NO04G01050, NO04G01050 (gene) Nannochloropsis oceanica

Overview
NameNO04G01050
Unique NameNO04G01050
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1392
Alignment locationchr4:336737..338128 -

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Properties
Property NameValue
DescriptionQueuine tRNA-ribosyltransferase catalytic subunit 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:336737..338128 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006400tRNA modification
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016763transferase activity, transferring pentosyl groups
GO:0016740transferase activity
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR036511TGT-like_sf
IPR002616tRNA_ribo_trans-like
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Homology
BLAST of NO04G01050 vs. NCBI_GenBank
Match: EKD48729.1 (hypothetical protein ACD_64C00164G0004 [uncultured bacterium])

HSP 1 Score: 479.2 bits (1232), Expect = 1.500e-131
Identity = 233/379 (61.48%), Postives = 291/379 (76.78%), Query Frame = 0
Query:   85 FRFELLHQSKKEGSRARVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLLLQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDELNMKSRGNKHKSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGVDPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHLPVEKPNHLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLLTKEGPVYIRKQVHKEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGLMARIRGKIMNNEL 464
            FRFEL+HQSKK  SRARVGR+HTPHGI++TP FV V TNG LK++D    +E G +L FCNTYHL+LQPG +VIK  GGLH F+NR+ PIITDSGGFQVFSL +G+V DEL  KS+G K  +  +SVLKI+E+G LFRSYRDG+K+LLTPE+SVQAQK  G+DIIIP DEL PYHID   L+  + R+HRWE RSLNEHLK+   QAMYAVIHGGVDP LR  S + LT+LPFDGFA+GG+LGK RE+++++L+  MPH+PV+KPNHLLGI D  S+     LG+DTFDS  PTR ARHGTL T +G V +   V+K+   P++  C C+TC+ +SRAYLHHL++A E    TL +IHN+ +M  LMA  R KI+ +E+
Sbjct:    5 FRFELIHQSKK--SRARVGRIHTPHGIIDTPNFVGVGTNGTLKSLDSKMVDEIGLQLMFCNTYHLMLQPGAEVIKKAGGLHTFMNRSMPIITDSGGFQVFSLMYGTVKDEL--KSQGKKKGN--NSVLKISEDGVLFRSYRDGKKILLTPETSVQAQKDLGADIIIPFDELPPYHIDRKKLIESLHRTHRWEERSLNEHLKNPNGQAMYAVIHGGVDPELRALSAKTLTALPFDGFAIGGSLGKTREQMIKMLEHLMPHIPVDKPNHLLGIGDIYSLGPCVQLGLDTFDSSHPTRSARHGTLFTTQGLVKLANAVNKDSFEPIDPACSCYTCKHYSRAYLHHLFKAKEMTGYTLASIHNLHFMVQLMADYREKILRDEI 377          
BLAST of NO04G01050 vs. NCBI_GenBank
Match: XP_002293243.1 (queuine tRNA ribosyltransferase, partial [Thalassiosira pseudonana CCMP1335] >EED89704.1 queuine tRNA ribosyltransferase, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 478.8 bits (1231), Expect = 1.900e-131
Identity = 239/412 (58.01%), Postives = 301/412 (73.06%), Query Frame = 0
Query:   70 PPSAEIFPS--YERKDFFRFELLHQSKKEGSRARVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLLLQPGPDVIKACGGLHKFINR-NRPIITDSGGFQVFSLAHGSVFDELNMKSR----------GNKHKSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGVDPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHL----PVEKPNHLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLLTKEGPVYIRKQVHKEDLR-PLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGLMARIRGKIMNNEL 464
            PP+   FPS  YE +DFF FELL++SKK  S ARVGR+HTPHG+++TPG+VAVATN ALK VD    ++  Q+L FCNTYHLLLQPG +V++  GGLH FINR N P+ITDSGGFQVFSLA+GSV +EL+              G+ ++S +   +K+TEEG +FRSYRDGRK  LTPES+VQAQK++G+DIIIPLDEL PYHIDP  L   V R+HRWEARSL EHL DVK+QAMY VIHGG+D  LR+ S EYLTSLPFDG+A+GG+LGKD  EL+E+L+  MP L       KP HLLGIADEPSI      G+DT DSC+PTR++RHGTLL++EG V+I+   +      P++  C+C TC+++ R YL HL++A EP+   L TIHN+QYMN LM   R  I+  ++
Sbjct:    9 PPTPNTFPSWAYEPRDFFEFELLYESKK--SLARVGRIHTPHGVIDTPGYVAVATNAALKGVDFRSADKTSQQLIFCNTYHLLLQPGTEVVEGAGGLHAFINRPNGPLITDSGGFQVFSLAYGSVHEELSTGGELKRASTKGKGGSNNQSGSQPAVKVTEEGVVFRSYRDGRKFPLTPESTVQAQKSFGADIIIPLDELPPYHIDPQVLRNSVERTHRWEARSLKEHLNDVKEQAMYCVIHGGLDRDLRRKSVEYLTSLPFDGYAIGGSLGKDSGELMELLEWMMPFLGNVDRRSKPRHLLGIADEPSILGAVKNGIDTMDSCYPTRLSRHGTLLSREGKVHIKSGRYSRQFGVPIDPQCQCSTCQQYDRPYLWHLFKAKEPVFMQLATIHNLQYMNDLMKEQRKLILEGKI 418          
BLAST of NO04G01050 vs. NCBI_GenBank
Match: XP_008880281.1 (queuine tRNA-ribosyltransferase [Aphanomyces invadans] >ETV91084.1 queuine tRNA-ribosyltransferase [Aphanomyces invadans])

HSP 1 Score: 477.6 bits (1228), Expect = 4.300e-131
Identity = 229/392 (58.42%), Postives = 291/392 (74.23%), Query Frame = 0
Query:   77 PSYERKDFFRFELLHQSKKEGSRARVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLLLQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDELNMKSRGN---KHKSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGVDPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHLPVEKPNHLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLL--TKEGPVYIRKQVHKEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGLMARIRGKIMNNEL 464
            P Y  KDFFRFE++HQS K  S+ARVGR+HTPHG+++TPGFV V TN ALK V     + +G +L F N+YHLLLQPGP+VI+  GGLH F+NR+RPIITDSGGFQVFSLA+GSV +EL  KS  +   +  +  S+V+KITEEG +F+SYRDGR++ LTPESSVQ QKAYG+DIIIP DEL PYHI PD L   V+R+HRWEARSL+EHLK V QQAMY V+HGG+D  LR+ S EY++SLPFDG A+GG++GKDR E++++L    P LP EKP HLLGIADEPS+     LG+DTFDSCFPTR  RHGTL   ++ GP+++ +     D  P++  C C  C +HS  Y+HHL++A EP +  L T+HN+ YM  LM   R  I++N +
Sbjct:   18 PPYVAKDFFRFEIVHQSTK--SKARVGRIHTPHGVIDTPGFVPVGTNAALKGVTQAQADASGAQLMFANSYHLLLQPGPEVIRQHGGLHTFMNRSRPIITDSGGFQVFSLAYGSVHEELKGKSSTHSKYRAANPTSAVVKITEEGVVFKSYRDGRRISLTPESSVQIQKAYGADIIIPFDELPPYHITPDKLETSVMRTHRWEARSLHEHLKHVNQQAMYGVVHGGIDQRLRRMSAEYISSLPFDGHAIGGSMGKDRTEMMDLLTFLRPFLPDEKPIHLLGIADEPSLHQCVPLGIDTFDSCFPTRAGRHGTLFSASRGGPLHVVRGKFAGDKGPIDAECACPACTQHSVGYIHHLFKAKEPTAMMLATLHNLHYMVRLMTTFRQHILDNRI 407          
BLAST of NO04G01050 vs. NCBI_GenBank
Match: OGN64092.1 (tRNA-guanosine(34) transglycosylase [Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9])

HSP 1 Score: 477.6 bits (1228), Expect = 4.300e-131
