NO04G00840, NO04G00840 (gene) Nannochloropsis oceanica

Overview
NameNO04G00840
Unique NameNO04G00840
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1259
Alignment locationchr4:279297..280555 -

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Properties
Property NameValue
DescriptionLow PSII Accumulation 3
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:279297..280555 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR018962DUF1995
Homology
BLAST of NO04G00840 vs. NCBI_GenBank
Match: EWM28471.1 (protein of unknown function DUF1995 [Nannochloropsis gaditana])

HSP 1 Score: 603.2 bits (1554), Expect = 5.500e-169
Identity = 307/377 (81.43%), Postives = 339/377 (89.92%), Query Frame = 0
Query:    1 MRSTRSTTAFL-ALLVASSTNAFVPPSHPAATLAARSANLPATAATIMHATTVPRRVGLEAIPDADLKEADKTPPPSTFFECTLQAYNSAAAAIKDGYKLLEVEFPPLPAAEMASQASSANSIGSANINLATDVAKYFVREGKQVVILVPDKDELDLIEEGMGTLSPAPNVTIRAVRARNSESAETMGELLLGIFSRAAKGRVLPWYNADIYISVITSGQELPDLEALHAADPDKPMIFFNLNLETHRGDLGLPAFPSKDLHYRFLSQIKPAYLLRTRQYAQTLSRPPFILNYQGALFRTYPGGYQCMLDTGNGRYRRVETSKNRPALNGFKEIITEALDVDDNETLAALRKGAFSKGTWWEKEENQVKEVSDNWRT 377
            MR T S+ A L +LL++ ST  F+ P +P+ +      +   ++   + ATTVPR VGLEAIP+ADLK ADKT PPSTFFECTLQAYN+AAAAIKDGYKLLEVEFPPLPAAEMASQASSANSIGSANINLA ++A+YFVREGKQVVILVPDKDELDLIEEG+GTLSP+PNVTIRAVRARNSESA+TMGEL+LGIFSRAAKG+VLPWYNADIYISVI+SGQELPDLEALH ADP KP+IFFNLNLETHRGDLGLPAFPSKDLHYRFLS IKP YLLRTRQYAQTLSRPPFILNYQGALFRTYPGGYQCMLDTGNGRYRRVETS+ RPAL+GFK+IIT+ALDV+DN+TLA+LR+GAFSK TWWEKEE   KE SDNWRT
Sbjct:    1 MRHTWSSIACLFSLLISQSTIGFLLP-YPSGSFPMARPHSTLSSQVALFATTVPRAVGLEAIPEADLKAADKTAPPSTFFECTLQAYNAAAAAIKDGYKLLEVEFPPLPAAEMASQASSANSIGSANINLANEMAQYFVREGKQVVILVPDKDELDLIEEGLGTLSPSPNVTIRAVRARNSESADTMGELILGIFSRAAKGKVLPWYNADIYISVISSGQELPDLEALHQADPTKPLIFFNLNLETHRGDLGLPAFPSKDLHYRFLSNIKPVYLLRTRQYAQTLSRPPFILNYQGALFRTYPGGYQCMLDTGNGRYRRVETSRERPALSGFKDIITQALDVEDNDTLASLRRGAFSK-TWWEKEEGWAKESSDNWRT 375          
BLAST of NO04G00840 vs. NCBI_GenBank
Match: XP_005854743.1 (hypothetical protein NGA_0177102 [Nannochloropsis gaditana CCMP526] >EKU21614.1 hypothetical protein NGA_0177102 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 602.4 bits (1552), Expect = 9.400e-169
Identity = 307/377 (81.43%), Postives = 339/377 (89.92%), Query Frame = 0
