NO04G01170, NO04G01170 (gene) Nannochloropsis oceanica

Overview
NameNO04G01170
Unique NameNO04G01170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1566
Alignment locationchr4:371862..373427 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:371862..373427 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO04G01170 vs. NCBI_GenBank
Match: EWM21339.1 (hypothetical protein Naga_100075g21 [Nannochloropsis gaditana])

HSP 1 Score: 183.0 bits (463), Expect = 2.500e-42
Identity = 117/412 (28.40%), Postives = 196/412 (47.57%), Query Frame = 0
Query:  118 DSDVYRIKGRFPAARYFSIQSYEFSNGKAIASMLDRDIRPATGKNPYNDLSASPAHRGTFDIYLTAHGNQGLPNELQVKRPGNHLEEKEPVTII-YRMYDADVYAARGDEGAWTPKQQFWGFTDPAVVEHRTH-DGRWTEVPACTDFGSAL-------FQATFTDLYPVLKHFPATAASCPMAQLSDDVFPSMILFGAGLEQGYAASITSYTNYDTRYLYWCAQEAKMGPNMVIRMQGKLPRVPQGLYSGERLPRVAQSELYDARYISISTIDMLFPSPTYQEVEDHDIERFYSEVPGWAEHDRTYSIIFSIDQKVALACNLYDADTQLFLAWDDAYDYGLGPTRMPSIVYRELLPTPAAGGRSLKDVDKACHA---------VEKTACGDGSFIRGVMGDIYPRIDVFECD 512
            + +VYRI+G+FP  RYFS   Y+ S  ++I+++ D DIRP++GKNP+ND+  +  + GT++IY++  G++G PNE+   RP    +   P  ++ +R+   D  A     G    K + WG+ D  +VE   H +G W  +  C+D   A           TF   +P       T  +     L D     +I  G  +            N +  Y++WC  +     + +IR+ GKLPR P GL+      RVA +  YD+RY+S ++ D +   P+Y+ + D DI   YS  P  ++ DR Y+++ + D  +A  C LY+    + L    +  +   P  +P+IV R LLP    GG+  +  +   +            K  C      + ++ + YP + ++ CD
Sbjct:  155 EEEVYRIRGKFPYVRYFSFTVYDASL-QSISTLHDTDIRPSSGKNPFNDIEVTEDNMGTYEIYVSKDGSKGYPNEMAALRP----DSTSPYALLAFRLQLLDPRAGEDRSG----KNREWGYVDMPLVEILNHRNGEWDIIRRCSDEFQARTEEVIENLDLTFNTWWPKNLQI-GTECNATEFSLFDPEQNPIIRRGVAVR-----------NANENYIFWCMPKEIGKKDYIIRITGKLPRTPYGLFDD---IRVADTARYDSRYVSFTSADAIPLYPSYETIHDRDIFNHYSTDPFGSDWDRMYNLVATSDVNLAKKCGLYNRAEDVLLQLTRSPTFTHLP-HVPAIVMRHLLP---GGGKERRGTEGVANVNLRNECESPTGKLLCDPARSAKVLLQEFYPLVQIWTCD 538          
BLAST of NO04G01170 vs. NCBI_GenBank
Match: EWM25941.1 (hypothetical protein Naga_100469g5 [Nannochloropsis gaditana])

HSP 1 Score: 156.8 bits (395), Expect = 1.900e-34
Identity = 127/461 (27.55%), Postives = 211/461 (45.77%), Query Frame = 0
Query:   80 GSKWPRCAWQVATEPSASSFGLLDLNAFYHTLVIWDFHDSDVYRIKGRFPAARYFSIQSYEFSNGKA-IASMLDRDIRPATGKNPYNDLSASPAHRGTFDIYLTAHGNQGLPNELQVKRPGNHLEEKEPVTIIYRMYDADVYAARGDEGAWTPKQQFWGFTDPAV-VEHRTHDGR--WTEVPACT--------DFGSALFQ-----ATFTD---LYPVLKHFPATAASCPMAQLSDDVFPSMILF-GAGLEQGYAASITSYTNYDTRYLYWCA---QEAKMGPNMVIRMQGKLPRVPQGLYSGERLPRVAQSELYDARYISISTIDMLFPSPTYQEVEDHDIERFYS-EVPGWAEHDRTYSIIFSIDQKVALACNLYDADTQLFLAWDDAYDYGLGPTRMPSIVYRELLPTPAAGGRSLKDVDKACHAVEKTACGDGSFIRGVMGDIYPRIDVFECDPTTG 516