Identity = 236/377 (62.60%), Postives = 284/377 (75.33%), Query Frame = 0
Query:   87 FELLHQSKKEGSRARVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLLLQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDELNMKSRGNKHKSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGVDPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHLPVEKPNHLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLLTKEGPVYIRKQVHKEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGLMARIRGKIMNNEL 464
            FE+LHQSKK  SRARVGR++TPHGI++TP FVAV TNG LKA+D+   +  G +L FCNTYHLLLQPGPDV++  GGLHKF+ R  PIITDSGGFQVFSLA+GSV DEL  KSRG   K +   V+KI+EEG LFRSYRDG  VLLTPE+S+QAQK+ G+DIIIPLDEL PYHI  D L   + R+HRWE RSL EHLK+   QAMYAVIHGGVDP LRK S E+LT+LPFDGFA+GG+LGK + E+VE+LK  MP +PVEKPNHLLGI D  S+     LG+DTFDS +PTR ARHG LLT+EG V   K  +     P+E GC C+TC+  S AYLHHL++A E  + TL ++HN+ +M  LM R R  I+ + L
Sbjct:    3 FEILHQSKK--SRARVGRIYTPHGIIDTPNFVAVGTNGTLKALDNQMVDSIGLQLMFCNTYHLLLQPGPDVVRRAGGLHKFMGRKMPIITDSGGFQVFSLAYGSVADEL--KSRG--AKKQGGHVMKISEEGVLFRSYRDGSPVLLTPETSIQAQKSLGADIIIPLDELPPYHIGLDKLKTSLERTHRWEKRSLEEHLKNRANQAMYAVIHGGVDPELRKKSAEFLTALPFDGFAIGGSLGKTKPEMVEMLKQLMPRVPVEKPNHLLGIGDLESLEQCIPLGIDTFDSSYPTRAARHGLLLTQEGGVKAEKAENANHFAPIERGCSCWTCKHFSLAYLHHLFKAREMTAYTLASVHNLHFMVELMQRYRNAILQDLL 373          
BLAST of NO04G01050 vs. NCBI_GenBank
Match: WP_013943034.1 (tRNA-guanine(34) transglycosylase [Simkania negevensis] >CCB88567.1 queuine tRNA-ribosyltransferase [Simkania negevensis Z])

HSP 1 Score: 477.2 bits (1227), Expect = 5.600e-131
Identity = 235/377 (62.33%), Postives = 288/377 (76.39%), Query Frame = 0
Query:   85 FRFELLHQSKKEGSRARVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLLLQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDELNMKSRGNKHKSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGVDPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHLPVEKPNHLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLLTKEGPVYIRKQVHKEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGLMARIRGKIMNN 462
            F FE+LHQSKK  SRARVGR+HTPHGI++TP FVAV TNG LKA+D++     G +L FCNTYHLLLQPG  VI+  GG+HKFINRN PIITDSGGFQVFSLA+G V DEL  KS+G K KSE  SVLKIT +G LFRSYRDG+KVLLTPE+SVQAQKA G+DIIIP DEL PYHI P AL R + R+H WE RSL EHLK+ + QAMYAV+HGGVD  LR+ SC++L  LPFDGFA+GG++GK +EE+V +L  T+P LP   PNHLLGIAD  S+ A   LG+DTFDS +PT+ ARHGTLLT EGP+ I + + K       +GC C+TC  ++ AYLHHL++A E    TL ++HN+ +M  LM++ + KI+N+
Sbjct:    4 FTFEILHQSKK--SRARVGRIHTPHGIIDTPNFVAVGTNGTLKALDNEMVKTIGLQLMFCNTYHLLLQPGTSVIREAGGIHKFINRNLPIITDSGGFQVFSLAYGGVADEL--KSKGTK-KSE-GSVLKITSDGVLFRSYRDGQKVLLTPETSVQAQKALGADIIIPFDELPPYHICPKALSRSLDRTHEWEKRSLEEHLKNPQGQAMYAVVHGGVDNKLREKSCKFLADLPFDGFAIGGSMGKTKEEMVTMLSATLPKLPETAPNHLLGIADLESLEACVPLGIDTFDSSYPTKAARHGTLLTHEGPLKITRGIFKNKFTSPVKGCSCYTCEHYTLAYLHHLFKAKEISGLTLASVHNLHFMVELMSQYKNKILND 374          
BLAST of NO04G01050 vs. NCBI_GenBank
