|
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr4 | genome | chr4:184081..189874 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO04G00500.2 vs.
Match: EWM28490.1 (dna repair protein rad50 [Nannochloropsis gaditana]) HSP 1 Score: 1819.3 bits (4711), Expect = 0.000e+0 Identity = 989/1401 (70.59%), Postives = 1143/1401 (81.58%), Query Frame = 0
Query: 39 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTAGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFCHQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLKLDLAALAENRETASDIRRELERKTAEIQEIQAKQDKVEERISTLQNRAREASRELAEFNEVAQVIEKKAMLVDEKKRGVVEKKRSLGTQEMTGQSDESLQKRLASFAKDQEEVQRELARLRQKEMTHKKAIDGYRAEVQKLVGRRGELKAQMKQLTQLVEDRNKDIVALCDKYALAQPRTLSGALSQVIRVGGGGGGGERSASASASPAGVKDSHSHMAVELPEVEMKRFLFDFQGKKENLTTELDAFRTDKTRVLNKKRGEMTELEATLLANETAKRARQAEMKEIEAKFAAITNDLHGQAAVPASVLDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVAVELDSEQKVWESMKESSTERTEYEVNFRDYTNKMEELKAELARFNSSLYRPLVPQDLTPELDDIQQAVTHLNAILFPQHDAAARSQARELTLARQRLTELATNQSRDKQEQERYVAKIGEMEKQSLVEKARRILEQLQGEFEEKIRKNPEKYSYKFDDREIDEAVKEVEQVVKMDVANLHDLQSKLNFAAKVVKSSSESRVCECCTSSLSARAVKALEDNMGGFMARWEDKANRLREETLPMHEQYLRDLQACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDMEAAKKKLDESKVQVVGISNACAELYKKKEELDFRQKRLQAYSVDGDSRGLEEVETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSLEAKLKTMSRSQELEKEKAALKMRQGQVEAEVQQATEEEIPLRQELKGVQADFDALKSRLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVEQQQQQLEHDIQGMEGQLEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRMQAEVKKAEEEMVELQGQLEGFEEKGELARKVEKIQQQWREARETKVRHEARIDTLAAVQQEQQAKLGSSKFQNIEQRYRDTKITAETTNLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGEDGGGKATRSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMTLDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQELSTQAGVSMPEYYWRVSREPAPGGRAYSTIQVCEWGTI 1440
MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGAST+GQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLN FVPQAT IS AILESVVFCHQEESSWPLQDGATLKKKFDDIFES RYTKALEAIEKCRK RAEE KNL+LDLAAL ENRETASDI ELERKTAEIQ+IQAKQ+ VE+RI+TLQ R R+A L E V Q + K MLV+E+ R V EKK+SLG QEM G++DESLQ RL SFAK+ E+VQREL RLRQKE THKKA + YRAE+Q++VG+RGELKAQM Q+ QL+ DRN++IVA+CD YAL PRTL+G LSQ G ER G + SH+A ELP VE KRFL DFQGK+E L+ EL+AF+T+K+R L +KR EMTELEA LLANE+ K ARQAEMK IE KF ITN+LH QAAVPASVL +M+QEV +A+A+Y + K + MEFEKT+K L+K LREVAVELD EQKVWESMKE+S ERTEY+VN RD+T+KME L+AE+ARFNSS+YRP + DL P+L+ +QQAVT LNA L P H A ++QA L ARQ LTE+ TNQ+RDK+E + Y A+I +EK+S VEKAR ILE LQ EF EKIRKNPEKY Y+FDDR+I+ A++EV+ VV D+ + H+ ++K F ++ S E+ C CCT+ L A+ V+ LE+++ + +W DK +L E +LP H+Q L DL+AC +D+K + LR L EVE R+K A EQ A +V LEE + E KK ++E QV G+S+ CAELYKK+EELDF++KRLQ YSVDGD R LE VE SLK+LRATQ E NR LQE QAEQSKA+KR+INQA+LVRAAET+LE K+K MSRSQELE+EK LK RQ +VEAEV+ ATEEEIPLRQ LK QADF+ LK RLDAE+AD+QR+ IEC QRYQ F+ALQ K+++ E LG L +E Q +L+ D+QG+EGQLEE+ PQ+QVVA R E KDQ RRQIEDN+TYRRM +E++K +EE+ L+ +++ EEK L R ++K+Q Q+R+ARE K+R+EARIDTL AVQQEQQAKL S K +NIE+R+R+ KI AETT LAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTY+GNDIEEIAIVSGEDGGG+ATRSYNYRVVMKKG TLLDMRGRCSAGQRVLASIVIRLALAE FCI+CGVMTLDEPTTNLDHENK GLAGAIARLIAER RQQNFQLIVITHDEDFVDMVKQELSTQ G SMPEYYWR+SREPAPGGRAYSTIQ CEWGTI