Query:    1 MRSTRSTTAFL-ALLVASSTNAFVPPSHPAATLAARSANLPATAATIMHATTVPRRVGLEAIPDADLKEADKTPPPSTFFECTLQAYNSAAAAIKDGYKLLEVEFPPLPAAEMASQASSANSIGSANINLATDVAKYFVREGKQVVILVPDKDELDLIEEGMGTLSPAPNVTIRAVRARNSESAETMGELLLGIFSRAAKGRVLPWYNADIYISVITSGQELPDLEALHAADPDKPMIFFNLNLETHRGDLGLPAFPSKDLHYRFLSQIKPAYLLRTRQYAQTLSRPPFILNYQGALFRTYPGGYQCMLDTGNGRYRRVETSKNRPALNGFKEIITEALDVDDNETLAALRKGAFSKGTWWEKEENQVKEVSDNWRT 377
            MR T S+ A L +LL++ ST  F+ P +P+ +      +   ++   + ATTVPR VGLEAIP+ADLK ADKT PPSTFFECTLQAYN+AAAAIKDGYKLLEVEFPPLPAAEMASQASSANSIGSANINLA ++A+YFVREGKQVVILVPDKDELDLIEEG+GTLSP+PNVTIRAVRARNSESA+TMGEL+LGIFSRAAKG+VLPWYNADIYISVI+SGQELPDLEALH ADP KP+IFFNLNLETHRGDLGLPAFPSKDLHYRFLS IKP YLLRTRQYAQTLSRPPFILNYQGALFRTYPGGYQCMLDTGNGRYRRVETS+ RPAL+GFK+IIT+ALDV+DN+TLA+LR+GAFSK TWWEKEE   KE SDNWRT
Sbjct:    1 MRHTWSSIACLFSLLMSQSTIGFLLP-YPSGSFPMARPHSTLSSQVALFATTVPRAVGLEAIPEADLKAADKTAPPSTFFECTLQAYNAAAAAIKDGYKLLEVEFPPLPAAEMASQASSANSIGSANINLANEMAQYFVREGKQVVILVPDKDELDLIEEGLGTLSPSPNVTIRAVRARNSESADTMGELILGIFSRAAKGKVLPWYNADIYISVISSGQELPDLEALHQADPTKPLIFFNLNLETHRGDLGLPAFPSKDLHYRFLSNIKPVYLLRTRQYAQTLSRPPFILNYQGALFRTYPGGYQCMLDTGNGRYRRVETSRERPALSGFKDIITQALDVEDNDTLASLRRGAFSK-TWWEKEEGWAKESSDNWRT 375          
BLAST of NO04G00840 vs. NCBI_GenBank
Match: CBN76619.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 280.8 bits (717), Expect = 6.200e-72
Identity = 148/307 (48.21%), Postives = 196/307 (63.84%), Query Frame = 0
Query:   73 PPPSTFFECTLQAYNSAAAAIKDGYKLLEVEFPPLPAAEMASQASSANSIGSANINLATDVAKYFVREGKQVVILVPDKDELDLIEEGMGTLSPAPNVTIRAVRARNSESAETMGELLLGIFSRAAKGRVLPWYNADIYISVITSGQELPDLEALHAADPDKPMIFFNLNLETHRGDLGLPAFPSKDLHYRFLSQIKPAYLLRTRQYAQTLSRPPFILNYQGALFRTYPGGYQCMLDTGNGRYRRVETSKNRPALNGFKEIITEALDVD---DNETLAALRKGAFSKGTWWEKEENQVKEVSDNWRT 377
            P PSTF +C  QA  +   A +DG+ L+EVEFPPL    +    SSA  + SAN+ LA+  A+ F  EGK+V IL+PD+ ELD   +  G +  +  VT+R +R+    +A T+  L +    R   G + P    DIY++++ S QELPDL+ L+   PD  ++FFNL L+T RGDLGLPAFP K LHY FLSQIKP YLLRTR Y++T+S+ PF++NYQGA FR YPG YQC+LD G+ RY+RV  S  R +L  FK+ IT+AL +D   DN   +  RKG F   TWW  EE   +E S NWR+
