NO04G00690, NO04G00690 (gene) Nannochloropsis oceanica

Overview
NameNO04G00690
Unique NameNO04G00690
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1223
Alignment locationchr4:240327..241549 -

Link to JBrowse

Properties
Property NameValue
DescriptionReplication protein a 32 kDa
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:240327..241549 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
IPR036390WH_DNA-bd_sf
IPR004365NA-bd_OB_tRNA
IPR014892RPA_C
Vocabulary: Biological Process
TermDefinition
GO:0006259DNA metabolic process
Homology
[Close]
BLAST of NO04G00690 vs. NCBI_GenBank
Match: ETO81805.1 (hypothetical protein F444_03956 [Phytophthora parasitica P1976])

HSP 1 Score: 131.7 bits (330), Expect = 3.600e-27
Identity = 100/298 (33.56%), Postives = 153/298 (51.34%), Query Frame = 0 
Query:    8 YGAPTDAYGXXXXXXFMPGHGDFQGGAMGFGS--PDAGAGGGGKVSKEQKTLLPLTVHQL--LNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAVGVM--------GMGLGNMA-GGMMGGYGQKMXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293
            YG   +AY          G+ D+ GG  GF S  P        K S   +++LP+T+ QL  LN G D+       +DG ++  V++VG +  +   +T   +++DDG+G   C+ FV  DE     + R    +GSY+RVVG+LR +QG+  LS  ++  V+D NE+THHLLEVI+VHC NTKG +    A   M        G    N    G  GG+G  M    +    S   +A+LD  +     D G  +  +   L+ + +  QQ++ A+++L  EG +Y+T DE+H+K T
Sbjct:    3 YGGGYEAY----------GNDDYSGGG-GFMSSQPSGSQSTPTKRSGGAQSILPVTIKQLQSLNTGDDD----AVRLDGQEVSTVRLVGLLTNLTPHSTSLRFQLDDGSGAFDCQYFVNADEDASEGDLR----EGSYVRVVGKLRSFQGKSSLSCFNVVPVQDMNELTHHLLEVIYVHCYNTKGPLNDGKADVTMTSFNTPTKGANQWNQPNAGATGGFGGGMDYGMMDSNFSPEQKAILDV-LGTCTSDRGLKIDQIYADLNGQ-MNEQQLRSALNYLTSEGHVYSTIDEDHFKRT 279
[Close]
BLAST of NO04G00690 vs. NCBI_GenBank
Match: XP_002904532.1 (replication protein A 32 kDa subunit, putative [Phytophthora infestans T30-4] >EEY53901.1 replication protein A 32 kDa subunit, putative [Phytophthora infestans T30-4])

HSP 1 Score: 131.3 bits (329), Expect = 4.800e-27
Identity = 87/255 (34.12%), Postives = 138/255 (54.12%), Query Frame = 0 
Query:   49 KVSKEQKTLLPLTVHQL--LNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAVGVM--------GMGLGNMA-GGMMGGYGQKMXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293
            K S   +++LP+T+ QL  LNAG D+       +DG ++  V++VG +  +   +T   +++DDG+G   C+ FV  DE     + R    +GSY+RVVG+LR +QG+  LS  ++  V+D NE+THHLLEVI+ HC NTKG +    A   M        G    N    G  GG+G  +    +    S   +A+LD  +     D G  +  +   L+ + +  QQ++ A+++L  EG +Y+T DE+H+K T
Sbjct:   14 KRSGGAQSILPVTIKQLQSLNAGDDD----AVRLDGQEVSTVRLVGLLTNLTPQSTSLRFQLDDGSGAFDCQYFVNADEDASEGDLR----EGSYVRVVGKLRSFQGKASLSCFNVVPVQDMNELTHHLLEVIYAHCYNTKGPLNDGKADVTMTSFNTPTKGANQWNQPNAGATGGFGGGVDYGMMDSNFSPEQKAILDV-LGTCTSDRGIKIDQIYADLNGQ-MNEQQLRSALNYLTSEGHVYSTIDEDHFKRT 258
[Close]
BLAST of NO04G00690 vs. NCBI_GenBank
Match: XP_008901063.1 (hypothetical protein PPTG_08695 [Phytophthora parasitica INRA-310] >ETI53119.1 hypothetical protein F443_03891 [Phytophthora parasitica P1569] >ETN14040.1 hypothetical protein PPTG_08695 [Phytophthora parasitica INRA-310])

