NO04G01340, NO04G01340 (gene) Nannochloropsis oceanica

Overview
NameNO04G01340
Unique NameNO04G01340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2974
Alignment locationchr4:418015..420988 -

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Properties
Property NameValue
DescriptionPhosphoinositol transporter
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:418015..420988 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036865CRAL-TRIO_dom_sf
IPR036273CRAL/TRIO_N_dom_sf
IPR001251CRAL-TRIO_dom
Homology
BLAST of NO04G01340 vs. NCBI_GenBank
Match: EWM28612.1 (phosphoinositol transporter [Nannochloropsis gaditana])

HSP 1 Score: 525.0 bits (1351), Expect = 4.000e-145
Identity = 330/791 (41.72%), Postives = 412/791 (52.09%), Query Frame = 0
Query:    1 MGQA-PATFVSPFATPPLMVNTDDLVRNWLTDENTHQLCHKRHCHEAVPRRRRSSHFRRHSHGVDQLASLLDENVTHSVNADLHKPDEEESHDSEPASPDVTLVTVRRQDGVEVVISRDIAYGTAVRLVNLHDQEEVVFTFSDRSMVRLPADAIIAKAGMGEMLYALDGGHSRGRSRSQDRGNIGGNSSGAEIVSTNEVLQAPVFF------PPHRFDVHHELVCRVERALAPAPPTTRGELQIVLPQMVNDREVHFALILVNMACWHRDLTGLTLLLLGVMLVAEAFKRHAAEVAQGQGGQQRHRQLLRAVVWDLELIAERCMCRQKRFTRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAMAVRRKESMDVIAVLAALGRPAVPLRYLMVTGNNVQKAQEKWEATLKWRAAYRADTILEAPHTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIWHYVWINEFIYSRWVPDPDGQIITVVDISGLSMSGMSTRSIEFISRSLTLIQAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVFSTAQTFSALCEYIEPDQIPVEYGGNLRYAPLEGTQEWAKHQEMPHSVRWTSPLEREMEEHVHRVIAARKGGAMGKENGAEEEEVSAGSAAVG 785
            MGQA  ++FVSPFA PPLM+NTDDLVRNW+TD N     H      +  RR RS   +  S      +  +D  VT  V        E + H     SP    + +R Q+G EV++SR+  +G   RL     Q+++V   SD   V LPA AI  KAGMGEML+  +     GRSR++DR             ST + +  P+        P  R    H+ +C  +  +A    +   +LQ VLP++ +D E H AL+LVN+ACWHRDL GLTLL LG++LVAEAF+ H  E+  G+GG  R RQLLRAV WD E+   RC+ R +R +                                                                                                                                                                   +  A RR+   ++      + RP +PLRYL VTGNNV KAQ KW ATL+WRAAY ADTILEAPHT Y  IKK FPQF+AGRSRSGNPVYYEM+ +IDAR L SQGVDVDEMI HYVW NE+IYSRWVPDP+GQII+VVD+SGLS+ GMST S+EF+S++LTLI AHYPARAQ IL+VNAP FFSYIW +VKGAADEYTS +LKV+S  ++F+ALCEYIEP QIPVEYGG L+Y    G  E  KH E  HSVRWTSP E+EME H +R+I + K G MG  +  +E+++   S A G