            G  WP C W      + + FGL+D NA Y   ++     +  Y++KGRFP + YFS Q Y      A    + D  ++P  G NP+++  A+P   G +++YLT  G +G  NEL++  P   + +     +I RMY  D            P         P + + H   +G+  W  +P C+        D  +A ++     AT T+   + P+L+       +CPM     +V  S +LF G  L    A +  S    D+ Y+ +C     + +   N +++++ KLP +  GL+SG R+  V     Y+ RY+S+ST D  +  PT   ++   ++RFY+    G +  D    I  ++++  A ACN + +D  +FL  +      + P +   +  R +L   A G +S     KAC       CG+  FIR +M + YP ++V+ CD   G
Sbjct:  120 GYSWPHCYWHAKYAINYTHFGLIDPNAVYWGQLVRGSGANVAYKMKGRFPKSIYFSWQVYASQTSAAPDQKITDFHVKPLWGTNPFSNPDATPEDMGGYEVYLTPSGEEGYVNELRL--PNATINQ-----LILRMYKPDPILG--------PSISIIDLEPPTLYMAHDMGEGKREWRALPRCSAAKEKLLADLSNAWYEIQYPHATGTEGRGVIPILREM-----NCPMNPTKGNV--SFVLFQGDWLPPELAIARQS---QDSPYMMYCINPYNDWRHYLNTLLKIRFKLPVIADGLFSGIRVANVGD---YEVRYLSMSTADGFY--PTIASIDGRGMQRFYNYSSAGNSSWDGWVEIRVALNEAKARACNFW-SDQAIFLPLEVE---DVHPAKSIVLFLRSIL---AHGPKSAGAASKACG--NSALCGNPPFIRSIMQEQYPELEVYHCDSCEG 541          
BLAST of NO04G01170 vs. NCBI_GenBank
Match: EWM29475.1 (hypothetical protein Naga_100128g9 [Nannochloropsis gaditana])

HSP 1 Score: 155.6 bits (392), Expect = 4.200e-34
Identity = 128/462 (27.71%), Postives = 200/462 (43.29%), Query Frame = 0
Query:   75 DRGKGGSKWPRCAWQVATEPSASSFGLLDLNAFYH-TLVIWDFHDSDVYRIKGRFPAARYFSIQSYEFSNGKAIASMLDRDIRPATGKNPYNDLSASPAHRGTFDIYLTAHGNQGLPNELQ-VKRPGNHLEEKEPVTIIYRMYDADVYAARGDEGAWTPKQ--QFWGFTDPAVVEHRTHDGR-WTEVPACTD-----FGSALFQATFT--DLYPVLKHFP-ATAASCPMAQLSDDVFPSMILFGAGLEQGYAASITSYTNYDTRYLYWCAQEAKMGPNMVIRMQGKLPRVPQGLYSGERLPRVAQSELYDARYISISTIDMLFPSPTYQEVEDHDIERFYSEVPGWAEHDRTYSIIFSIDQKVALACNLYDADTQLFLAWDDAYDYGLGPTRMPSIVYRELLPTPAAGG-----RSLKDVDKACHAVEKTACGDGSFIRGVMGDIYPRIDVFECDPTTGIAT 519
            D     S++P CAW   T+ S  +  LLD NA Y   L+ +  H   VY+I   FP   YFS ++Y    G  + S+ D  I P+ GKNPY +   +    GT++IY+T  GN+G PNE++ +     +  +     ++  + +  V   R     +T +Q    WG  D  V+ +    G+ W E+  C+D     F  A+ Q  +T  D   ++ H       SC +    +   P++                           +     ++G N V+ ++G  P    GL+ G R   V     Y  RY S +  D+  P PTY  +   D+E FY +  GW   DR Y I+ +    +  AC L D    LFL + +       P  +P+++ RE+L    A G     +S++ V   C    K  C    F++  +GD YP + V+ CD  TGI T
Sbjct:    7 DLAIASSEYPFCAWDATTDESIYTPLLLDPNAVYQPQLLSFAAHPHRVYKISASFPRVVYFSYETYSL-RGHPLTSLPDLRIDPSWGKNPYRE-ETTEEGAGTYEIYVTRDGNKGWPNEVRGLSEDHTNATQAAFSRVMDFVDNLSVVMLR----LYTTEQPPSVWGGVDRPVISYTDDLGQTWKELQPCSDTTRYQFNRAMRQIGWTVYDFRYLIYHSQWYRLRSCHLLSKREADHPAL---------------------------FPDVNVQLGGNFVMVIEGTAPLTATGLFEGPR--PVWNVTNYSTRYWSFAAADVFVPGPTYSSLTAQDMENFYGK--GW---DRRYKIVGATSIDIVKACGLDDPHA-LFLPYKNEL-MNNNPPAVPAVIEREMLARHMAMGLPSDKQSIEYVTSNCGKENK--CLSIDFMKASLGDQYPSLQVYTCDVATGIKT 424          