Sbjct: 1 MAGLEKMALRGIRSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGASTSGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNPTFKQLEGVIKTINPVTKKSESLGHKCQDLNAFVPQATDISAAILESVVFCHQEESSWPLQDGATLKKKFDDIFESARYTKALEAIEKCRKGRAEELKNLRLDLAALTENRETASDIHHELERKTAEIQDIQAKQETVEDRINTLQARLRQAEEALVEVKGVLQALGTKEMLVEERTRAVAEKKKSLGCQEMEGETDESLQARLVSFAKEHEDVQRELTRLRQKETTHKKATENYRAEMQRMVGQRGELKAQMGQVQQLMADRNREIVAMCDAYALPLPRTLAGTLSQA-------SGTERG------DVGNRAIMSHVAAELPVVETKRFLSDFQGKQETLSRELEAFKTEKSRCLTRKRAEMTELEAKLLANESGKTARQAEMKNIEEKFTEITNELHRQAAVPASVLSSMQQEVERARADYEVVAAKGRGMEFEKTVKNLEKTLREVAVELDGEQKVWESMKENSKERTEYDVNQRDHTSKMERLEAEVARFNSSMYRPFLSHDLAPDLNTMQQAVTELNAKLIPTHATAVKTQADALVQARQELTEIGTNQARDKREADMYAAEIDGLEKRSAVEKARHILEALQEEFAEKIRKNPEKYPYRFDDRDIEGALREVQAVVDTDIRSSHEFRTKKGFCELLIDQSKEANTCMCCTTPLDAKGVELLEESLATGIRKWTDKVQKL-EVSLPRHQQQLADLRACATDVKELIPLRAKLCEVEERMKLANEQNAKWRASVRSLEEEMVKKERQKKNVEECLSQVTGMSSTCAELYKKREELDFKRKRLQTYSVDGDERDLEAVEASLKSLRATQTETNRHLQETQAEQSKAAKRMINQAELVRAAETALEEKVKMMSRSQELEQEKTRLKARQCEVEAEVKLATEEEIPLRQALKQYQADFETLKVRLDAEEADKQRKVIECMQRYQGFDALQCKLQDWEKKALGTQLVELEAAQARLKQDLQGVEGQLEEIAPQIQVVANRSEGKDQLRRQIEDNVTYRRMLSELEKEKEELAMLRKRVDENEEKEALERALDKVQNQYRDAREMKIRNEARIDTLTAVQQEQQAKLRSDKLKNIEKRFRNVKIMAETTMLAVEDLQKYHKALDRALMQYHKMKIEEINKIIRELWTRTYRGNDIEEIAIVSGEDGGGRATRSYNYRVVMKKGATLLDMRGRCSAGQRVLASIVIRLALAETFCISCGVMTLDEPTTNLDHENKEGLAGAIARLIAERSRQQNFQLIVITHDEDFVDMVKQELSTQTGFSMPEYYWRISREPAPGGRAYSTIQACEWGTI 1387
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO04G00500.2 ID=NO04G00500.2|Name=NO04G00500.2|organism=Nannochloropsis oceanica|type=mRNA|length=5229bp AGATAGTGGGCTTTGGCTTGAGCTATGGAAGGAGGGGGCAGGAGGTAAGG GCGAGGCTATGTGATCGAAAAATGATTTAATCTATCTTGTCCTTGGCTTT TGAGCCTGCTCGCCCGGCAAAGAAAAAGCAAAAGTATGAGAACGTAAGAT GTTTGACTGTGACTGTGAGGACAGCATTGTGTGCGTGGGCGTGTGTGGCT TGGATTTTGAGCAGCAACATCTCGCTAACGCCCGCGGCGAGTCTTCGTCG TTTTTCCAGGCCGCCTCCGTGCACAACACATTTTCCAGCACATAACACAC AGGCACATAGCGGCTTCAAGAGGATGGCAAAAAGTCGCACGTTCTTGTGT TGACGCAATACGCTATAAAGTAAGGCGCGCCCGTCGATTGTTGTAGGAAG CGAGGCGAGTTGGCACGATAGCAAGTCAGCCATGTCCATGGATAACGCAT GACCCCTCACGTCCAGTACCCTCTGCGCGTTGTTTGGGACATCGACTTCT TCACAGGTCCATCTCTTCAACGCCTTGAAACACGTCATCAACCCACTCCC TCAACCAGCACAATGGCGGGCCTGGAAAAAATGGCCCTCCGGGGCATCCG TTCTTTTTCTCCGGATGACGAGCAGACCATCGAATTCTATAGCCCACTGA CGATGATTGTGGGGCAGAATGGTTCGGGGAAGACTACCATTATCGAGTGT CTCAAGTATGCCTGCACGGGCAAGCTTCCTCCCGGGGGGGCATCCACGGC CGGACAGAGCTGGATCCACGACCCAAAGCTCACCGACGATACGGAGGTGA AGGCCTCGATCAAGCTGCGCTTCAAGGCCCGAGATGGGAAAAGGATGGTG GTTGTCCGTTCCCTCCAACTTCAGTACAAAGGCAAGAGCAAGAACCCCAC