NO04G00500, NO04G00500 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO04G00500 vs. NCBI_GenBank
Match: GAQ90682.1 (DNA repair protein RAD50 [Klebsormidium nitens]) HSP 1 Score: 392.1 bits (1006), Expect = 7.300e-105 Identity = 380/1405 (27.05%), Postives = 630/1405 (44.84%), Query Frame = 0 Query: 39 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRRELERKTAEIQEIQAKQDKVEERISTLQNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQEMTGQSDESLQKRLASFAKDQEEVQRELARLRQKEMTHKKAIDGYRAEVQKLVGRRGELKAQMKQLTQLVEDRNKDIVALCDKYALAQPRTLSGALSQVIRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPEVEMKRFLFDFQGKKENLTTELDAFRTDKTRVLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAITNDLHGQAAVPASVLDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVELDSEQKVWESMKESSTERTEYEVNFRDYTNKMEELKAELARFNSSL---YRPLVPQDLTPELDDIQQAVTHLNAILFPQHDAAARSQARELTLARQRLTELATNQSRDKQEQERYVAKIGEMEKQSLVEKARRILEQLQGEFEEKIRKNPEKYSYKFDDREIDEAVKEVEQVVKMDVANLHDLQSKLNFAAKVVKSSSESRVCECCTSSLSARAVKAL-------EDNMGGFMA---RWEDKANRLREETLPMHEQY--LRDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDMEAAKKKLDESKVQVVGISNACAELYKKKEELDFRQKRLQ--AYSVDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSLEAKLKTMSRSQELEKEKAALKMRQGQVEAEVQQATEEEIPLRQELKGVQADFDALKSRLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVEQQQQQLEHDI-------QGMEGQLEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGEDGGGKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSR 1420 M+ ++KM ++GIRSFSPD++ IEFY PLT+IVG NG+GKTTIIECLK+ACTG+LPP S G +++HDPK+ +TE K IKLRFK G+ +V +RS QL K +K +E V++TI+P + + +L ++C D++ VP G+ A+LE+V+F HQ+E++WPL + A LKKKFD+IF +TRYTKALE I+K K +A++ K KL L L ++ A + +++ ++ +Q XXXXXXX +E + +S E L+ FAK ++ + A+L ++ + + +L +G+L+A+ + +DR++ I AL K+ +A + GA P+ F + + E L L + R ++ L A+ + + + V + +AEY E+++ ++++ I+ + ++L V + QK + M + +R + + +D K + K ++ + L + VP+ P L +++T+ + + + +A+++ + +R A + ++E ER K L+ R +L+ G++E E EA ++ E+ AN +Q+ + + + + +C C L++R A + +G M R + A R + + QY DLQ K + + + +E L+ A E+ A + E +++E KL+ V + A L + ++ +F+ + L A SV + LE++E +E S A R N A + S +A ++ +R ++ +++ + EA + E L+Q+L +Q + DAL D QR+ ++ + + ++R + G LLAG E + ++ I + E + E+G +++ + K+++ +D +R I+DNL YR ++ E ++ E+ ELQ ++ I +TT +A +DL KY+ ALD+ALM++H MK+EEINKII+ELW +TY+G DI+ I I S + A RSY YRVVM+ G LDMRGRCSAGQ+VLAS+VIRLALAE FC+NCG++ LDEPTTNLD N LAGA++R++ +R QQNFQLIVITHDE F ++ E Y+R+S+ Sbjct: 1 MSTIDKMLIKGIRSFSPDNKTVIEFYKPLTLIVGANGAGKTTIIECLKHACTGELPPNARS--GHTFVHDPKVAGETETKGQIKLRFKTTAGRDVVCIRSFQLTQKASKLE--YKAVESVLQTIDPRSGEKVALSYRCADMDREVPSLMGVPKAVLENVIFVHQDEANWPLAEAAVLKKKFDEIFSATRYTKALEVIKKLHKEQAQQVKEYKLKLDHLQTLKDAAFKLNSDIDTDNSKSAALQ--XXXXXXXXXXXXXXXXXXXXXXXLRKMQAWQNDIEVKEGTRAVLARQRDQLYNALEEESDESTEELRTFQEDFAKTVAGMRIQAAKLERQLTDAQMQDQSEKENFNRLQLMKGKLQAEAETCNNDRQDRDRLIQALAAKHGIA----VEGA-----------------------------------TPFPDQAASAFFDKARQQLEQLQRSLQQMKAVNKRRDDELTSNWESLRSQFLKADGSISLKMQQKADNEDKLEGFGRLLQDGPAIERA-FEETAERVEELQAEYNRKAEEAEREKYDEKIQDVDRELLAVRQRMADLQKEKDQMNAETADRVQLRIKKQDLQEKEKSYKQIMSEQQARLKKAFHGRVPE--APRLLAEMKSLTNSSRSQYEAVKQKSDDEAKKVAILEERHRAAAKTLTTLEREMER--------TKAFLMSNLRGLLD---GDYEL---------------NEFKEAKEDTEKDALTAKANFAVVQASEPLYQRYIDGAKKQHICVVCEKGLNSREEIAFVSKYENQKRTIGDQMVQCQRMSENAQRTLDAIRDLEPQYFAFADLQE-----KKLPAAERDVQSIEAELEKAREKSNDAALELSSTEVEFKEVE----KLEGIATTVDRLVQEAAALQDRIKDQEFKLETLSQAARSVADINTELEKLEDXXXXXXXXXXXXXXXXXXDNSEVSAAQTRWRN------ARDESFQANIQ-KNRLDDVRRQRE-------ETEASINSLGIEIQVLQQKLGPLQREQDALLRHRDTHRETAQREEAAEDEKGRAMQRDVDQLRAVNGKISKYLLAGGETRLRETLEKITRCVANQKAYEETISELGEKLKELNKQVQAQDTIKRNIDDNLNYRSVRDEERRLASEIDELQQKVVAAGDDTGLTEEINRGQSDRDTMNDEANRLRGTVSAYEGNIKRNRTELKDPRYADIENRYRNQLIQLKTTEMANKDLDKYYHALDKALMRFHSMKMEEINKIIKELWQQTYRGQDIDYIEIRSDAETTSSA-RSYAYRVVMRSGDAELDMRGRCSAGQKVLASLVIRLALAETFCLNCGILALDEPTTNLDTPNAESLAGALSRIMQDRKTQQNFQLIVITHDERFAQLIGHR-------EYAEKYYRISK 1300
BLAST of NO04G00500 vs. NCBI_GenBank
Match: XP_008380471.1 (PREDICTED: DNA repair protein RAD50 [Malus domestica]) HSP 1 Score: 390.6 bits (1002), Expect = 2.100e-104 Identity = 377/1424 (26.47%), Postives = 627/1424 (44.03%), Query Frame = 0 Query: 39 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRRELERKTAEIQEIQAKQDKVEERISTLQNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQEMTGQSDESLQKRL--ASFAKDQEEVQRELARLRQKEMTHKKAIDGYRAEV-------------------QKLVGRRGELKAQMKQLTQLVEDRNKDIVALCDKYALAQPRTLSGALSQVIRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPEVEMKRFLFDFQGKKENLTTELDAFRTDKTRVLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAITNDLHGQAAVPASVLDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVELDSEQKVWESMKESSTERTEYEVNFRDYTNKMEE----LKAELARFNSSLYRPLVPQ-DLTPELDDIQQAVTHLNAILFPQHDAAARSQARELTLARQRLTELATN---QSRDKQEQERYV-AKIGEMEKQSL-VEKARRILEQLQGEFEEKIRKNPEKYSYKFDD--REIDEAVKEVEQV--VKMDVANLHDLQSKLNFAAKVVKSSSESRVCECCTSSLSARAVKALEDNMGGFMARWEDKANRLREETLPMHEQYL----RDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDMEAAKKKLDESKVQVVGISNACAELYKKKEELDFRQKRLQAYSVDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSLEAKLKT---MSRSQELEKEKAALKMRQGQVEAEVQQATEEEIPLRQELKGVQADFDALKSRLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVEQQQQQLEHDIQGMEGQLEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGEDGGGKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSRE 1421 M+ ++KM ++GIRSF P+++ I F+ PLT+IVG NG+GKTTIIECLK +C+G+LPP S G S++HDPK+ +TE KA IKLRF+ GK +V +RS QL K FK ++ V++TINP T + L ++C D++ +P G+S AILE+V+F HQ+E++WPLQD +TLKKKFDDIF +TRYTKALE I+K K +A+E K KL L L ++ A +R ++ + + ++++ +E I + + + +++ D+ QK ++ ++EE + L K+ LKA + ++++L N+ V LC K VI+ L ++E D Q KK + EL+ + ++N V S +D + + E+ T + E EFE TI+ ++ + + +K +M +RT+ + D N+ + + R L P+ DL E+ + AVT + F +R E+ + + R+ E+ N +D + RY+ +K+ +++QS V+ +L+ K +++ EK Y F D R++ + + V + + LQ + F K +++ SS V A E + + D+ + EE + + ++ + R+L T +M+ + + + V ++K ++ + AL + + +D++ +K +D EL K E+ SR ++++E+ L L T+ +R + ++++EQ L + + E K+K +S + E+E L + +V+ + + E PL +E + + LK +L+ E ++ + K++E G L ++++Q LE +Q + + +E+ ++ ++DQ RR IEDNL+YR+ +AEV++ E+ L+ ++ I +TT +A +DL +Y+ ALD+ALM++H MK+EEINKIIRELW +TY+G DI+ I I S DG G TRSY+Y+V+M+ G T L+MRGRCSAGQ+VLAS++IRLALAE FC+NCG++ LDEPTTNLD N LA A+ R++ +R Q+NFQLIVITHDE F ++ Q E Y+RV+++ Sbjct: 1 MSTVDKMLIKGIRSFDPENKHVITFFKPLTLIVGPNGAGKTTIIECLKLSCSGELPPNARS--GHSFVHDPKVAGETETKAQIKLRFRTAAGKDVVCIRSFQLTQKASKME--FKAIDSVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLQLENLQTKKDIAYKLREQISQAQEKTNILKSEMQGLEGMIQDVNTKIQYTDTK---------------------------------LKDLKKLEDQISQKSAVRSTLVNEREEKHKALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEENDAESKITFLEKTLKASIWEISKL---ENEAEVHLCSK----------NERDSVIQKLFSRHNLGALPNPPFSNEVALNLTNRIKSRLLDLEK-----DLQDKKRSNEKELETTWDCYNDAKDHWKSIEAQKEAKEEIRNGLLKRIEEKKNERDSLELEVSN-------VDLSHIDEKEKNM---HIEFERKTNQYAEREFESTIRQKDNEMFSIEQMITVAKKEKAAMAVDMEDRTKLSMKKNDLENRKRQHRKIINENRERVRGVLKGRFPPEKDLRGEISQVLSAVT----MEFDDLSTKSREAENEVNMLQTRIQEINNNIYKHRKDMDSKRRYIESKLQALDQQSFTVDYYPTVLD------SAKEKRDVEKRKYNFADGMRQMFDPFERVARANHICPCCERPFSLQEEDEFVKKQRMNAA---------SSAEKLKVLAAESSTADSFFQQLDRLRMVYEEYVNIGKERIPNAERELDDLTQEMEQKSQALDDVLAVSAQVKAEKDSIQALMEPIENADRLFQDIQREQKLVD--------------ELAHKLEQ-------------GHGSRSMQDIESELDNLLETKDNLHREVMKLRSEQMDLQDDL---STVKTRWHNVREEKIKAANLLSDVKRAEEELERLTEEKNRVDLDEKLLAESLRPLSKEKDKLLGYHNDLKVKLNREYDEQAXXXXXXXXXXXXLNMINSKIKEYNDSKKGEKLQEIQEKQHLLESQLQSCKTRKKEILAELNKSKDLRANQDQVRRNIEDNLSYRKTKAEVEELTCELESLEDKMLKIGRKPKVQAELEKLSHEREEFLKRLNQNDGIISAHQSEISKHKIDLKNPDYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHSMKMEEINKIIRELWQQTYRGQDIDYICIHSDSDGAG--TRSYSYKVLMQTGDTELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNADSLAAALHRIMEDRKGQENFQLIVITHDERFAQLIGQR-------QHAEKYYRVAKD 1301
BLAST of NO04G00500 vs. NCBI_GenBank
Match: XP_002266665.3 (PREDICTED: LOW QUALITY PROTEIN: DNA repair protein RAD50 [Vitis vinifera]) HSP 1 Score: 389.8 bits (1000), Expect = 3.600e-104 Identity = 412/1394 (29.56%), Postives = 659/1394 (47.27%), Query Frame = 0 Query: 39 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRRELERKTAEIQEIQAKQDKVEERISTLQNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQEMTGQSDESLQKRLASFAKDQEEVQRELARLRQKEMTHKKAIDGYRAEVQKLVGRRGELKAQMKQLTQLVEDRNKDIVALCDKYALAQPRTLSGALSQVIRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPEVEMKRFLFDFQGKKENLTTELDAFRTDKTRVLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAITNDLHGQAAVPASVLDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVELDSEQKVWESMKESSTERTEYEVNFRDYTNKMEELKAELARFNSSLYRPLVPQDLTPELD---DIQQAVTHLNAILFPQHDAAARSQARELTLARQRLTELATNQSRDKQEQERYVAKIGEMEKQSLVEKARRILEQLQGEFEEKIRKNPEKYSYKFDD--REIDEAVKEVEQV--VKMDVANLHDLQSKLNFAAK--VVKSSSESRVCECCTSSLSARAVKALEDNMGGFMARWEDKANRLREETLPMHEQYLRDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDMEAAKKKLDESKVQVVGISNACAELYKKKEELDFRQKRLQAYSVDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSLEAKLK---TMSRSQELEKEKAALKMRQGQVEAEVQQATEEEIPLRQELKGVQADFDALKSRLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVEQQQQQLEHDIQGMEGQLEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGEDGGGKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSRE 1421 M+ ++KM ++GIRSF P+++ I F+ PLT+IVG NG+GKTTIIECLK +CTG+LPP S G S+IHDPK+ +TE K IKLRFK GK +V +RS QL K +K +E V++TINP T + L ++C D++ +P G+S A+LE+V+F HQ++++WPLQD +TLKKKFDDIF +TRYTKALE I+K K +A+E K KL L L ++ A +R +E+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T E + E QK+ A+ A++ E+ EL + K ++ I +++ KL + + + L Q + D +I L + + +L I+ L ++E D Q KK+++ EL D+ N F ++ V S +D + + + E T + E EFE I+ Q +L + ++ + + + M S +R + + + N ++ + + + + R ++ L P+ D +I QA+ L I F ++ +R +E+ + + ++ E+ N ++ K +++ +K Y D +++ + + V + V + + F K V +SS + S SA ++ D + + ++ +ET+P+ E+ L +L D K+ A L + LG V ++K ++ V AL V + ++++ +K++D+ + YK LDFR + + R +EE++ L TL+ T+ + L++++ EQ L N + T E K+K T+ ++ E+E L + QV+ + E PL +E + + +D++ LK++LD E + Q+ Q + + K++E G L ++++Q E +Q + + +E+ ++ + ++DQ +R IEDNL YR+ +AEV K E+ L+ ++ I +TT +A +DL +Y+ ALD+ALM++H MK+EEINKIIRELW +TY+G DI+ I I S +G G TRSY+Y+V+M+ G L+MRGRCSAGQ+VLAS++IRLALAE