Match: XP_002501792.1 (predicted protein [Micromonas commoda] >ACO63050.1 predicted protein [Micromonas commoda])

HSP 1 Score: 476.5 bits (1225), Expect = 9.500e-131
Identity = 242/390 (62.05%), Postives = 288/390 (73.85%), Query Frame = 0
Query:   76 FPSYERKDFFRFELLHQSKKEGSRARVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLLLQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDELNMKS-RGNKHKSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGVDPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHLPVEKPNHLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLLTK-EGPVYIRKQVHKEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGLMARIRGKIMNNEL 464
            FP YE +DFFR+EL+HQSKK  S ARVGR+HTPHG++ TPG+VAV TNGALKAV H     AG +L F NTYHLLLQPGPD++ + GGLH+FI R+ PIITDSGGFQVFSLAH    D   MKS R +KHK  A  ++++ E+G LF+SYRDG +V+LTPESSV+AQK+ G+DIIIPLDEL PYHID   L R V  SHRWEARSL  HL+DV+QQAMYAVIHGGVD  LR+ S EYLTSLPFDGFA+GG+LGKD  ELVE+L   MP LP ++PNHLLGI D  SI      GVDTFDS FPTR ARHGTLLT+  G + IR+  +     P    C C  CR H+ +YLHHL +A EP+  TL T HN+ YM  LM   R KI+++E+
Sbjct:   77 FPPYEPRDFFRYELIHQSKK--SAARVGRIHTPHGVIETPGYVAVGTNGALKAVPHQELAAAGLDLMFANTYHLLLQPGPDLVASAGGLHEFIGRDAPIITDSGGFQVFSLAHAGEKDGEEMKSRRPSKHKDAAGLLVRLDEDGVLFKSYRDGSRVVLTPESSVEAQKSLGADIIIPLDELPPYHIDRAVLERSVYLSHRWEARSLKAHLRDVRQQAMYAVIHGGVDRDLRRMSVEYLTSLPFDGFAIGGSLGKDTAELVELLGHLMPQLPKDRPNHLLGIGDVGSILGSIPHGVDTFDSTFPTRSARHGTLLTRTRGRLNIRRSENSTLHEPPCWECACRLCRHHTVSYLHHLDKAKEPMMWTLATEHNLHYMGWLMRTQREKILSDEV 464          
BLAST of NO04G01050 vs. NCBI_GenBank
Match: XP_009845718.1 (queuine tRNA-ribosyltransferase [Aphanomyces astaci] >ETV64799.1 queuine tRNA-ribosyltransferase [Aphanomyces astaci])

HSP 1 Score: 476.5 bits (1225), Expect = 9.500e-131
Identity = 231/403 (57.32%), Postives = 293/403 (72.70%), Query Frame = 0
Query:   67 MTLPPSAEIFPSYERKDFFRFELLHQSKKEGSRARVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLLLQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDEL-NMKSRGNKHKSEA---SSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGVDPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHLPVEKPNHLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLL--TKEGPVYIRKQVHKEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGLMARIRGKIMNNEL 464
            + LPP    FP Y  KDFFRFEL+HQS K  SRARVGR+HTPHG+++TPGFV V TN ALK V     + +G +L F N+YHLLLQPGPDVI+  GGLH F+ R+RPIITDSGGFQVFSLA+GSV +EL    S+ NK+++ A   SSV+KITE+G +F+SYRDGR++ LTPESSVQ QKAYG+DIIIP DEL PYHI P+ L   V+R+HRWEARSL+EHLK V  QAMY V+HGG D  LR+ S EY++SLPFDG A+GG++GKDR E++++L    P LP  KP HLLGIADE S+     LG+DTFDSC+PTR  RHG+L   ++ G ++I +     D  P++  C C  C +HS  Y+HHL++A EP +  L T+HN+ YM  LMA+ R  I +  +
Sbjct:    7 LPLPPPPSAFPPYAAKDFFRFELVHQSTK--SRARVGRIHTPHGVIDTPGFVPVGTNAALKGVTQAQSDASGAQLMFANSYHLLLQPGPDVIRDAGGLHSFMGRSRPIITDSGGFQVFSLAYGSVHEELKGNSSKQNKYRTTANPTSSVVKITEDGVIFKSYRDGRRISLTPESSVQIQKAYGADIIIPFDELPPYHIAPEKLEASVMRTHRWEARSLHEHLKQVNHQAMYGVVHGGTDQRLRQMSAEYISSLPFDGHAIGGSMGKDRAEMMDLLTFLRPLLPDAKPIHLLGIADERSLHECVPLGIDTFDSCYPTRAGRHGSLFSSSRGGTLHITRGKFANDKGPIDADCSCPACTQHSVGYIHHLFKAKEPTAMMLATLHNLHYMVRLMAKFRQGIFDGRI 407          