Sbjct:   21 PAPSTFEQCIRQAQGAVEDAFEDGFNLVEVEFPPLQQDYLEDSGSSAYDVSSANVRLASRFAQSFAAEGKEVSILLPDEAELDQAADDEGGVEISKGVTLRTLRSSGKRTAATLDALFMSFVGRGT-GVIEPIEGTDIYVALVFSCQELPDLQELNKLVPDAKIVFFNLRLDTLRGDLGLPAFPPKSLHYDFLSQIKPVYLLRTRAYSRTISKKPFLVNYQGAQFRVYPGEYQCLLDVGS-RYKRVSNSPKRQSLGDFKDEITKALKLDEEEDNAVTSFFRKG-FKNKTWW--EEGGEEEKSTNWRS 322          
BLAST of NO04G00840 vs. NCBI_GenBank
Match: GAX19383.1 (hypothetical protein FisN_4Lh362 [Fistulifera solaris])

HSP 1 Score: 279.3 bits (713), Expect = 1.800e-71
Identity = 148/322 (45.96%), Postives = 201/322 (62.42%), Query Frame = 0
Query:   69 ADKTPPPSTFFECTLQAYNSAAAAIKDGYKLLEVEFPPLPAAEMASQASSANSIGSANINLATDVAKYFVREGK-------QVVILVPDKDELDLIEEGMGTLSPAPNVTIRAVRARNSESAETM--GELLLGIFSRAAKGRVLPWYNADIYISVITSGQELPDLEALHAADPDKPMIFFNLNLETHRGDLGLPAFPSKDLHYRFLSQIKPAYLLRTRQYAQTLSRPPFILNYQGALFRTYPGGYQCMLDTGNGRYRRVETSKNRPALNGFKEIITEALD-----VDDNETLAALRKGAFSKGTWWEKEENQVKEVSDNWRT 377
            + K  PPS+FFE    +  +   A+KDG+KLLE+EFPPLPA+ +     SA  +  AN+NLA + +K  +   K       ++ I++PD+ ELD+I+E +GT  P P VTI ++R  + +        +LLL +F   + G V     AD+YI +I S QELPD+E LH  DP KP++ +N+ L+  RGDLG PAFP KDLH RFLS+IKP Y LRTRQY+++   PPF++NYQG LFRTYPG YQ +LDTG GRYRR+  +K RP+L  FKE +T+ L       D+   L  LR G +   TWWE++  Q    SD W T
Sbjct:   52 SSKLSPPSSFFELQQDSIRATRLALKDGHKLLEIEFPPLPASVLEMDDVSAYDVAEANVNLALEFSKGLLTATKDSETQLRKIAIMLPDEAELDIIKEKIGTTDPYPGVTISSLRKSDPDDTRIFKPEQLLLSLFGN-SPGTVTGVDEADMYICLIASAQELPDIEELHGLDPQKPVVCYNMKLDILRGDLGAPAFPGKDLHDRFLSRIKPVYYLRTRQYSRSTPNPPFMVNYQGCLFRTYPGEYQTLLDTGTGRYRRIVGNKIRPSLGTFKEQLTDELKKQGVVQDEGSALEWLRTG-YKTTTWWEEDREQ---ASDAWVT 368          
BLAST of NO04G00840 vs. NCBI_GenBank
Match: GAX28447.1 (hypothetical protein FisN_4Hh362 [Fistulifera solaris])

HSP 1 Score: 274.6 bits (701), Expect = 4.500e-70
Identity = 153/353 (43.34%), Postives = 214/353 (60.62%), Query Frame = 0
Query:   48 HATTVPRRVGLEAI----PDADLKEAD------KTPPPSTFFECTLQAYNSAAAAIKDGYKLLEVEFPPLPAAEMASQASSANSIGSANINLATDVAKYFV-------REGKQVVILVPDKDELDLIEEGMGTLSPAPNVTIRAVRARNSESAETM--GELLLGIFSRAAKGRVLPWYNADIYISVITSGQELPDLEALHAADPDKPMIFFNLNLETHRGDLGLPAFPSKDLHYRFLSQIKPAYLLRTRQYAQTLSRPPFILNYQGALFRTYPGGYQCMLDTGNGRYRRVETSKNRPALNGFKEIITEALD-----VDDNETLAALRKGAFSKGTWWEKEENQVKEVSDNWRT 377