HSP 1 Score: 131.0 bits (328), Expect = 6.200e-27
Identity = 100/298 (33.56%), Postives = 153/298 (51.34%), Query Frame = 0 
Query:    8 YGAPTDAYGXXXXXXFMPGHGDFQGGAMGFGS--PDAGAGGGGKVSKEQKTLLPLTVHQL--LNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAVGVM--------GMGLGNMA-GGMMGGYGQKMXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293
            YG   +AY          G+ D+ GG  GF S  P        K S   +++LP+T+ QL  LN G D+       +DG ++  V++VG +  +   +T   +++DDG+G   C+ FV  DE     + R    +GSY+RVVG+LR +QG+  LS  ++  V+D NE+THHLLEVI+VHC NTKG +    A   M        G    N    G  GG+G  M    +    S   +A+LD  +     D G  +  +   L+ + +  QQ++ A+++L  EG +Y+T DE+H+K T
Sbjct:    3 YGGGYEAY----------GNDDYSGGG-GFMSSQPSGSQSTPTKRSGGAQSILPVTIKQLQSLNTGDDD----AVRLDGQEVSTVRLVGLLTNLTPHSTSLRFQLDDGSGSFDCQYFVNADEDASEGDLR----EGSYVRVVGKLRSFQGKSSLSCFNVVPVQDMNELTHHLLEVIYVHCYNTKGPLNDGKADVTMTSFNTPTKGANQWNQPNAGATGGFGGGMDYGMMDSNFSPEQKAILDV-LGTCTSDRGLKIDQIYADLNGQ-MNEQQLRSALNYLTSEGHVYSTIDEDHFKRT 279
[Close]
BLAST of NO04G00690 vs. NCBI_GenBank
Match: ETK92979.1 (hypothetical protein L915_03767, partial [Phytophthora parasitica] >ETL46401.1 hypothetical protein L916_03707, partial [Phytophthora parasitica] >ETL99535.1 hypothetical protein L917_03629, partial [Phytophthora parasitica] >ETM52695.1 hypothetical protein L914_03729, partial [Phytophthora parasitica] >ETP22930.1 hypothetical protein F441_03862, partial [Phytophthora parasitica CJ01A1])

HSP 1 Score: 131.0 bits (328), Expect = 6.200e-27
Identity = 100/298 (33.56%), Postives = 153/298 (51.34%), Query Frame = 0 
Query:    8 YGAPTDAYGXXXXXXFMPGHGDFQGGAMGFGS--PDAGAGGGGKVSKEQKTLLPLTVHQL--LNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAVGVM--------GMGLGNMA-GGMMGGYGQKMXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293
            YG   +AY          G+ D+ GG  GF S  P        K S   +++LP+T+ QL  LN G D+       +DG ++  V++VG +  +   +T   +++DDG+G   C+ FV  DE     + R    +GSY+RVVG+LR +QG+  LS  ++  V+D NE+THHLLEVI+VHC NTKG +    A   M        G    N    G  GG+G  M    +    S   +A+LD  +     D G  +  +   L+ + +  QQ++ A+++L  EG +Y+T DE+H+K T
Sbjct:   15 YGGGYEAY----------GNDDYSGGG-GFMSSQPSGSQSTPTKRSGGAQSILPVTIKQLQSLNTGDDD----AVRLDGQEVSTVRLVGLLTNLTPHSTSLRFQLDDGSGSFDCQYFVNADEDASEGDLR----EGSYVRVVGKLRSFQGKSSLSCFNVVPVQDMNELTHHLLEVIYVHCYNTKGPLNDGKADVTMTSFNTPTKGANQWNQPNAGATGGFGGGMDYGMMDSNFSPEQKAILDV-LGTCTSDRGLKIDQIYADLNGQ-MNEQQLRSALNYLTSEGHVYSTIDEDHFKRT 291
[Close]
BLAST of NO04G00690 vs. NCBI_GenBank
Match: KUF79034.1 (Replication protein A 32 kDa subunit [Phytophthora nicotianae] >KUF81798.1 Replication protein A 32 kDa subunit [Phytophthora nicotianae] >KUF87859.1 hypothetical protein AM588_10001646 [Phytophthora nicotianae])