FC+NCG++ LDEPTTNLD N LA A+ R++ +R Q+NFQLIVITHDE F ++ Q E Y+RV+++ Sbjct: 1 MSTVDKMLIKGIRSFDPENKHVIAFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNARS--GHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKME--YKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDDANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLQILKDAAYKLRESIEQ-------------------DXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQDQISTKTAERSTLFKEQ-QKQYAALAEENEDTDEELNEWKTK---FEERIALLESKISKLEREMDDTETKGSFLKQTINDYIWEISKLQTEAEVHS--SLKNERDSTIQKLFARNNLGSLPSVPFSNEIALNFTNRIKTRLMDLEK-----DLQDKKKSIEMELKV-AWDRYMDANDHWKDIEAQKQAKVEIKSGILKRIEEKENERDSFELQISN------VSLSHIDEREKNL---RIEVERKTNQLAEREFESNIRQKQSELYSIEQKIKALNREKDIMAVDSEDRVKLSLKKGELENHKKKHQKIMDEYKDRI-RGVLKGRLPPDKDLKKEITQALRAL-GIEFDDMNSKSREAEKEVNMLQMKIEEV-NNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYMKAFDLAKEKRDVQKSKYNIADGMKQMFDPFERVARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLAVESSSAESLFLQLDKLRMVYEEYV----KMXKETIPLAEKNLNELTE-ELDQKSQA-LDDVLG-VLAQVKTDKDSVEALMQPVETADRLFQEIQTWQKQVDDLE-------------YK----LDFRGQGV---------RSMEEIQLELNTLQNTKDNLHNDLEKLRDEQRYMENDLSN---IQIRWHTLREEKVKAANTLRDVKKAEEELDRLVEEKSQVDLHEKHLAEALGPLSKEKEKLLSDYNDLKAKLDFEYEQQAEQKRNYQQEVEALLKVTSKIKEYYDSKKGERLKELKEKQSLSESQLQSCDARKQEILTELNKSKDLMRNQDQLKRNIEDNLNYRKTKAEVDKLTIEIELLEDRILKIGGVSAVEVDLGKLSQERERLLSELNRCHGTTSVYQSNISKHKIDLKQTQYKDIDKRYCDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDCIRIHSDSEGAG--TRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIGQR-------QHAEKYYRVAKD 1302
BLAST of NO04G00500 vs. NCBI_GenBank
Match: XP_019414681.1 (PREDICTED: DNA repair protein RAD50 [Lupinus angustifolius] >XP_019414682.1 PREDICTED: DNA repair protein RAD50 [Lupinus angustifolius]) HSP 1 Score: 389.4 bits (999), Expect = 4.800e-104 Identity = 401/1397 (28.70%), Postives = 650/1397 (46.53%), Query Frame = 0 Query: 39 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRRELERKTAEIQEIQAKQDKVEERISTLQNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQEMTGQSDESLQKRLASFAKDQEEVQRELARLRQKEMTHKKAIDGYRAEVQKLVGRRGELKAQMKQLTQLVEDRNKDIVALCDKYALAQPRTLSGALSQVIRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPEVEMKRFLFDFQGKKENLTTELDAFRTDKTRVLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAITNDLHGQAAVPASVLDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVELDSEQKVWESMKESSTERTEYEVNFRDYTNKMEELKAELARFNSSLYRPLVPQDLTPELDDIQQAVTHLNAIL---FPQHDAAARSQARELTLARQRL---TELATNQSRDKQEQERYV-AKIGEMEKQ-SLVEKARRILEQLQGEFEEKIRKNPEKYSYKFDDREIDEAVKEVEQVVKM----DVANLHDLQSKLNFAAKVVKSSSESRVCECCTSSLSARAVKALEDNMGGFMARWEDKANRLREETLPMHEQYLRDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDMEAAKKKLDESKVQVVGISNACAELYKKKEELDFRQKRLQAYSVDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSLEAKLKTMSRSQE---LEKEKAALKMRQGQVEAEVQQATEEEIPLRQELKGVQADFDALKSRLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVEQQQQQLEHDIQGMEGQLEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGEDGGGKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSRE 1421 M+ ++KM ++GIRSF P+++ I F+ PLT+IVG NG+GKTTIIECLK +CTG+LPP S G S+IHDPK+ +TE K IKLRFK GK +V +RS QL K +K +E V++TINP T + L ++C D++ + G+S AILE+V+F HQ+E++WPLQD +TLKKKFDDIF +TRYTKALE I+K K +A+E K KL L L ++ A +R + I QD+ E XXXXXXXXXXXXXXXXXXX TQ T E QK+ A+ +++ E+ EL + K + AI ++ KL + + + L + ++D K+I L + +L I+ L +E D Q KK+ +L D N F +D + + + + E T + E EFE I+ Q +L + ++ + + M S +R + + + N+ ++ + + + R L + P D+++ +T + F +A R +E+ + + ++ + ++R++ +K+ ++Q S ++ +LE +EK KY+ R++ + ++V + + D + +V +S+ R+ S +A + D + +E+ +L +ET+P E+ L L+ D +L + LG V ++K ++ V AL + + ++++A +K++++ + YK LDF+ + +R LEEV+ L TL+ T+ + L++++ EQ L + RA E K+K + QE +E+E +L + Q++ + + E PL ++ + AD+D LK+RL+ E D Q+ + + K++E + G L + +++ Q E ++ + + +E+ ++ + ++D +R IEDN+ YR+ +AEV K +E+ L+ + I +TT +A +DL +Y+ ALD+ALM++H MK+EEINKIIRELW +TY+G DI+ I+I S +G G TRSY+Y+V+M+ G L+MRGRCSAGQ+VLAS++IRLALAE FC+NCG++ LDEPTTNLD N LA A+ R++ +R Q+NFQLIVITHDE F M+ Q E Y+RV+++ Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNARS--GHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKME--YKAIESVLQTINPHTGEKVCLSYRCADMDKEITALMGVSKAILENVIFVHQDEANWPLQDSSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTYKLKLENLLTLKDAAYKLR----------ESITQDQDQTESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKLKEHISTKT--------TQRST--LFEENQKQYAALSEENEDTDEELMEWKTK-FGERVAI--LNTKISKLEREVKDTDTRSEFLNETIKDSIKEISKL--QTEAEAHMSLKNERDSSIQNLFAKYNLGSLPESSFTDEVALNLTNHVISRLKALER-----DLQDKKKTNDNKL-KMAWDSYVSANDCWKSTEAKKQAKIDEKARNLKRIEDKKNERKTFEPQISDTN---------FSRIDERERSLQIEVERKTSQLAEREFEANIRQKQTELFSIDQKIKDVSREKDIMASDSEDRVKLSLKKAELENQKKKHRKIIDEHKDKIRRVL--KGRVPPDKDVKKEITKALRTVEAEFDDLNAKYREAEKEVNMLQMKIXXXXXXXXXXXXXXESRKRFIESKLQSFDQQRSGIDAYLTVLE----SSKEKRDVQTSKYNIADGMRQMFDPFEKVARAHHFCPICERPFSADEEDDFVKKQRVKAASTAERMKLLAMESSNADSHYQQLDKL---RIVYEEHI-KLSKETIPNSEKELHQLKEELDDKS--QALDDVLG-VLAQIKNDKDVVEALVQPIETADRLFQEIQAVQKQVEDLE-------------YK----LDFQGQ---------GARSLEEVQFELNTLQGTKDTLHTELEKLREEQRYMENDLHSINSRWRAQR---EEKMKAANLLQEVKRVEEELESLTQEKTQLDLDEKHLAEALGPLSKKKDKLYADYDELKNRLNHEYEDLAEQKRNYQLEVESLLKMTSKIKEYSDLKKGDRLKEMLEKKYQSESQLKSCDTKKQEILVELNKSKDLMRNQDILKRNIEDNINYRKTKAEVDKLADEIETLETNMLKVGEVSTVETELRKLSQERERLLSEVNRCRGTMSVHQSNISKNKIDLKQTQYKDIDKRYFDQLIQLKTTEMANKDLDRYYSALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIHSDSEGAG--TRSYSYKVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENFQLIVITHDEHFAHMIGQR-------QHAERYYRVAKD 1302