Sbjct:    1 MGQAQTSSFVSPFAAPPLMLNTDDLVRNWMTDGNNDTRYHYHGQSRSERRRCRSDGAKASS-----TSPPVDNGVT-GVMVQCGPQIESQKHKLLSTSPAFIFMMIRHQNGEEVILSREAVHGATSRLTYSRHQKDIVLVLSDHPAVHLPARAIATKAGMGEMLFVRE-----GRSRARDR-------------STEKRICKPMHSMTLLARPGGR---SHDFLCGFQNIIATVLSSV--QLQAVLPRVASDWEAHLALVLVNVACWHRDLPGLTLLFLGMLLVAEAFRWHTIEIVLGEGG--RDRQLLRAVPWDWEVNIGRCLMRWRRVS-----------------------------CASPRISKARPAITTRSVMKEEEMAVFGETQVILEEMIDLEETVEQVAMSEEELAVTVIPSGNSVALSEVSAQETDRSIYGSQRQASDTVIAAEHRPRSTDATAATVHEVEEAEVSACPFACPLEYSEKNPSSSEIAAPRRRSIENISITSTGVRRPPLPLRYLTVTGNNVAKAQAKWAATLRWRAAYGADTILEAPHTNYGLIKKQFPQFVAGRSRSGNPVYYEMSTRIDARALTSQGVDVDEMIRHYVWTNEYIYSRWVPDPEGQIISVVDLSGLSIGGMSTLSLEFVSKALTLIGAHYPARAQAILIVNAPIFFSYIWNLVKGAADEYTSKSLKVYSRDESFAALCEYIEPAQIPVEYGGTLKYGASRGMNEERKH-ERQHSVRWTSPFEKEMEAHANRIIESTKCGIMGSND--DEKKIERRSVAGG 728          
BLAST of NO04G01340 vs. NCBI_GenBank
Match: XP_005854247.1 (phosphoinositol transporter [Nannochloropsis gaditana CCMP526] >EKU22113.1 phosphoinositol transporter [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 394.8 bits (1013), Expect = 6.200e-106
Identity = 196/296 (66.22%), Postives = 235/296 (79.39%), Query Frame = 0
Query:  490 MAVRRKESMDVIAVLA-ALGRPAVPLRYLMVTGNNVQKAQEKWEATLKWRAAYRADTILEAPHTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIWHYVWINEFIYSRWVPDPDGQIITVVDISGLSMSGMSTRSIEFISRSLTLIQAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVFSTAQTFSALCEYIEPDQIPVEYGGNLRYAPLEGTQEWAKHQEMPHSVRWTSPLEREMEEHVHRVIAARKGGAMGKENGAEEEEVSAGSAAVG 785
            +A  R+ S++ I++ +  + RP +PLRYL VTGNNV KAQ KW ATL+WRAAY ADTILEAPHT Y  IKK FPQF+AGRSRSGNPVYYEM+ +IDAR L SQGVDVDEMI HYVW NE+IYSRWVPDP+GQII+VVD+SGLS+ GMST S+EF+S++LTLI AHYPARAQ IL+VNAP FFSYIW +VKGAADEYTS +LKV+S  ++F+ALCEYIEP QIPVEYGG L+Y    G  E  KH E  HSVRWTSP E+EME H +R+I + K G MG  +  +E+++   S A G
Sbjct:  118 IAAPRRRSIENISITSTGVRRPPLPLRYLTVTGNNVAKAQAKWAATLRWRAAYGADTILEAPHTNYGLIKKQFPQFVAGRSRSGNPVYYEMSTRIDARALTSQGVDVDEMIRHYVWTNEYIYSRWVPDPEGQIISVVDLSGLSIGGMSTLSLEFVSKALTLIGAHYPARAQAILIVNAPIFFSYIWNLVKGAADEYTSKSLKVYSRDESFAALCEYIEPAQIPVEYGGTLKYGASRGMNEERKH-ERQHSVRWTSPFEKEMEAHANRIIESTKCGIMGSND--DEKKIERRSVAGG 410          
BLAST of NO04G01340 vs. NCBI_GenBank
Match: EWM26753.1 (phosphoinositol transporter [Nannochloropsis gaditana])

HSP 1 Score: 183.3 bits (464), Expect = 2.800e-42
Identity = 83/231 (35.93%), Postives = 138/231 (59.74%), Query Frame = 0
Query:  523 NVQKAQEKWEATLKWRAAYRADTILEAPHTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIWHYVWINEFIYSRWVPDPDGQIITVVDISGLSMSGMSTRSIEFISRSLTLIQAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVFSTAQTFSALCEYIEPDQIPVEYGGNLRYAPLEGTQEWAKHQEMPHSVRWTSPLEREMEEHV 754
            ++++A+ +W  TL+WR  +  D ILE PH  +  IK  +P +   + R+G PVYYE + ++D R + + G  V+E++WHY+W+ EF Y++  P    + IT++D+ G+ +  ++  + +F+ RS+ LI  HYP R+ VI++V AP +FS +WKI++   +  T    K+ S  +TF  + E+++P+ IPVEYGG L+Y+            + P S R  SP E  M E V
