NO04G01120, NO04G01120 (gene) Nannochloropsis oceanica

Overview
NameNO04G01120
Unique NameNO04G01120
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1590
Alignment locationchr4:355653..357242 +

Link to JBrowse

Properties
Property NameValue
DescriptionHistone acetyltransferase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:355653..357242 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR036427Bromodomain-like_sf
Homology
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BLAST of NO04G01120 vs. NCBI_GenBank
Match: EWM28508.1 (histone acetyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 233.0 bits (593), Expect = 1.800e-57
Identity = 205/337 (60.83%), Postives = 221/337 (65.58%), Query Frame = 0 
Query:    1 MLAEQRQEAEIARQQQALMAGVAVPSWQRPRKVVKRLIKEVDVDGTERYRVEFLFGVEEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEM-------GRGEYGGNKLVLSVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKKMA----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKKPHLLLNLQFDMIYSEVEPKPYAKPFKRLKGRGMDLERVKKKITDYRYESRQELLDDFSLILRET-EAESGREGGGGVLVEYARAVQAEVIGGVGRLEEGMMANLEMEIQAKNALSLKKRR 326
            +LAEQRQEAEIARQQQALMAGVA+P+WQRPRKVVKRLIKE DVDGTERYRVEFLF  EEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              GGNKLVLSV G                                    LKKMA    XXXXXXXXXXXXX                                        Q+KPHLLLNLQFD+IYS VE KPYAKPFKRL+GRGMDLERVKKKITDYRYESRQELLDDF+ I+RET EAE G  GGGGVL+EY RAVQA+VI GV  L+E  MA LE EI  +NA S++++R
Sbjct: 1306 ILAEQRQEAEIARQQQALMAGVALPTWQRPRKVVKRLIKETDVDGTERYRVEFLFQPEEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDEWTVGGNKLVLSVQG------------------KQKASKRKRASVTLNISSLKKMATEXXXXXXXXXXXXXXXARMLYSRQYLKLGARGSEGADREGREEGAGGGSGSYGRKTQRKPHLLLNLQFDVIYSGVETKPYAKPFKRLRGRGMDLERVKKKITDYRYESRQELLDDFATIVRETVEAEEG--GGGGVLLEYVRAVQADVIEGVRSLDESSMAALEAEIVVQNATSIRRQR 1622
The following BLAST results are available for this feature:
BLAST of NO04G01120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM28508.11.800e-5760.83histone acetyltransferase [Nannochloropsis gaditan... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL079nonsL079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR109ngnoR109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G01120.1NO04G01120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G01120.1NO04G01120.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G01120 ID=NO04G01120|Name=NO04G01120|organism=Nannochloropsis oceanica|type=gene|length=1590bp