            HA+T  RR+    +    P ++   A+      K  PPS+FFE    +  +   A+KDG+KLLE+EFPPLPA+ +     SA  +  AN+NLA + +K  +        + K++ I++PD+ ELD+I++ + T  P P VTI ++R  + +        +LLL +F   + G V    +AD+YI +I S QELPD+E LH  DP KP++ +N+ L+  RGDLG PAFP KDLH RFLS+IKP Y LRTRQY+++   PPF++NYQG LFRTYPG YQ +LDTG GRYRR+  +K RP+L  FKE +T+ L       D+   L  LR G +   TWWE++  Q    SD W T
Sbjct:   21 HASTPARRLQRTCVYNIPPPSEESVAEFTEYSSKLSPPSSFFELQQDSIRATRLALKDGHKLLEIEFPPLPASVLEMDDVSAYDVAEANVNLALEFSKGLLTATKDSDTQLKKIAIMLPDEAELDIIKDKIVTTDPYPGVTISSLRKSDPDDTRIFKPEQLLLSLFGN-SPGTVTGVDDADMYICLIASAQELPDIEELHGLDPQKPVVCYNMKLDILRGDLGAPAFPGKDLHDRFLSRIKPVYYLRTRQYSRSTPNPPFMVNYQGCLFRTYPGEYQTLLDTGTGRYRRILGNKIRPSLGTFKEQLTDELKKQGVVQDEGSALEWLRTG-YKTTTWWEEDREQ---ASDAWVT 368          
BLAST of NO04G00840 vs. NCBI_GenBank
Match: XP_009041820.1 (hypothetical protein AURANDRAFT_34008 [Aureococcus anophagefferens] >EGB03491.1 hypothetical protein AURANDRAFT_34008 [Aureococcus anophagefferens])

HSP 1 Score: 262.3 bits (669), Expect = 2.300e-66
Identity = 140/301 (46.51%), Postives = 192/301 (63.79%), Query Frame = 0
Query:   80 ECTLQAYNSAAAAIKDGYKLLEVEFPPLPAAEMASQASS--ANSIGSANINLATDVAKYFV-REGKQVVILVPDKDELDLIEEGMGTLSPAPNVTIRAVRARNSESAETMGELLLGIFSRAAKG-RVLPWYNADIYISVITSGQELPDLEALHAADP-DKPMIFFNLNLETHRGDLGLPAFPSKDLHYRFLSQIKPAYLLRTRQYAQTLSRPPFILNYQGALFRTYPGGYQCMLDTGNGRYRRVETSKNRPALNGFKEIITEALDVDDNETLAALRKGAFSKGTWWEKEENQVKEVSDNWR 376
            +C  QA  +A  A+ DG  ++EVEFPPLPA   A++  S     + +AN  LA   A  F  R GK+V I+ PD  EL+   E  GT  PAP V + ++R   +E AE++ +  LG F +  K  + LP  +AD+Y+ +  S QELPD+E L   +   KP+I FNL L+T RGDLGLPAFP KDL +RFLS++KP Y LRTRQY+ +L +PPF++NYQGA+FR YPG YQC+LDTG   YR V+ S  RPAL  FK+I+T+AL + +N   A   +  +   TWWE E+ + +E+ + WR
Sbjct:    3 QCLAQAQGAAIQAVDDGDVIMEVEFPPLPADTRAAKGCSDLGRDVSAANTKLAVKFAAAFAERRGKRVAIMYPDTAELERAVEDSGTDEPAPGVKLHSLRKPFNE-AESLDQAFLGFFGKGKKNIKALP-DDADVYVCLTFSAQELPDVEYLCELESFGKPVILFNLKLDTQRGDLGLPAFPPKDLQWRFLSRVKPVYYLRTRQYSLSLPQPPFVVNYQGAIFRCYPGKYQCLLDTGK-TYRAVDVSARRPALGEFKDILTDALKIGENNKAARFARSGYKSITWWE-EDKKSEELHETWR 299          
BLAST of NO04G00840 vs. NCBI_GenBank
Match: XP_002292029.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90880.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 258.8 bits (660), Expect = 2.500e-65
Identity = 141/336 (41.96%), Postives = 199/336 (59.23%), Query Frame = 0