BLAST of NO04G01170 vs. NCBI_GenBank
Match: EWM26805.1 (protein of unknown function DUF1214 [Nannochloropsis gaditana])

HSP 1 Score: 151.8 bits (382), Expect = 6.100e-33
Identity = 117/411 (28.47%), Postives = 176/411 (42.82%), Query Frame = 0
Query:   76 RGKGGSKWPRCAWQVATEPSASSFGLLDLNAFYHTLVIWDFHDSDVYRIKGRFPAARYFSIQSYEFSNGKAIASMLDRDIRPATGKNPYNDLSASPAHRGTFDIYLTAHGNQGLPNELQVKRPGNHLEEKEPVTIIYRMYDADVYAARGDEGAWTPKQQFWGFTDPAVVEHR--------THDGRWTEVPACTDFGSALFQATFTDLYP---VLKHFPATAASCPMAQLSDDVFPSMILFGAGLEQGYAASITSYTNYDTRYLYWCAQ---EAKMGPNMVIRMQGKLPRVPQGLYSGERLPRVAQSELYDARYISISTIDMLFPSPTYQEVEDHDIERFYSEVPG---WAE-HDRTYSIIFSIDQKVALACNLYDADTQLFLAWDDAYDYGLG-PTRMP---SIVYRELLP 465
            +G  G+    CAW  + +   ++    D  + YH +V  +F  SD+  I+G FP +RYFS+Q+Y+  N   IA + D ++ P+ G N +   S      G F I L+  GN+G PNEL +   GN         ++ RMY  D  A          K   WG+ DP  +  R        T D  W ++P C D  + +     T       +  +F   + SC +  + D        F     +  ++S   + N D  YL  CA    E     +++  +   LP  P   YS  +   +   E YD RY S+S  D+  P P  +   D +I  FY ++ G   W E   R  S++ + +Q     C + D    L L  DD  +   G PT  P   SIVYREL+P
Sbjct:  212 KGGTGAIETDCAWTASADYQTANLFFPDAQSVYHLMVFPNFGPSDLAMIEGEFPDSRYFSVQTYD-ENFSPIAGLKDLEVVPSEGVNSFARKSPLQIRDGRFKIVLSKDGNRGFPNELPI-NVGN-FSSTTTGYVMMRMYGVDPLAKTN-----ANKLAKWGYKDPPTISLRTAGSLTPTTWDQGWKKMPLCPDTNAEIITKAVTTAVNSRLIQMNFKEDSVSCSIENVKDG-------FMLMSRERASSSRAPFVNADGGYLMACANSRPEYIKNNDLIAVVNTFLPSTP---YSKFKARFIGSPETYDMRYASLSVYDLRPPGPVLRTFPDAEIRDFYYDLYGAELWEEGFQRNVSMVVASNQAALDRCKV-DTSESLILTLDDLEEQASGEPTSPPEWWSIVYRELIP 603          
BLAST of NO04G01170 vs. NCBI_GenBank
Match: EWM22223.1 (hypothetical protein Naga_100312g6 [Nannochloropsis gaditana])

HSP 1 Score: 142.5 bits (358), Expect = 3.700e-30
Identity = 119/450 (26.44%), Postives = 183/450 (40.67%), Query Frame = 0
Query:   86 CAWQVATEPSASSFGLLDLNAFYHTLVIWDFH-DSDVYRIKGRFPAARYFSIQSYEFSNGKAIASMLDRDIRPATGKNPYNDLSASPAHRGTFDIYLTAHGNQGLPNELQVKRPGNHLEEKEPVTIIYRMYDADVYAARGDEGAWTPKQQFWGFTDPAVVEHRTHD------GRWTEVPACTDFGSAL---FQATFTDLYP--VLKHFPATAASCPMAQLSDDVFPSMILFGAGLEQGYAASITSYTNYDTRYLYWCAQEAKMGPNMVIRMQGKLPRVPQGLYSGERLPRVAQSELYDARYISISTIDMLFPSPTYQEVEDHDIERFYSEVPG----W-AEHDRTYSIIFSIDQKVALACNLYDADTQLFLAWDDAYDYGLGPTRMPSIVYRELLPTPAAGG------RSLKDVDKACHAVEKTA--CGDGSFIRGVMGDIYPRIDVFEC 511
            CAWQ A+     +    D  A YH L +       DV RI+G +P  RYFS QSY+  +   +AS+ D +I+   G NP+     +   +G + +++T +G+QG PNEL     G++        ++ R+Y  D  +          K   WG   P VV+++  +      G W  +  CT   + +   F +T    Y   +     A A  CP     D       L G G++    A IT                            G LP  P GL++    P VA     +ARY+S+ST D+  P P  Q + D DI  FYS+  G    W   + R Y I+ + D   A  C     D      W             P++V RE+L   +  G      +S+ ++ +AC ++      C   SF   VM + YP++  ++C
