NO04G01430, NO04G01430 (gene) Nannochloropsis oceanica

Overview
NameNO04G01430
Unique NameNO04G01430
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3219
Alignment locationchr4:446597..449815 +

Link to JBrowse

Properties
Property NameValue
DescriptionPpgpp synthetase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:446597..449815 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0015969guanosine tetraphosphate metabolic process
GO:0015969guanosine tetraphosphate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO:0005509calcium ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair
IPR003607HD/PDEase_dom
IPR007685RelA_SpoT
IPR002048EF_hand_dom
Homology
BLAST of NO04G01430 vs. NCBI_GenBank
Match: EWM28606.1 (ppgpp synthetase [Nannochloropsis gaditana])

HSP 1 Score: 797.7 bits (2059), Expect = 3.500e-227
Identity = 447/702 (63.68%), Postives = 508/702 (72.36%), Query Frame = 0
Query:  117 RDDDTSTPTLTAVTIELTDWVSEGEELWQNAPSMRRNKGNVKEPLPNSKTTKGAAQVRARETASSSLSDSITALGFMDSERDDSKEVEHEQ-EQQLPVKLQREVNLVWYEIQQGGRMAYLPPEERARLKQQLVVLAFFRTLFEHPGQVLNTQSAEDCFQQADVNRDGQLSFEEFLRWYTASHDKGXXXXXXXXXXXXXXXXXXXXXKSTGLVPFGQGAAAKSLEGVAMKDLLRQFLVEKKQQRQGQQQLHFYEQDKAKSEEEVLDNLDRVIETTQLLLELEADADTVLAALATYFLGLDDNATAGGGAESARDRTEKLAVVNSQCGPIVHQIVQDSARLGGLFQAPPEVTQFRRNPKEYQAMLDLDHHNAQLIREYLMAANSDARAFVVHMAGLVYALRNQYRLPVHARHLLALESLQLYVPVASALGLGPRLKEMEELSYRALFPESYERFASWHKNFADMGQVALLVARKQIASHIEADIHGLRQYLKGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVVLTPALGSTGATTAGGLMLRRTRSSGRNSLPARSMATTAVF-------VGEEGEEXXXXXRGHLMXXXXXXXXXXXXXXXXXXXSLDFDAWLCHQVHKIVTSLWEEVPGRYKNYVDNPKPNGYRSLHTGVYLMDGGGTAEIQIRTADMHMEAEEGVASHALYKAELQTTDQVEQFQ 811
            RDD+ +T     +TIELTDWVSEGEELWQ A S  R+     E     K+  G   +      S+ L    T LGF  +  DD   + H Q   QLPV+LQREVNLVWYEIQ+G RMAYL  EER R+KQQLVVLAFFRTLF+HP QVLNTQSAE CFQQADVNRDGQLSFEEFLRWYTAS+D                        +  LVPFGQGAAA+ LEG++M ++LR FL +K+   +        E D  KSEE+VL +LDRVIETTQ+LLELEAD +TVLAALATYFLGLD        AE + D TEKLAVV SQCGP+VHQIV+DS RLGGLFQA PE  Q+RRNP+EY  MLDLDH NAQL+R++L+  NSDARAFVVHMAGL++ALRNQYR+PVHARH+LALESLQLYVPVASALGLG RLKEMEELSYRALFPESYE FASWHKNFAD+GQVAL++A+K+IA+ IEAD+ GLR++L+GYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRV+L P+LG    T   G  LR   +  +N+LPA S ATT           GE G        G                       L+ +AWLCHQVH +V SLWEEVPGRYKNYVD PKPNGYRSLHTGVYLM+GGGTAEIQIRTA MH EAE+G+ASHALYKAELQT DQVE FQ
Sbjct:  122 RDDEDATELQKQITIELTDWVSEGEELWQEAFSTPRD-----EKRHRGKSEPGDNGMGHSTRPSNGL--FTTVLGFRSAAHDD---LSHGQAAHQLPVRLQREVNLVWYEIQRGDRMAYLRAEERDRVKQQLVVLAFFRTLFDHPSQVLNTQSAEACFQQADVNRDGQLSFEEFLRWYTASYD-DQGPKSPEGRDSSEEEGGSTEETAGALVPFGQGAAARRLEGLSMTEVLRTFLAQKEHVSEAGP-----EADN-KSEEQVLADLDRVIETTQVLLELEADVETVLAALATYFLGLD--------AEDSEDLTEKLAVVRSQCGPVVHQIVRDSTRLGGLFQASPETRQYRRNPREYYTMLDLDHRNAQLVRQHLVNENSDARAFVVHMAGLLHALRNQYRMPVHARHVLALESLQLYVPVASALGLGSRLKEMEELSYRALFPESYESFASWHKNFADLGQVALVIAKKKIAARIEADVQGLRRFLEGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVILFPSLG----TGPRGRFLRGQLARKKNALPAWSTATTVALGDGASEGYGERGNVGGRNSDGTQRALGPAGATPVFSSPLPSASRLELEAWLCHQVHAVVASLWEEVPGRYKNYVDAPKPNGYRSLHTGVYLMEGGGTAEIQIRTAGMHAEAEDGIASHALYKAELQTRDQVEDFQ 794          
