRLIEFVCKQLGGSNKCPPIQTCPVGEALFHKPHSKPTYDGCGTHGLKVSLSPTDFSSCCNLHDLCYGQCGRRKKECDDFFEACMLAQCQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKELKRCVRAAKLYYHAVYGLGCFAFRRAKAKHCECRPYXXXXXXXXXXXXXXXXXXKSKTERINDIRGSLVAVMERAARADTPVAGVSHCKWEEFL 299
            MH+L T V  ++S + SS  S S   + + AH   S      GK KAA RSLGWRS+YMFVSLLALLGA+G QS+++EF+CKQLGGSNKCP + TCP GEAL HKPHSKP+YDGCGTHG+KVSLSPTDFSSCCNLHDLCYGQCG  KKECD++FE CM+AQC R                                     QSKEL+RCVRAA+LYYH VYG GCFA+R+A+ +HCEC P                   +    R  +  G L A+MERAA+A TP AG  H KWEEFL
Sbjct:    1 MHHLHTSVEAKSSLFSSSRFSESTTSSLNTAH-SFSELGGPAGKHKAAVRSLGWRSIYMFVSLLALLGATGSQSKIVEFICKQLGGSNKCPAMPTCPAGEALRHKPHSKPSYDGCGTHGVKVSLSPTDFSSCCNLHDLCYGQCGSPKKECDEYFEGCMIAQCHR------------------EHHIPSNSSIDSHHHNPKRQSKELRRCVRAARLYYHGVYGFGCFAYRKAQKQHCECGP------IGEGEEGEGIVRERLAGGRGGESLGGLYALMERAAQAMTPTAGAVHWKWEEFL 274          
BLAST of NO04G01800 vs. NCBI_GenBank
Match: XP_015767581.1 (PREDICTED: group XIIA secretory phospholipase A2-like [Acropora digitifera])

HSP 1 Score: 78.2 bits (191), Expect = 4.900e-11
Identity = 44/170 (25.88%), Postives = 73/170 (42.94%), Query Frame = 0
Query:   69 SGGQSRLIEFVCKQLGGSNKCPPIQTCPVGEALFHKPHSKPTYDGCGTHGLKVSLSP-TDFSSCCNLHDLCYGQCGRRKKECDDFFEACMLAQCQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKELKRCVRAAKLYYHAVYGLGCFAFRRAKAKHCEC 238
            SGG + L + + +QL G + C  +  CP G         KP+ +GCG+ G+K+  +  + F+ CC+LHD+CY  C   + +CD+ F++C+  +C                                         ++L  C  +  L Y   Y LGC A++ A+   C C
Sbjct:   26 SGGLADLAK-ILEQLAGGDDC--VFRCPKGYKPLANRSHKPSSNGCGSMGIKIDTTHFSGFTRCCDLHDICYDTCNNDRNQCDEDFKSCLDNEC------------------------------LLTGLGNRLTKEQLDSCQSSVDLMYSGTYALGCMAYKEAQRNACLC 162          
BLAST of NO04G01800 vs. NCBI_GenBank
Match: PAA74353.1 (hypothetical protein BOX15_Mlig032527g5 [Macrostomum lignano])

HSP 1 Score: 75.9 bits (185), Expect = 2.400e-10
Identity = 45/162 (27.78%), Postives = 63/162 (38.89%), Query Frame = 0
Query:   77 EFVCKQLGGSNKCPPIQTCPVGEALFHKPHSKPTYDGCGTHGLKVSLSP-TDFSSCCNLHDLCYGQCGRRKKECDDFFEACMLAQCQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKELKRCVRAAKLYYHAVYGLGCFAFRRAKAKHCEC 238
            E V + L   +    +  CP G     KP+ K   +GCG+HG K  +S     + CCN HD+CYG CGR +  CD  F ACM   C++                                       + L  C   A  ++  V  +GC  +R A+A  C C
Sbjct:   77 ENVLESLSAPDNGNCVYKCPNGATPKAKPNHKVVPNGCGSHGFKPDVSAFPGLTDCCNKHDICYGTCGRGQAVCDRSFNACMADSCEQ-----------------------------MRKSGAIKSDEALTECRATAAAFHLTVVSVGCQFYREAQASACVC 209          
BLAST of NO04G01800 vs. NCBI_GenBank
Match: PAA75043.1 (hypothetical protein BOX15_Mlig032527g3, partial [Macrostomum lignano])

