NO04G01640, NO04G01640 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G01640 vs. NCBI_GenBank
Match: XP_008896944.1 (hypothetical protein PPTG_05191 [Phytophthora parasitica INRA-310] >ETN17377.1 hypothetical protein PPTG_05191 [Phytophthora parasitica INRA-310] >ETP32458.1 hypothetical protein F442_18859 [Phytophthora parasitica P10297]) HSP 1 Score: 79.3 bits (194), Expect = 6.700e-11 Identity = 70/252 (27.78%), Postives = 104/252 (41.27%), Query Frame = 0 Query: 45 GEDYTQDGLAFWKEAFGRG----RLVAWPRFVEAVGEMMRTTYPGELQGFVELEDVLRYLIDRSEGNRARNLIALEEWAVFLHRFGPLECCIGKAARSFFVVTEGGTEGWGEMVPWFHGNITRQKAKEIVLGGGAGKRPGSFLVRFSATNPRNFTLTYLDEGELKHXXXXXXXXXXXXXISPLPATYKNVLLHNRGPLGFALD--------ASAPEEECFPTVRELVDCKHG---------WSLPCSSELAA 276 G D GL +W E + R V +P + A P EL EL V ++ S R + + E++ F+ RFGPLE + K F +E E+VPWFHG I R +A+ ++ + G+FLVRFS ++P FTLTYL +P KN L+ N G G+AL ++ + +P++ + G +S C+ ELAA Sbjct: 2 GSDIEALGLLWWDEQLTQSTVPFRDVFFPALLCACDPQ---PLPSELSR-DELRVVTQFCF--SPNARQSDQVTREDFRRFIARFGPLELSLSKLVACF-------SEN-HELVPWFHGEIGRVEAESVL--SSRERSDGAFLVRFSESHPTKFTLTYL-------------KIHSPSSNTPGRRELKNCLVSNLGAAGYALTEAVRRGGATASVRQRTYPSIGAFIQSSSGRLKYGVASEFSAKCNQELAA 224
BLAST of NO04G01640 vs. NCBI_GenBank
Match: ETP04321.1 (hypothetical protein F441_18886 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 79.3 bits (194), Expect = 6.700e-11 Identity = 70/252 (27.78%), Postives = 104/252 (41.27%), Query Frame = 0 Query: 45 GEDYTQDGLAFWKEAFGRG----RLVAWPRFVEAVGEMMRTTYPGELQGFVELEDVLRYLIDRSEGNRARNLIALEEWAVFLHRFGPLECCIGKAARSFFVVTEGGTEGWGEMVPWFHGNITRQKAKEIVLGGGAGKRPGSFLVRFSATNPRNFTLTYLDEGELKHXXXXXXXXXXXXXISPLPATYKNVLLHNRGPLGFALD--------ASAPEEECFPTVRELVDCKHG---------WSLPCSSELAA 276 G D GL +W E + R V +P + A P EL EL V ++ S R + + E++ F+ RFGPLE + K F +E E+VPWFHG I R +A+ ++ + G+FLVRFS ++P FTLTYL +P KN L+ N G G+AL ++ + +P++ + G +S C+ ELAA Sbjct: 2 GSDIEALGLLWWDEQLTQSTVPFRDVFFPALLCACDPQ---PLPSELSR-DELRVVTQFCF--SPNARQSDQVTREDFRRFIARFGPLELSLSKLVACF-------SEN-HELVPWFHGEIGRVEAESVL--SSRERSDGAFLVRFSESHPTKFTLTYL-------------KIHSPSSNTPGRRELKNCLVSNLGAAGYALTEAVRRGGATASVRQRTYPSIGAFIQSSSGRLKYGVASEFSAKCNQELAA 224
BLAST of NO04G01640 vs. NCBI_GenBank
Match: OQS00474.1 (hypothetical protein ACHHYP_03551 [Achlya hypogyna]) HSP 1 Score: 79.0 bits (193), Expect = 8.700e-11 Identity = 48/149 (32.21%), Postives = 74/149 (49.66%), Query Frame = 0 Query: 51 DGLAFWKEAFGRGRLVAWPRFVEAVGEMMRTTYPGELQGFVELEDVLRYLIDRSEGNRARNLIALEEWAVFLHRFGPLECCIGKAARSFFVVTEGGTEGWGEMVPWFHGNITRQKAKEIVLGGGAGKRPGSFLVRFSATNPRNFTLTYL 200 DG+A+W+ A G V + + + E + + P + E++ LR ++ +++ +WA FL RFGP C+ K+ F G + PWFHG ++R +A+ I+ GG GSFLVRFS T P FTL Y+ Sbjct: 4 DGVAWWRTAIGAAE-VPLEQLLGRLLECVDVSLPSAMTP-AEMKIYLRVCLE------LHPVVSASDWARFLVRFGPFRSCVVKSVACFQSRYHEG------LAPWFHGVLSRAEAEAILRGGD----DGSFLVRFSETQPEKFTLAYV 134
BLAST of NO04G01640 vs. NCBI_GenBank