BLAST of NO04G01430 vs. NCBI_GenBank
Match: CBJ27227.1 (GTP diphosphokinase [Ectocarpus siliculosus])

HSP 1 Score: 213.0 bits (541), Expect = 3.700e-51
Identity = 195/756 (25.79%), Postives = 307/756 (40.61%), Query Frame = 0
Query:  212 PVKLQREVNLVWYEIQQGGRMAYLPPEERARLKQQLVVLAFFRTLFEHPGQVLNTQSAEDCFQQADVNRDGQLSFEEFLRWYTAS-----------HDKGXXXXXXXXXXXXXXXXXXXXXKSTGLVPFGQGAAAKSLEGVAM--KDLLRQFLVEKKQQ---------------------------------------------------RQGQQQLHFYEQDKAKSEEEVLD-----NLDRVIETTQLLLELEADADTVLAALATYFLGLDDNATAGGGAESARDRTEKLAVVNSQCGPIVHQIVQDSARLGGLFQAPPEV-----------------------------------------------------------------------------------TQFRRNPKE---YQAMLDLDHHNAQLIREYLMAANSDARAFVVHMAGLVYALRNQYRLPVHARHLLALESLQLYVPVASALGLGPRLKEMEELSYRALFPESYERFASWHKNFADMGQ--VALLVARKQIASHIEADIHGLRQYLKGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVVLTPALGSTGATTAGGLMLRRTRSSGRNSLPARSMATTAVFVGEEGEEXXXXXRGHLMXXXXXXXXXXXXXXXXXXXSLDFDAWLCHQVHKIVTSLWEEVPGRYKNYVDNPKPNGYRSLHTGVYLMDGGGTAEIQIRTADMHMEAEEGVASHALYKAELQTTDQVEQFQ 811
            P + Q+ +  +W  + +G ++ YL  E +A++KQ L VLA +  L EHP Q    ++ +  F + D N DG++SF+EF+RWY+ S                                    +S  L+  G        + +A+  + L      +K  +                                                   R+        E     S  + +D     +L++ +E  ++L+   AD DT++AALA+  +             +   R   L V+  Q GPI+  IV+D   L  L Q                                                                                        + F  +P +    + +LDLD H+A+L+R+YL+ ++ DARA VVHMA L   LR+  + P H RH LALE+LQLYVPV++ALGLG   +E+EEL Y+ +FP++Y   A WH +        V  +  R   A H   DI  +R  +  Y + GR K++      V+R++K  +++HD++G R+++ P    T A++A G   R   ++G N+      A      G++           +                      D D+ L H V++++  L+EEVPGR+KNYVD PK NGYRS+HT V +   G   E Q+RTA MH+ AE G ASH+LYK +L   ++   F+
Sbjct:  125 PFRFQQLIQQMWATLSRGNQLEYLGKEGKAKVKQALSVLAAYSALREHPLQT-GVENPQQAFSEMDFNSDGEVSFDEFVRWYSMSTALDEKPQQLPEQANVGPASARSGNGGVTAPEVALTRSKTLLSTGSRLLVDVEQSLALTSRQLTNMPAADKSPRSAAAPPTDGGPNHNVGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARERWLSGAAAEPGAVGSGTDPVDDSAAKDLEKALEMLRVLVRAHADVDTLVAALASCII------------RNPMGR-YNLEVIEEQFGPIIRGIVEDRLLLERLPQPTSAASYLSIQQVTCDCKGAGFLWRLVENCRVPLSSLIRWRVGAHHPMMAWRIYLHVVNPLFCCSTAVDMYLYVRVSHRMHGRRARAGSAFTCSPPQSFGVKPVLDLDDHHAKLMRDYLVHSSRDARAVVVHMADLTCRLRDPSKTPAHTRHTLALEALQLYVPVSNALGLGSSFRELEELGYKTIFPQTYSNMALWHHDVMGKSHDIVREVKTRMLDALHAREDI-AIR--VHSYRLEGRTKAL------VFRQNKRADDVHDIIGFRIIVAPKRPGTRASSATGGAGRTRSATGGNTAEEAENAGARKRPGDDRRRGGPRPARSVFTVKTFPPPYR-----------DADSRLLHDVYEVLVGLFEEVPGRFKNYVDFPKKNGYRSVHTTV-VHPTGIKMEFQVRTALMHVAAEGGSASHSLYKGDLDNPEEASLFR 845          
BLAST of NO04G01430 vs. NCBI_GenBank
Match: XP_024363069.1 (uncharacterized protein LOC112276189 isoform X2 [Physcomitrella patens] >PNR59534.1 hypothetical protein PHYPA_002325 [Physcomitrella patens])

HSP 1 Score: 171.0 bits (432), Expect = 1.600e-38
Identity = 133/439 (30.30%), Postives = 200/439 (45.56%), Query Frame = 0