HSP 1 Score: 131.0 bits (328), Expect = 6.200e-27
Identity = 100/298 (33.56%), Postives = 153/298 (51.34%), Query Frame = 0 
Query:    8 YGAPTDAYGXXXXXXFMPGHGDFQGGAMGFGS--PDAGAGGGGKVSKEQKTLLPLTVHQL--LNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAVGVM--------GMGLGNMAG-GMMGGYGQKMXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293
            YG   +AY          G+ D+ GG  GF S  P        K S   +++LP+T+ QL  LN G D+       +DG ++  V++VG +  +   +T   +++DDG+G   C+ FV  DE     + R    +GSY+RVVG+LR +QG+  LS  ++  V+D NE+THHLLEVI+VHC NTKG +    A   M        G    N    G  GG+G  M    +    S   +A+LD  +     D G  +  +   L+ + +  QQ++ A+++L  EG +Y+T DE+H+K T
Sbjct:    3 YGGGYEAY----------GNDDYSGGG-GFMSSQPSGSQSTPTKRSGGAQSILPVTIKQLQSLNTGDDD----AVRLDGQEVSTVRLVGLLTNLTPHSTSLRFQLDDGSGSFDCQYFVNADEDASEGDLR----EGSYVRVVGKLRSFQGKSSLSCFNVVPVQDMNELTHHLLEVIYVHCYNTKGPLNDGKADVTMTSFNTPTKGANQWNQPNTGATGGFGGGMDYGMMDSNFSPEQKAILDV-LGTCTSDRGLKIDQIYADLNGQ-MNEQQLRSALNYLTSEGHVYSTIDEDHFKRT 279
[Close]
BLAST of NO04G00690 vs. NCBI_GenBank
Match: XP_002290252.1 (replication protein A2, partial [Thalassiosira pseudonana CCMP1335] >EED92004.1 replication protein A2, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 130.2 bits (326), Expect = 1.100e-26
Identity = 95/277 (34.30%), Postives = 146/277 (52.71%), Query Frame = 0 
Query:   29 DFQGGAMGFGSPDAGAGGGGKVSK--EQKTLLPLTVHQLLNA----GQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFV-EQDE-TEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAVGV---MGMGLGNMAGG--MMGGYGQKMXXXXVGGGMSNLNQAVLDAFME--HNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYK 291
            D +GG     +P  G    GK  +  + +TL+P+T+  +L+A    G           D   +H VK+V  V    E +T     ++DGTG    +V+V E DE +   Q R++ C+   Y+R++GQ+RE+ G R +  +D+R V  G+EIT+H LEV   + ++ K R Q+ G +G+   MG G+GNMA      GG G         GG S LN AVL AF++   N+ D G  +  +   +S    T   V+ A++ L+ EG +Y+T DENHY+
Sbjct:   13 DNEGGFGSQNTPSRGGSSDGKPRRDYDAQTLIPVTIKMILDAYATPGAAGGSGDLQLKDERPIHMVKVVVAVRSHEERSTNLFLDIEDGTGFTQAKVWVNEGDECSGVVQLRQNACKDHQYVRIIGQVREFDGTRQIVANDVRPVSSGDEITYHFLEVAHSYEKHMK-RQQQGGGMGIGGAMGYGIGNMASAPPQQGGLGISAQSGGNMGGGSALNDAVL-AFIQGAGNNNDSGVHVNEITAKVSANGFTESDVRTAINNLSNEGHIYSTIDENHYQ 287
[Close]
BLAST of NO04G00690 vs. NCBI_GenBank
Match: XP_008613068.1 (hypothetical protein SDRG_08943 [Saprolegnia diclina VS20] >EQC33428.1 hypothetical protein SDRG_08943 [Saprolegnia diclina VS20])