Sbjct:   44 CAWQ-ASVGLNFNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSYDPKSLDPVASVRDYEIKSVRGVNPFATPGTTLGDKGKYQVHVTLNGDQGYPNELPTIASGSN---ATGAFVLLRVYAYDKQS--------PDKTDIWGAVAPPVVKYKLFNPSSGQGGLWYTLDQCTPNNTKIASQFISTIATGYSRVLATENKAGANPCPTWNSRD-----QFLDGGGVQGNLVAVIT----------------------------GTLPPSPGGLWTP---PFVADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFYSQYYGSEYLWNLRNSRQYKIVAAADLASAKRCGHLTRDAMFLSTWGQT-----ARVSYPALVLREILSQSSRIGDTANNTQSIHNIKQACESIAGVGAKCETSSFASSVMKNFYPKVTYYDC 440          
BLAST of NO04G01170 vs. NCBI_GenBank
Match: XP_005855631.1 (hypothetical protein NGA_0673800 [Nannochloropsis gaditana CCMP526] >EKU20720.1 hypothetical protein NGA_0673800 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 142.1 bits (357), Expect = 4.800e-30
Identity = 129/458 (28.17%), Postives = 203/458 (44.32%), Query Frame = 0
Query:   86 CAWQVATEPSASSFGLLDLNAFYHTLVIWDFHDSDVYRIKGRFP--AARYFSIQSYEFSNGKAIASMLDRDIR---PATGKNPYNDLSASPAHRGTFDIYLTAHGNQGLPNELQVKRPGNHLEEKEPV--TIIYRMYDAD----VYAARGDEGAWTPKQQFWGFTDPAVVEHR-----THD---GRWTEVPACTDFGSALFQATFTDLYPVLKHFPATAA--SCPMAQLSDDVFPSMILFGAGLEQGYAASITSYTNYDTRYL----YWCAQEAKMGP--NMVIRMQGKLPRVPQGLYSGERLPRVAQSELYDARYISISTIDMLFPSPTYQEVEDHDIERFYS-EVPGWAEHDRTYSIIFSIDQKVALACNLYDADTQLFLAW---DDAYDY-GLGPTRMPSIVYRELLPTPAAGGRSLKDVDKACHAVEKTACGDGSFIRGVMGDIYPRIDVFECD 512
            CAWQ        +    DL A Y  LV+    + +++R++G FP    RYFS+QS     G  I+++ D +I    P   +NP+ + S  P   GT+ I +T  G+QGL NEL +        +   V   ++ R Y +D      +++ D  A  P  + +G+  P +VE R     T D    RW   P C    S       T L  + KHF       + P+    ++ F  ++  G        A+   Y N D  YL    +  + E K  P   ++ R+ G LP   + L++    P++A  +  D RY+S S+I ++   PT   ++D    RFY  + P     +R+YS + + D +    C LY+A  +LFL+        DY G+   ++     R  LP  + G   L+  D    A    AC D  +++ VM D YPRI  + CD
Sbjct:  134 CAWQAYITGKQYNVAYPDLQAIYQVLVMLKTTEKNIFRVRGSFPQEGVRYFSLQSNNVDVGFPISTIKDYEIEVDDPENTRNPFAEDSDRPI--GTYTINVTPRGDQGLKNELSLCPESMTDRQCRSVNAVMLMRFYTSDPDRPPVSSKTDPPASQPNDRLFGYATPPMVEERQFKSWTDDRSRDRWRVFPTCDQTRS----TQVTSL--ISKHFYGMIPPFAPPVRHNKNNNF--VLYLGED-----TATAGVYPNLDAAYLLAVAWQLSPELKDKPKKRLMARVTGTLPVTSRNLFTD---PKIANYKDADVRYMSFSSIALVSGGPTMDTLDDAAFLRFYEPQQPEGEAWNRSYSFVAAEDPE--RTCGLYNASQELFLSTVLDGKLQDYWGILDRQLIPKTQRTRLPDRSNGYARLQCAD----ASALDACVDPDYLKNVMEDYYPRIQWYTCD 567          
BLAST of NO04G01170 vs. NCBI_GenBank