Query:  374 SEEEVLDNLDRVIETTQLLLELEADADTVLAALATYFLGLDDNATAGGGAESARDRT---EKLAVVNSQCGPIVHQIVQDSARLGGLFQAPPEVTQFRRNPKEYQAMLD-LDHHNAQLIREYLMAANSDARAFVVHMAGLVYALRNQYRLPVHARHLLALESLQLYVPVASALGLGPRLKEMEELSYRALFPESYERFASWHKNFADMGQVALLVARKQIASHIEADIHGLRQYLKGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVVLTPALGSTGATTAGGLMLRRTRSSGRNSLPARSMATTAVFVGEEGEEXXXXXRGHLMXXXXXXXXXXXXXXXXXXXSLDFDAWLCHQVHKIVTSLWEEVPGRYKNYVDNPKPNGYRSLHTGVYLMDGGGTA---EIQIRTADMHMEAEEGVASHALYKAELQTTDQ 806
            S E+  + L+R +    +L +L  DA+ + A       GL       G  ++AR  T    ++A++   CG + H                              ++LD LD  + Q  R++ +A + D RA VV +A  +  +R+   LP + + +LALE++Q+Y PVA A+G+G    E+E+L +R LFP+SY     W + +   G   +   ++ + S +E D   ++  ++G EI GR KS  S  KK+ R  + PEE+ D+LGLRVVLTP                  R SG + +  R                                                 A  C++  +I T+LW+EVPGR K+Y+  PK NGY SLH+ V L   G  +   EIQIRTA+M   AE G+ASH+LYK  L   DQ
Sbjct:  341 STEDGREVLNRALSVAFILADLRMDAEVIAA-------GLLREVFEAGYLDTARVETVLCNEVAILLKDCGRVKHM----------------------------PSLLDTLDEASVQATRQFCLAFH-DVRAVVVEVAARLVIMRHSQSLPRYKQQMLALETMQIYAPVAHAMGIGKLSHELEDLGFRVLFPDSYTYIGGWLEQYFADGHEVVQQCKEDLQSALEEDSE-MQSLVEGIEISGRCKSKYSTMKKLLRDGRPPEEVFDVLGLRVVLTP------------------RKSGTSPVKERG------------------------------------------------ARACYRALEIATTLWKEVPGRLKDYITEPKKNGYESLHSAVSLSTRGNWSPLMEIQIRTAEMDEMAEGGLASHSLYKGGLTDPDQ 676          
BLAST of NO04G01430 vs. NCBI_GenBank
Match: XP_024363061.1 (uncharacterized protein LOC112276189 isoform X1 [Physcomitrella patens])

HSP 1 Score: 171.0 bits (432), Expect = 1.600e-38
Identity = 133/439 (30.30%), Postives = 200/439 (45.56%), Query Frame = 0
Query:  374 SEEEVLDNLDRVIETTQLLLELEADADTVLAALATYFLGLDDNATAGGGAESARDRT---EKLAVVNSQCGPIVHQIVQDSARLGGLFQAPPEVTQFRRNPKEYQAMLD-LDHHNAQLIREYLMAANSDARAFVVHMAGLVYALRNQYRLPVHARHLLALESLQLYVPVASALGLGPRLKEMEELSYRALFPESYERFASWHKNFADMGQVALLVARKQIASHIEADIHGLRQYLKGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVVLTPALGSTGATTAGGLMLRRTRSSGRNSLPARSMATTAVFVGEEGEEXXXXXRGHLMXXXXXXXXXXXXXXXXXXXSLDFDAWLCHQVHKIVTSLWEEVPGRYKNYVDNPKPNGYRSLHTGVYLMDGGGTA---EIQIRTADMHMEAEEGVASHALYKAELQTTDQ 806
            S E+  + L+R +    +L +L  DA+ + A       GL       G  ++AR  T    ++A++   CG + H                              ++LD LD  + Q  R++ +A + D RA VV +A  +  +R+   LP + + +LALE++Q+Y PVA A+G+G    E+E+L +R LFP+SY     W + +   G   +   ++ + S +E D   ++  ++G EI GR KS  S  KK+ R  + PEE+ D+LGLRVVLTP                  R SG + +  R                                                 A  C++  +I T+LW+EVPGR K+Y+  PK NGY SLH+ V L   G  +   EIQIRTA+M   AE G+ASH+LYK  L   DQ
Sbjct:  349 STEDGREVLNRALSVAFILADLRMDAEVIAA-------GLLREVFEAGYLDTARVETVLCNEVAILLKDCGRVKHM----------------------------PSLLDTLDEASVQATRQFCLAFH-DVRAVVVEVAARLVIMRHSQSLPRYKQQMLALETMQIYAPVAHAMGIGKLSHELEDLGFRVLFPDSYTYIGGWLEQYFADGHEVVQQCKEDLQSALEEDSE-MQSLVEGIEISGRCKSKYSTMKKLLRDGRPPEEVFDVLGLRVVLTP------------------RKSGTSPVKERG------------------------------------------------ARACYRALEIATTLWKEVPGRLKDYITEPKKNGYESLHSAVSLSTRGNWSPLMEIQIRTAEMDEMAEGGLASHSLYKGGLTDPDQ 684          