BLAST of NO04G00500 vs. NCBI_GenBank
Match: XP_018844064.1 (PREDICTED: DNA repair protein RAD50 [Juglans regia]) HSP 1 Score: 389.0 bits (998), Expect = 6.200e-104 Identity = 401/1432 (28.00%), Postives = 661/1432 (46.16%), Query Frame = 0 Query: 39 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRRELERKTAEIQEIQAKQDKVEERISTLQNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQEMTGQSDESLQKRLASFAKDQEEVQRELARLRQKEMTH----------------------------KKAIDGYRAEVQKLVGRRGELKAQMKQLTQLVEDRNKDIVALCDKYALAQ----PRTLSGALSQVIRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPEVEMKRFLFDFQGKKENLTTELDAFRTDKTRVLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAITNDLHGQAAVPASVLDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVELDSEQKVWESMKESSTERTEYEVNFRDYTNKMEELKAELARFNSSLYRPLVPQDLTPELD---DIQQAVTHLNAILFPQHDAAARSQARELTLARQRLTELATNQS---RDKQEQERYV-AKIGEMEKQSL-VEKARRILEQLQGEFEEKIRKNPEKYSYKFDD--REIDEAVKEVEQVVKMDVANLHDL--QSKLNFAAKVVKSSSESRVCECCTSSLSARAVKALEDNMGGFMARWE------DKANRLREETLPMHEQYLRDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDMEAAKKKLDESKVQVVGISNACAELYKKKEELDFRQKRLQAYSVDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSLEAKLKTMSRSQELEKEKAALKMRQGQVEAEVQQATEEEIPLRQELKGVQADFDALKSRLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVEQQQQQLEHDIQGMEGQLEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGEDGGGKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSRE 1421 M+ ++KM ++GIRSF P+++ I F+ PLT+IVG NG+GKTTIIECLK +CTG+LPP S G S+IHDPK+ +TE K IKLRFK GK +V +RS QL K +K +E V++TINP T + L ++C D++ +P G+S A+LE+V+F HQ+E++WPLQD +TLKKKFDDIF +TRYTKALE I+K K +A E K KL L EN +T D +L A+ Q ER +L+ + XXXXXXXXXXXXXXXXXXXXXX T + +++ +A K+ I+ Y E+ KL + E +A M L +R+ I L ++ L P + GAL + R+ L +E D + KK++ EL D N F ++++ L + ++ E T + E +FE I+ Q +L + ++ + + + M S +R + + + N ++ K + + + R ++ L PE D +I QA+ + I F + +R +E+ + + ++ E+ + S +D + ++R++ +K+ +++Q L ++ ++LE K +K+ +K Y D R++ + + VA H + + F+A+ + + + +S+ + + N F + + ++ ++ EET+P E +DL T ++ + + + V ++K ++ + L + + ++++ K++D+ + YK LDFR + + R +EE+++ L TL++T+ + +++ EQ L N T+ ++ E+E L + QV+ + + E PL +E + +D + LK++L+ E ++ Q+ Q + + +++E + L V+++Q E +Q + + +E+ ++ + ++DQ RR IEDNL YR+ +AEV + E+ L+ ++ I +TT +A +DL +Y+ ALD+ALM++H MK+EEINKIIRELW +TY+G DI+ I+I S +G G TRSY+YRV+M+ G L+MRGRCSAGQ+VLAS++IRLALAE FC+NCG++ LDEPTTNLD N LA A+ R++ +R Q+NFQLIVITHDE F ++ Q E Y+RV+++ Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVITFFKPLTLIVGPNGAGKTTIIECLKLSCTGELPPNARS--GHSFIHDPKVAGETETKGQIKLRFKTAAGKDVVCIRSFQLTQKASKME--YKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAVLENVIFVHQDEANWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAHEIKTYKLKL----ENLQTLKDAAYKLRESIAQDQ----------ERTESLKTQMXXXXXXXXXXXXXXXXXXXXXXXLRKLQDQ---------ISTKTAERSTLFKEQXXXYAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSFLKQTINEYIWEISKL---QTEAEAHM----SLKNERDSTIQKLFARHNLGSLPNTPFSNEGALGLINRI---------------------------KSRLTNLEK-----DLEDKKKSNENELKT-AWDHYMDANDRWKNMDAQKQAKLEIKSGILKRIEEKENERDSFELRISNVN---------LSHIDEKEKNLHIEVERKTNQLAEKDFESNIRQKQSELYSIEQKIKAINREKDIMAADSEDRVKLSLKKAELDNHKKKHKKIIDEYKDRI-RGVLKGRLPPEKDLKKEITQALRAV-GIEFDDLNTKSREAEKEVNMLQIKIQEVNNSLSKHHKDMESRKRFIESKLQSLDRQYLSIDAYLKVLE------SAKEKKDVQKSKYNIADGMRQMFDPFER--------VARAHHVCPCCERPFSAEEEDEFVKKQRVKAASSAEHMKVLAVETSNADSFFQQLDKLRMVYEEYVKIGEETIPNAE---KDLHGLTEELDQKSQAFDDVLGVLAQVKADKDSIEVLVQPIDTADRLFQEIQTWLKQVDDLE-------------YK----LDFRGQGV---------RTMEEIQSELNTLQSTKDGLHNXXXKLRDEQRYMENDLSNIQIRWHTVREEKVNAANTLRDVKKAEEELERLTEEKSQVDLDDKHLVEALGPLSKEKDKLLSDHNELKAKLNREYEEQAEQKRNYQQEVESLLKITSRIKEYYDLKKDDRLTEVQEKQSLSESQLQSCDVRKQEILAELNKSKDLMRNQDQLRRNIEDNLNYRKTKAEVDELTREIESLEERILKIGGVSTIEAELRKLSQERERLLSELNRCHGTMSVYQSNISKNKIDLKQAQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYISIRSDSEGAG--TRSYSYRVLMQTGDAELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNAESLAAALLRIMEDRKGQENFQLIVITHDERFAQLIGQR-------QHAEKYYRVAKD 1302
BLAST of NO04G00500 vs. NCBI_GenBank