ATGTTAGCGGAGCAGAGGCAGGAGGCAGAAATTGCGCGACAGCAGCAGGC
GTTGATGGCGGGGGTGGCGGTGCCGTCGTGGCAACGGCCACGGAAGGTTG
TCAAGAGGCTGATCAAGGAGGTGGATGTCGACGGGACGGAGAGATATCGT
GTGGAGTTCCTTTTTGGCGTGGAGGAGGTGGATCGGGTCAGGAGGGAGCA
GGCGGAACAGCTCCAGAAATTGAGAAGGGAGGCCCGACGGGCCATGAGGA
GGGAGGCGGCGAGGGAGTCCGGGGAGATGGGGAGGGGGGAGTATGGAGGG
AATAAGCTGGTTCTGTCGGTGGCGGGGGGGGGAGAGGCGATGATGTTGCA
GCGAGAGCAGCAGAGAGAGAGAGAAGAGGGGAAGGTTAAGAAGAGGAAGA
GGGAGAAGGCTCGAGTGACCATCAATCTGTCTTCCCTTAAGAAGATGGCC
ACTGAGCACAAGGAACTGAAGAAGAAGAAGAAGAAAGCTGCGGACGAGGA
GGCCAAGAAGCTGTATTCCAAGCAATATTTCACTGGGAGGGAGGGGGAGG
AAGGAGGCGTAGGAGGAGGAGGAGGGGGAGGGGGCGGGCTGGGTGGAGGG
AGGGGGACGCAGAAGAAGCCGCATCTGTTGTTGAATCTGCAGTTTGACAT
GATTTACAGCGAGGTGGAGCCCAAGCCGTATGCAAAGCCTTTCAAACGGT
TGAAGGGGCGGGGCATGGACCTCGAGAGGGTGAAAAAGAAGATTACAGAC
TACCGCTACGAGAGTAGACAGGAGCTGTTGGATGACTTTTCCCTAATCTT
GAGAGAGACGGAGGCGGAGAGCGGGCGAGAGGGAGGGGGGGGGGTGTTGG
TGGAGTATGCGAGGGCGGTGCAGGCTGAAGTGATTGGAGGGGTAGGACGG
TTGGAGGAGGGGATGATGGCAAATTTGGAGATGGAAATTCAGGCGAAGAA
TGCCTTGTCATTAAAGAAGAGGAGGAAGGAGGGAGGACGAGGCGGGGGGA
GGGGTGGAGGACGAGGGAGGGGACGGGGAAGGGGAAGGGGAAGTAAGCAC
GCGGCTCGTGCAGCAACTGCTTCTGCTGTTGTGGGGGATGGTGGGGATGG
GGATCAGGGTCAGGCGGCGCCTCCTGTGTTGTTAGGACCACTGTCGCCCG
CACGTGGAGGAGGAAGAGGAGGGGGAGGATTGGAGGGAGGAGGGATGATG
ATGGACCAACAACCATTGATTTTTGCGGAGGACGACGGGATGAGCGGCGT
GGGAGCAGGAGGAGCAGCAGGAGAAGGGGGTGGAGGAGGAGGACCGTTCA
TCTCTATGCCGGGCATGGCTGCTGGTGAGGATTCGGATAGTGGGGAGGAG
GAGGTATTGCAGGTTGACCAGCTTTAGAAGGAAGGGAGGGAAGGATGTCA
CTTGACGGGATTTGAAATGTGGTGGTGAAGTAGAATGAGTTAAAAGAGAG
ACAAAGAAAAACAACGCGATGTACATATAGACAGTAGGAAGAAAGGGTGG
TTAGCAAAATGGAAGCGAGTAAGATTGTGCTTGGGGGTCTCGAAAGCCCC
CGGAAGCAATCAAAAAAGACAACACATTGATTAAGGCGTG
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protein sequence of NO04G01120.1

>NO04G01120.1-protein ID=NO04G01120.1-protein|Name=NO04G01120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=459bp
MLAEQRQEAEIARQQQALMAGVAVPSWQRPRKVVKRLIKEVDVDGTERYR
VEFLFGVEEVDRVRREQAEQLQKLRREARRAMRREAARESGEMGRGEYGG
NKLVLSVAGGGEAMMLQREQQREREEGKVKKRKREKARVTINLSSLKKMA
TEHKELKKKKKKAADEEAKKLYSKQYFTGREGEEGGVGGGGGGGGGLGGG
RGTQKKPHLLLNLQFDMIYSEVEPKPYAKPFKRLKGRGMDLERVKKKITD
YRYESRQELLDDFSLILRETEAESGREGGGGVLVEYARAVQAEVIGGVGR
LEEGMMANLEMEIQAKNALSLKKRRKEGGRGGGRGGGRGRGRGRGRGSKH
AARAATASAVVGDGGDGDQGQAAPPVLLGPLSPARGGGRGGGGLEGGGMM
MDQQPLIFAEDDGMSGVGAGGAAGEGGGGGGPFISMPGMAAGEDSDSGEE
EVLQVDQL*
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Synonyms
Publications