BLAST of NO04G01430 vs. NCBI_GenBank
Match: XP_024363075.1 (uncharacterized protein LOC112276189 isoform X3 [Physcomitrella patens] >XP_024363082.1 uncharacterized protein LOC112276189 isoform X3 [Physcomitrella patens])

HSP 1 Score: 171.0 bits (432), Expect = 1.600e-38
Identity = 133/439 (30.30%), Postives = 200/439 (45.56%), Query Frame = 0
Query:  374 SEEEVLDNLDRVIETTQLLLELEADADTVLAALATYFLGLDDNATAGGGAESARDRT---EKLAVVNSQCGPIVHQIVQDSARLGGLFQAPPEVTQFRRNPKEYQAMLD-LDHHNAQLIREYLMAANSDARAFVVHMAGLVYALRNQYRLPVHARHLLALESLQLYVPVASALGLGPRLKEMEELSYRALFPESYERFASWHKNFADMGQVALLVARKQIASHIEADIHGLRQYLKGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVVLTPALGSTGATTAGGLMLRRTRSSGRNSLPARSMATTAVFVGEEGEEXXXXXRGHLMXXXXXXXXXXXXXXXXXXXSLDFDAWLCHQVHKIVTSLWEEVPGRYKNYVDNPKPNGYRSLHTGVYLMDGGGTA---EIQIRTADMHMEAEEGVASHALYKAELQTTDQ 806
            S E+  + L+R +    +L +L  DA+ + A       GL       G  ++AR  T    ++A++   CG + H                              ++LD LD  + Q  R++ +A + D RA VV +A  +  +R+   LP + + +LALE++Q+Y PVA A+G+G    E+E+L +R LFP+SY     W + +   G   +   ++ + S +E D   ++  ++G EI GR KS  S  KK+ R  + PEE+ D+LGLRVVLTP                  R SG + +  R                                                 A  C++  +I T+LW+EVPGR K+Y+  PK NGY SLH+ V L   G  +   EIQIRTA+M   AE G+ASH+LYK  L   DQ
Sbjct:  332 STEDGREVLNRALSVAFILADLRMDAEVIAA-------GLLREVFEAGYLDTARVETVLCNEVAILLKDCGRVKHM----------------------------PSLLDTLDEASVQATRQFCLAFH-DVRAVVVEVAARLVIMRHSQSLPRYKQQMLALETMQIYAPVAHAMGIGKLSHELEDLGFRVLFPDSYTYIGGWLEQYFADGHEVVQQCKEDLQSALEEDSE-MQSLVEGIEISGRCKSKYSTMKKLLRDGRPPEEVFDVLGLRVVLTP------------------RKSGTSPVKERG------------------------------------------------ARACYRALEIATTLWKEVPGRLKDYITEPKKNGYESLHSAVSLSTRGNWSPLMEIQIRTAEMDEMAEGGLASHSLYKGGLTDPDQ 667          
BLAST of NO04G01430 vs. NCBI_GenBank
Match: XP_005705135.1 (guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Galdieria sulphuraria] >EME28615.1 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Galdieria sulphuraria])

HSP 1 Score: 164.1 bits (414), Expect = 2.000e-36
Identity = 106/325 (32.62%), Postives = 167/325 (51.38%), Query Frame = 0
Query:  477 MLDLDHHNAQLIREYLMAANSDARAFVVHMAGLVYALRNQYRLPVHARHLLALESLQLYVPVASALGLGPRLKEMEELSYRALFPESYERFASWHKNFADMGQVALLVARKQIASHIEADIHGLRQYLKGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVVLTPALGSTGATTAGGLMLRRTRSSGRNSLPARSMATTAVFVGEEGEEXXXXXRGHLMXXXXXXXXXXXXXXXXXXXSLDFDAWLCHQVHKIVTSLWEEVPGRYKNYVDNPKPNGYRSLHTGVYLMDGGGTAEIQIRTADMHMEAEEGVASHALYKAELQ 802
            MLD+   N+  ++ +L A+ +D+RA ++ +   +++LR  Y+ P++ +   ALE+LQ++VP+ASA G G  + EM + S R LFP+SY +   WH    D GQ  L  A++++ + +  D   L +  + + I GR K++VS F K+ +++K  E++ D + +RVV+                  R R   R                E G+                                D +  +C +V++IV+SLW+EV GRYK+YV  PKPNGYRS+HT V     G   E+QIRT +MH+ AE G ASH  YK E++
Sbjct:  319 MLDMPEGNSTWVKTHLWASITDSRAVLLRLVERLWSLRQIYKWPLYIQQSTALETLQVFVPLASAAGFGRHMYEMGDRSLRILFPQSYLKLEKWHLRIRDNGQRVLSCAQRELLTCLMRDPF-LVRLAEQFTITGRTKNMVSTFMKMLKQNKTKEQILDFIAMRVVI------------------RLRPGVR---------------VEHGD--------------------------------DTELAVCTRVYEIVSSLWKEVEGRYKDYVIAPKPNGYRSIHTTVQ-HPSGFPVEVQIRTEEMHLLAEHGTASHRFYKGEIE 576          