HSP 1 Score: 75.9 bits (185), Expect = 2.400e-10
Identity = 45/162 (27.78%), Postives = 63/162 (38.89%), Query Frame = 0
Query:   77 EFVCKQLGGSNKCPPIQTCPVGEALFHKPHSKPTYDGCGTHGLKVSLSP-TDFSSCCNLHDLCYGQCGRRKKECDDFFEACMLAQCQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKELKRCVRAAKLYYHAVYGLGCFAFRRAKAKHCEC 238
            E V + L   +    +  CP G     KP+ K   +GCG+HG K  +S     + CCN HD+CYG CGR +  CD  F ACM   C++                                       + L  C   A  ++  V  +GC  +R A+A  C C
Sbjct:   78 ENVLESLAAPDNGNCVYKCPNGATPKAKPNHKVVPNGCGSHGFKPDVSAFPGLTDCCNKHDICYGTCGRGQAVCDRSFNACMADSCEQ-----------------------------MRKSGAIKSDEALTECRATAAAFHLTVVSVGCQFYREAQASACVC 210          
BLAST of NO04G01800 vs. NCBI_GenBank
Match: PAA76292.1 (hypothetical protein BOX15_Mlig032527g2, partial [Macrostomum lignano])

HSP 1 Score: 75.9 bits (185), Expect = 2.400e-10
Identity = 45/162 (27.78%), Postives = 63/162 (38.89%), Query Frame = 0
Query:   77 EFVCKQLGGSNKCPPIQTCPVGEALFHKPHSKPTYDGCGTHGLKVSLSP-TDFSSCCNLHDLCYGQCGRRKKECDDFFEACMLAQCQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKELKRCVRAAKLYYHAVYGLGCFAFRRAKAKHCEC 238
            E V + L   +    +  CP G     KP+ K   +GCG+HG K  +S     + CCN HD+CYG CGR +  CD  F ACM   C++                                       + L  C   A  ++  V  +GC  +R A+A  C C
Sbjct:   78 ENVLESLAAPDNGNCVYKCPNGATPKAKPNHKVVPNGCGSHGFKPDVSAFPGLTDCCNKHDICYGTCGRGQAVCDRSFNACMADSCEQ-----------------------------MRKSGAIKSDEALTECRATAAAFHLTVVSVGCQFYREAQASACVC 210          
BLAST of NO04G01800 vs. NCBI_GenBank
Match: XP_020916811.1 (group XIIA secretory phospholipase A2-like [Exaiptasia pallida] >KXJ21449.1 Group XIIA secretory phospholipase A2 [Exaiptasia pallida])

HSP 1 Score: 73.6 bits (179), Expect = 1.200e-9
Identity = 45/184 (24.46%), Postives = 77/184 (41.85%), Query Frame = 0
Query:   56 VYMFVSLL-ALLGASGGQSRLIEFVCKQLGGSNKCPPIQTCPVGEALFHKPHSKPTYDGCGTHGLKVSLSP-TDFSSCCNLHDLCYGQCGRRKKECDDFFEACMLAQCQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKELKRCVRAAKLYYHAVYGLGCFAFRRAKAKHCEC 238
            +Y+ + L+ +    +GG   L + +  +L G ++C     CP G         +P+ +GCG+ G+K+  S    F+ CCN+HD CY  C   K +CD+ F++C+   C                                       +  ELK C  ++ L+Y     LGC A++ ++   C C
Sbjct:   13 LYLIIELVYSSXNPAGGLGNLAK-ILAELSGGSQC--YFRCPKGYKPLANASHRPSSNGCGSMGIKIDTSNLPGFTECCNIHDKCYDTCNNDKIQCDEDFKSCLDNVC------------------------------LLEGLGKKMKKDELKACESSSDLFYSGTMALGCSAYKESQRNACLC 163          
BLAST of NO04G01800 vs. NCBI_GenBank
Match: XP_013386303.1 (group XIIA secretory phospholipase A2 [Lingula anatina])

HSP 1 Score: 72.4 bits (176), Expect = 2.700e-9
Identity = 40/147 (27.21%), Postives = 60/147 (40.82%), Query Frame = 0
Query:   94 TCPVGEALFHKPHSKPTYDGCGTHGLKVSLSP-TDFSSCCNLHDLCYGQCGRRKKECDDFFEACMLAQCQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKELKRCVRAAKLYYHAVYGLGCFAFRRAKAKHCECRP 240
            TCP G+     PH K ++DGCG+ G+KV        +SCCN HD+CY  C + ++ CD  FE+C+   C+                                      +    + C    +L       +GC ++R A+AK C C P
Sbjct:   58 TCPRGQKQIPNPHHKVSFDGCGSLGIKVDTDHLPGVTSCCNNHDMCYDTCNKDREGCDRAFESCLADICK----------------------------------LFKREKMAFEGCKVTTQLLAAGASSMGCRSYRNAQAKACLCVP 170          
BLAST of NO04G01800 vs. NCBI_GenBank
Match: XP_013794546.1 (group XIIA secretory phospholipase A2-like [Limulus polyphemus])