Sbjct:  109 DMEEAKRRWRITLQWRKEFGTDEILEKPHKFFDLIKDAYPHWYCCQGRTGQPVYYERSGQVDQRRMRAAGCGVEELVWHYIWMTEFCYNQLHPSETAKTITILDVQGVGIRDLAGEAFDFLRRSIHLIGEHYPERSLVIMIVGAPTWFSVLWKIIRPLINSRTQAKCKICSKKETFQTIKEFVDPEFIPVEYGGLLKYS------------DQPDSCRRQSPEEVRMREFV 327          
BLAST of NO04G01340 vs. NCBI_GenBank
Match: EWM28528.1 (phosphoinositol transporter [Nannochloropsis gaditana])

HSP 1 Score: 168.3 bits (425), Expect = 9.400e-38
Identity = 80/242 (33.06%), Postives = 134/242 (55.37%), Query Frame = 0
Query:  512 VPLRYLMVTGNNVQKAQEKWEATLKWRAAYRADTILEAPHTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIWHYVWINEFIYSRWVPDPDGQIITVVDISGLSMSGMSTRSIEFISRSLTLIQAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVFSTAQTFSALCEYIEPDQIPVEYGGNLRYAPLEGTQEWAKHQEMPHSVRWTSPLEREMEEHV 754
            +P R++     ++ +A  +W  T +WR  Y  D IL+ P   +  IK+ +P +  G   +G+PVY+E + ++D   +   G  +DE++ HYV + EF + +  PD   + ITV  + G+ +  ++  + +F+ RS+ LI  HYP R+ VI++ NAP +F+ +WKI++   +E T   +K+ S  +T   L E+I  + IPVEYGG LR+   +G            + RW SP E  + EHV
Sbjct:  368 LPQRFIDGCLGDMTEAMRRWNLTCEWRREYGTDGILDEPQPYFDLIKQCYPSWYCGEGINGDPVYWERSGQVDQPRMRVAGCGIDELLRHYVMVTEFCWVKLYPDETKKTITVFSVEGVGIRDLAGEAFDFLRRSIHLISEHYPERSAVIMITNAPSWFAVLWKIIRPMVNERTQKKVKIVSKKETLECLKEFIPEENIPVEYGGKLRFG--DGVD----------TARWKSPQEVALREHV 597          
BLAST of NO04G01340 vs. NCBI_GenBank
Match: CCA24767.1 (SEC14 cytosolic factor putative [Albugo laibachii Nc14])

HSP 1 Score: 162.5 bits (410), Expect = 5.200e-36
Identity = 78/203 (38.42%), Postives = 119/203 (58.62%), Query Frame = 0
Query:  515 RYLMVTGNNVQKAQEKWEATLKWRAAYRADTILEAPHTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIWHYVWINEFIYSRWVPDPDGQIITVVDISGLSMSGMSTRSIEFISRSLTLIQAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVF-STAQTFSALCEYIEPDQIPVEYGG 717
            R++     N ++ +E++  TL WR     D IL  PH  +  IKK +PQ+  GRS++GNPVYYE   KID   L   G+ ++++I+HY++I EF+++   PD   + ITV+D+SG+ MS +    ++FI R+ T   AHYP R+  I ++N P +F+ IW+IVK   D  T   + +          L + I+ DQIP EYGG
Sbjct:  456 RFIAAEKGNEERGKERYLQTLSWRKENDVDQILRRPHRNFENIKKCYPQYFHGRSKAGNPVYYEKPGKIDLLVLKQLGLSIEDLIYHYMYITEFLWTYIEPDDAARSITVLDVSGIGMSSLGGEVLDFIKRASTFTAAHYPERSAHIFIINIPGWFNMIWRIVKPLIDPVTREKVHMLKGRGSILRELKQLIDIDQIPEEYGG 658          
BLAST of NO04G01340 vs. NCBI_GenBank
Match: CCI10131.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 157.5 bits (397), Expect = 1.700e-34
Identity = 96/293 (32.76%), Postives = 154/293 (52.56%), Query Frame = 0
Query:  515 RYLMVTGNNVQKAQEKWEATLKWRAAYRADTILEAPHTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIWHYVWINEFIYSRWVPDPDGQIITVVDISGLSMSGMSTRSIEFISRSLTLIQAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVF-STAQTFSALCEYIEPDQIPVEYGGNLRYAPLEGTQEWAKHQ----------EMPHSVRWT-----SPLEREMEEHVHRVIAAR-KGGAMGKE------NGAEEEEVSAGSAAVG 785