Query:   60 AIPDADLKEADKTPPPSTFFECTLQAYNSAAAAIKDGYKLLEVEFPPLPAAEMASQASSANSIGSANINLATDVAKYFVREGKQVVILVPDKDELDLIEEGMGT-LSPAPNVTIRAVRARNSESAETM----GELLLGIFSRAAKGRVLPWYNADIYISVITSGQELPDLEALH-------AADPDKPMIFFNLNLETHRGDLGLPAFPSKDLHYRFLSQIKPAYLLRTRQYAQTLSRPPFILNYQGALFRTYPGGYQCMLDTGNGRYRRVETSKNRPALNGFKEIITEAL-------DVDDNETLAALRKGAFSKGTWWEKEENQVKEVSDNWRT 377
            A P+     ADK  PPS+F+E    +  +A  AI DGY+LLEVEFPPLPA  +     SA  +  AN+NLA D AK F   G QV I++PD+ E +++ E +     P P VT+ ++  R SE  +T       LL+G+  R + G V P    ++YI ++ S QELPD+E L+         +    ++F+NL L+  RGDLG PAFP KD   RFLS++KP Y LRTRQY+++ ++PPFILN+QG +FR+YPG YQ +LDTG GRYR+V  +  RPAL  FKE + + L         ++  +L    +  +   TWWE+E    ++ S +WRT
Sbjct:   12 ATPEEIKSAADKEAPPSSFYELQRASVRAAQNAIGDGYRLLEVEFPPLPANVLEMDDVSAYDVAKANVNLALDFAKSFASTGSQVAIMLPDESECNIMLEDLKVGDKPYPGVTLTSL--RRSEEGDTRVFEPENLLIGLMGRGSGGTVKPIEGTNMYIVIVASAQELPDVEELYDQIKDTKEGEEQPVIVFYNLKLDVLRGDLGAPAFPGKDFQDRFLSRVKPVYYLRTRQYSRSTNKPPFILNFQGCIFRSYPGHYQTLLDTGTGRYRKVVGNNIRPALGEFKEQLVDCLREEGAIPTKEEEGSLFGFLRTGYKVTTWWEEER---EDASMDWRT 342          
BLAST of NO04G00840 vs. NCBI_GenBank
Match: XP_002186506.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65976.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 257.7 bits (657), Expect = 5.700e-65
Identity = 159/390 (40.77%), Postives = 219/390 (56.15%), Query Frame = 0
Query:    9 AFLALLVASSTNAFVPPSHPAATLAARSANLPATAATIMHATTVPRRVGLEAIPD------ADLKE-ADKTPPPSTFFECTLQAYNSAAAAIKDGYKLLEVEFPPLPAAEMASQASSANSIGSANINLATDVAKYFV---REG---KQVVILVPDKDELDLIEEGMGTLSPAPNVTIRAVRARNSESAETM----GELLLGIFSRAAKGRVLPWYNADIYISVITSGQELPDLEALHAADPDKPMIFFNLNLETHRGDLGLPAFPSKDLHYRFLSQIKPAYLLRTRQYAQTLSRPPFILNYQGALFRTYPGGYQCMLDTGNGRYRRVETSKNRPALNGFKEIITEALDV-----DDNETLAALRKGAFSKGTWWEKEENQVKEVSDNWRT 377
            A+L++L  + TNA+ P           S  +P        A T+     L  +P        + K+ A K PPPS+FFE       +   A KDG+KLLEVEFPPLPAA +     SA  +  AN+ LA D +K  +   R+G   K++ +L PD+ E D   E  G+++P P V I ++   +SE  +       ++ L +  +  +G V P  + D+YI +  S QELPD+EALH  +PDK ++FFNL L+  RGD G PAFP K+   RFLS++KP Y LRTRQY ++  +PPF++N+QG LFR YPG YQ +LDTG GRYRR+  S  RPAL  FKE +T+ L       D+  TL+ LR G +   TWWE+E     E S  W T