CTTCAAGCAGCTCGAAGGCGTGATCAAGACCATCAACCCCGTCACCAAGA AATCGGAGTCCCTCGGCCACAAATGCCAAGATCTCAACACTTTCGTTCCT CAAGCCACGGGTATCTCCACCGCCATCCTCGAAAGCGTTGTTTTCTGTCA CCAGGAAGAAAGCAGCTGGCCCTTACAAGACGGCGCTACGCTCAAGAAGA AATTCGACGACATTTTCGAGTCCACCCGTTACACAAAGGCCTTGGAAGCC ATTGAAAAATGCCGGAAAGTTCGGGCAGAAGAACACAAAAACCTCAAGTT GGACCTGGCGGCCCTTGCCGAGAATAGGGAGACGGCCAGTGACATACGCC GAGAACTCGAGAGGAAAACCGCGGAAATCCAAGAGATTCAAGCCAAGCAA GACAAGGTGGAAGAACGTATCAGCACCTTGCAGAACCGCGCACGGGAGGC CTCGAGGGAGTTGGCAGAATTCAACGAGGTGGCTCAGGTCATTGAAAAGA AGGCCATGTTGGTGGACGAAAAAAAGCGCGGTGTTGTGGAGAAGAAAAGA AGTTTGGGCACCCAAGAAATGACGGGGCAGAGCGACGAGTCCCTCCAGAA GCGCTTGGCTTCCTTTGCTAAGGACCAGGAGGAGGTGCAGCGGGAGTTGG CCCGGCTGCGACAAAAGGAGATGACGCACAAGAAGGCCATTGATGGGTAT AGGGCAGAAGTGCAGAAACTCGTTGGAAGACGGGGAGAGCTCAAGGCTCA AATGAAGCAGTTGACCCAGTTGGTCGAAGATAGGAACAAGGACATTGTGG CGTTATGTGATAAGTATGCCTTGGCCCAGCCGAGAACGTTGTCGGGGGCG CTGTCACAGGTGATTAGGGTGGGTGGTGGTGGAGGTGGGGGAGAAAGGTC TGCGTCGGCGTCGGCCTCGCCGGCGGGTGTGAAGGACTCACACTCTCATA TGGCGGTGGAGTTGCCGGAGGTGGAGATGAAGAGATTTTTGTTTGATTTC CAGGGGAAGAAAGAGAATTTGACTACGGAGTTGGACGCGTTTCGGACGGA CAAGACGCGGGTGTTGAACAAAAAGAGGGGGGAGATGACAGAGTTGGAAG CCACTTTGCTGGCGAACGAGACGGCCAAAAGGGCCAGGCAGGCGGAGATG AAGGAGATAGAGGCAAAGTTCGCCGCAATCACGAATGATTTACACGGGCA AGCAGCGGTCCCGGCGTCGGTTTTGGATGCTATGAGGCAAGAGGTGGCGA AAGCCAAGGCGGAATACACGGCCATGACCGAGAAAAGCAAAGAAATGGAA TTCGAAAAAACGATCAAATGCCTCCAGAAGGACTTAAGGGAGGTAGCCGT CGAATTAGATAGCGAACAGAAAGTCTGGGAGTCCATGAAAGAGAGCAGCA CTGAGCGGACGGAATACGAAGTCAACTTCCGAGACTACACGAACAAAATG GAAGAGCTAAAGGCAGAGCTCGCCCGCTTCAACAGCAGCCTCTACCGGCC CCTTGTCCCTCAAGACCTGACCCCCGAGCTCGATGACATTCAGCAGGCCG TGACGCACTTGAATGCGATACTTTTCCCCCAACACGACGCAGCCGCCAGA TCTCAAGCCCGTGAACTCACCCTTGCCCGTCAACGTCTCACCGAGCTGGC AACCAACCAATCAAGGGACAAGCAAGAACAAGAGCGGTACGTCGCCAAAA TAGGCGAGATGGAGAAGCAGAGCTTGGTGGAGAAGGCAAGGCGGATCCTG GAACAGCTGCAGGGGGAATTCGAGGAGAAGATTCGCAAGAATCCGGAGAA GTACTCGTACAAATTCGATGACCGAGAGATCGATGAGGCCGTGAAGGAGG TGGAGCAAGTGGTGAAGATGGACGTGGCAAATTTGCATGATTTACAGAGC AAGCTCAATTTTGCCGCAAAAGTTGTGAAGAGTAGTAGTGAGTCGAGGGT GTGTGAGTGCTGTACGAGCTCGTTGAGCGCCAGAGCCGTGAAAGCCCTCG AGGATAATATGGGAGGGTTTATGGCCAGGTGGGAGGACAAAGCCAACCGT CTACGGGAGGAGACTCTGCCCATGCACGAGCAATATCTACGAGACCTGCA GGCCTGCACCTCGGACATGAAGGCCATGGCTTCACTGAGGGAGGCATTGG GGGAGGTGGAAGGGAGGCTGAAGGGCGCGGAGGAGCAGGTAGCTGCGTTG GCGACGACGGTGCACGGGTTAGAGGAGGGGTTGCGAGATATGGAGGCGGC GAAGAAGAAGCTGGATGAGAGCAAGGTTCAGGTGGTAGGGATTAGCAATG CCTGCGCGGAATTGTACAAAAAGAAGGAGGAATTAGATTTTAGACAGAAG CGATTACAGGCGTATTCGGTGGATGGGGACTCTCGTGGGTTAGAGGAGGT GGAAACGAGCCTCAAAACCTTACGGGCGACGCAAGCGGAGGCAAATCGCC GCTTGCAGGAAATTCAGGCGGAGCAGAGCAAGGCGAGCAAACGGTTGATT AACCAGGCGGACCTCGTGAGGGCCGCCGAGACGTCGTTGGAAGCCAAGTT GAAGACAATGAGCCGGAGTCAGGAGCTGGAGAAAGAGAAGGCAGCACTCA AGATGAGACAGGGGCAGGTAGAGGCGGAGGTGCAGCAGGCAACGGAGGAA GAAATACCCCTGAGGCAGGAACTGAAGGGCGTGCAGGCCGACTTCGATGC GCTCAAGTCGAGGTTGGATGCAGAGGATGCGGACAGGCAGAGGCAGCGAA TTGAGTGCACCCAGCGGTACCAGGATTTCGAGGCGTTGCAGCGCAAGGTG