            R++     N +K +E++  T+ WR  +  D IL  PH  +  IKK +PQ+  GRS++GNPVYYE   KID   L   G+ ++++I+HY++I EF+++   P+   + ITV+D+SG+ MS +    ++FI R+ +   AHYP R+  I ++N P +F+ IW+IVK   D  T + + +    +     L + I+ DQIP EYGG+   APL        H            MPH    T       L   +  H   ++ AR K   + KE      NG ++ ++ AG+ ++G
Sbjct:  455 RFIAAEKGNEEKGKERYLQTVAWRKEHELDQILRKPHHNFDKIKKCYPQYFHGRSKAGNPVYYEKPGKIDLVALKQLGLSIEDLIYHYMYITEFLWTYIEPEDAARSITVLDVSGIGMSSLGGEVLDFIKRASSFTAAHYPERSAHIFIINIPGWFNMIWRIVKPLIDPVTRDKVHMLKGRSSILRELKQLIDIDQIPEEYGGH--GAPLGNHALALAHHGKELGIPVTCVMPHIAPLTKITSCQNLGANVVLHGAHILEARVKADEIAKEQGLKYINGFDDPDIIAGAGSMG 745          
BLAST of NO04G01340 vs. NCBI_GenBank
Match: XP_009521431.1 (hypothetical protein PHYSODRAFT_479932 [Phytophthora sojae] >EGZ26143.1 hypothetical protein PHYSODRAFT_479932 [Phytophthora sojae])

HSP 1 Score: 156.4 bits (394), Expect = 3.700e-34
Identity = 70/202 (34.65%), Postives = 119/202 (58.91%), Query Frame = 0
Query:  515 RYLMVTGNNVQKAQEKWEATLKWRAAYRADTILEAPHTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIWHYVWINEFIYSRWVPDPDGQIITVVDISGLSMSGMSTRSIEFISRSLTLIQAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVFSTAQTFSALCEYIEPDQIPVEYGG 717
            R++     +V+K + ++EATL+WR     D IL  PH  +  IKKY+PQ+  G++R G+PVYYE   KID   L  +G+ +D+++ HY+++ E+++    PD  G+ ITV+D++G+ M  +    ++FI R+     AHYP R+  I ++N P +F+ IW++VK   D  T   + +   +     L   I+ + IP ++GG
Sbjct:  484 RFIAGEKGDVEKGRARYEATLQWRKENDIDNILVTPHPNFEIIKKYYPQYFHGKTRDGHPVYYERPGKIDLPALKREGLSIDDLLRHYMYMTEYLWRVVEPDDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPLIDPVTREKVHMLKGSAILKELETLIDMENIPSDFGG 685          
BLAST of NO04G01340 vs. NCBI_GenBank
Match: GBG29514.1 (Phosphatidylinositol/phosphatidylcholine transfer protein SFH9 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 156.4 bits (394), Expect = 3.700e-34
Identity = 78/244 (31.97%), Postives = 134/244 (54.92%), Query Frame = 0
Query:  515 RYLMVTGNNVQKAQEKWEATLKWRAAYRADTILEAPHTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIWHYVWINEFIYSRWVPDPDGQIITVVDISGLSMSGMSTRSIEFISRSLTLIQAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVFSTAQTFS-ALCEYIEPDQIPVEYGGNLRYAPLEGTQEWAKHQEMPHSVRWTSPLEREMEEHVHRVI 758
            R+L     N + A ++W  T +WR   + D IL+ PH +YH +KK+ P +  GR ++G+PVY +   K+  + +   G+ + ++I+H+++ +E ++S   P  DG+ I+++D++G+SM   +   ++F+ R++ L   HYP RA  I ++NAP FF+ +W +VK   DE T   + +F +  TF   L E I+ D +P  YGG     PL+ + E                 ER +  HV RV+