BLAST of NO04G01430 vs. NCBI_GenBank
Match: XP_024374482.1 (uncharacterized protein LOC112281806 [Physcomitrella patens] >XP_024374490.1 uncharacterized protein LOC112281806 [Physcomitrella patens] >XP_024374499.1 uncharacterized protein LOC112281806 [Physcomitrella patens] >PNR62974.1 hypothetical protein PHYPA_001399 [Physcomitrella patens])

HSP 1 Score: 161.8 bits (408), Expect = 9.900e-36
Identity = 134/429 (31.24%), Postives = 198/429 (46.15%), Query Frame = 0
Query:  382 LDRVIETTQLLLELEADADTVLAALATYFLGLDDNATAGGGAESARDRTEKLAVVNSQCGPIVHQIVQDSARLGGLFQAPPEVTQFRRNPKEYQAMLD-LDHHNAQLIREYLMAANSDARAFVVHMAGLVYALRNQYRLPVHARHLLALESLQLYVPVASALGLGPRLKEMEELSYRALFPESYERFASWHK-NFADMGQVALLVARKQIASHIEADIHGLRQYLKGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVVLTPALGSTGATTAGGLMLRRTRSSGRNSLPARSMATTAVFVGEEGEEXXXXXRGHLMXXXXXXXXXXXXXXXXXXXSLDFDAWLCHQVHKIVTSLWEEVPGRYKNYVDNPKPNGYRSLHTGVYLMDGGGTA---EIQIRTADMHMEAEEGVASHALYKAELQTTDQ 806
            L R +    +L +L  DA+ + A L      L +   AG            +A V    G  V  +++D AR+                 K   ++LD LD  + + IR+Y +A + D RA VV +A  +  LR+   LP + + +L+LE++Q+Y P+A A+G G    E+E+L +R LFP+SY    SW K +FAD GQ  +   +  +   +E D   ++  ++  +I GR KS  S  KK+ R  + PEE+ D+LGLRVVLTP                  R  G +S+  R                                                 A  C++  +I T+LWEEVPGR K+Y+  PK NGY SLH  V L + G  +   E+QIRT +M+  AE G+ASH+LYK  L   +Q
Sbjct:  355 LSRALSVAFILADLRMDAEVIAAGL------LREVVEAG---------YLNIAGVERVLGKEVAILLEDCARV-----------------KYMPSLLDTLDDASVKAIRQYCLAFH-DVRAIVVEVAARLDTLRHIQVLPRYRQQMLSLETMQIYAPLAHAMGTGKVSHELEDLGFRVLFPDSYTYIGSWLKLHFAD-GQKVVQQCQNDLQKALEEDPE-MQSLIESVKISGRCKSKYSTMKKLLRDGRPPEEVFDVLGLRVVLTP------------------RKEGTSSVKKRG------------------------------------------------ARACYKALEIATTLWEEVPGRLKDYIAKPKKNGYESLHLAVTLSNRGNWSTLMEVQIRTEEMNEMAEGGLASHSLYKGGLTDPEQ 682          
BLAST of NO04G01430 vs. NCBI_GenBank
Match: EFJ21650.1 (hypothetical protein SELMODRAFT_21858, partial [Selaginella moellendorffii])

HSP 1 Score: 161.4 bits (407), Expect = 1.300e-35
Identity = 109/335 (32.54%), Postives = 168/335 (50.15%), Query Frame = 0
Query:  479 DLDHHNAQLIREYLMAANSDARAFVVHMAGLVYALRNQYRLPVHARHLLALESLQLYVPVASALGLGPRLKEMEELSYRALFPESYERFASWHKNFADMGQVALLVARKQIASHIEADIHGLRQYLKGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVVLTPALGSTGATTAGGLMLRRTRSSGRNSLPARSMATTAVFVGEEGEEXXXXXRGHLMXXXXXXXXXXXXXXXXXXXSLDFDAWLCHQVHKIVTSLWEEVPGRYKNYVDNPKPNGYRSLHTGVYLMDGGGTA---EIQIRTADMHMEAEEGVASHALYKAELQTTDQVEQFQ 811
            +LD  NA ++R++ +A + D RA VV +A  +  +R+   LP   + + ALE++QLY P+A ALGLG   +E+E++++R LFP+SY+    W ++    G+  +  + KQ+ + +EAD   L+  ++  ++ GR KS  S  KK+ R  + P++++D+LGLRV+L P    TGA    G+                                                                    C++  KIVT++W+EVPGR K+Y+  PK NGY SLH  V+L   G  +   E+QIRT+ MH  A  G +SHALYK  L    QVE F+