HSP 1 Score: 129.0 bits (323), Expect = 2.400e-26
Identity = 78/256 (30.47%), Postives = 135/256 (52.73%), Query Frame = 0 
Query:   48 GKVSKEQKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKG--------RMQKPGAVGVMGMGLGNMAGGMMGGYGQK---MXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293
            G  S++ ++L P+TV Q+L A Q E       VDG +LH +++VG + ++   +T   + ++DGTG+L+ R+F++ D+  Y Q+     ++G YI  VG LR + G+  ++ +    V+D NE+THH L+ I+ H +N  G          Q PG  G    G  +      GGYGQ+           G S+  Q  +   +     ++G  +  + + L+ R ++  Q+++A+ +L  EG +Y+T DENH+K T
Sbjct:   28 GNTSRDNQSLTPVTVRQVLAALQAEGGDDAVHVDGKELHNIRVVGILTDMSPNSTNITFTLNDGTGLLASRLFLQVDDDHYQQQLVESLREGIYISAVGNLRTFSGKTTMTCYTATPVEDFNELTHHFLDCIYSHLRNLHGVIGGAPPVAKQDPG-FGSPTAGYNSFGASSTGGYGQQSTYQNFAATDSGFSDPGQQAILDILGATALEMGLSVDQIKQQLNGR-LSEAQLREALGYLTNEGHIYSTIDENHFKRT 281
[Close]
BLAST of NO04G00690 vs. NCBI_GenBank
Match: XP_012204796.1 (hypothetical protein SPRG_10350 [Saprolegnia parasitica CBS 223.65] >KDO24534.1 hypothetical protein SPRG_10350 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 129.0 bits (323), Expect = 2.400e-26
Identity = 78/256 (30.47%), Postives = 135/256 (52.73%), Query Frame = 0 
Query:   48 GKVSKEQKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKG--------RMQKPGAVGVMGMGLGNMAGGMMGGYGQK---MXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293
            G  S++ ++L P+TV Q+L A Q E       VDG ++H +++VG + ++   +T   + ++DGTG+L+ R+F++ D+  Y Q+     ++G YI  VG LR + G+   + + +  V+D NEITHH L+ I+ H +N  G          Q PG  G    G  +      GGYGQ+           G S+  Q  +   +     ++G  +  + + L+ R ++  Q+++A+ +L  EG +Y+T DENH+K T
Sbjct:   28 GNTSRDNQSLTPVTVRQVLAALQAESGDDAVHVDGKEVHNIRMVGILTDMSPNSTNITFTLNDGTGLLASRLFLQIDDDHYQQQLVESLREGIYISAVGNLRTFNGKTSFTCYTVSPVEDFNEITHHFLDCIYTHLRNLHGVIGGAPPAAKQDPG-FGSPTAGYNSFGASTSGGYGQQSAYQNFAATDSGFSDPGQQAILDILGATALEMGLSVDQIKQQLNGR-LSEAQLREALGYLTNEGHIYSTIDENHFKRT 281
[Close]
BLAST of NO04G00690 vs. NCBI_GenBank
Match: XP_005826979.1 (replication protein A2, 32kDa [Guillardia theta CCMP2712] >EKX39999.1 replication protein A2, 32kDa [Guillardia theta CCMP2712])