AGGGAGATGGAGGGCATAGGACTGGGAGGGCTGCTGGCTGGGGTGGAGCA GCAGCAGCAGCAGCTAGAGCACGACATTCAAGGGATGGAGGGGCAGCTGG AGGAAATGGGGCCTCAAGTGCAGGTGGTCGCAAAGAGGCTGGAGGATAAG GACCAGACGAGGAGGCAGATCGAGGATAATTTGACGTATCGACGCATGCA GGCAGAGGTGAAGAAGGCGGAGGAGGAGATGGTGGAGTTGCAGGGGCAGT TGGAAGGCTTTGAGGAGAAGGGGGAGCTGGCAAGGAAGGTGGAGAAGATA CAGCAGCAGTGGCGCGAGGCGAGGGAGACGAAAGTGAGACACGAAGCCAG GATTGATACACTGGCGGCGGTCCAGCAGGAACAGCAGGCGAAGCTAGGCT CAAGCAAATTCCAGAATATCGAGCAAAGGTACAGAGACACTAAGATCACG GCTGAAACGACCAATCTCGCGGTGGAAGACTTGCAGAAGTATCATAAAGC CCTGGACCGCGCTTTGATGCAATACCACAAGATGAAGATAGAAGAGATCA ACAAGATCATCCGGGAGCTGTGGACACGCACGTATCAAGGCAACGACATC GAGGAAATTGCAATCGTGTCGGGGGAGGATGGGGGGGGAAAAGCGACACG CTCCTACAATTATCGAGTGGTGATGAAAAAGGGACAAACGTTGTTGGACA TGCGGGGGCGGTGTTCAGCGGGACAGAGGGTGCTGGCGAGCATTGTGATT CGCCTGGCCTTGGCCGAGGCGTTTTGCATCAATTGCGGGGTGATGACTTT GGATGAGCCGACGACGAATTTGGACCATGAGAATAAGGGAGGGCTGGCAG GAGCAATCGCGAGGTTGATTGCCGAGAGGGGCAGGCAGCAGAATTTTCAA TTGATTGTGATTACGCACGATGAGGACTTTGTGGATATGGTGAAGCAGGA GCTGAGCACGCAGGCGGGAGTTTCGATGCCGGAGTACTACTGGCGCGTTT CCCGGGAACCGGCACCTGGTGGACGGGCTTACTCCACCATCCAGGTCTGT GAGTGGGGCACCATCTAAGGTGGAGAAGGTAAAGGGAAAAAGAGGGAGGG AAAGAGTGAACAAATGAGGAGGGAAGGACAGACGGAGGGAAGAGTGTTTG TGCGTGGACAAGGGGGAGAGATGCAGGTGGCCGGGCCGGAAAGTCCGGCC CTGGGGCTGGAGATCAAGAAAGTTAGACACTCAGAGTCAATAGAAGCATA TGTACATAAGAAGGTTCCGAATGGCATAGGATCTTGGACCCGATATGTCT GTTATGAACAGTAGCATCAGAACTCAGAAAGCTCAGAAGGGATGGGAGCG TAGAGAGAGAGTGCGCGACAAGACAAGGATACAAATGAAAAACAAACCAC GATATTCAGCTCGTGATTTATTATTTTACCTCGTATGGACACCGCAATAC AATTACGTCGCTTGAGCTCGGGCTGGCAACAAATCCACTATAGCAAGGGT GGGGAGGTCGCCAAAGTGTCGAAGTAAAT back to topprotein sequence of NO04G00500.2 >NO04G00500.2-protein ID=NO04G00500.2-protein|Name=NO04G00500.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1440bp MTPHVQYPLRVVWDIDFFTGPSLQRLETRHQPTPSTSTMAGLEKMALRGI RSFSPDDEQTIEFYSPLTMIVGQNGSGKTTIIECLKYACTGKLPPGGAST AGQSWIHDPKLTDDTEVKASIKLRFKARDGKRMVVVRSLQLQYKGKSKNP TFKQLEGVIKTINPVTKKSESLGHKCQDLNTFVPQATGISTAILESVVFC HQEESSWPLQDGATLKKKFDDIFESTRYTKALEAIEKCRKVRAEEHKNLK LDLAALAENRETASDIRRELERKTAEIQEIQAKQDKVEERISTLQNRARE ASRELAEFNEVAQVIEKKAMLVDEKKRGVVEKKRSLGTQEMTGQSDESLQ KRLASFAKDQEEVQRELARLRQKEMTHKKAIDGYRAEVQKLVGRRGELKA QMKQLTQLVEDRNKDIVALCDKYALAQPRTLSGALSQVIRVGGGGGGGER SASASASPAGVKDSHSHMAVELPEVEMKRFLFDFQGKKENLTTELDAFRT DKTRVLNKKRGEMTELEATLLANETAKRARQAEMKEIEAKFAAITNDLHG QAAVPASVLDAMRQEVAKAKAEYTAMTEKSKEMEFEKTIKCLQKDLREVA VELDSEQKVWESMKESSTERTEYEVNFRDYTNKMEELKAELARFNSSLYR PLVPQDLTPELDDIQQAVTHLNAILFPQHDAAARSQARELTLARQRLTEL ATNQSRDKQEQERYVAKIGEMEKQSLVEKARRILEQLQGEFEEKIRKNPE KYSYKFDDREIDEAVKEVEQVVKMDVANLHDLQSKLNFAAKVVKSSSESR VCECCTSSLSARAVKALEDNMGGFMARWEDKANRLREETLPMHEQYLRDL QACTSDMKAMASLREALGEVEGRLKGAEEQVAALATTVHGLEEGLRDMEA AKKKLDESKVQVVGISNACAELYKKKEELDFRQKRLQAYSVDGDSRGLEE VETSLKTLRATQAEANRRLQEIQAEQSKASKRLINQADLVRAAETSLEAK LKTMSRSQELEKEKAALKMRQGQVEAEVQQATEEEIPLRQELKGVQADFD ALKSRLDAEDADRQRQRIECTQRYQDFEALQRKVREMEGIGLGGLLAGVE