Match: XP_010557039.1 (PREDICTED: DNA repair protein RAD50 isoform X1 [Tarenaya hassleriana] >XP_019059653.1 PREDICTED: DNA repair protein RAD50 isoform X1 [Tarenaya hassleriana] >XP_019059654.1 PREDICTED: DNA repair protein RAD50 isoform X1 [Tarenaya hassleriana] >XP_019059655.1 PREDICTED: DNA repair protein RAD50 isoform X1 [Tarenaya hassleriana]) HSP 1 Score: 388.7 bits (997), Expect = 8.100e-104 Identity = 374/1397 (26.77%), Postives = 631/1397 (45.17%), Query Frame = 0 Query: 39 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRRELERKTAEIQE--IQAKQDKVEERISTLQNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQEMTGQSDESLQKRLASFAKDQEEVQRELARLRQKEMTHKKAIDGYRAEVQKLVGRRGELKAQMKQLTQLVEDRNKDIVALCDKYALAQPRTLSGALSQVIRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPEVEMKRFLFDFQGKKENLTTELDAFRTDKTRVLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAITNDLHGQAAVPASVLDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVELDSEQKVWESMKESSTERTEYEVNFRDYTNKMEELKAELARFNSSLYRPLVPQDLTPELDDIQQAVTHLNAILFPQHDAAARSQARE-----LTLARQRLTELATNQSRDKQEQERYV-AKIGEMEKQS-LVEKARRILEQLQGEFEEKIRKNPEKYSYKFDD--REIDEAVKEVEQV--VKMDVANLHDLQSKLNFAAK--VVKSSSESRVCECCTSSLSARAVKALEDNMGGFMARWEDKANRLREETLPMHEQYLRDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDMEAAKKKLDESKVQVVGISNACAELYKKKEELDFRQKRLQAYSVDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSLEAKLKTMSRSQELEKEKAALKMRQGQVEAEVQQATEEEIPLRQELKGVQADFDALKSRLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVEQQQQQLEHDIQGMEGQLEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGEDGGGKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSRE 1421 M+ ++KM ++GIRSF P+++ I F+ PLT+IVG NG+GKTTIIECLK +CTG++PP S G S+IHDPK++ +TE KA IKLRFK GK +V +RS QL K FK +E V++TINP T + L ++C D++ +P G+S AILE+V+F HQ+ES+WPLQD +TLKKKFDDIF +TRYTKALE I+K K + +E K KL L EN +T D +L A+ QE +K E S + A E +DE L++ F + ++ ++ +L ++ + I + + +L+ + + L +R+ I + ++ L + + ++ + L E+E+ D Q KK++ T + D+ N F DL ++V + +D + V + E T++ E +FE I + + ++ + + + M + +R + + + N ++ K + + R ++ L E D ++ V L + D + +S+ E L + Q + + +DK+ ++RY+ +K+ + ++S ++ ++LE K R++ +K Y D R++ + + V + V + + +F K V SSS V + S +A +V D + ++ ++L ET+P+ E+ L++L+ + K+ A L + LG + ++K ++ + AL + E ++++ +K++++ + YK LDFR ++ +EE+++ L +L++T+ + + L++++ EQ + L A +D++ALK +L+ E + ++ Q + K+ E + G L G++++Q+ E +Q + + +E+ ++ + ++D RR IEDNL YRR +AEV++ E+ L+ + I +TT +A +DL +Y+ ALD+ALM++H MK+EEINKIIRELW +TY+G DI+ I I S +G G TRSY+Y+V+M+ G T L+MRGRCSAGQ+VLAS++IRLALAE FC+NCG++ LDEPTTNLD N LA A+ R++ +R Q+NFQLIVITHDE F ++ Q E Y+R+S++ Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVITFFRPLTLIVGANGAGKTTIIECLKVSCTGEMPPNARS--GHSFIHDPKVSGETETKAQIKLRFKTAAGKDVVCIRSFQLTQKASKME--FKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQTQEIKTYKLKL----ENLQTLKDAAYKLRECIAQDQERTESSKVQMAELETSIQKVDAEVHNKEMMLKDLRKLQDQISRKTAERSTLFKEQQKQYAALAEENEDTDEELKEWKTKFEERIAILETKIRKLEREMDDTETTISSLQNAKTNCMLEMSKLQTEAEAHMSLKNERDATIQKIFSRHNLGTIPSFPFSTEVILNL-----------------------TNRIKSRLSEIEV-----DLQDKKKSNETAVST-TWDRYMDANDRWKSVEAQKRAKDEIKSGILKRIEEKEIERETF-----DLE-ISSVDLTQIDEREKNV---QLELERKTKQHSEQDFESKIXXXXXXIYSIEQKIKTLNRERDVMAGDAEDRVKLSLKKTEVENVRKKHKKIIDDCKDKI-RGMLKGRLPAEKDLKKEIVQALRSTEREYDDLSLKSREAEKEVNMLQMKIQEVNNSLSKHQKDKESRKRYIESKLQVLNQESYTIDAYPKLLE------SAKERRDVQKSKYNIADGMRQMFDPFERVARAHHVCPCCERPFSAEEEDSFVKKQRVKASSSAEHVKVLASESSNADSVFQQLDKLRSVF----EEYSKLTNETIPLCERSLKELRE-ELEQKSQA-LDDVLG-ILAQVKADKDSIEALVQPLDNAERLFQEIQTYQKQIEDLE-------------YK----LDFRGLGVKT---------MEEIQSDLSSLQSTKDKLHDELEKLRDEQIYMERDLSCLQARWHALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSDYNALKVKLNQEYEELAEKKRNYQQEVEALLKANSKINEYNDLKKGERLNGIQEKQRVSESQLQTCQAKKDEISAELNKSKDLMRNQDHLRRNIEDNLNYRRTKAEVEELTREIESLEESILKIGGVSAVEAELVKLSQERERLLSELNRGRGTVSVYESNISKNRVELKQTQYKDIDKRYFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDIDYIRIHSDSEGAG--TRSYSYKVLMQTGDTELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNSESLAAALLRIMDDRKGQENFQLIVITHDERFAQLIGQR-------QHAEKYYRISKD 1302
BLAST of NO04G00500 vs. NCBI_GenBank
Match: ETL97278.1 (hypothetical protein L917_05411 [Phytophthora parasitica]) HSP 1 Score: 387.9 bits (995), Expect = 1.400e-103 Identity = 430/1424 (30.20%), Postives = 640/1424 (44.94%), Query Frame = 0 Query: 39 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRRELERKTAEIQEIQAKQDKVEERISTLQNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQEMTGQSDESLQKRLASFAKDQEEVQRELARLRQKEMTHKKAIDGYRAEVQKLVGRRGELKAQMKQLTQLVEDRNKDIVALCDKYAL------AQPRTLSGALSQVIRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPEVEMKRFLFDFQGKKENLTTELDAFRTDKTRVLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAITNDLHGQ--AAVPASVLDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVELDSEQKVWESMKESSTERTEYEVNFRDYTNKMEELKAELARFNSSLYRPLVPQDLTPELDDIQQAVTHLNAILFPQHDAAARSQARELTLARQRLTELATNQSRDKQEQERYVAKIGEMEKQSLVEKARRILEQLQGEFEEKIRKNPEKYSYKFDDREIDEAVKEVEQVVKMDVANLHDLQSKLNFAAKVVKSSSESRVCECCTSSLSARAVKALEDNMGGFMARWEDKAN--RLREETLPMHEQYLRDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDMEA----AKKKLDESKV---QVVGISNACAELYKKKEELDFRQKRLQAYSVDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSLEAKLKTMSRSQELEKEKAALKMRQGQVEAEVQQATEEEIPLRQELKGVQADFDALKSRLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVEQQQQQLEHDIQGMEGQ-------LEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGEDGG--GKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSREPAPGGRAYSTIQVCEW 1437 M+ +EK+++RGIRSFSP+ E+ IEFY PLT+++G NG GKTT+IECLK ACTG LPPG S GQS IHDPK+ EVKASI+LRF+ R GK M+V R+ Q++ K+ N FK L+GVI+ +N + +K SL HKC +L+ +P G+S AILESV+FCHQEES+WPL++GA LKK+FD+IFES RYTKALEAI K +K R E K+ K DL L + + A +IR + XXXXXXXXXXXXXXXXXXXX + + +D+ L+ L + E+ +R RL++++ +K + + L + ++ + + V D L KY +Q +S L++ V XXXXXXXXXXXXXXXXXXXXXXXXXXXX E L + D+ R L LH Q A +S + + + +A++ M + + F + + + + ++ ++ + E +R+EY + + E A++ +P L L +I L + + ++ RE A QRL E T+ +K+ E E SL K ++ Q +E + +K D + + VKE E+ + ++ + F K + C C +S +A E + DK + ++ ++ + LQ T + M S R+ L E+E + ++ + LE ++D +A A+++ D +K + + + EL+ + ++R++ S + L +VE A QAE KL+ ++ +E ++ QR E +R DF K ++++ G L +E++ Q + +I + + L ++ PQ++ K L + + +R+I+DNL YR +Q E+ K E+ +L+ + I ETT +AV DL +Y KALD +L+QYH K++EIN IIR LW TY+G DI+ I +VSG+ G KA RSY+YRVVMKK +DMRGRCSAGQ+VLA++VIRLALAE FC+NCG++ LDEPTTNLD ENK GLA AI ++ R +QQNFQL+ ITHDE+FV M+ + + + + PE+YWR+ RE G R S I+ EW Sbjct: 1 MSSIEKLSIRGIRSFSPNREEIIEFYHPLTILLGDNGCGKTTVIECLKLACTGGLPPGARS--GQSLIHDPKIAGTNEVKASIRLRFRNRAGKAMLVHRTYQVRQTKKTMN--FKALDGVIRVVNELGEK-VSLSHKCGELDQHIPDMLGVSKAILESVIFCHQEESNWPLREGAELKKRFDNIFESARYTKALEAIRKLKKARLENAKDYKRDLDVLTTHMKMAEEIRDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDVVMKEQSVRTAYSK--IENIMSDTDDELRGFLNDYDAIIEDHRRAFTRLQEQDEKLQKEQHKAKEDYVTLRDNKARVETNIDTYQKKVADLIDSASKLSTKYRFHLQPLSSQQEDISTFLAEFRNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALNRDKKVI-ADRLRELGGA-------------------------------------GLHSQRDAEEMSSQVSEAERALEDYRAKHNVMALRDEIQGFNRQMSDINHVIEDLGQQISQLRIYARRNAEIEFQRSEYRKKQEIFQASLHEKVADIEEIFEGGEKPTDRSSLVSALRNIDD--------LIAERKHSLDTKRREQASAEQRLMENTTS------------SKLAEKELNSLRSKKNQLDRQHMTGLKELL----DKVIPGHDLKNAELGVKEAERAYADAKDKVVRRKNMVMFLNIYKKKGLKDHCCPLCERDMSPEEEQAFESIL-------SDKTDDGKVADKIKKAEDLEKSSLQTLTQIKEKMPSWRKWL-ELETAIPEKVTELEEIYAAQKALEVDVQDKKAVFDLAQEQFDAAKTAKSDMEILRKSADELHYSDVAITKEEERMRG-SQGSNGCSLSDVEAEKD---AKQAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKLRIETQRKEYDEAIXXXXXXXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXXXXAQRSELQERQGDFRVFSDKCKQVQ----HGELDRLEREVQTISDNIAQTKQREDRVVQALADLAPQMKSAEKNLSENEIVKRRIQDNLDYRELQKELAKMRAEVEDLKNHIGNLPSLDDVNDRVEAADAALTSAQRSAAMMVGKRQQLMEEIREQKIKLRVPTLKDVEEKYRHKLIQFETTQMAVTDLDRYFKALDESLLQYHSKKVDEINTIIRSLWQITYKGQDIDTIELVSGQQDGAVSKAARSYDYRVVMKKAGAAIDMRGRCSAGQKVLAALVIRLALAETFCLNCGILALDEPTTNLDTENKFGLAQAITDILNARSQQQNFQLVCITHDEEFVQMLSRTQAMEG--TRPEFYWRILREDIGGNRFVSKIERREW 1337
BLAST of NO04G00500 vs. NCBI_GenBank
Match: ETP48513.1 (hypothetical protein F442_05769 [Phytophthora parasitica P10297]) HSP 1 Score: 387.5 bits (994), Expect = 1.800e-103 Identity = 430/1424 (30.20%), Postives = 640/1424 (44.94%), Query Frame = 0 Query: 39 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRRELERKTAEIQEIQAKQDKVEERISTLQNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQEMTGQSDESLQKRLASFAKDQEEVQRELARLRQKEMTHKKAIDGYRAEVQKLVGRRGELKAQMKQLTQLVEDRNKDIVALCDKYAL------AQPRTLSGALSQVIRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPEVEMKRFLFDFQGKKENLTTELDAFRTDKTRVLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAITNDLHGQ--AAVPASVLDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVELDSEQKVWESMKESSTERTEYEVNFRDYTNKMEELKAELARFNSSLYRPLVPQDLTPELDDIQQAVTHLNAILFPQHDAAARSQARELTLARQRLTELATNQSRDKQEQERYVAKIGEMEKQSLVEKARRILEQLQGEFEEKIRKNPEKYSYKFDDREIDEAVKEVEQVVKMDVANLHDLQSKLNFAAKVVKSSSESRVCECCTSSLSARAVKALEDNMGGFMARWEDKAN--RLREETLPMHEQYLRDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDMEA----AKKKLDESKV---QVVGISNACAELYKKKEELDFRQKRLQAYSVDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSLEAKLKTMSRSQELEKEKAALKMRQGQVEAEVQQATEEEIPLRQELKGVQADFDALKSRLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVEQQQQQLEHDIQGMEGQ-------LEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGEDGG--GKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSREPAPGGRAYSTIQVCEW 1437 M+ +EK+++RGIRSFSP+ E+ IEFY PLT+++G NG GKTT+IECLK ACTG LPPG S GQS IHDPK+ EVKASI+LRF+ R GK M+V R+ Q++ K+ N FK L+GVI+ +N + +K SL HKC +L+ +P G+S AILESV+FCHQEES+WPL++GA LKK+FD+IFES RYTKALEAI K +K R E K+ K DL L + + A +IR + XXXXXXXXXXXXXXXXXXXX + + +D+ L+ L + E+ +R RL++++ +K + + L + ++ + + V D L KY +Q +S L++ V XXXXXXXXXXXXXXXXXXXXXXXXXXXX E L + D+ R L LH Q A +S + + + +A++ M + + F + + + + ++ ++ + E +R+EY + + E A++ +P L L +I L + + ++ RE A QRL E T+ +K+ E E SL K ++ Q +E + +K D + + VKE E+ + ++ + F K + C C +S +A E + DK + ++ ++ + LQ T + M S R+ L E+E + ++ + LE ++D +A A+++ D +K + + + EL+ + ++R++ S + L +VE A QAE KL+ ++ +E ++ QR E +R DF K ++++ G L +E++ Q + +I + + L ++ PQ++ K L + + +R+I+DNL YR +Q E+ K E+ +L+ + I ETT +AV DL +Y KALD +L+QYH K++EIN IIR LW TY+G DI+ I +VSG+ G KA RSY+YRVVMKK +DMRGRCSAGQ+VLA++VIRLALAE FC+NCG++ LDEPTTNLD ENK GLA AI ++ R +QQNFQL+ ITHDE+FV M+ + + + + PE+YWR+ RE G R S I+ EW Sbjct: 1 