Match: XP_005854425.1 (hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526] >EKU21938.1 hypothetical protein NGA_0235800 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 126.7 bits (317), Expect = 2.100e-25
Identity = 111/439 (25.28%), Postives = 172/439 (39.18%), Query Frame = 0
Query:   86 CAWQVATEPSASSFGLLDLNAFYHTLVIWDFH-DSDVYRIKGRFPAARYFSIQSYEFSNGKAIASMLDRDIRPATGKNPYNDLSASPAHRGTFDIYLTAHGNQGLPNELQVKRPGNHLEEKEPVTIIYRMYDADVYAARGDEGAWTPKQQFWGFTDPAVVEHRTHDGRWTEVPACTDFGSALFQATFTDLYPVLKHFPATAASCPMAQLSDDVFPSMILFGAGLEQGYAASITSYTNYDTRYLYWCAQEAKMGPNMVIRMQGKLPRVPQGLYSGERLPRVAQSELYDARYISISTIDMLFPSPTYQEVEDHDIERFYSEVPG----W-AEHDRTYSIIFSIDQKVALACNLYDADTQLFLAWDDAYDYGLGPTRMPSIVYRELLPTPAAGG------RSLKDVDKACHAVEKTA--CGDGSFIRGVMGDIYPRIDVFEC 511
            CAWQ A+     +    D  A YH L +       DV RI+G +P  RYFS QSY+  +   +AS+ D +I+   G NP+     +   +G + +++T +G+QG PNEL     G++        ++ R+Y  D  +          K   WG   P VV+++  +      P+    G          L+  L  F                       G G++    A IT                            G LP  P GL++    P VA     +ARY+S+ST D+  P P  Q + D DI  FYS+  G    W   + R Y I+ + D   A  C     D      W             P++V RE+L   +  G      +S+ ++ +AC ++      C   SF   VM + YP++  ++C
Sbjct:  190 CAWQ-ASVGLNFNIAFPDGYAVYHVLFVPKLQGPMDVIRIEGDYPFVRYFSYQSYDPKSLDPVASVRDYEIKSVRGVNPFATPGTTLGDKGKYQVHVTLNGDQGYPNELPTIASGSN---ATGAFVLLRVYAYDKQS--------PDKTDIWGAVAPPVVKYKLFN------PSSGQGG----------LWYTLDQFD----------------------GGGVQGNLVAVIT----------------------------GTLPPSPGGLWTP---PFVADFTKSNARYLSLSTYDLNIPGPVLQTLFDSDIVDFYSQYYGSEYLWNLRNSRQYKIVAAADLASAKRCGHLTRDAMFLSTWGQT-----ARVSYPALVLREILSQSSRIGDTANNTQSIHNIKQACESIAGVGAKCETSSFASSVMKNFYPKVTYYDC 542          
BLAST of NO04G01170 vs. NCBI_GenBank
Match: EWM30096.1 (hypothetical protein Naga_100193g4 [Nannochloropsis gaditana])

HSP 1 Score: 126.3 bits (316), Expect = 2.700e-25
Identity = 119/426 (27.93%), Postives = 191/426 (44.84%), Query Frame = 0
Query:  118 DSDVYRIKGRFP--AARYFSIQSYEFSNGKAIASMLDRDIR---PATGKNPYNDLSASPAHRGTFDIYLTAHGNQGLPNELQVKRPGNHLEEKEPV--TIIYRMYDAD----VYAARGDEGAWTPKQQFWGFTDPAVVEHR-----THD---GRWTEVPACTDFGSALFQATFTDLYPVLKHFPATAA--SCPMAQLSDDVFPSMILFGAGLEQGYAASITSYTNYDTRYL----YWCAQEAKMGP--NMVIRMQGKLPRVPQGLYSGERLPRVAQSELYDARYISISTIDMLFPSPTYQEVEDHDIERFYS-EVPGWAEHDRTYSIIFSIDQKVALACNLYDADTQLFLAW---DDAYDY-GLGPTRMPSIVYRELLPTPAAGGRSLKDVDKACHAVEKTACGDGSFIRGVMGDIYPRIDVFECD 512
            + +++R++G FP    RYFS+QS     G  I+++ D +I    P   +NP+ + S  P   GT+ I +T  G+QGL NEL +        +   V   ++ R Y +D      +++ D  A  P  + +G+  P +VE R     T D    RW   P C    S       T L  + KHF       + P+    ++ F  ++  G        A+   Y N D  YL    +  + E K  P   ++ R+ G LP   + L++    P++A  +  D RY+S S+I ++   PT   ++D    RFY  + P     +R+YS + + D +    C LY+A  +LFL+        DY G+   ++     R  LP  + G   L+  D    A    AC D  +++ VM D YPRI  + CD