Sbjct:  710 RFLAGEKGNTEAAIQRWARTCEWRVEGKIDEILDQPHPRYHVLKKHVPNYYCGRGKTGHPVYIDQPGKVKMKAVRRAGLKLSDLIFHFIYSSEALWSMIEPSEDGRTISILDLNGVSMFDFAGEVVDFVKRTIALSGEHYPERAYRIYVINAPRFFAGVWSVVKPWVDEETRKKIGIFRSISTFKPVLLEEIDEDVLPEMYGGT-NTKPLDQSYE-----------------ERLLNSHVCRVL 935          
BLAST of NO04G01340 vs. NCBI_GenBank
Match: XP_002905217.1 (SEC14 cytosolic factor, putative [Phytophthora infestans T30-4] >EEY53599.1 SEC14 cytosolic factor, putative [Phytophthora infestans T30-4])

HSP 1 Score: 154.8 bits (390), Expect = 1.100e-33
Identity = 70/202 (34.65%), Postives = 117/202 (57.92%), Query Frame = 0
Query:  515 RYLMVTGNNVQKAQEKWEATLKWRAAYRADTILEAPHTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIWHYVWINEFIYSRWVPDPDGQIITVVDISGLSMSGMSTRSIEFISRSLTLIQAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVFSTAQTFSALCEYIEPDQIPVEYGG 717
            R++     + +K   ++ ATL+WR     D IL  PHT +  IKKY+PQ+  G++R G PVYYE   KID   L  +G+ +D+++ HY++I E+++    P+  G+ ITV+D++G+ M  +    ++FI R+     AHYP R+  I ++N P +F+ IW++VK   D  T   + +   +     L   I+P+ IP ++GG
Sbjct:  473 RFIAAEKGDERKGHARYLATLEWREVNNIDNILVTPHTTFDTIKKYYPQYFHGKTRDGLPVYYERPGKIDLTALKREGLSIDDLLRHYMYITEYLWRVVEPNDSGRSITVLDVTGIGMYDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMVKPMIDPVTREKVHMLKGSAILKELETLIDPENIPSDFGG 674          
BLAST of NO04G01340 vs. NCBI_GenBank
Match: GAX93036.1 (threonine dehydratase catabolic putative [Pythium insidiosum])

HSP 1 Score: 154.5 bits (389), Expect = 1.400e-33
Identity = 72/216 (33.33%), Postives = 123/216 (56.94%), Query Frame = 0
Query:  505 AALGRPAVPL--RYLMVTGNNVQKAQEKWEATLKWRAAYRADTILEAPHTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIWHYVWINEFIYSRWVPDPDGQIITVVDISGLSMSGMSTRSIEFISRSLTLIQAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVFSTAQTFSALCEYIEPDQIPVEYGGNL 719
            AA+    +P   R++     + +K ++++E TL+WR     D +L  PH  +  IKKY+PQ+  GRS+SG PVYYE    ID   L  +G+ +++++ HY++I E+++    P   G+ +TV+D+SG+ MS +    ++FI R+     AHYP R+  I ++N P +F+ IW+++K   D  T   + +   +     L   I+P+ IP + GG L
Sbjct:  298 AAISGGPIPFSHRFIAAEKGDEEKGRQRYENTLQWRKENDIDNMLVKPHKTFDTIKKYYPQYFHGRSKSGCPVYYEQPGXIDLAGLKREGLSIEDLLHHYMYITEYLWRVIEPSDTGRSVTVLDVSGIGMSDLGGEVLDFIKRASAFTGAHYPERSAHIFIINIPGWFNMIWRMIKPLIDPVTREKIHMLKGSAILKELETLIDPEDIPSDLGGQL 513          
The following BLAST results are available for this feature:
BLAST of NO04G01340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28612.14.000e-14541.72phosphoinositol transporter [Nannochloropsis gadit... [more]
XP_005854247.16.200e-10666.22phosphoinositol transporter [Nannochloropsis gadit... [more]
EWM26753.12.800e-4235.93phosphoinositol transporter [Nannochloropsis gadit... [more]
EWM28528.19.400e-3833.06phosphoinositol transporter [Nannochloropsis gadit... [more]