BLAST of NO04G01050 vs. NCBI_GenBank
Match: OJV08462.1 (tRNA-guanosine(34) transglycosylase [Chlamydiales bacterium 38-26])

HSP 1 Score: 475.7 bits (1223), Expect = 1.600e-130
Identity = 234/379 (61.74%), Postives = 285/379 (75.20%), Query Frame = 0
Query:   85 FRFELLHQSKKEGSRARVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLLLQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDELNMKSRGNKHKSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGVDPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHLPVEKPNHLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLLTKEGPVYIRKQVHKEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGLMARIRGKIMNNEL 464
            F FELLH+SKK  SRARVGR+HTPHGI+NTP FVAV TNG +KA+D+   ++ G +L FCNTYH+LLQPG  V+K  GGLH FINR  PIITDSGGFQVFSLA+GSV DEL  KSRG   K + +SV+KITEEG  FRSYRDG KV+LTPESS+QAQK  G+DIIIP DEL PYHI PDAL R + R+HRWE RSL+EHLK+ + QAMYAVIHGG+DP LRKASC+YLT LPF+GFA+GG++GK++EE+  +L  T+P LP EKPNHLLGI D  SI     LG+DTFDS +PTR ARHG L T +G + + K  +     P+E+ C C TC R + AYLHHL++A E    +L T HN+ +M  LM R R  I+ + +
Sbjct:    4 FYFELLHRSKK--SRARVGRIHTPHGIINTPNFVAVGTNGTIKALDNTLVHDIGLQLMFCNTYHMLLQPGTKVVKQAGGLHTFINRKLPIITDSGGFQVFSLAYGSVADEL--KSRGT--KKQTTSVVKITEEGVHFRSYRDGSKVMLTPESSIQAQKDLGADIIIPFDELPPYHIAPDALKRSLDRTHRWEKRSLDEHLKNPQGQAMYAVIHGGIDPELRKASCDYLTKLPFEGFAIGGSMGKNKEEMHTLLSYTLPLLPEEKPNHLLGIGDLASIDRSVPLGIDTFDSSYPTRAARHGVLFTAKGGLNVTKAENATKFEPIEKDCTCPTCSRFTLAYLHHLFKAREMTCMSLATAHNLYFMVQLMERYRNHILEDRI 376          
BLAST of NO04G01050 vs. NCBI_GenBank
Match: WP_032125769.1 (tRNA-guanine(34) transglycosylase [Candidatus Protochlamydia naegleriophila] >CUI17055.1 queuine tRNA-ribosyltransferase [Candidatus Protochlamydia naegleriophila])

HSP 1 Score: 469.5 bits (1207), Expect = 1.200e-128
Identity = 228/379 (60.16%), Postives = 287/379 (75.73%), Query Frame = 0
Query:   85 FRFELLHQSKKEGSRARVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLLLQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDELNMKSRGNKHKSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGVDPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHLPVEKPNHLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLLTKEGPVYIRKQVHKEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGLMARIRGKIMNNEL 464
            F FEL+H+SK+  SRARVGR+HTPHGI++TP FVAV TNG +KA+D+   ++ G +L FCNTYHLLLQPG + ++  GGLH+FI+R  PIITDSGGFQVFSLA+G V DEL  KSRG   K +   VLKITEEG LFRSYRDG KVLLTPESS++AQK  G+DIIIP DEL PYHI P+AL + + R+HRWE RSL  HLK+ +QQAMYAVIHGGVDP LR+ASC +LT LPFDGFA+GG++GK ++E+  +L  T+P LP EKPNHLLGI D PSI     LG+DTFDS +PTR ARHG LLT +G + I K  + ++  P+E+ C C  C + + AY+HHL++A E  S +L TIHN+ +M  LM + R  IM +++