Sbjct:    6 EKNIFRVRGSFPQEGVRYFSLQSNNVDVGFPISTIKDYEIEVDDPENTRNPFAEDSDRPI--GTYTINVTPRGDQGLKNELSLCPESMTDRQCRSVNAVMLMRFYTSDPDRPPVSSKTDPPASQPNDRLFGYATPPMVEERQFKSWTDDRSRDRWRVFPTCDQTRS----TQVTSL--ISKHFYGMIPPFAPPVRHNKNNNF--VLYLGED-----TATAGVYPNLDAAYLLAVAWQLSPELKDKPKKRLMARVTGTLPVTSRNLFTD---PKIANYKDADVRYMSFSSIALVSGGPTMDTLDDAAFLRFYEPQQPEGEAWNRSYSFVAAEDPE--RTCGLYNASQELFLSTVLDGKLQDYWGILDRQLIPKTQRTRLPDRSNGYARLQCAD----ASALDACVDPDYLKNVMEDYYPRIQWYTCD 407          
BLAST of NO04G01170 vs. NCBI_GenBank
Match: EWM24273.1 (protein of unknown function DUF1214 [Nannochloropsis gaditana])

HSP 1 Score: 113.6 bits (283), Expect = 1.800e-21
Identity = 107/411 (26.03%), Postives = 180/411 (43.80%), Query Frame = 0
Query:   84 PRCAWQVATEPSASSFGLLDLNAFYHTLVIWDFHDSDVYRIKGR-FPAARYFSIQSYEFSNGKAIASMLDRDIRPATGKNPYNDLSASPA--HRGTFDIYLTAHGNQGLPNELQVKRPGNHLEEKEPVTIIYRMYDAD---------VYAARGDEGAWTPKQQFWGFTDPAVVEHR--THDGRWTEVPACTDF---GSALFQATFTDLYPVLKHFPATAASCPMAQLSDDVFP---SMILFGAGLEQG--YAASITSYTNYDTRYLYWCAQEAKMGPNMV-IRMQGKLPRVPQGLYSGERLPRVAQSELYDARYISISTIDMLFPSPTYQEVEDHDIERFY-SEVPGWAEH-DRTYSI-IFSIDQKVALACNLYDADTQLFLAWDDAYDYGLGPTRMPSIVYRELLPTPAA 469
            P C+W+++    + +    D  A +H++V++  ++ + Y ++    P +R+FS Q+Y      +   + D +I    G N Y ++SA+     +G + +YLT  G++G PNELQ  + G   ++     +I+R+YD            + +RGD      + Q WG+T P  V  R     G W E+P+C      G  L+  T+                  +    +D+FP   S   F   L Q   +      +++ DTR L   A    +    V  R++ KLPR P  LYS    P +A    YD RYIS ++    FP  T++ + D  I + Y S + G  E  D  +S+ I  ++        L +A   L + W        G    P+++Y +LL +  A
Sbjct:   63 PLCSWRLS---QSLNVAWTDTQASHHSMVMF-LNEGEEYTVESESLPYSRFFSFQTYSLDGKTSYGILRDAEIVSQNGPNLYANMSAAAGGEKQGGYTLYLTPDGSKGYPNELQTLKYG---QKSGFFVLIFRIYDVGDFPHPMAPWAHLSRGD----ARQPQRWGWTPPPRVSVRRTMRQGSWREIPSCVTRQGPGGKLWSKTYI---------------LGLTNRLEDIFPPSHSYTGFIKPLRQNNFHLPHDHLFSSVDTRTLVSAAAIPAVDVGDVWARVEAKLPRTPSSLYSP---PFIANQSDYDVRYISFTSASRAFPLWTFETLTDKSIRQHYESRLRGPHEQWDGRFSLWIGPVNAPPPEQARLENA---LIMRW--------GEVARPALLYNQLLSSSRA 433          
BLAST of NO04G01170 vs. NCBI_GenBank
Match: XP_005856101.1 (hypothetical protein NGA_0332100 [Nannochloropsis gaditana CCMP526] >EKU20237.1 hypothetical protein NGA_0332100 [Nannochloropsis gaditana CCMP526] >EWM25879.1 hypothetical protein Naga_100054g15 [Nannochloropsis gaditana])

HSP 1 Score: 112.5 bits (280), Expect = 4.100e-21
Identity = 96/404 (23.76%), Postives = 158/404 (39.11%), Query Frame = 0