QQQQQLEHDIQGMEGQLEEMGPQVQVVAKRLEDKDQTRRQIEDNLTYRRM QAEVKKAEEEMVELQGQLEGFEEKGELARKVEKIQQQWREARETKVRHEA RIDTLAAVQQEQQAKLGSSKFQNIEQRYRDTKITAETTNLAVEDLQKYHK ALDRALMQYHKMKIEEINKIIRELWTRTYQGNDIEEIAIVSGEDGGGKAT RSYNYRVVMKKGQTLLDMRGRCSAGQRVLASIVIRLALAEAFCINCGVMT LDEPTTNLDHENKGGLAGAIARLIAERGRQQNFQLIVITHDEDFVDMVKQ ELSTQAGVSMPEYYWRVSREPAPGGRAYSTIQVCEWGTI* back to topmRNA from alignment at chr4:184081..189874+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO04G00500.2 ID=NO04G00500.2|Name=NO04G00500.2|organism=Nannochloropsis oceanica|type=mRNA|length=5794bp|location=Sequence derived from alignment at chr4:184081..189874+ (Nannochloropsis oceanica) AGATAGTGGGCTTTGGCTTGAGCTATGGAAGGAGGGGGCAGGAGGTAAGG
GCGAGGCTATGTGATCGAAAAATGATTTAATCTATCTTGTCCTTGGCTTT
TGAGCCTGCTCGCCCGGCAAAGAAAAAGCAAAAGTATGAGAACGTAAGAT
GTTTGACTGTGACTGTGAGGACAGCATTGTGTGCGTGGGCGTGTGTGGCT
TGGATTTTGAGCAGCAACATCTCGCTAACGCCCGCGGCGAGTCTTCGTCG
TTTTTCCAGGCCGCCTCCGTGCACAACACATTTTCCAGCACATAACACAC
AGGCACATAGCGGCTTCAAGAGGATGGCAAAAAGTCGCACGTTCTTGTGT
TGACGCAATACGCTATAAAGTAAGGCGCGCCCGTCGATTGTTGTAGGAAG
CGAGGCGAGTTGGCACGATAGCAAGTCAGCCATGTCCATGGATAACGCAT
GACCCCTCACGTCCAGTACCCTCTGCGCGTTGTTTGGTAAGCTGCCGCTT
TGTTGTGTTTCAGGCGGACAGGCGACGTGGTTGATGTTTCCCCTTCGACT
GGGGCTTCTTCCTCGCAGCAGCGGTAGACCACCATACACACACGCAACAT
GGCATGGTGCACAGTGTTGGGTGTTGCCACTCGTCGCTCCCATATATTTG
CAAATGCCCACGAATCCCCTTGTCTGATCACCCCACATACAGGGACATCG
ACTTCTTCACAGGTCCATCTCTTCAACGCCTTGAAACACGTCATCAACCC
ACTCCCTCAACCAGCACAATGGCGGGCCTGGAAAAAATGGCCCTCCGGGG
CATCCGTTCTTTTTCTCCGGATGACGAGCAGACCATCGAATTCTATAGCC
CACTGACGATGATTGTGGGGCAGAATGGTTCGGGGAAGACTACCATTATC
GAGTGTCTCAAGTATGCCTGCACGGGCAAGCTTCCTCCCGGGGGGGCATC
CACGGCCGGACAGAGCTGGATCCACGACCCAAAGCTCACCGACGATACGG
AGGTGAAGGCCTCGATCAAGCTGCGCTTCAAGGCCCGAGATGGGAAAAGG
ATGGTGGTTGTCCGTTCCCTCCAACTTCAGTACAAAGGCAAGAGCAAGAA
CCCCACCTTCAAGCAGCTCGAAGGCGTGATCAAGACCATCAACCCCGTCA
CCAAGAAATCGGAGTCCCTCGGCCACAAATGCCAAGATCTCAACACTTTC
GTTCCTCAAGCCACGGGTATCTCCACCGCCATCCTCGAAAGCGTTGTTTT
CTGTCACCAGGAAGAAAGCAGCTGGCCCTTACAAGACGGCGCTACGCTCA
AGAAGAAATTCGACGACATTTTCGAGTCCACCCGTTACACAAAGGCCTTG
GAAGCCATTGAAAAATGCCGGAAAGTTCGGGCAGAAGAACACAAAAACCT
CAAGTTGGACCTGGCGGCCCTTGCCGAGAATAGGGAGACGGCCAGTGACA
TACGCCGAGAACTCGAGAGGAAAACCGCGGAAATCCAAGAGATTCAAGCC
AAGCAAGACAAGGTGGAAGAACGTATCAGCACCTTGCAGAACCGCGCACG
GGAGGCCTCGAGGGAGTTGGCAGAATTCAACGAGGTGGCTCAGGTCATTG
AAAAGAAGGCCATGTTGGTGGACGAAAAAAAGCGCGGTGTTGTGGAGAAG
AAAAGAAGTTTGGGCACCCAAGAAATGACGGGGCAGAGCGACGAGTCCCT
CCAGAAGCGCTTGGCTTCCTTTGCTAAGGACCAGGAGGAGGTGCAGCGGG
AGTTGGCCCGGCTGCGACAAAAGGAGATGACGCACAAGAAGGCCATTGAT
GGGTATAGGGCAGAAGTGCAGAAACTCGTTGGAAGACGGGGAGAGCTCAA
GGCTCAAATGAAGCAGTTGACCCAGTTGGTCGAAGATAGGAACAAGGACA
TTGTGGCGTTATGTGATAAGTATGCCTTGGCCCAGCCGAGAACGTTGTCG
GGGGCGCTGTCACAGGTGATTAGGGTGGGTGGTGGTGGAGGTGGGGGAGA
AAGGTCTGCGTCGGCGTCGGCCTCGCCGGCGGGTGTGAAGGACTCACACT
CTCATATGGCGGTGGAGTTGCCGGAGGTGGAGATGAAGAGATTTTTGTTT