HSP 1 Score: 128.6 bits (322), Expect = 3.100e-26
Identity = 78/255 (30.59%), Postives = 140/255 (54.90%), Query Frame = 0 
Query:   54 QKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRM--------------QKPGAVGVMGMGLGNMAGGMMGGYGQKMXXXXVGGGMSNLNQAVLDAFMEHN-DGDV-GADLATVIRSLST---RNITPQQVQQAVDFLAQEGQLYTTTDENHY 290
            +K +LP+++ Q++NA QD  D     +DG D  QV I+  ++++ ET+T   + ++DGTG +   ++++QDE+E+    R+    G+Y+RVVGQ+R + G+R +    +R V D NE+T+HL + I  H  NT+G +              Q PG    MG G  + +     G G+       GG ++++ +AV  AF++    GD+ G  +   ++ +S    R+++  +V   ++ LA +G +Y+T DE H+
Sbjct:   33 EKGMLPVSIKQVMNAPQDSQD-EDIKIDGRDTKQVTIIAYIVDVKETSTSVTFSLEDGTGNIDAIMWIDQDESEFMVRSRAEWVVGTYVRVVGQVRSHNGKRSMVAFHLRTVTDFNELTYHLFDTIHAHLYNTRGPLADSKPQTGFPSSSFQSPGKPS-MGPGFTSPSQPGGAGAGRVDSSRPAGGPVTDMREAVHKAFIDFGATGDLTGLSIDNCVQQVSRVMGRSVSRAEVSSHIENLALDGHIYSTIDEEHF 285
[Close]
BLAST of NO04G00690 vs. NCBI_GenBank
Match: ORY06321.1 (replication protein A, subunit RPA32 [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 128.3 bits (321), Expect = 4.000e-26
Identity = 86/271 (31.73%), Postives = 140/271 (51.66%), Query Frame = 0 
Query:   26 GHGDFQGGAMG-FGSPDAGAGGGGKVSKEQKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVETATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLREYQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKG-RMQKPGAVGVMGMGLGNMAG--GMMGGYGQKMXXXXVGGGMSNLNQAVLDAFMEHNDGDVGADLATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT 293
            G G F     G   S   G   GG  +   + L P+++ QLL A Q   DAP F VD  +L Q+  +G +    E +T  +Y V+DGTG +  R ++E D+ E  Q++R+   +G Y+RVVGQ +++  +RH+    MR ++D NEITHH LEV++VH   T+   ++  G  G      G+     G  G    K      G      ++A++ A     D + G  + ++ + LS++     ++ QA+++L  EG LY+T D++H + T
Sbjct:    9 GGGGFLSSPFGESASTPTGTKRGGAAA---QNLTPVSIKQLLEATQIHADAP-FKVDEHELSQITFIGIIRRQSEQSTNVSYIVEDGTGSIDVRTWLENDDNEIQQQKRAQLVEGIYVRVVGQFKQFASKRHVVAFSMRPIEDYNEITHHFLEVVYVHLFRTRNPSVKHEGEQGYQPSFSGDPFNPTGQYGNQAYKQPEPVYGNEFKPSHKAIIYAIKSFPDTNEGVHVESIAQKLSSQ-FGRAEISQAIEWLVGEGHLYSTIDDDHVRCT 274
The following BLAST results are available for this feature:
BLAST of NO04G00690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
ETO81805.13.600e-2733.56hypothetical protein F444_03956 [Phytophthora para... [more]
XP_002904532.14.800e-2734.12replication protein A 32 kDa subunit, putative [Ph... [more]
XP_008901063.16.200e-2733.56hypothetical protein PPTG_08695 [Phytophthora para... [more]
ETK92979.16.200e-2733.56hypothetical protein L915_03767, partial [Phytopht... [more]
KUF79034.16.200e-2733.56Replication protein A 32 kDa subunit [Phytophthora... [more]
XP_002290252.11.100e-2634.30replication protein A2, partial [Thalassiosira pse... [more]
XP_008613068.12.400e-2630.47hypothetical protein SDRG_08943 [Saprolegnia dicli... [more]