HSP 1 Score: 72.4 bits (176), Expect = 2.700e-9
Identity = 46/149 (30.87%), Postives = 61/149 (40.94%), Query Frame = 0
Query:   92 IQTCPVGEALFHKPHSKPTYDGCGTHGLKV---SLSPTDFSSCCNLHDLCYGQCGRRKKECDDFFEACMLAQCQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKELKRCVRAAKLYYHAVYGLGCFAFRRAKAKHCEC 238
            I +CP G+      +     +GCG++G ++   SLS  D   CCN HD+CYG C   K  CD  F+ C+   C R                                     Q   LK C  AAKL+Y A  GLGC A+  ++ K C C
Sbjct:   74 IFSCPRGQQAIRNSYFSTYPNGCGSYGFQLKDKSLSLKDMELCCNDHDVCYGTCLADKDLCDLKFKKCLYNTCDR--------------------------------HKKFLQEGGLKGCKGAAKLFYLATVGLGCKAYLDSQKKACIC 190          
BLAST of NO04G01800 vs. NCBI_GenBank
Match: ODM88307.1 (Group XIIB secretory phospholipase A2-like protein [Orchesella cincta])

HSP 1 Score: 71.2 bits (173), Expect = 6.000e-9
Identity = 41/150 (27.33%), Postives = 58/150 (38.67%), Query Frame = 0
Query:   95 CPVGEALFHKPHSKPTYDGCGTHGLKVSLSP-----TDFSSCCNLHDLCYGQCGRRKKECDDFFEACMLAQCQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKELKRCVRAAKLYYHAVYGLGCFAFRRAKAKHCECRP 240
            CP G+    +P  KP  +GCG +GL+  L+P     T F  CC+ HD+CY  CG  K ECD  F+ C+  +C                                       +   +  C   AKL Y     +GC  +  A+   C C+P
Sbjct:   88 CPPGQIAKSRPGHKPVTNGCGAYGLEQFLTPEMLPVTGFVECCDQHDICYETCGEDKDECDLKFKKCLYKKC---------------------------AVLKNADSAAIQKKISVVGCKAGAKLLYTGTTAVGCKPYLNAQQNACFCKP 210          
BLAST of NO04G01800 vs. NCBI_GenBank
Match: EFX86064.1 (phospholipase-like protein A2, group [Daphnia pulex])