GATTTCCAGGGGAAGAAAGAGAATTTGACTACGGAGTTGGACGCGTTTCG
GACGGACAAGACGCGGGTGTTGAACAAAAAGAGGGGGGAGATGACAGAGT
TGGAAGCCACTTTGCTGGCGAACGAGACGGCCAAAAGGGCCAGGCAGGCG
GAGATGAAGGAGATAGAGGCAAAGTTCGCCGCAATCACGAATGATTTACA
CGGGCAAGCAGCGGTCCCGGCGTCGGTTTTGGATGCTATGAGGCAAGAGG
TGGCGAAAGCCAAGGCGGAATACACGGCCATGACCGAGAAAAGCAAAGAA
ATGGAATTCGAAAAAACGATCAAATGCCTCCAGAAGGACTTAAGGGAGGT
AGCCGTCGAATTAGATAGCGAACAGAAAGTCTGGGAGTCCATGAAAGAGA
GCAGCACTGAGCGGACGGAATACGAAGTCAACTTCCGAGACTACACGAAC
AAAATGGAAGAGCTAAAGGCAGAGCTCGCCCGCTTCAACAGCAGCCTCTA
CCGGCCCCTTGTCCCTCAAGACCTGACCCCCGAGCTCGATGACATTCAGC
AGGCCGTGACGCACTTGAATGCGATACTTTTCCCCCAACACGACGCAGCC
GCCAGATCTCAAGCCCGTGAACTCACCCTTGCCCGTCAACGTCTCACCGA
GCTGGCAACCAACCAATCAAGGGACAAGCAAGAACAAGAGCGGTACGTCG
CCAAAATAGGCGAGATGGAGAAGCAGAGCTTGGTGGAGAAGGCAAGGCGG
ATCCTGGAACAGCTGCAGGGGGAATTCGAGGAGAAGATTCGCAAGAATCC
GGAGAAGTACTCGTACAAATTCGATGACCGAGAGATCGATGAGGCCGTGA
AGGAGGTGGAGCAAGTGGTGAAGATGGACGTGGCAAATTTGCATGATTTA
CAGAGCAAGCTCAATTTTGCCGCAAAAGTTGTGAAGAGTAGTAGTGAGTC
GAGGGTGTGTGAGTGCTGTACGAGCTCGTTGAGCGCCAGAGCCGTGAAAG
CCCTCGAGGATAATATGGGAGGGTTTATGGCCAGGTGGGAGGACAAAGCC
AACCGTCTACGGGAGGAGACTCTGCCCATGCACGAGCAATATCTACGAGA
CCTGCAGGCCTGCACCTCGGACATGAAGGCCATGGCTTCACTGAGGGAGG
CATTGGGGGAGGTGGAAGGGAGGCTGAAGGGCGCGGAGGAGCAGGTAGCT
GCGTTGGCGACGACGGTGCACGGGTTAGAGGAGGGGTTGCGAGATATGGA
GGCGGCGAAGAAGAAGCTGGATGAGAGCAAGGTTCAGGTGGTAGGGATTA
GCAATGCCTGCGCGGAATTGTACAAAAAGAAGGAGGAATTAGATTTTAGA
CAGAAGCGATTACAGGCGTATTCGGTGGATGGGGACTCTCGTGGGTTAGA
GGAGGTGGAAACGAGCCTCAAAACCTTACGGGCGACGCAAGCGGAGGCAA
ATCGCCGCTTGCAGGAAATTCAGGCGGAGCAGAGCAAGGCGAGCAAACGG
TTGATTAACCAGGCGGACCTCGTGAGGGCCGCCGAGACGTCGTTGGAAGC
CAAGTTGAAGACAATGAGCCGGAGTCAGGAGCTGGAGAAAGAGAAGGCAG
CACTCAAGATGAGACAGGGGCAGGTAGAGGCGGAGGTGCAGCAGGCAACG
GAGGAAGAAATACCCCTGAGGCAGGAACTGAAGGGCGTGCAGGCCGACTT
CGATGCGCTCAAGTCGAGGTTGGATGCAGAGGATGCGGACAGGCAGAGGC
AGCGAATTGAGTGCACCCAGCGGTACCAGGATTTCGAGGCGTTGCAGCGC
AAGGTGAGGGAGATGGAGGGCATAGGACTGGGAGGGCTGCTGGCTGGGGT
GGAGCAGCAGCAGCAGCAGCTAGAGCACGACATTCAAGGGATGGAGGGGC
AGCTGGAGGAAATGGGGCCTCAAGTGCAGGTGGTCGCAAAGAGGCTGGAG
GATAAGGACCAGACGAGGAGGCAGATCGAGGATAATTTGACGTATCGACG
CATGCAGGCAGAGGTGAAGAAGGCGGAGGAGGAGATGGTGGAGTTGCAGG
GGCAGTTGGAAGGCTTTGAGGAGAAGGGGGAGCTGGCAAGGAAGGTGGAG
AAGATACAGCAGCAGTGGCGCGAGGCGAGGGAGACGAAAGTGAGACACGA
AGCCAGGATTGATACACTGGCGGCGGTCCAGCAGGAACAGCAGGCGAAGC
TAGGCTCAAGCAAATTCCAGAATATCGAGCAAAGGTACAGAGACACTAAG
ATCACGGCTGAAACGACCAATCTCGCGGTGGAAGACTTGCAGAAGTATCA
TAAAGTATGTCCATCCCTCCCTCTCTCCCTACCTCTCCCCCTCCCCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCTCCCCCCTTC
TCTTCCCATTCCTCCATCAATTTGCACTTTTCCTCCTCCCTTCCCTACTC
CTCTCCCCTCCTCACCATCCCTCCCTGTCTGCTGTCCTACCCATTCCTCC
AGGCCCTGGACCGCGCTTTGATGCAATACCACAAGATGAAGATAGAAGAG
ATCAACAAGATCATCCGGGAGCTGTGGACACGCACGTATCAAGGCAACGA
CATCGAGGAAATTGCAATCGTGTCGGGGGAGGATGGGGGGGGAAAAGCGA
CACGCTCCTACAATTATCGAGTGGTGATGAAAAAGGGACAAACGTTGTTG
GACATGCGGGGGCGGTGTTCAGCGGGACAGAGGGTGCTGGCGAGCATTGT
GATTCGCCTGGCCTTGGCCGAGGCGTTTTGCATCAATTGCGGGGTGATGA