CCA24767.15.200e-3638.42SEC14 cytosolic factor putative [Albugo laibachii ... [more]
CCI10131.11.700e-3432.76unnamed protein product [Albugo candida][more]
XP_009521431.13.700e-3434.65hypothetical protein PHYSODRAFT_479932 [Phytophtho... [more]
GBG29514.13.700e-3431.97Phosphatidylinositol/phosphatidylcholine transfer ... [more]
XP_002905217.11.100e-3334.65SEC14 cytosolic factor, putative [Phytophthora inf... [more]
GAX93036.11.400e-3333.33threonine dehydratase catabolic putative [Pythium ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL079nonsL079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR109ngnoR109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009680NSK009680Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G01340.1NO04G01340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578411gene_1918Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100009g15gene2048Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G01340.1NO04G01340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G01340 ID=NO04G01340|Name=NO04G01340|organism=Nannochloropsis oceanica|type=gene|length=2974bp
TCCACCCCTGCCCAACACACACATgtatgagctccaaattatcactgctg
acatgaatgctgagtttcaatggtcaatagtctcgacgaggtggccaaga
agccaccaagaccgcgaataaagcacagatgggccctgtgagatgcatgc
ataggaagcaagcgcgcccccacccaccaacgcgccgcgccgatgtagga
gcccatttaccagattctcgcaataaattcccaaaatatgcttgcgtgca
ccatcttaagccctgaaatggacgcttctgtacacttcgtgagatctcta
cgtccttctccaccccagtactcacctctcccattcctcaccccccctcc
cccattcctcacccccccctccccacaccatacgcagCCCTTTCATGGGC
CAGGCCCCAGCCACCTTTGTCAGTCCTTTTGCTACCCCTCCTCTTATGGT
TAACACTGACGACCTGGTGCGCAATTGGCTGACGGATGAGAACACTCACC
AGCTTTGCCACAAACGCCATTGCCATGAAGCAGTGCCGCGACGCCGGCGG
AGCAGCCACTTTCGCCGTCATTCCCACGGTGTGGATCAACTGGCATCATT
GCTGGATGAAAATGTAACTCATTCGGTCAATGCGGATCTGCATAAACCCG
ATGAGGAGGAATCGCATGATTCGGAGCCTGCGTCGCCGGATGTGACCCTT
GTGACCGTCCGGAGGCAGGATGGAGTGGAGGTGGTGATTTCGCGTGACAT
TGCCTATGGCACAGCTGTGCGTCTGGTCAATTTACACGACCAAGAGGAAG
TAGTATTTACGTTTAGCGATCGTTCTATGGTACGGCTGCCTGCTGACGCC
ATTATTGCCAAGGCGGGGATGGGCGAGATGCTATATGCATTGGACGGGGG
TCATTCTCGGGGCCGGTCGCGGAGCCAGGACCGGGGCAACATCGGCGGAA
ACTCTAGCGGTGCCGAGATTGTGAGCACGAATGAGGTCCTTCAGGCACCT
GTTTTCTTTCCTCCGCATCGTTTCGATGTGCACCATGAGCTGGTCTGCCG
TGTCGAGAGAGCATTGGCGCCTGCCCCTCCTACCACACGAGGAGAGCTCC
AGATCGTGCTGCCGCAGATGGTGAATGATAGGGAAGTTCATTTTGCCCTC
ATCCTCGTCAATATGGCGTGCTGGCACCGGGATCTAACCGGACTAACCCT
GCTCTTACTCGGGGTCATGCTTGTTGCGGAGGCCTTCAAACGACACGCTG
CAGAGGTAGCACAGGGGCAAGGAGGACAACAGCGCCACCGGCAGCTCTTG
AGGGCAGTGGTCTGGGATTTGGAACTGATTGCAGAACGATGCATGTGCCG
ACAAAAGCGTTTCACTCGTACCTCCACTACGATGATGAGGACGAGGACGA
GGACAACAACGACGACTACCACCACAGTGCTGCGGCGGAAGAGCGTGGTG