MSSIEKLSIRGIRSFSPNREEIIEFYHPLTILLGDNGCGKTTVIECLKLACTGGLPPGARS--GQSLIHDPKIAGTNEVKASIRLRFRNRAGKAMLVHRTYQVRQTKKTMN--FKALDGVIRVVNELGEK-VSLSHKCGELDQHIPDMLGVSKAILESVIFCHQEESNWPLREGAELKKRFDNIFESARYTKALEAIRKLKKARLENAKDYKRDLDVLTTHMKMAEEIRDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDVVMKEQSVRTAYSK--IENIMSDTDDELRGFLNDYDAIIEDHRRAFTRLQEQDEKLQKEQHKAKEDYVTLRDNKARVETNIDTYQKKVADLIDSASKLSTKYRFHLQPLSSQQEDISTFLAEFRNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEALNRDKKVI-ADRLRELGGA-------------------------------------GLHSQRDAEEMSSQVSEAERALEDYRAKHNVMALRDEIQGFNRQMSDINHVIEDLGQQISQLRIYARRNAEIEFQRSEYRKKQEIFQASLHEKVADIEEIFEGGEKPTDRSSLVSALRNIDD--------LIAERKHSLDTKRREQASAEQRLMENTTS------------SKLAEKELNSLRSKKNQLDRQHMTGLKELL----DKVIPGHDLKNAELGVKEAERAYADAKDKVVRRKNMVMFLNIYKKKGLKDHCCPLCERDMSPEEEQAFESIL-------SDKTDDGKVADKIKKAEDLEKSSLQTLTQIKEKMPSWRKWL-ELETAIPEKVTELEEIYAAQKALEVDVQDKKAVFDLAQEQFDAAKTAKSDMEILRKSADELHYSDVAITKEEERMRG-SQGSNGCSLSDVEAEKD---AKQAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKLRIETQRKEYDEAIXXXXXXXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXXXXAQRSELQERQGDFRVFSDKCKQVQ----HGELDRLEREVQTISDNIAQTKQREDRVVQALADLAPQMKSAEKNLSENEIVKRRIQDNLDYRELQKELAKMRAEVEDLKNHIGNLPSLDDVNDRVEAADAALTSAQRSAAMMVGKRQQLMEEIREQKIKLRVPTLKDVEEKYRHKLIQFETTQMAVTDLDRYFKALDESLLQYHSKKVDEINTIIRSLWQITYKGQDIDTIELVSGQQEGQVSKAARSYDYRVVMKKAGAAIDMRGRCSAGQKVLAALVIRLALAETFCLNCGILALDEPTTNLDTENKFGLAQAITDILNARSQQQNFQLVCITHDEEFVQMLSRTQAMEG--TRPEFYWRILREDIGGNRFVSKIERREW 1337
BLAST of NO04G00500 vs. NCBI_GenBank
Match: NP_565733.1 (DNA repair-recombination protein (RAD50) [Arabidopsis thaliana] >Q9SL02.2 RecName: Full=DNA repair protein RAD50; Short=AtRAD50 >AAF36810.1 DNA repair-recombination protein [Arabidopsis thaliana] >AAD15407.2 putative RAD50 DNA repair protein [Arabidopsis thaliana] >AAM98090.1 At2g31970/F22D22.28 [Arabidopsis thaliana] >AAO64758.1 At2g31970/F22D22.28 [Arabidopsis thaliana] >AEC08614.1 DNA repair-recombination protein (RAD50) [Arabidopsis thaliana]) HSP 1 Score: 387.1 bits (993), Expect = 2.400e-103 Identity = 374/1400 (26.71%), Postives = 647/1400 (46.21%), Query Frame = 0 Query: 39 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRREL-------ERKTAEIQEIQAKQDKVEERISTLQNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQEMTGQSDESLQKRLASFAKDQEEVQRELARLRQKEMTHKKAIDGYRAEVQKLVGRRGELKAQMKQLTQLVEDRNKDIVALCDKYALAQPRTLSGALSQVIRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPEVEMKRFLFDFQGKKEN-LTTELDAF--RTDKTRVLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAITNDLHGQAAVPASVLDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVELDSEQKVWESMKESSTERTEYEVNFRDYTNKMEELKAELARFNSSLYRPLVPQDLTPELDDIQQAVTHLNAILFPQHDAAARSQ--ARELTLARQRLTELATN---QSRDKQEQERYV-AKIGEMEKQSL-VEKARRILEQLQGEFEEKIRKNPEKYSYKFDDREIDEAVKEVEQVVKMDVANLHDLQSKLNFAAKVVKSSSESRVCECCTSSLSARAVKALEDNMGGFMARWEDKANRLREETLPMHEQYLRDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDMEAAKKKLDESKVQVVGISNACAELYKKKEELDFRQKRLQAYSVDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSLEAKLKTMSRS-QELEKEKAALKMRQGQVEAEVQQATEEEIPLRQELKGVQADFDALKSRLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVEQQQQQLEHDIQGMEGQLEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGEDGGGKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSRE 1421 M+ ++KM ++GIRSF P+++ + F+ PLT+IVG NG+GKTTIIECLK +CTG+LPP S G S+IHDPK+ +TE KA IKLRFK GK +V +RS QL K +K +E V++TINP T + L ++C D++ +P G+S AILE+V+F HQ+ES+WPLQD +TLKKKFDDIF +TRYTKALE I+K K +A+E K KL L L ++ A +R + E ++ E++ KV+ + + + T E + ++RLA +++RE+ + A Y E+ KL + E +A M L +R+ I + Y L + + V+ + L E+EM L D + E L+T D + D+ + + XXXXXXX ++D+ + D+E +V S+K +TE E + + ++E K + R ++ L PE D ++ V L +I D + +S+ +E+ + + ++ E+ + ++D + ++RY+ +K+ ++++S+ ++ ++LE + + +++ R+ + ++ ++ + + D ++ +V SS+ + S +A +V D + ++ ++L E +P+ E + LQ T ++ + + + + ++K ++ + AL + + +++ + +K++++ + YK LDFR ++ +EE+++ L +L++++ + + L++++ +Q +R I+ A +AK + R + E++ L + Q++ +V+ TE PL +E + + +D++ +K R + E + ++ Q + K+ E + G L ++++Q+ + +Q E + E+ ++ + ++DQ RR IEDNL YR +A+V++ E+ L+ Q+ I +TT +A +DL +Y+ ALD+ALM++H MK+EEINKIIRELW +TY+G D++ I I S +G G TRSY+Y+V+M+ G T L+MRGRCSAGQ+VLAS++IRLALAE FC+NCG++ LDEPTTNLD N LAGA+ R++ +R Q+NFQLIVITHDE F M+ Q E Y+RV+++ Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVVTFFRPLTLIVGANGAGKTTIIECLKVSCTGELPPNARS--GHSFIHDPKVAGETETKAQIKLRFKTAAGKDVVCIRSFQLTQKASKME--YKAIESVLQTINPHTGEKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFKLKLENLQTLKDAAYKLRESIAQDQERTESSKVQMLELETSVQKVDAEVHNKEMMLK--DLRKLQDQVSIKTAERSTLFKEQQRQYAALPEENEDTIEELKEWKSKFEERLALLGTKIRKMEREMVDTETTISSLHNAKTNYMLEISKL---QTEAEAHM----LLKNERDSTIQNIFFHYNLGNVPSTPFSTEVVLNL-----------------------TNRIKSRLGELEMD--LLDKKKSNETALSTAWDCYMDANDRWKSIEAQKRAKDEIKMGISKRIEEKEIERDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRERDV----MAGDAEDRVKLSLK-----KTEQENLKKKHKKIIDECKDRI--------RGVLKGRLPPEKDMKREIVQALRSIEREYDDLSLKSREAEKEVNMLQMKIQEVNNSLFKHNKDTESRKRYIESKLQALKQESVTIDAYPKLLESAKDKRDDRKREYNMANGMRQMFEPFEKRARQEHSCPCCERSFTADEEASFIKKQRVKASSTGEHLKALAVESSNADSVFQQLDKLRAVF----EEYSKLTTEIIPLAE---KTLQEHTEELGQKSEALDDVLGISAQIKADKDSIEALVQPLENADRIFQEIVSYQKQIEDLE-------------YK----LDFRGLGVKT---------MEEIQSELSSLQSSKDKLHGELEKLRDDQI-YMERDISCLQARWHAVREEKAKAANLLRDVTKAEEDLERLAEEKSQLDLDVKYLTEALGPLSKEKEQLLSDYNDMKIRRNQEYEELAEKKRNYQQEVEALLKASYKINEYHDLKKGERLDDIQEKQRLSDSQLQSCEARKNELAGELNRNKDLMRNQDQLRRNIEDNLNYRTTKAKVEELTREIESLEEQILNIGGIAAVEAEIVKILRERERLLSELNRCRGTVSVYESSISKNRVELKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDMDYIRIHSDSEGAG--TRSYSYKVLMQTGDTELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNSESLAGALLRIMEDRKGQENFQLIVITHDERFAQMIGQR-------QHAEKYYRVAKD 1302