CTTTGGATGAGCCGACGACGAATTTGGACCATGAGAATAAGGGAGGGCTG
GCAGGAGCAATCGCGAGGTTGATTGCCGAGAGGGGCAGGCAGCAGAATTT
TCAATTGATTGTGATTACGCACGATGAGGACTTTGTGGATATGGTGAAGC
AGGAGCTGAGCACGCAGGTATGGCAGGGAGGGAGGGAGGGAGGGAGGAGT
GTAGACACTGCTTTTCTGCTGTTTCCTTCTTCCACACCAAGAATCACTTT
CCCAAAAAGTCATTTACATAAGATCCCTTTCTACATATCCCCCTCCTTTT
TCTTCCCTCGAATCTGACAACCGTACAGGCGGGAGTTTCGATGCCGGAGT
ACTACTGGCGCGTTTCCCGGGAACCGGCACCTGGTGGACGGGCTTACTCC
ACCATCCAGGTCTGTGAGTGGGGCACCATCTAAGGTGGAGAAGGTAAAGG
GAAAAAGAGGGAGGGAAAGAGTGAACAAATGAGGAGGGAAGGACAGACGG
AGGGAAGAGTGTTTGTGCGTGGACAAGGGGGAGAGATGCAGGTGGCCGGG
CCGGAAAGTCCGGCCCTGGGGCTGGAGATCAAGAAAGTTAGACACTCAGA
GTCAATAGAAGCATATGTACATAAGAAGGTTCCGAATGGCATAGGATCTT
GGACCCGATATGTCTGTTATGAACAGTAGCATCAGAACTCAGAAAGCTCA
GAAGGGATGGGAGCGTAGAGAGAGAGTGCGCGACAAGACAAGGATACAAA
TGAAAAACAAACCACGATATTCAGCTCGTGATTTATTATTTTACCTCGTA
TGGACACCGCAATACAATTACGTCGCTTGAGCTCGGGCTGGCAACAAATC
CACTATAGCAAGGGTGGGGAGGTCGCCAAAGTGTCGAAGTAAAT back to topCoding sequence (CDS) from alignment at chr4:184081..189874+ >NO04G00500.2 ID=NO04G00500.2|Name=NO04G00500.2|organism=Nannochloropsis oceanica|type=CDS|length=4320bp|location=Sequence derived from alignment at chr4:184081..189874+ (Nannochloropsis oceanica) ATGACCCCTCACGTCCAGTACCCTCTGCGCGTTGTTTGGGACATCGACTT CTTCACAGGTCCATCTCTTCAACGCCTTGAAACACGTCATCAACCCACTC CCTCAACCAGCACAATGGCGGGCCTGGAAAAAATGGCCCTCCGGGGCATC CGTTCTTTTTCTCCGGATGACGAGCAGACCATCGAATTCTATAGCCCACT GACGATGATTGTGGGGCAGAATGGTTCGGGGAAGACTACCATTATCGAGT GTCTCAAGTATGCCTGCACGGGCAAGCTTCCTCCCGGGGGGGCATCCACG GCCGGACAGAGCTGGATCCACGACCCAAAGCTCACCGACGATACGGAGGT GAAGGCCTCGATCAAGCTGCGCTTCAAGGCCCGAGATGGGAAAAGGATGG TGGTTGTCCGTTCCCTCCAACTTCAGTACAAAGGCAAGAGCAAGAACCCC ACCTTCAAGCAGCTCGAAGGCGTGATCAAGACCATCAACCCCGTCACCAA GAAATCGGAGTCCCTCGGCCACAAATGCCAAGATCTCAACACTTTCGTTC CTCAAGCCACGGGTATCTCCACCGCCATCCTCGAAAGCGTTGTTTTCTGT CACCAGGAAGAAAGCAGCTGGCCCTTACAAGACGGCGCTACGCTCAAGAA GAAATTCGACGACATTTTCGAGTCCACCCGTTACACAAAGGCCTTGGAAG CCATTGAAAAATGCCGGAAAGTTCGGGCAGAAGAACACAAAAACCTCAAG TTGGACCTGGCGGCCCTTGCCGAGAATAGGGAGACGGCCAGTGACATACG CCGAGAACTCGAGAGGAAAACCGCGGAAATCCAAGAGATTCAAGCCAAGC AAGACAAGGTGGAAGAACGTATCAGCACCTTGCAGAACCGCGCACGGGAG GCCTCGAGGGAGTTGGCAGAATTCAACGAGGTGGCTCAGGTCATTGAAAA GAAGGCCATGTTGGTGGACGAAAAAAAGCGCGGTGTTGTGGAGAAGAAAA GAAGTTTGGGCACCCAAGAAATGACGGGGCAGAGCGACGAGTCCCTCCAG AAGCGCTTGGCTTCCTTTGCTAAGGACCAGGAGGAGGTGCAGCGGGAGTT GGCCCGGCTGCGACAAAAGGAGATGACGCACAAGAAGGCCATTGATGGGT ATAGGGCAGAAGTGCAGAAACTCGTTGGAAGACGGGGAGAGCTCAAGGCT CAAATGAAGCAGTTGACCCAGTTGGTCGAAGATAGGAACAAGGACATTGT GGCGTTATGTGATAAGTATGCCTTGGCCCAGCCGAGAACGTTGTCGGGGG CGCTGTCACAGGTGATTAGGGTGGGTGGTGGTGGAGGTGGGGGAGAAAGG TCTGCGTCGGCGTCGGCCTCGCCGGCGGGTGTGAAGGACTCACACTCTCA TATGGCGGTGGAGTTGCCGGAGGTGGAGATGAAGAGATTTTTGTTTGATT TCCAGGGGAAGAAAGAGAATTTGACTACGGAGTTGGACGCGTTTCGGACG GACAAGACGCGGGTGTTGAACAAAAAGAGGGGGGAGATGACAGAGTTGGA AGCCACTTTGCTGGCGAACGAGACGGCCAAAAGGGCCAGGCAGGCGGAGA