Sbjct:  119 NLDDENANMLRDFSLAYH-DIRAMVVELASRLNEMRHVDCLPRLRQQMAALENMQLYAPLAHALGLGTLSQELEDMAFRILFPDSYQCVEDWLQSHWGDGEAIIAESIKQLKAALEAD-SVLQGMVESVKVTGRRKSRFSTMKKLLRDGRGPDQVYDILGLRVILFP---KTGAGEEAGIA------------------------------------------------------------------ACYRAQKIVTNMWKEVPGRMKDYIAKPKLNGYSSLHLAVFLTKYGPWSLPMELQIRTSAMHAHAVAGGSSHALYKGGLTDPRQVENFK 382          
BLAST of NO04G01430 vs. NCBI_GenBank
Match: XP_002977041.2 (probable GTP diphosphokinase CRSH1, chloroplastic [Selaginella moellendorffii])

HSP 1 Score: 161.4 bits (407), Expect = 1.300e-35
Identity = 109/335 (32.54%), Postives = 168/335 (50.15%), Query Frame = 0
Query:  479 DLDHHNAQLIREYLMAANSDARAFVVHMAGLVYALRNQYRLPVHARHLLALESLQLYVPVASALGLGPRLKEMEELSYRALFPESYERFASWHKNFADMGQVALLVARKQIASHIEADIHGLRQYLKGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVVLTPALGSTGATTAGGLMLRRTRSSGRNSLPARSMATTAVFVGEEGEEXXXXXRGHLMXXXXXXXXXXXXXXXXXXXSLDFDAWLCHQVHKIVTSLWEEVPGRYKNYVDNPKPNGYRSLHTGVYLMDGGGTA---EIQIRTADMHMEAEEGVASHALYKAELQTTDQVEQFQ 811
            +LD  NA ++R++ +A + D RA VV +A  +  +R+   LP   + + ALE++QLY P+A ALGLG   +E+E++++R LFP+SY+    W ++    G+  +  + KQ+ + +EAD   L+  ++  ++ GR KS  S  KK+ R  + P++++D+LGLRV+L P    TGA    G+                                                                    C++  KIVT++W+EVPGR K+Y+  PK NGY SLH  V+L   G  +   E+QIRT+ MH  A  G +SHALYK  L    QVE F+
Sbjct:  245 NLDDENANMLRDFSLAYH-DIRAMVVELASRLNEMRHVDCLPRLRQQMAALENMQLYAPLAHALGLGTLSQELEDMAFRILFPDSYQCVEDWLQSHWGDGEAIIAESIKQLKAALEAD-SVLQGMVESVKVTGRRKSRFSTMKKLLRDGRGPDQVYDILGLRVILFP---KTGAGEEAGIA------------------------------------------------------------------ACYRAQKIVTNMWKEVPGRMKDYIAKPKLNGYSSLHLAVFLTKYGPWSLPMELQIRTSAMHAHAVAGGSSHALYKGGLTDPRQVENFK 508          
BLAST of NO04G01430 vs. NCBI_GenBank
Match: EFJ33802.1 (hypothetical protein SELMODRAFT_83164 [Selaginella moellendorffii])

HSP 1 Score: 161.0 bits (406), Expect = 1.700e-35
Identity = 109/335 (32.54%), Postives = 168/335 (50.15%), Query Frame = 0
Query:  479 DLDHHNAQLIREYLMAANSDARAFVVHMAGLVYALRNQYRLPVHARHLLALESLQLYVPVASALGLGPRLKEMEELSYRALFPESYERFASWHKNFADMGQVALLVARKQIASHIEADIHGLRQYLKGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVVLTPALGSTGATTAGGLMLRRTRSSGRNSLPARSMATTAVFVGEEGEEXXXXXRGHLMXXXXXXXXXXXXXXXXXXXSLDFDAWLCHQVHKIVTSLWEEVPGRYKNYVDNPKPNGYRSLHTGVYLMDGGGTA---EIQIRTADMHMEAEEGVASHALYKAELQTTDQVEQFQ 811
            +LD  NA ++R++ +A + D RA VV +A  +  +R+   LP   + + ALE++QLY P+A ALGLG   +E+E++++R LFP+SY+    W ++    G+  +  + KQ+ + +EAD   L+  ++  ++ GR KS  S  KK+ R  + P++++D+LGLRV+L P    TGA    G+                                                                    C++  KIVT++W+EVPGR K+Y+  PK NGY SLH  V+L   G  +   E+QIRT+ MH  A  G +SHALYK  L    QVE F+
Sbjct:  244 NLDDENANMLRDFSLAYH-DIRAMVVELASRLDEMRHVDCLPRLRQQMAALENMQLYAPLAHALGLGTLSQELEDMAFRILFPDSYQCVEDWLQSHWGDGEAIIAESIKQLKAALEAD-SVLQGMVESVKVTGRRKSRFSTMKKLLRDGRGPDQVYDILGLRVILFP---KTGAGEEAGIA------------------------------------------------------------------ACYRAQKIVTNMWKEVPGRMKDYIAKPKLNGYSSLHLAVFLTKYGPWSLPMELQIRTSAMHAHAVAGGSSHALYKGGLTDPRQVENFK 507          
The following BLAST results are available for this feature:
BLAST of NO04G01430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28606.13.500e-22763.68ppgpp synthetase [Nannochloropsis gaditana][more]
CBJ27227.13.700e-5125.79GTP diphosphokinase [Ectocarpus siliculosus][more]
XP_024363069.11.600e-3830.30uncharacterized protein LOC112276189 isoform X2 [P... [more]
XP_024363061.11.600e-3830.30uncharacterized protein LOC112276189 isoform X1 [P... [more]
XP_024363075.11.600e-3830.30uncharacterized protein LOC112276189 isoform X3 [P... [more]
XP_005705135.12.000e-3632.62guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohyd... [more]
XP_024374482.19.900e-3631.24uncharacterized protein LOC112281806 [Physcomitrel... [more]
EFJ21650.11.300e-3532.54hypothetical protein SELMODRAFT_21858, partial [Se... [more]
XP_002977041.21.300e-3532.54probable GTP diphosphokinase CRSH1, chloroplastic ... [more]
EFJ33802.11.700e-3532.54hypothetical protein SELMODRAFT_83164 [Selaginella... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL079nonsL079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR109ngnoR109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009671NSK009671Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G01430.1NO04G01430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578443gene_1930Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100009g26gene2039Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G01430.1NO04G01430.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G01430 ID=NO04G01430|Name=NO04G01430|organism=Nannochloropsis oceanica|type=gene|length=3219bp
TGGGGTGGGTGGGGCAAGGGAAGCGTGGGCGTCAAATCAGGCGGTACATT
GTTAGAAGGCCGAGGCATACTAGGTCATGAGATGGGGGTTTAAGCAGTGG
AGTGGCGGTAGCGCTTTGGACAGGGCTTTTTCAGGTAGTAACGGGTCATG
TTTATCTTTATACAAACCCGCGCTTACCCTCCTGAAGCAGGCTACTTACC
CGTCAGCTGGCTCCTCCTTGTTGCCCTGTCTCATACATGACCAATACACG
ACATTAATCAAAACTCACCACAAAGACACAACACACACAGTACTATCTAA
ACTGCCTATTTAAGCATCGGGGTGGCCGGGGTAGGGTCCCCTCCCACCGA
GCGCCAAACTTGGGGCAGCTGCAATCAAAGCAACGTCACCGTGCTGTACC
CCTCCTCGACGTAGATGGGAGCCACCCAAAAGACATGGCCTGTCAGGCTA
CTGTCCGTTCTCTGCTTGCTGCTTGTTCTACTGGGTAGCCATAGGATAGA
TGGATGGGTAGGAAGCCATGCAGGGAGCCTTGGACGACGACAGAAGCACC
ATGTGCCTCGGAGAAGACGGCCGCCCACGCAGCTTCTGCCTCCCTTGCCT
GTACAAGTGCTTGCCTGGACCTCAACCAGTGCATCGCGGGCTTCCTCGTC
GTCCTCCTCCTCGTCGTCGTCCTCCTCCTCGTCGTCCTCATCCTCGTCCG
CGTCCTCCCCATTCTCCTCGCCCTCTGTGGATGATGAAGCGAATCCTGGC
GTCTCAGGATCCAGAGATGACGACACCTCCACACCTACACTTACCGCAGT
GACAATTGAATTGACAGACTGGGTGTCCGAGGGGGAGGAGCTCTGGCAAA
ATGCCCCTTCCATGCGTCGCAACAAGGGAAATGTCAAGGAACCACTACCA
AATTCTAAAACAACGAAGGGGGCGGCGCAAGTGCGGGCACGCGAAACGGC
ATCTTCATCCCTTTCTGACAGCATCACAGCCTTGGGCTTCATGGACTCCG
AGAGAGATGATTCGAAAGAGGTTGAACATGAGCAGGAGCAGCAACTCCCC
GTCAAGCTACAGCGAGAGGTCAATCTCGTTTGGTATGAGATTCAACAGGG
GGGTCGCATGGCCTACCTGCCACCGGAGGAGCGAGCCAGATTGAAGCAGC
AGTTGGTGGTGCTCGCTTTCTTTCGCACTCTATTTGAGCACCCTGGCCAG
GTTCTCAACACGCAGAGTGCCGAAGACTGTTTCCAGCAGGCGGACGTGAA
CCGAGACGGGCAATTGAGTTTTGAGGAGTTTTTGCGGTGGTACACGGCCA
GTCATGACAAGGGCAAGAGCAGGAGCAGGAGCAGCAGCAACAGCAGCAGT
AATGGTAGTATTAGCAGCAGCAGCAGAAAAAGCACGGGTCTGGTGCCGTT