CTGGTGGAAGAGGAGCGGGCGAGGACGAGCGGGGCGATAATAATCAACGG
GCAGGCGGAGAAGGAAATTGTTATGAGCGATGACCAGACGGCGTTGGCAG
ATGAAGAAGCATCAGCAGGAAAAACAGCACCACCATCGTCACCATCACCA
TCACCTGCAGGAGCAAGGGCAAGCTCTGCCTCTGCAGCTGCTACGCAAGC
CGAAGCGAGTGAGAGCGTGCGGCGACCTCAACGAAAAGTTTCGGATGTCA
TTATCGCCACTTCACGTCGCTCGTTATCCATGATAGCTACTGCGGCCTTG
ATGCAGGAAGTTGAAGAAGAGGAGGAGTTGAAGGAAGAGGTGGTGGATGA
GGAAGAGGGGGTCCTGGCGGCCACGACGACTAAAACCAAGATAATGGCTG
CTGCTGATGCGATGGCGGTTCGAAGGAAGGAGAGCATGGATGTCATTGCT
GTTCTGGCTGCATTGGGAAGACCAGCAGTGCCTTTAAGGTATCTGATGGT
GACGGGCAATAATGTGCAGAAAGCACAAGAGAAGTGGGAGGCGACCCTGA
AATGGCGGGCGGCTTACCGGGCAGACACGATTTTGGAAGCACCACACACG
CAATATCATTTTATTAAGAAATACTTCCCGCAATTCATGGCTGGGAGAAG
TAGGAGTGGAAATCCGGTGgtacgttggagggaggcttggtttgtgtgta
tatctgtgtgcgtgtgcctgtcacatttcgcagcgaatatacttatatgt
cttccttcactctctcactcacttcatccttctttctactccatagTACT
ATGAAATGAATGCGAAGATCGACGCACGGACCCTCGTGTCGCAAGGGGTG
GACGTGGACGAGATGATCTGGCACTATGTTTGGATCAATGAGTTTATCTA
CTCTCGCTGGGTGCCTGACCCCGATGGACAAATTATCACCGTTGTGGATA
TTTCTGGTCTCTCTATGAGCGGCATGTCGACCCGCTCAATCGAATTCATC
TCCAGGTCCTTAACTCTGATTCAAGCCCATTATCCTGCCCGGGCTCAGGT
TATTTTGTTGGTAAACGCCCCGTTTTTCTTTTCTTACATCTGGAAGATTG
TCAAGGGGGCGGCGGATGAATATACAAGCAATACATTGAAGGTGTTTAGC
ACCGCGCAGACATTTTCGGCTTTGTGTGAATATATCGAGCCAGATCAGAT
TCCTGTAGAATATGGAGGAAACTTGAGGTATGCCCCACTGGAAGGCACGC
AGGAGTGGGCGAAGCACCAGGAGATGCCGCATAGCGTGAGGTGGACCAGT
CCTTTGGAGCGAGAGATGGAGGAGCATGTACATCGTGTCATAGCGGCAAG
AAAGGGTGGTGCGATGGGGAAGGAGAATGGAGCAGAAGAGGAAGAGGTGA
GCGCAGGCAGCGCAGCGGTGGGGGCGGCGTAAAATAGTTGGGTAGTAAAA
TGGTAGGGAATGCAGAGTATAAAAATGATGTGTTGAATGCAGACAACCAA
ACCAATTTGAATACATGTGCTGTT
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protein sequence of NO04G01340.1

>NO04G01340.1-protein ID=NO04G01340.1-protein|Name=NO04G01340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=787bp
MGQAPATFVSPFATPPLMVNTDDLVRNWLTDENTHQLCHKRHCHEAVPRR
RRSSHFRRHSHGVDQLASLLDENVTHSVNADLHKPDEEESHDSEPASPDV
TLVTVRRQDGVEVVISRDIAYGTAVRLVNLHDQEEVVFTFSDRSMVRLPA
DAIIAKAGMGEMLYALDGGHSRGRSRSQDRGNIGGNSSGAEIVSTNEVLQ
APVFFPPHRFDVHHELVCRVERALAPAPPTTRGELQIVLPQMVNDREVHF
ALILVNMACWHRDLTGLTLLLLGVMLVAEAFKRHAAEVAQGQGGQQRHRQ
LLRAVVWDLELIAERCMCRQKRFTRTSTTMMRTRTRTTTTTTTTVLRRKS
VVLVEEERARTSGAIIINGQAEKEIVMSDDQTALADEEASAGKTAPPSSP
SPSPAGARASSASAAATQAEASESVRRPQRKVSDVIIATSRRSLSMIATA
ALMQEVEEEEELKEEVVDEEEGVLAATTTKTKIMAAADAMAVRRKESMDV
IAVLAALGRPAVPLRYLMVTGNNVQKAQEKWEATLKWRAAYRADTILEAP
HTQYHFIKKYFPQFMAGRSRSGNPVYYEMNAKIDARTLVSQGVDVDEMIW
HYVWINEFIYSRWVPDPDGQIITVVDISGLSMSGMSTRSIEFISRSLTLI
QAHYPARAQVILLVNAPFFFSYIWKIVKGAADEYTSNTLKVFSTAQTFSA
LCEYIEPDQIPVEYGGNLRYAPLEGTQEWAKHQEMPHSVRWTSPLEREME
EHVHRVIAARKGGAMGKENGAEEEEVSAGSAAVGAA*
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Synonyms
Publications