Sbjct:    4 FHFELIHRSKR--SRARVGRIHTPHGIIDTPNFVAVGTNGTVKALDNSMLHDIGLQLMFCNTYHLLLQPGTETVRQAGGLHQFIHRKLPIITDSGGFQVFSLAYGGVADEL--KSRGT--KKQGGCVLKITEEGVLFRSYRDGSKVLLTPESSIKAQKDLGADIIIPFDELPPYHIAPEALKKSLARTHRWEQRSLEAHLKNPQQQAMYAVIHGGVDPELRQASCSFLTGLPFDGFAIGGSMGKTKDEMHTLLSHTLPLLPQEKPNHLLGIGDLPSIDRSIPLGIDTFDSSYPTRAARHGILLTSQGGLNITKSEYAKNFSPIEKDCGCPACAKFTLAYIHHLFKARELTSMSLATIHNLYFMVQLMQKYREDIMEDKV 376          
BLAST of NO04G01050 vs. NCBI_GenBank
Match: WP_068467978.1 (tRNA-guanosine(34) transglycosylase [Parachlamydia sp. C2])

HSP 1 Score: 469.5 bits (1207), Expect = 1.200e-128
Identity = 229/379 (60.42%), Postives = 285/379 (75.20%), Query Frame = 0
Query:   85 FRFELLHQSKKEGSRARVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLLLQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDELNMKSRGNKHKSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIIIPLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGVDPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHLPVEKPNHLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLLTKEGPVYIRKQVHKEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGLMARIRGKIMNNEL 464
            FRFELLH+SKK  SRARVGR+HTPHGI++TP FVAV TNG +KA+D+   ++ G +L FCNTYHLLLQPG +V+K  GGLH+FINR  PIITDSGGFQVFSLA+GSV DEL  KSRG   K +  SV+KITEEG LFRSYRDG KVLLTPE+SVQAQK  G+DIIIP DEL PYHI  ++L + + R+HRWE RSL  HLK+ + QAMYAVIHGG++P LR+ SC +LT L FDGFA+GG++GK++EE+  +L  T+P LP EKPNHLLGI D  SI     LG+DTFDS +PTR ARHG L T +G + + K  +  +  P+E+ C C TC + +RAYLHHL++A E    +L T HN+ YM  LM R R +I+ + +
Sbjct:    4 FRFELLHRSKK--SRARVGRIHTPHGIIDTPNFVAVGTNGTVKALDNSILHDIGLQLMFCNTYHLLLQPGTEVVKQAGGLHQFINRKLPIITDSGGFQVFSLAYGSVADEL--KSRGT--KKQGGSVIKITEEGVLFRSYRDGAKVLLTPETSVQAQKDLGADIIIPFDELPPYHISHESLKKSLARTHRWEKRSLETHLKNPQGQAMYAVIHGGINPELRQESCSFLTKLDFDGFAIGGSMGKNKEEMHTLLSFTLPLLPEEKPNHLLGIGDLASIERSVPLGIDTFDSSYPTRAARHGILFTAQGNLNVTKAENSREFTPIEKDCTCPTCTKFTRAYLHHLFKANELTGMSLATAHNLHYMIQLMQRYRNQILEDHV 376          
The following BLAST results are available for this feature:
BLAST of NO04G01050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EKD48729.11.500e-13161.48hypothetical protein ACD_64C00164G0004 [uncultured... [more]
XP_002293243.11.900e-13158.01queuine tRNA ribosyltransferase, partial [Thalassi... [more]
XP_008880281.14.300e-13158.42queuine tRNA-ribosyltransferase [Aphanomyces invad... [more]
OGN64092.14.300e-13162.60tRNA-guanosine(34) transglycosylase [Chlamydiae ba... [more]
WP_013943034.15.600e-13162.33tRNA-guanine(34) transglycosylase [Simkania negeve... [more]
XP_002501792.19.500e-13162.05predicted protein [Micromonas commoda] >ACO63050.1... [more]
XP_009845718.19.500e-13157.32queuine tRNA-ribosyltransferase [Aphanomyces astac... [more]
OJV08462.11.600e-13061.74tRNA-guanosine(34) transglycosylase [Chlamydiales ... [more]
WP_032125769.11.200e-12860.16tRNA-guanine(34) transglycosylase [Candidatus Prot... [more]