Sbjct:   11 AWLSMLSINLTNAWTP-----------SRGMP---MKFSQANTISSPTQLWNVPPPSENSVVEFKQYASKLPPPSSFFELQQDCQRAVRLARKDGHKLLEVEFPPLPAAVLEMDDVSAYDVVQANLKLALDFSKGLLAGERDGSSLKKIALLFPDQAEADFAVEKAGSINPYPGVVISSL--LSSEGIDDRYFKPEQIFLNLLGK-REGSVKPVPDTDLYIILTASAQELPDVEALHKQEPDKTIVFFNLKLDVLRGDFGAPAFPKKEFQDRFLSRVKPVYYLRTRQYTRSTPKPPFMVNFQGCLFRAYPGQYQTLLDTGTGRYRRLVGSDIRPALGAFKEQLTDDLKSQGILDDEGSTLSFLRTG-YKTTTWWEEER---PEASQEWLT 379          
BLAST of NO04G00840 vs. NCBI_GenBank
Match: XP_005713581.1 (unnamed protein product [Chondrus crispus] >CDF33762.1 unnamed protein product [Chondrus crispus])

HSP 1 Score: 248.4 bits (633), Expect = 3.400e-62
Identity = 154/389 (39.59%), Postives = 211/389 (54.24%), Query Frame = 0
Query:   21 AFVPPSHPAATLAARSANLPATAATIMHATTVPRRVGL--------------EAIPDADLKEADK-----TPPPSTFFECTLQAYNSAAAAIKDGYKLLEVEFPPLPAAEMASQASSANSIGSANINLATDVAKYFVREGKQVVILVPDKDELDLIEEGMGTLSPAPNVTIRAVRARNSESAETMGELLLGIFSRAAKGRVLP--W----------YNADIYISVITSGQELPDLEALHAADPDKPMIFFNLNLETHRGDLGLPAFPSKDLHYRFLSQIKPAYLLRTRQYAQTLSRPPFILNYQGALFRTYPGGYQCMLDTGNGRYRRVETSKNRPALNGFKEIITEALDVD--DNETLAALRKGAFSKGTWWEKEENQVKEVSDNWRT 377
            AFV P  P  TL           +T +H  T P R  L               A  + D K+A       TPPPSTF++   QA  +  AA+ DG+KLLEVEFPPLP A++ S A  A  +  AN+ LA D AK + REG +V I  PD  E D                 RAV  +N+ES E +  +  G    A KG +L   W           + D ++ +  S QELPD+E L A   D+P++ FNL L+T RGDLGLPAFP KDLHYRFLS++ P Y LRTR Y+++++R P+I+NY GAL++ YPG YQ +LDT  G Y+R+   + RP L   ++I+T+ L +D    +  + L KG +   TWWE++    K +S+ WR+
Sbjct:    2 AFVSPV-PLPTLLGN-----VKTSTCLHKRTTPLRNQLFQRSYVRISRSPRATATNETDAKQAKSKDLALTPPPSTFYQAITQAQGAVDAALADGHKLLEVEFPPLPTADLESAAVGAYDVSDANVRLAVDFAKKYAREGTRVSICFPDLVEKD-----------------RAVE-QNNESEEPINGIRFGSLRDARKGSILERIWTKPELDIAVREDDDFFVVLGASCQELPDVEKLVALAGDRPVVLFNLKLDTSRGDLGLPAFPRKDLHYRFLSKVLPVYYLRTRTYSRSMNRAPYIVNYSGALYKVYPGAYQVLLDTKEGNYKRLTVLEERPPLGRVRDILTDGLSIDGVKGKDGSMLYKG-YKSETWWERDRE--KALSNKWRS 363          
BLAST of NO04G00840 vs. NCBI_GenBank
Match: EJK61207.1 (hypothetical protein THAOC_18346, partial [Thalassiosira oceanica])

HSP 1 Score: 245.0 bits (624), Expect = 3.800e-61
Identity = 139/338 (41.12%), Postives = 198/338 (58.58%), Query Frame = 0
Query:   60 AIPDADLKEADKTPPPSTFFECTLQAYNSAAAAIKDGYKLLEVEFPPLPAAEMASQASSANSIGSANINLATDVAKYFVREG--KQVVILVPDKDELDLIEEGMGTLS-PAPNVTIRAVRARNSESAETM---GELLLGIFSRAAKGRVLPWYNADIYISVITSGQELPDLEALHAADPDKP---------MIFFNLNLETHRGDLGLPAFPSKDLHYRFLSQIKPAYLLRTRQYAQTLSRPPFILNYQGALFRTYPGGYQCMLDTGNGRYRRVETSKNRPALNGFKEIITEAL-------DVDDNETLAALRKGAFSKGTWWEKEENQVKEVSDNWR 376