Match: OQS06761.1 (hypothetical protein THRCLA_01196 [Thraustotheca clavata]) HSP 1 Score: 75.9 bits (185), Expect = 7.400e-10 Identity = 38/90 (42.22%), Postives = 53/90 (58.89%), Query Frame = 0 Query: 110 RNLIALEEWAVFLHRFGPLECCIGKAARSFFVVTEGGTEGWGEMVPWFHGNITRQKAKEIVLGGGAGKRPGSFLVRFSATNPRNFTLTYL 200 ++ ++LE+W FL RFGPL CI K+ F + G +VPWF+G ITR +A+ I+ G G+FLVRFS T P+ F L Y+ Sbjct: 17 KSFVSLEDWKNFLQRFGPLRSCINKSVVCFRNRSNDG------IVPWFYGAITRAEAESILRDGD----DGTFLVRFSETQPQKFVLVYV 96
BLAST of NO04G01640 vs. NCBI_GenBank
Match: ETO63214.1 (hypothetical protein, variant [Phytophthora parasitica P1976]) HSP 1 Score: 73.6 bits (179), Expect = 3.700e-9 Identity = 52/180 (28.89%), Postives = 79/180 (43.89%), Query Frame = 0 Query: 113 IALEEWAVFLHRFGPLECCIGKAARSFFVVTEGGTEGWGEMVPWFHGNITRQKAKEIVLGGGAGKRPGSFLVRFSATNPRNFTLTYLDEGELKHXXXXXXXXXXXXXISPLPATYKNVLLHNRGPLGFALD--------ASAPEEECFPTVRELVDCKHG---------WSLPCSSELAA 276 + L ++ F+ RFGPLE + K F +E E+VPWFHG I R +A+ ++ + G+FLVRFS ++P FTLTYL +P KN L+ N G G+AL ++ + +P++ + G +S C+ ELAA Sbjct: 5 LLLLQFRRFIARFGPLELSLSKLVACF-------SEN-HELVPWFHGEIGRVEAESVL--SSRERSDGAFLVRFSESHPTKFTLTYL-------------KIHSPSSSTPGRRELKNCLVSNLGAAGYALTEAVRRGGATASVRQRTYPSIGAFIQSSSGRLKYGVASEFSAKCNQELAA 161
BLAST of NO04G01640 vs. NCBI_GenBank
Match: ETI34423.1 (hypothetical protein, variant [Phytophthora parasitica P1569] >ETK74772.1 hypothetical protein, variant [Phytophthora parasitica] >ETL81457.1 hypothetical protein, variant [Phytophthora parasitica] >ETM34652.1 hypothetical protein, variant [Phytophthora parasitica]) HSP 1 Score: 73.2 bits (178), Expect = 4.800e-9 Identity = 52/180 (28.89%), Postives = 79/180 (43.89%), Query Frame = 0 Query: 113 IALEEWAVFLHRFGPLECCIGKAARSFFVVTEGGTEGWGEMVPWFHGNITRQKAKEIVLGGGAGKRPGSFLVRFSATNPRNFTLTYLDEGELKHXXXXXXXXXXXXXISPLPATYKNVLLHNRGPLGFALD--------ASAPEEECFPTVRELVDCKHG---------WSLPCSSELAA 276 + L ++ F+ RFGPLE + K F +E E+VPWFHG I R +A+ ++ + G+FLVRFS ++P FTLTYL +P KN L+ N G G+AL ++ + +P++ + G +S C+ ELAA Sbjct: 5 LLLLQFRRFIARFGPLELSLSKLVACF-------SEN-RELVPWFHGEIGRVEAESVL--SSRERSDGAFLVRFSESHPTKFTLTYL-------------KIHSPSSNTPGRRELKNCLVSNLGAAGYALTEAVRRGGATASVRQRTYPSIGAFIQSSSGRLKYGVASEFSAKCNQELAA 161
BLAST of NO04G01640 vs. NCBI_GenBank
Match: ETL28199.1 (hypothetical protein, variant [Phytophthora parasitica]) HSP 1 Score: 73.2 bits (178), Expect = 4.800e-9 Identity = 52/180 (28.89%), Postives = 79/180 (43.89%), Query Frame = 0 Query: 113 IALEEWAVFLHRFGPLECCIGKAARSFFVVTEGGTEGWGEMVPWFHGNITRQKAKEIVLGGGAGKRPGSFLVRFSATNPRNFTLTYLDEGELKHXXXXXXXXXXXXXISPLPATYKNVLLHNRGPLGFALD--------ASAPEEECFPTVRELVDCKHG---------WSLPCSSELAA 276 + L ++ F+ RFGPLE + K F +E E+VPWFHG I R +A+ ++ + G+FLVRFS ++P FTLTYL +P KN L+ N G G+AL ++ + +P++ + G +S C+ ELAA Sbjct: 5 LLLLQFRRFIARFGPLELSLSKLVACF-------SEN-HELVPWFHGEIGRVEAESVL--SSRERSDGAFLVRFSESHPTKFTLTYL-------------KIHSPSSNTPGRRELKNCLVSNLGAAGYALTEAVRRGGATASVRQRTYPSIGAFIQSSSGRLKYGVASEFSAKCNQELAA 161