HSP 1 Score: 70.5 bits (171), Expect = 1.000e-8
Identity = 43/149 (28.86%), Postives = 58/149 (38.93%), Query Frame = 0
Query:   92 IQTCPVGEALFHKPHSKPTYDGCGTHGL--KVSLSPTD-FSSCCNLHDLCYGQCGRRKKECDDFFEACMLAQCQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSKELKRCVRAAKLYYHAVYGLGCFAFRRAKAKHCEC 238
            ++ CP G      P+     +GCG+ G   K  L P +    CCN+HD CY +CG  K  CD  F+ C+ + C+                                         ELK C  AAKL Y A    GC A++ A+ K C C
Sbjct:   55 VEECPAGRVRQSNPYFISESNGCGSFGYQWKKDLLPDEGLEDCCNVHDHCYDECGADKDICDLEFKTCLYSVCKSRKHEWTV--------------------------------NELKACKGAAKLMYTATQAFGCKAYQNAQKKACRC 171          
The following BLAST results are available for this feature:
BLAST of NO04G01800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28555.14.900e-8054.18secreted salivary gland [Nannochloropsis gaditana][more]
XP_015767581.14.900e-1125.88PREDICTED: group XIIA secretory phospholipase A2-l... [more]
PAA74353.12.400e-1027.78hypothetical protein BOX15_Mlig032527g5 [Macrostom... [more]
PAA75043.12.400e-1027.78hypothetical protein BOX15_Mlig032527g3, partial [... [more]
PAA76292.12.400e-1027.78hypothetical protein BOX15_Mlig032527g2, partial [... [more]
XP_020916811.11.200e-924.46group XIIA secretory phospholipase A2-like [Exaipt... [more]
XP_013386303.12.700e-927.21group XIIA secretory phospholipase A2 [Lingula ana... [more]
XP_013794546.12.700e-930.87group XIIA secretory phospholipase A2-like [Limulu... [more]
ODM88307.16.000e-927.33Group XIIB secretory phospholipase A2-like protein... [more]
EFX86064.11.000e-828.86phospholipase-like protein A2, group [Daphnia pule... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL079nonsL079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR109ngnoR109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009630NSK009630Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G01800.1NO04G01800.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668715gene_1967Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100009g65gene2004Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G01800.1NO04G01800.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G01800 ID=NO04G01800|Name=NO04G01800|organism=Nannochloropsis oceanica|type=gene|length=1824bp
CACAGGCACTTCAGGGCAAAAAAATTATGCATAATCTCTTCACCATGGTC
GGCCGGGCCAGCAACTGGCGCTCGTCTCCGCCCAGCACCTCTATTGGTAT
GAACCCCTCTCCCGCCCATGTCCCCTCCAGCCCGTTTGCATTTGCTGGGG
GCAAGTGCAAGGCGGCTGCACGATCCCTCGGATGGCGCAGCGTGTACATG
TTTGTCTCGCTACTGGCGTTATTGGGGGCGTCGGGGGGTCAGAGCCGATT
GATCGAATTCGTTTGCAAGCAATTGGGTGGCAGCAACAAATGTCCGCCCA
TCCAAACCTGCCCAGTGGGGGAAGCCCTCTTCCACAAGCCACACTCCAAG
gtatacatcagcaaatgaatgtctcggcaaagtagaaaaacgaaggggtt
gtgatgaatcgcaaggagaggagaattgggcactatttgcttctgtgtcc
caacgcattgccccctcctcctcctcctcctcctccacttccaccccctc
ctttattcttgagattcacgcttaaatcattctccctctacctctacctt
ctggttccccaattacagCCCACCTACGATGGGTGCGGAACGCACGGCCT
GAAAGTCAGCTTGAGCCCTACGGACTTCTCCTCTTGCTGTAATCTGCATG
ATTTGTGCTACGGTCAATGCGGGCGCCGGAAGAAAGAGTGTGATGATTTT
TTTGAGGCTTGTATGTTGGCACAGTGTCAGCGTGAACATCATGTCAATAG
TAGTAGCAGCAGCAGTAGCAGTAGTAGCAGCAGCCACCACTCGCATTCCC
TTCAAATACAGGGAGGAGGACACAGGCAGCAGCAGCCAATGCCTCAATCG
AAGGAACTGAAGCGATGCGTGCGGGCCGCTAAACTATACTATCACGCTGT
GTATGGACTTGGTTGCTTCGCATTTCGTCGAGCCAAAGCGAAACACTGCG
AGTGCCGGCCTTATCAGAAGGGGGATAAGGACAAGGAGAAGGAGGAGGAG
GGCGGTGAGGGTGGTAAGAAGAGCAAAACGGAGAGGATTAATGACATAAG
GGGGAGCCTCGTGGCGGTGATGGAAAGAGCGGCTCGGGCCGACACGCCAG
TGGCTGGGGTTAGTCATTGCAAATGGGAAGAATTCCTTTGAAACGCACTT
GCGCTGTTTCCGGGCGGTGGTAGCAAGAGGAAAGAGGAAAAATAGTTAGA
TAGAAAGGAAGGCGAACCCAAGCCGACGCTTCTGAGAGTTGTTCTGGAGG
GAAAGAGGCCGAAGGTTAGGCATTCCACGTAACGAGGAAATTTTTGCATG
CAGAAAGAGGATTTTGTGGTTTGAAATAAACCAAACGGGGGACTTGTCCC
GGAAAGTATGAGTACATGTCAGAGGAATGGCGAAATGGACCAGGGGGTGA
AGAGACAGGACGATGTGGTCTTTGGTCATTTGGAGATGTATTGTATCACG
CAGTAGAGGATATTTCTCCTAAAGGTCTGGAAATTTGCGAATTTAAGGAA
GGATGTATCTCTCAAGTATTTAATGATTGTTTTATAAGAGAGAGAGTGGT
TGTTTTGGTAAAAGGTTTGAAAGAGGCAGGAGGGGGAGGATGGGGAATGG
ATGAAATGAAATGGAGAAAACTGTGTACATGTGTGTGTAATATATACAAG
GGCACATTCGGGTGCTTGATGTGTGTGTAGTGTGTGAGTATGTGTGTTGG
TTCCGTATCTTTCTTCGAGTGAGAGGGGGGGGGGAAGAAACGGACTGATT
GAAGAAAACGAATGAACGGAAAGCGACCGAAAATAAAAAAAAAACACGGG
CTTTTGAATGAGAAAGAGAAATCA
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protein sequence of NO04G01800.1

>NO04G01800.1-protein ID=NO04G01800.1-protein|Name=NO04G01800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=299bp
MHNLFTMVGRASNWRSSPPSTSIGMNPSPAHVPSSPFAFAGGKCKAAARS
LGWRSVYMFVSLLALLGASGGQSRLIEFVCKQLGGSNKCPPIQTCPVGEA
LFHKPHSKPTYDGCGTHGLKVSLSPTDFSSCCNLHDLCYGQCGRRKKECD
DFFEACMLAQCQREHHVNSSSSSSSSSSSSHHSHSLQIQGGGHRQQQPMP
QSKELKRCVRAAKLYYHAVYGLGCFAFRRAKAKHCECRPYQKGDKDKEKE
EEGGEGGKKSKTERINDIRGSLVAVMERAARADTPVAGVSHCKWEEFL*
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Synonyms
Publications