            A P    + AD   PP++FF+    +  +A  A+ DG+ LLEVEFPPLPA  +     SA  +  AN+NLA D AK F   G    V IL+PD+ E  ++ E +   S P P VT+ ++R R+ E  + +     +L+G+  R + G V P  +  +YI +  S QELPD+E L+    D+          ++F+NL L+  RGDLG PAFPSK+   RFLS++KP Y LRTRQY++++S+PPFILN+QG +FR+YPG YQ +LDTG GRYR+V  +  RPAL  FKE +T+AL         ++   L    +  +   TWWE+E    +  S +WR
Sbjct:    2 ASPQEIKEAADAAAPPASFFDLQQASVKAAQMAMDDGFGLLEVEFPPLPANVLEMDDVSAYDVAKANVNLALDFAKAFATTGPKNNVAILLPDESECQIMREDLEMDSNPFPGVTLTSLR-RSEEGDDRVFKPENVLIGLLGRGSGGTVKPIEDTSMYIIIGASAQELPDVEELYEQIKDQKDEETGKSPVIVFYNLKLDILRGDLGAPAFPSKEFQDRFLSRVKPVYYLRTRQYSRSISQPPFILNFQGCIFRSYPGHYQTLLDTGTGRYRKVVGNDLRPALGEFKEQLTDALREEGAIAKKEEEGALFGFLRTGYKTTTWWEEER---ENASMDWR 335          
The following BLAST results are available for this feature:
BLAST of NO04G00840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM28471.15.500e-16981.43protein of unknown function DUF1995 [Nannochlorops... [more]
XP_005854743.19.400e-16981.43hypothetical protein NGA_0177102 [Nannochloropsis ... [more]
CBN76619.16.200e-7248.21conserved unknown protein [Ectocarpus siliculosus][more]
GAX19383.11.800e-7145.96hypothetical protein FisN_4Lh362 [Fistulifera sola... [more]
GAX28447.14.500e-7043.34hypothetical protein FisN_4Hh362 [Fistulifera sola... [more]
XP_009041820.12.300e-6646.51hypothetical protein AURANDRAFT_34008 [Aureococcus... [more]
XP_002292029.12.500e-6541.96predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_002186506.15.700e-6540.77predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_005713581.13.400e-6239.59unnamed protein product [Chondrus crispus] >CDF337... [more]
EJK61207.13.800e-6141.12hypothetical protein THAOC_18346, partial [Thalass... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL074nonsL074Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR105ngnoR105Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005019NSK005019Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G00840.1NO04G00840.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|524663gene_1862Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100190g10gene2112Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G00840.1NO04G00840.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G00840 ID=NO04G00840|Name=NO04G00840|organism=Nannochloropsis oceanica|type=gene|length=1259bp