Query:  121 VYRIKGRFPAARYFSIQSYEFSNGKA--IASMLDRDIRPATGKNPYNDLSASPAHRGTFDIYLTAHGNQGLPNELQVKRPGNHLEEKEPVTIIYRMYDADVYAARGDEGAWTPKQQFWGFTDPAVVEHRTHDGRWTEVPACTDFGSALFQATFTDLYPVLKHFPATAASCPMAQLSDDVFPSMILFGAGLEQGYAASITSYTNYDTRYLYWCAQEAKM--GPNMVIRMQGKLPRVPQGLYSGERLPRVAQSELYDARYISISTIDMLFPSPTYQEVEDHDIERFYSEVPGWAEHDRTYSIIFSIDQKVALACNLYDADTQLFLAWDDAYDYGLGPT---RMPSIVYRELLPTPAAGGRSLKDVDKACHAVEKTACGDGSFIRGVMGDIYPRIDVFECDPTTGIA 518
            V+  KG FP +R FS  +Y  +N +   +  + D D+  +TG NP+     +    G++D+Y+T  G QG PNE++    G+   E   + I+YR+  AD   + G  G   P  +   F+  A        G W  +  C        +    +   + +        C +  + ++               Y      +   D  ++  C   A +  G +M+  + G LP                     D+RY SIS +++  P      V D  +  FY +    A +   Y+II + ++     C L    ++L   W   Y  G         P IVYRE++       +SL+ V  AC A  +  C +  F    MGD YPRI    C  ++G+A
Sbjct:  218 VFNFKGEFPKSRAFSYATYAVANQQVSFVDMISDVDMVASTGSNPFTAGPGNTGASGSYDLYVTPDGKQGFPNEIKTFADGDVTNELSGIIIVYRVIMADGIKSDGWGGVPPPALRVKAFSVLAT-------GLWFNLAPCNPKNDITIENFIENRLALKEGMSDVKVECDVFNMDNNFV-------------YYDDAQYFKTPDENHIISCGNRALLPPGADMITIISGTLPPAS------------------DSRYASISLVNLYPPGRNVYSVSDQSLRNFYWDQGKSAVN---YTIIMAKNKLALNKCGL----SKLPANWYQVYWAGFADALEGSYPGIVYREMMTD--GYEQSLEQVRYACEA--EKDCSNPKFFEQQMGDYYPRISYLSCS-SSGLA 571          
The following BLAST results are available for this feature:
BLAST of NO04G01170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 12
Match NameE-valueIdentityDescription
EWM21339.12.500e-4228.40hypothetical protein Naga_100075g21 [Nannochlorops... [more]
EWM25941.11.900e-3427.55hypothetical protein Naga_100469g5 [Nannochloropsi... [more]
EWM29475.14.200e-3427.71hypothetical protein Naga_100128g9 [Nannochloropsi... [more]
EWM26805.16.100e-3328.47protein of unknown function DUF1214 [Nannochlorops... [more]
EWM22223.13.700e-3026.44hypothetical protein Naga_100312g6 [Nannochloropsi... [more]
XP_005855631.14.800e-3028.17hypothetical protein NGA_0673800 [Nannochloropsis ... [more]
XP_005854425.12.100e-2525.28hypothetical protein NGA_0235800 [Nannochloropsis ... [more]
EWM30096.12.700e-2527.93hypothetical protein Naga_100193g4 [Nannochloropsi... [more]
EWM24273.11.800e-2126.03protein of unknown function DUF1214 [Nannochlorops... [more]
XP_005856101.14.100e-2123.76hypothetical protein NGA_0332100 [Nannochloropsis ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL079nonsL079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR109ngnoR109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009702NSK009702Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G01170.1NO04G01170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|659677gene_1899Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G01170.1NO04G01170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G01170 ID=NO04G01170|Name=NO04G01170|organism=Nannochloropsis oceanica|type=gene|length=1566bp