CGGGCAAGGCGCGGCGGCGAAGAGCTTGGAAGGCGTGGCGATGAAAGATT
TGCTACGACAGTTTCTGGTGGAGAAGAAGCAGCAGCGACAGGGGCAGCAG
CAGCTACATTTCTACGAACAGGACAAAGCAAAAAGTGAGGAGGAAGTGCT
GGACAATCTGGACCGCGTCATCGAAACCACTCAATTACTTCTTGAGCTCG
AAGCAGACGCCGACACAGTCCTGGCAGCCCTGGCTACTTACTTCCTCGGC
TTGGACGACAACGCCACCGCAGGGGGAGGGGCGGAAAGTGCGCGAGACCG
CACCGAGAAGCTTGCGGTGGTAAATTCCCAATGTGGTCCAATCGTGCACC
AAATCGTTCAAGATAGCGCGAGGCTCGGGGGGCTATTTCAGGCCCCTCCA
GAGGTGACGCAATTTCGGCGGAATCCGAAGGAGTACCAAGCCATGCTCGA
CCTGGATCATCACAACGCCCAGCTAATACGGGAATATCTTATGGCAGCAA
ACAGCGACGCTCGGGCTTTCGTGGTCCATATGGCGGGGTTGGTGTATGCA
TTGCGAAACCAATATCGGTTGCCTGTTCATGCAAGACATCTCCTTGCCCT
TGAAAGCCTACAGCTCTATGTACCTGTCGCTTCCGCCCTCGGCCTGGGCC
CTCGCCTCAAAGAGATGGAAGAGCTGAGCTACCGTGCGCTTTTCCCTGAA
TCTTACGAGCGATTTGCTTCCTGGCATAAAAATTTTGCGGACATGGGCCA
AGTTGCTTTGCTCGTAGCAAGAAAACAAATAGCGTCTCACATTGAGGCGG
ACATCCACGGCCTCAGACAGTACTTGAAAGGCTACGAGATCCACGGGCGG
GTAAAGTCGGTCGTGTCTGCGTTCAAGAAAGTGTACCGCAAGGATAAGCT
GCCGGAGGAACTGCATGATATGCTGGGCTTACGCGTGGTGCTGACCCCGG
CGTTGGGATCGACGGGGGCGACAACCGCGGGGGGGTTGATGCTCCGAAGG
ACCCGCAGTAGTGGGAGAAATTCCTTGCCTGCACGCTCGATGGCCACTAC
TGCTGTCTTTGTTGGGGAGGAAGGAGAGGAGGAGAGGAAGAGCAGTAGGG
GCCATTTGATGCCAGCAGGAGCGTTGTCCTCGTCCTCTCCCCCCTCCTCC
CCCTCCTCCTCCCCCCCATCGCTTGATTTCGACGCCTGGCTCTGCCATCA
AGTCCACAAAATCGTCACGTCCCTTTGGGAGGAGGTCCCGGGACGATACA
AAAACTATGTCGATAATCCCAAGCCGAATGGGTACCGCTCCCTCCACACC
GGCGTGTATTTGATGGATGGGGGGGGCACGGCCGAGATTCAGATTCGAAC
GGCGGACATGCATATGGAGGCGGAGGAAGGGGTGGCATCGCATGCGTTGT
ACAAGGCGGAGTTGCAGACGACGGACCAGGTGGAGCAATTCCAGCAGCAG
CTGGGGGGAGGGAGGGTGACGACGACGACGACGACAAGCAGTAGCAGCAC
GAGCAGTAGCAGCACGAGCAGTAGCAGCACGAGCAGCACCAAGCCGGCTG
AAGCGAAGAAGGAAATGAAGCGAACTTTGTTATTGCCAGCAGAGGTGACT
TCAACGCCAGTTGCCCTGGCTGTACGGGTGGCGAAAGAAGAACCTCAGCC
TTAATGTGCATGTTTGTTTGTATGTTCATCATGTGTTATAGGGATAATGT
AAATTGAGACTGATGTGCGTATATACATGGGCAATTATCATATTGAGTTA
TCTATGCATTGAATGAAATGAGAAAATGAAAAACTGACAAGGAAGTGTTT
AAAACATGGCTATATTGTG
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protein sequence of NO04G01430.1

>NO04G01430.1-protein ID=NO04G01430.1-protein|Name=NO04G01430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=880bp
MGATQKTWPVRLLSVLCLLLVLLGSHRIDGWVGSHAGSLGRRQKHHVPRR
RRPPTQLLPPLPVQVLAWTSTSASRASSSSSSSSSSSSSSSSSSSASSPF
SSPSVDDEANPGVSGSRDDDTSTPTLTAVTIELTDWVSEGEELWQNAPSM
RRNKGNVKEPLPNSKTTKGAAQVRARETASSSLSDSITALGFMDSERDDS
KEVEHEQEQQLPVKLQREVNLVWYEIQQGGRMAYLPPEERARLKQQLVVL
AFFRTLFEHPGQVLNTQSAEDCFQQADVNRDGQLSFEEFLRWYTASHDKG
KSRSRSSSNSSSNGSISSSSRKSTGLVPFGQGAAAKSLEGVAMKDLLRQF
LVEKKQQRQGQQQLHFYEQDKAKSEEEVLDNLDRVIETTQLLLELEADAD
TVLAALATYFLGLDDNATAGGGAESARDRTEKLAVVNSQCGPIVHQIVQD
SARLGGLFQAPPEVTQFRRNPKEYQAMLDLDHHNAQLIREYLMAANSDAR
AFVVHMAGLVYALRNQYRLPVHARHLLALESLQLYVPVASALGLGPRLKE
MEELSYRALFPESYERFASWHKNFADMGQVALLVARKQIASHIEADIHGL
RQYLKGYEIHGRVKSVVSAFKKVYRKDKLPEELHDMLGLRVVLTPALGST
GATTAGGLMLRRTRSSGRNSLPARSMATTAVFVGEEGEEERKSSRGHLMP
AGALSSSSPPSSPSSSPPSLDFDAWLCHQVHKIVTSLWEEVPGRYKNYVD
NPKPNGYRSLHTGVYLMDGGGTAEIQIRTADMHMEAEEGVASHALYKAEL
QTTDQVEQFQQQLGGGRVTTTTTTSSSSTSSSSTSSSSTSSTKPAEAKKE
MKRTLLLPAEVTSTPVALAVRVAKEEPQP*
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Synonyms
Publications