ATGAGGAGCACACGCAGCACCACAGCCTTCTTGGCACTCTTGGTGGCCAG
CAGCACTAACGCCTTCGTCCCCCCCTCGCATCCTGCCGCCACCTTGGCTG
CCCGCTCCGCGAACTTACCAGCCACGGCTGCTACCATCATGCACGCCACA
ACTGTGCCCCGTCGCGTGGGCCTTGAGGCTATACCCGATGCTGATTTGAA
GGAGGCCGACAAGACCCCTCCCCCCTCAACTTTCTTTGAGTGCACCCTCC
AGGCATATAACTCGGCCGCAGCGGCCATCAAAGACGGATATAAGCTGCTC
GAGGTGGAGTTTCCTCCCCTACCCGCCGCGGAGATGGCGTCGCAGgtatg
ctgactctggtaaaaagttgccgttctttcgctctatgtcttttcttcaa
gaaaaaaagacagaaagcatcaggtcatcctcatcctcatccctcctcat
cttcctccctccctccctcacagGCCTCAAGTGCTAACAGCATTGGCTCC
GCGAATATTAATCTCGCCACAGACGTCGCCAAATACTTCGTCCGTGAAGG
CAAGCAAGTTGTCATCCTCGTCCCGGATAAGGACGAACTCGACCTAATCG
AAGAAGGCATGGGCACCCTCTCCCCCGCCCCAAATGTCACCATCCGTGCC
GTCCGCGCCCGCAATTCAGAGTCCGCGGAGACGATGGGCGAGCTATTGCT
CGGAATTTTCTCCCGTGCCGCCAAAGGACGTGTGTTGCCGTGGTACAATG
CCGATATCTACATCAGCGTCATCACCTCCGGCCAAGAACTCCCTGACCTG
GAAGCCCTCCACGCTGCAGACCCCGACAAGCCCATGATTTTTTTCAACCT
TAACTTGGAGACGCACCGAGGCGACCTAGGGCTCCCCGCATTTCCTTCTA
AAGACCTCCACTACCGCTTTCTCTCTCAGATCAAGCCCGCCTACCTGTTG
CGCACGCGGCAGTACGCCCAGACCCTCTCCCGGCCCCCTTTTATCCTCAA
CTACCAAGGCGCCCTCTTCCGCACCTACCCCGGTGGATATCAATGCATGC
TTGACACGGGCAATGGACGATATCGACGGGTGGAGACCTCTAAGAACCGC
CCAGCGTTGAACGGGTTTAAGGAAATCATCACGGAGGCATTGGATGTGGA
TGATAACGAGACGCTGGCTGCTTTGAGGAAGGGGGCTTTTAGCAAGGGAA
CGTGGTGGGAGAAGGAGGAGAATCAGGTGAAGGAGGTATCGGATAACTGG
AGGACGTAG
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protein sequence of NO04G00840.1

>NO04G00840.1-protein ID=NO04G00840.1-protein|Name=NO04G00840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=377bp
MRSTRSTTAFLALLVASSTNAFVPPSHPAATLAARSANLPATAATIMHAT
TVPRRVGLEAIPDADLKEADKTPPPSTFFECTLQAYNSAAAAIKDGYKLL
EVEFPPLPAAEMASQASSANSIGSANINLATDVAKYFVREGKQVVILVPD
KDELDLIEEGMGTLSPAPNVTIRAVRARNSESAETMGELLLGIFSRAAKG
RVLPWYNADIYISVITSGQELPDLEALHAADPDKPMIFFNLNLETHRGDL
GLPAFPSKDLHYRFLSQIKPAYLLRTRQYAQTLSRPPFILNYQGALFRTY
PGGYQCMLDTGNGRYRRVETSKNRPALNGFKEIITEALDVDDNETLAALR
KGAFSKGTWWEKEENQVKEVSDNWRT*
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Synonyms
Publications