XP_012204796.12.400e-2630.47hypothetical protein SPRG_10350 [Saprolegnia paras... [more]
XP_005826979.13.100e-2630.59replication protein A2, 32kDa [Guillardia theta CC... [more]
ORY06321.14.000e-2631.73replication protein A, subunit RPA32 [Basidiobolus... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL077nonsL077Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR105ngnoR105Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK009751NSK009751Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G00690.1NO04G00690.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|537853gene_1849Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100058g23gene2098Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G00690.1NO04G00690.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G00690 ID=NO04G00690|Name=NO04G00690|organism=Nannochloropsis oceanica|type=gene|length=1223bp
CCACAGACACTCCCACACACAACACCCTCATGTCCTACGGCGGCTACGAA
TACGGCGCACCCACAGACGCTTACGGTGGCGGGGGCGGGGGAGGCTTCAT
GCCCGGCCATGGCGACTTTCAGGGCGGGGCGATGGGCTTTGGGTCTCCCG
ACGCGGGCGCGGGCGGTGGCGGCAAGGTGAGTAAGGAGCAAAAGACACTG
CTGCCTTTGACGGTCCACCAGCTCTTGAACGCGGGGCAGGACGAGCCGGA
CGCGCCGACATTCACGGTGGATGGATGTGATTTGCACCAGGTGAAGATCG
TGGGGCAAGTGCTGGAGATTGTCGAGACAGCGACGATGCGGGCCTACAAG
GTGGATGACGGGACTGGAGTGTTGAGCTGCCGTGTGTTTGTCGAGCAAGA
CGAGACGGAATATGCACAGGAACGACGGAGCTACTGTCAGAAAGGCTCTT
ACATTCGTGTGGTGGGCCAGCTGAGGGAGTACCAGGGACAGAGGCATTTG
AGTGTGCATGACATGCGGGTAGTGAAGGACGGGAACGAGATTACGCACCA
CTTGCTTGAAGTCATTTGGGTGCACTGTCAGAACACTAAGGGGAGGATGC
AGAAGCCTGGGGCGGTAGGGGTGATGGGAATGGGCTTGGGGAACATGGCG
GGAGGAATGATGGGTGGGTATGGACAGAAGATGATGGGAGGGGGAGTAGG
GGGAGGAATGAGCAACCTGAACCAAGCGGTGTTGGACGCGTTCATGGAGC
ATAATGATGGGGATGTGGGCGCGGATCTGGCGACTGTGATTCGGTCATTA
TCGACGCGGAACATCACCCCGCAGCAGGTGCAGCAGGCGGTTGATTTCCT
GGCGCAGGAGGGGCAGCTGTACACGACGACGGATGAGAACCACTACAAGG
CCACTTAGAGGGAGGGGAGGGGGAGGGCGGAAGGGGCTGCAGTGGTAGTG
GTGGGAGCTTGGTTGGGCGGGAAAAGGTGGGTGAGTGCGAAGAGCAAGCA
GGAAGGCGAAGGCAGGATCCGAGAAGGGGGAGAAGGAAGATGTTTACCTG
TGTCCATGTACGTGTGTGGAGACAGAGGATGGAGGGGGGGAAATGATGTG
AAGGGGAGAGGCAACAAAAAGAAATCATGAACAGTGGTAGCAACCCCAAT
GACAACAGAAGCAGCAACGGCGAAATTCCTGCCAAAAGAAAGATATGAAA
ACCCAAAACGAGAGAAACGGGGG
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protein sequence of NO04G00690.1

>NO04G00690.1-protein ID=NO04G00690.1-protein|Name=NO04G00690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=293bp
MSYGGYEYGAPTDAYGGGGGGGFMPGHGDFQGGAMGFGSPDAGAGGGGKV
SKEQKTLLPLTVHQLLNAGQDEPDAPTFTVDGCDLHQVKIVGQVLEIVET
ATMRAYKVDDGTGVLSCRVFVEQDETEYAQERRSYCQKGSYIRVVGQLRE
YQGQRHLSVHDMRVVKDGNEITHHLLEVIWVHCQNTKGRMQKPGAVGVMG
MGLGNMAGGMMGGYGQKMMGGGVGGGMSNLNQAVLDAFMEHNDGDVGADL
ATVIRSLSTRNITPQQVQQAVDFLAQEGQLYTTTDENHYKAT*
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Synonyms
Publications