BLAST of NO04G01640 vs. NCBI_GenBank
Match: XP_008896945.1 (hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETN17378.1 hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETP32459.1 hypothetical protein, variant [Phytophthora parasitica P10297]) HSP 1 Score: 73.2 bits (178), Expect = 4.800e-9 Identity = 52/180 (28.89%), Postives = 79/180 (43.89%), Query Frame = 0 Query: 113 IALEEWAVFLHRFGPLECCIGKAARSFFVVTEGGTEGWGEMVPWFHGNITRQKAKEIVLGGGAGKRPGSFLVRFSATNPRNFTLTYLDEGELKHXXXXXXXXXXXXXISPLPATYKNVLLHNRGPLGFALD--------ASAPEEECFPTVRELVDCKHG---------WSLPCSSELAA 276 + L ++ F+ RFGPLE + K F +E E+VPWFHG I R +A+ ++ + G+FLVRFS ++P FTLTYL +P KN L+ N G G+AL ++ + +P++ + G +S C+ ELAA Sbjct: 5 LLLLQFRRFIARFGPLELSLSKLVACF-------SEN-HELVPWFHGEIGRVEAESVL--SSRERSDGAFLVRFSESHPTKFTLTYL-------------KIHSPSSNTPGRRELKNCLVSNLGAAGYALTEAVRRGGATASVRQRTYPSIGAFIQSSSGRLKYGVASEFSAKCNQELAA 161
BLAST of NO04G01640 vs. NCBI_GenBank
Match: ETP04322.1 (hypothetical protein, variant [Phytophthora parasitica CJ01A1]) HSP 1 Score: 73.2 bits (178), Expect = 4.800e-9 Identity = 52/180 (28.89%), Postives = 79/180 (43.89%), Query Frame = 0 Query: 113 IALEEWAVFLHRFGPLECCIGKAARSFFVVTEGGTEGWGEMVPWFHGNITRQKAKEIVLGGGAGKRPGSFLVRFSATNPRNFTLTYLDEGELKHXXXXXXXXXXXXXISPLPATYKNVLLHNRGPLGFALD--------ASAPEEECFPTVRELVDCKHG---------WSLPCSSELAA 276 + L ++ F+ RFGPLE + K F +E E+VPWFHG I R +A+ ++ + G+FLVRFS ++P FTLTYL +P KN L+ N G G+AL ++ + +P++ + G +S C+ ELAA Sbjct: 5 LLLLQFRRFIARFGPLELSLSKLVACF-------SEN-HELVPWFHGEIGRVEAESVL--SSRERSDGAFLVRFSESHPTKFTLTYL-------------KIHSPSSNTPGRRELKNCLVSNLGAAGYALTEAVRRGGATASVRQRTYPSIGAFIQSSSGRLKYGVASEFSAKCNQELAA 161
BLAST of NO04G01640 vs. NCBI_GenBank
Match: XP_002907389.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY63953.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 73.2 bits (178), Expect = 4.800e-9 Identity = 51/172 (29.65%), Postives = 77/172 (44.77%), Query Frame = 0 Query: 121 FLHRFGPLECCIGKAARSFFVVTEGGTEGWGEMVPWFHGNITRQKAKEIVLGGGAGKRPGSFLVRFSATNPRNFTLTYLDEGELKHXXXXXXXXXXXXXISPLPATYKNVLLHNRGPLGFALD--------ASAPEEECFPTVRELVD-----CKHG----WSLPCSSELAA 276 F+ RFGPLE + K F + E+VPWFHG I R +A+ ++ + G+FLVRFS ++P FTLTYL +P KN L++N G G+AL ++ + +P++ + K+G +S C+ ELAA Sbjct: 736 FIARFGPLEFSLSKLVACFCINR--------ELVPWFHGEIGRDEAESVL--STRERSDGAFLVRFSESHPTKFTLTYLKIHSASSN-------------TPGRRELKNCLVNNLGATGYALTEAVRRGGARASVRQRTYPSIGAFIQSSSARLKYGVASEFSSKCNQELAA 884 The following BLAST results are available for this feature:
BLAST of NO04G01640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G01640 ID=NO04G01640|Name=NO04G01640|organism=Nannochloropsis oceanica|type=gene|length=2730bpback to top protein sequence of NO04G01640.1 >NO04G01640.1-protein ID=NO04G01640.1-protein|Name=NO04G01640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=910bpback to top Synonyms
Publications
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