BLAST of NO04G00500 vs. NCBI_GenBank
Match: XP_010414056.1 (PREDICTED: DNA repair protein RAD50 isoform X1 [Camelina sativa]) HSP 1 Score: 387.1 bits (993), Expect = 2.400e-103 Identity = 384/1414 (27.16%), Postives = 648/1414 (45.83%), Query Frame = 0 Query: 39 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKK-------SESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRREL-------ERKTAEIQEIQAKQDKVEERISTLQNRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTQEMTGQSDESLQKRLASFAKDQEEVQRELARLRQKEMTHKKAIDGYRAEVQKLVGRRGELKAQMKQLTQLVEDRNKDIVALCDKYAL----AQPRTLSGALSQVIRVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPEVEMKRFLFDFQGKKEN-LTTELDAFRTDKTRVLNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAAITNDLHGQAAVPASVLDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVELDSEQKVWESMKESSTERTEYEVNFRDYTNK-MEELKAELARFNSSLYRPLVPQDLTPELDDIQQAVTHLNAI--LFPQHDAAARSQARELTLARQRLTELATN---QSRDKQEQERYV-AKIGEMEKQSL-VEKARRILEQLQGEFEEKIRKNPEKYSYKFDDREIDEAVKEVEQVVKM----DVANLHDLQSKLNFAAKVVKSSSESRVCECCTSSLSARAVKALEDNMGGFMARWEDKANRLREETLPMHEQYLRDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDMEAAKKKLDESKVQVVGISNACAELYKKKEELDFRQKRLQAYSVDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSLEAKLKTMSRS-QELEKEKAALKMRQGQVEAEVQQATEEEIPLRQELKGVQADFDALKSRLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVEQQQQQLEHDIQGMEGQLEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGEDGGGKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSRE 1421 M+ ++KM ++GIRSF P+++ + F+ PLT+IVG NG+GKTTIIECLK +CTG+LPP S G S+IHDPK+ +TE KA IKLRFK GK +V +RS QL K +K +E V++TINP T + L ++C D++ +P G+S AILE+V+F HQ+ES+WPLQD +TLKKKFDDIF +TRYTKALE I+K K +A+E K KL L L ++ A +R + E ++ E++ KV+ + + + T E + ++R+A +++RE+ + + A Y E+ KL + E +A M L +R+ I + ++ L + P + LS R+ L E+EM L D + E L+T D + R + + IK L ++ R+V D+E +V S++++ E N + K ++E K + R ++ L PE D ++ V L +I + + +R +E+ + + ++ E+ + +D + ++RY+ +K+ ++++S+ ++ ++LE +EK ++ KY+ RE+ E +E+ + + + D + + SS+ + S +A +V D + ++ ++L E +P+ E+ L++ D K+ A L + LG + ++K ++ + AL + + +++ + +K++++ + YK LDFR ++ +EE+++ L +L++++ + L++++ EQ +R I+ A +AK + R + E++ L + Q++ +V+ TE PL +E + + +D++ +K R + E + ++ Q + K+ E + G L ++++Q+ E +Q E + E+ ++ + ++DQ RR IEDNL YR +AEV+K E+ L+ Q+ I +TT +A +DL +Y+ ALD+ALM++H MK+EEINKIIRELW +TY+G D++ I I S +G G TRSY+Y+V+M+ G T L+MRGRCSAGQ+VLAS++IRLALAE FC+NCG++ LDEPTTNLD N LAGA+ R++ +R Q+NFQLIVITHDE F M+ Q E Y+RV+++ Sbjct: 1 MSTVDKMLIKGIRSFDPENKNVVTFFRPLTLIVGANGAGKTTIIECLKVSCTGELPPNARS--GHSFIHDPKVAGETETKAQIKLRFKTAAGKDVVCIRSFQLTQKASKME--YKAIESVLQTINPHTGEVALLFSYKVCLSYRCADMDREIPALMGVSKAILENVIFVHQDESNWPLQDPSTLKKKFDDIFSATRYTKALEVIKKLHKDQAQEIKTFKLKLENLQTLKDAAYKLRESIAQDQERTESSKVQMLELETSIQKVDAEVHNKEMMLK--DLRKLQDQVSRKTAERSTLFKEQQRQYAALPEENEDTIEELKEWKSKFEERIALLETKIRKMEREMDDTQTTISSLHNAKTNYMLEISKL---QTEAEAHM----LLKNERDSTIQNIFSRHNLGNVPSTPFSPEVVLSLTNRI---------------------------KSRLGELEMD--LLDKKKSNETALSTAWDCYMDANDRWKSIEAQKRAKDEIKMGISKRIEEKENERDTFEFEISSVDVKQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKTLNRE-RDVMAG-DAEDRVKLSLRKTEQE------NLKKKNKKIIDECKDRI--------RVVLKGRLPPEKDMKKEIVQALRSIEREYSELSLKSREAEKEVNMLQMKIQEVNNSLFKHKKDTESRKRYIESKLQALKQESVTIDAYPKLLESA----KEKRDEHKRKYNMATGMREMFEPFEEIARSRHLCPCCERTFTSDEEDSFVKKQRANASSTVGHLKMLAVESSNADSVFQQLDKLRAVF----EEYSKLTSEVIPLAEKTLQE-HTEELDQKSQA-LDDVLG-ISAQIKADKDAIEALVQPLENTDRIFQEIVSYQKQIEDLE-------------YK----LDFRGLGVKT---------MEEIQSELNSLQSSKDILHDELEKLRDEQI-YMERDISCLQARWHAVREEKAKAANLLRDVTKAEEDLERLAEEKSQLDLDVKYLTEALGPLSKEKEQLLSDYNDMKVRRNQEYEELAEKKRNYQQEVEALLKASSKINEYHELKKGERLNDIQEKQRLSETQLQSCEARKNELAGELNRNKDLMRNQDQLRRNIEDNLNYRTTKAEVEKLTREIESLEEQILNIGGIPAVEAEMVKISRERERLLSELNRCRGTVSVYESSISKNRVELKQAQYKDIDKRHFDQLIQLKTTEMANKDLDRYYNALDKALMRFHTMKMEEINKIIRELWQQTYRGQDMDYIRIHSDSEGAG--TRSYSYKVLMQTGDTELEMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDGPNSESLAGALLRIMEDRKGQENFQLIVITHDERFAQMIGQR-------QHAEKYYRVAKD 1309 The following BLAST results are available for this feature:
BLAST of NO04G00500 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO04G00500 ID=NO04G00500|Name=NO04G00500|organism=Nannochloropsis oceanica|type=gene|length=5794bpback to top protein sequence of NO04G00500.1 >NO04G00500.1-protein ID=NO04G00500.1-protein|Name=NO04G00500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1402bpback to top protein sequence of NO04G00500.2 >NO04G00500.2-protein ID=NO04G00500.2-protein|Name=NO04G00500.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1440bpback to top Synonyms
Publications
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