WP_068467978.11.200e-12860.42tRNA-guanosine(34) transglycosylase [Parachlamydia... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL079nonsL079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR109ngnoR109Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009713NSK009713Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G01050.1NO04G01050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|578306gene_1885Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100131g5gene2072Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G01050.1NO04G01050.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G01050 ID=NO04G01050|Name=NO04G01050|organism=Nannochloropsis oceanica|type=gene|length=1392bp
ATGAGGCCTGCTGCTGCATGCGCTCCTCTCCTAGCCGTACGTCGACCTAT
TGCTGCGCAAAGCAGCCTGCCTCTTGCCTCGGCCTCAGCCTGCTGCTGTA
CAACGACTAGCACCACAACCACACCCCATCCCCCTGACCAACCCCCCCTG
GCCCTTCCCAAGAAAAAGGAGAAGAAACGCAAGGTCAAATTCGACCCCAT
GACCCTGCCTCCTTCCGCTGAGATCTTTCCGTCCTACGAGCGCAAGGACT
TCTTCCGCTTTGAGCTGCTGCATCAATCCAAGAAAGAAGGGTCCCGGGCC
CGAGTAGGGAGACTCCATACCCCTCACGGCATCGTCAATACGCCTGGCTT
CGTCGCCGTCGCCACCAACGGCGCGCTCAAAGCTGTCGATCACGACTGGG
GTAATGAGGCAGGACAAGAGCTCACTTTCTGCAACACTTACCACCTCCTC
CTCCAGCCGGGGCCCGATGTAATCAAGGCCTGTGGTGGCCTCCACAAATT
TATCAACCGTAATCGTCCCATCATCACTGACAGCGGCGGCTTTCAAGTCT
TCTCCCTCGCCCATGGTTCAGTTTTTGACGAGCTTAACATGAAATCTCGG
GGCAATAAACACAAGTCTGAGGCCTCGTCCGTCCTCAAAATTACTGAGGA
GGGCTGCCTCTTCCGCTCCTACCGCGACGGCCGGAAAGTCCTCCTCACAC
CGGAATCATCCGTTCAAGCGCAAAAAGCCTACGGATCTGACATCATTATC
CCTCTCGACGAACTACACCCCTATCATATTGACCCCGATGCCTTGCTCCG
GTGCGTCTTACGCTCGCACAGGTGGGAAGCGCGTTCCCTAAACGAACACC
TGAAAGATGTGAAACAACAGGCCATGTATGCCGTCATTCATGGAGGGGTT
GACCCTGCTTTGCGAAAAGCCAGCTGTGAGTATCTCACTTCGTTGCCATT
TGATGGTTTTGCGGTGGGGGGAGCGTTGGGGAAGGACAGGGAGGAGCTGG
TTGAAGTTTTGAAGGTGACGATGCCGCACCTGCCCGTGGAGAAGCCCAAT
CATTTGCTAGGCATTGCAGATGAGCCGTCGATCTGGGCGGGGTCAGCGTT
GGGGGTGGACACATTTGATTCGTGTTTCCCCACGCGGATCGCGAGGCATG
GTACCCTGTTGACGAAGGAGGGACCTGTGTACATTCGAAAGCAGGTGCAC
AAGGAGGACTTGCGGCCGTTGGAGGAGGGATGCGAATGCTTTACCTGCCG
GAGGCACAGCCGAGCATACCTGCATCATTTGTACCGGGCATGCGAGCCGT
TGAGTGCCACATTGTTGACGATTCATAATATGCAGTACATGAATGGGCTG
ATGGCGCGAATACGGGGAAAGATAATGAACAATGAGCTATAG
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protein sequence of NO04G01050.1

>NO04G01050.1-protein ID=NO04G01050.1-protein|Name=NO04G01050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=464bp
MRPAAACAPLLAVRRPIAAQSSLPLASASACCCTTTSTTTTPHPPDQPPL
ALPKKKEKKRKVKFDPMTLPPSAEIFPSYERKDFFRFELLHQSKKEGSRA
RVGRLHTPHGIVNTPGFVAVATNGALKAVDHDWGNEAGQELTFCNTYHLL
LQPGPDVIKACGGLHKFINRNRPIITDSGGFQVFSLAHGSVFDELNMKSR
GNKHKSEASSVLKITEEGCLFRSYRDGRKVLLTPESSVQAQKAYGSDIII
PLDELHPYHIDPDALLRCVLRSHRWEARSLNEHLKDVKQQAMYAVIHGGV
DPALRKASCEYLTSLPFDGFAVGGALGKDREELVEVLKVTMPHLPVEKPN
HLLGIADEPSIWAGSALGVDTFDSCFPTRIARHGTLLTKEGPVYIRKQVH
KEDLRPLEEGCECFTCRRHSRAYLHHLYRACEPLSATLLTIHNMQYMNGL
MARIRGKIMNNEL*
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Synonyms
Publications