ATGCAGCCGCAGGCTTTGTCTCGTATTCTGCACCTCGCTCCCTTGCTCCT
CGCCCTCATACCCACTTCCACAGCCAGCGACGTCCTTTTCGAGGCCACCA
ATTTTGCCACGCCGCCATCCAACGAGCCCCACTTTGCGGGTGCGACGGCC
TTGGTGCCACATCCCAGCAAACTTTACCAGTTCTTGGATAAGATGTACCC
TTTCCTCGCTCCACTGCCCCCGGACCGCGGCAAAGGTGGCTCCAAGTGGC
CCAGATGTGCCTGGCAGGTGGCGACGGAGCCGAGTGCTTCGAGCTTTGGC
CTACTGGACTTGAATGCATTTTACCACACTCTAGTCATTTGGGACTTCCA
CGACTCCGATGTTTATCGGATCAAGGGGCGTTTTCCTGCCGCGCGGTACT
TTTCCATTCAGAGCTATGAGTTTAGCAACGGAAAGGCCATTGCGTCCATG
CTGGACCGCGACATTCGACCTGCGACGGGCAAAAACCCTTACAACGATCT
GAGCGCCTCTCCTGCTCACCGCGGAACGTTTGACATCTACTTAACGGCGC
ACGGCAATCAAGGGCTGCCCAATGAATTGCAGGTCAAGCGGCCCGGGAAT
CACTTAGAAGAGAAAGAGCCCGTGACAATCATCTATCGGATGTACGACGC
AGACGTATACGCAGCTCGGGGAGACGAAGGGGCATGGACTCCCAAGCAAC
AGTTTTGGGGCTTTACCGACCCAGCGGTGGTGGAGCATCGAACACATGAC
GGCCGATGGACAGAGGTCCCGGCTTGCACTGACTTCGGCTCAGCTTTGTT
TCAGGCCACTTTTACGGATTTGTACCCCGTATTAAAGCATTTTCCTGCCA
CGGCCGCCTCGTGTCCAATGGCGCAACTATCGGACGATGTGTTTCCATCC
ATGATTCTATTCGGCGCTGGCCTGGAGCAGGGCTATGCGGCCAGCATTAC
TAGCTATACGAACTACGATACGAGATATCTGTATTGGTGCGCACAAGAAG
CCAAGATGGGGCCGAATATGGTGATCCGCATGCAAGGGAAGCTCCCGCGT
GTTCCCCAGGGCCTATATAGCGGTGAAAGATTACCGCGCGTGGCTCAATC
CGAACTTTATGATGCTCGCTATATCTCTATTAGCACCATTGACATGCTTT
TCCCGTCCCCGACCTACCAAGAAGTTGAAGACCACGATATCGAGCGTTTC
TATTCAGAAGTACCGGGCTGGGCAGAACATGATCGAACGTACTCTATTAT
ATTTTCCATAGATCAAAAGGTGGCATTGGCTTGTAATTTATATGATGCCG
ACACACAATTGTTCCTGGCTTGGGACGACGCTTACGACTATGGCCTAGGA
CCCACACGCATGCCCTCGATTGTGTATCGCGAGCTTTTGCCAACGCCGGC
GGCAGGTGGGAGGTCTTTGAAAGATGTTGACAAAGCATGTCACGCCGTTG
AAAAGACGGCGTGTGGGGACGGGAGTTTCATACGGGGCGTCATGGGTGAT
ATTTATCCACGAATCGATGTATTTGAATGTGACCCGACAACGGGGATCGC
GACTTTACTTGCTTGA
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protein sequence of NO04G01170.1

>NO04G01170.1-protein ID=NO04G01170.1-protein|Name=NO04G01170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=522bp
MQPQALSRILHLAPLLLALIPTSTASDVLFEATNFATPPSNEPHFAGATA
LVPHPSKLYQFLDKMYPFLAPLPPDRGKGGSKWPRCAWQVATEPSASSFG
LLDLNAFYHTLVIWDFHDSDVYRIKGRFPAARYFSIQSYEFSNGKAIASM
LDRDIRPATGKNPYNDLSASPAHRGTFDIYLTAHGNQGLPNELQVKRPGN
HLEEKEPVTIIYRMYDADVYAARGDEGAWTPKQQFWGFTDPAVVEHRTHD
GRWTEVPACTDFGSALFQATFTDLYPVLKHFPATAASCPMAQLSDDVFPS
MILFGAGLEQGYAASITSYTNYDTRYLYWCAQEAKMGPNMVIRMQGKLPR
VPQGLYSGERLPRVAQSELYDARYISISTIDMLFPSPTYQEVEDHDIERF
YSEVPGWAEHDRTYSIIFSIDQKVALACNLYDADTQLFLAWDDAYDYGLG
PTRMPSIVYRELLPTPAAGGRSLKDVDKACHAVEKTACGDGSFIRGVMGD
IYPRIDVFECDPTTGIATLLA*
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Synonyms
Publications