TGAAGGAGATAGAGGCAAAGTTCGCCGCAATCACGAATGATTTACACGGG CAAGCAGCGGTCCCGGCGTCGGTTTTGGATGCTATGAGGCAAGAGGTGGC GAAAGCCAAGGCGGAATACACGGCCATGACCGAGAAAAGCAAAGAAATGG AATTCGAAAAAACGATCAAATGCCTCCAGAAGGACTTAAGGGAGGTAGCC GTCGAATTAGATAGCGAACAGAAAGTCTGGGAGTCCATGAAAGAGAGCAG CACTGAGCGGACGGAATACGAAGTCAACTTCCGAGACTACACGAACAAAA TGGAAGAGCTAAAGGCAGAGCTCGCCCGCTTCAACAGCAGCCTCTACCGG CCCCTTGTCCCTCAAGACCTGACCCCCGAGCTCGATGACATTCAGCAGGC CGTGACGCACTTGAATGCGATACTTTTCCCCCAACACGACGCAGCCGCCA GATCTCAAGCCCGTGAACTCACCCTTGCCCGTCAACGTCTCACCGAGCTG GCAACCAACCAATCAAGGGACAAGCAAGAACAAGAGCGGTACGTCGCCAA AATAGGCGAGATGGAGAAGCAGAGCTTGGTGGAGAAGGCAAGGCGGATCC TGGAACAGCTGCAGGGGGAATTCGAGGAGAAGATTCGCAAGAATCCGGAG AAGTACTCGTACAAATTCGATGACCGAGAGATCGATGAGGCCGTGAAGGA GGTGGAGCAAGTGGTGAAGATGGACGTGGCAAATTTGCATGATTTACAGA GCAAGCTCAATTTTGCCGCAAAAGTTGTGAAGAGTAGTAGTGAGTCGAGG GTGTGTGAGTGCTGTACGAGCTCGTTGAGCGCCAGAGCCGTGAAAGCCCT CGAGGATAATATGGGAGGGTTTATGGCCAGGTGGGAGGACAAAGCCAACC GTCTACGGGAGGAGACTCTGCCCATGCACGAGCAATATCTACGAGACCTG CAGGCCTGCACCTCGGACATGAAGGCCATGGCTTCACTGAGGGAGGCATT GGGGGAGGTGGAAGGGAGGCTGAAGGGCGCGGAGGAGCAGGTAGCTGCGT TGGCGACGACGGTGCACGGGTTAGAGGAGGGGTTGCGAGATATGGAGGCG GCGAAGAAGAAGCTGGATGAGAGCAAGGTTCAGGTGGTAGGGATTAGCAA TGCCTGCGCGGAATTGTACAAAAAGAAGGAGGAATTAGATTTTAGACAGA AGCGATTACAGGCGTATTCGGTGGATGGGGACTCTCGTGGGTTAGAGGAG GTGGAAACGAGCCTCAAAACCTTACGGGCGACGCAAGCGGAGGCAAATCG CCGCTTGCAGGAAATTCAGGCGGAGCAGAGCAAGGCGAGCAAACGGTTGA TTAACCAGGCGGACCTCGTGAGGGCCGCCGAGACGTCGTTGGAAGCCAAG TTGAAGACAATGAGCCGGAGTCAGGAGCTGGAGAAAGAGAAGGCAGCACT CAAGATGAGACAGGGGCAGGTAGAGGCGGAGGTGCAGCAGGCAACGGAGG AAGAAATACCCCTGAGGCAGGAACTGAAGGGCGTGCAGGCCGACTTCGAT GCGCTCAAGTCGAGGTTGGATGCAGAGGATGCGGACAGGCAGAGGCAGCG AATTGAGTGCACCCAGCGGTACCAGGATTTCGAGGCGTTGCAGCGCAAGG TGAGGGAGATGGAGGGCATAGGACTGGGAGGGCTGCTGGCTGGGGTGGAG CAGCAGCAGCAGCAGCTAGAGCACGACATTCAAGGGATGGAGGGGCAGCT GGAGGAAATGGGGCCTCAAGTGCAGGTGGTCGCAAAGAGGCTGGAGGATA AGGACCAGACGAGGAGGCAGATCGAGGATAATTTGACGTATCGACGCATG CAGGCAGAGGTGAAGAAGGCGGAGGAGGAGATGGTGGAGTTGCAGGGGCA GTTGGAAGGCTTTGAGGAGAAGGGGGAGCTGGCAAGGAAGGTGGAGAAGA TACAGCAGCAGTGGCGCGAGGCGAGGGAGACGAAAGTGAGACACGAAGCC AGGATTGATACACTGGCGGCGGTCCAGCAGGAACAGCAGGCGAAGCTAGG CTCAAGCAAATTCCAGAATATCGAGCAAAGGTACAGAGACACTAAGATCA CGGCTGAAACGACCAATCTCGCGGTGGAAGACTTGCAGAAGTATCATAAA GCCCTGGACCGCGCTTTGATGCAATACCACAAGATGAAGATAGAAGAGAT CAACAAGATCATCCGGGAGCTGTGGACACGCACGTATCAAGGCAACGACA TCGAGGAAATTGCAATCGTGTCGGGGGAGGATGGGGGGGGAAAAGCGACA CGCTCCTACAATTATCGAGTGGTGATGAAAAAGGGACAAACGTTGTTGGA CATGCGGGGGCGGTGTTCAGCGGGACAGAGGGTGCTGGCGAGCATTGTGA TTCGCCTGGCCTTGGCCGAGGCGTTTTGCATCAATTGCGGGGTGATGACT TTGGATGAGCCGACGACGAATTTGGACCATGAGAATAAGGGAGGGCTGGC AGGAGCAATCGCGAGGTTGATTGCCGAGAGGGGCAGGCAGCAGAATTTTC AATTGATTGTGATTACGCACGATGAGGACTTTGTGGATATGGTGAAGCAG GAGCTGAGCACGCAGGCGGGAGTTTCGATGCCGGAGTACTACTGGCGCGT TTCCCGGGAACCGGCACCTGGTGGACGGGCTTACTCCACCATCCAGGTCT GTGAGTGGGGCACCATCTAA back to top
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