NO04G00280, NO04G00280 (gene) Nannochloropsis oceanica

Overview
NameNO04G00280
Unique NameNO04G00280
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6638
Alignment locationchr4:120929..127566 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr4genomechr4:120929..127566 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO04G00280 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL073nonsL073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR059ncniR059Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR112ngnoR112Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004979NSK004979Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO04G00280.1NO04G00280.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|285717gene_1809Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO04G00280.1NO04G00280.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO04G00280 ID=NO04G00280|Name=NO04G00280|organism=Nannochloropsis oceanica|type=gene|length=6638bp
ATGCCGCTGCCGTTCCTTTGTATTTTTACGTTGCCCTGTAACCATACGCT
TCTTTTCCTGAGCACCTAGATGATCCATGATTAAACAATTTTACCGATTA
CGTAAGTCCAAGCGCCTGAAAGCCTGCTTCTCAATTCTTGTGGGCGCGTT
CATGTATGCTTTACATTTTCCATACGCAAACGTCAAGCAACGAACAACAA
CCGCTCGCCTTCGGCTCTAATGTGCTTCTCACTCCTATTATTGCGTCTCA
ACCATACCCGTGAGAGACACACCTGCTCATTCCGCACCACTTTCAGGCTT
TCGCGAGTCTTTTGCATGTCAGAGAGCATGAGGACGAGCAAAGCCATAGC
TTTGGCTCCCTCTCGCTCTCCACTGACGATGAAAAGCGACGAAGAAGCAA
GCCGAAGCCATCACATCTCCCCATCCCTCTCTAATCCTTCCAACGCAGCC
ACAGGATGGGGCAACCCACCGCCATGACCACGGTGGACGCGGGGACTGAG
AAGCAGGTGGCGGTGGCGGCCACAACCGCCGGCGGGGCATCGTCCAGCCC
CTCGGTGTCGTCTGCATCCTCCCCTCCTCCTCCCCCACCCCGTAAGACCT
ACGCGGCCAAGAACCTCACGCAGGCCCTGGTCTACCGCGTAAAAGGGGGC
TTGGGAAGCAAAGGTCACCATCCTTCAATCTCTCCTCACAGCACGGCTGC
TGGCGCGTCGGGTGCAGCGTCGTCCTCCTTTGCCGCCGCCCTTTCGTCTC
CCCCGACTAGCGCCAGTCAGGCTGGAAGTGGTACTGCCAACACGGCCACC
AGTCATCGTTTGACGTTGCTTAAGACAGGTAGCAGCAGTGGCGCGGCGGG
TGGAGACGGGATGGTGGCACCGACCGCGGCACAGGTGGCGGGGCACGGGG
GCAAAGCAGGGGGGGGTGCAGGCGCGGGAGGCATGATGGCCACTGTTTTA
ACGGCCGCCTCCGGAAGCGCCGAGGGTGGGTGGGGCAACAAATTGATGCC
ACCAGCACAATTGCCAGTACCGCCAGAACCGCCTTCTCCGGTGCCTGAAA
CCAAGGCATTACCCTCAAAGGCAGGGGGAGCTGCGTCGGGAGGGTGGGGT
GGCAGTCCAGCAGCAACAACAACAAAGACAGCAGCAGCGGCGACGACAGC
AGCAAGTAGTGGTGGTAGTAGTAGTAGTAGTAGCGCCACTCAGGGTGCCG
GTGGCGACGGTCTCAGTAACAGCAGCGTCAGCATCCACAAAGAGTATTTG
GAAGAAGACGACGCCTTCAGGCCGTCGGCGCGCTTTTCGTCACACATGGA
AAAAGGAGAAGAGGAGGACTACCGGCGTTATCCGGTCGCGACTTGGAAGC
GAGAGAGGGGAGAATGGGGGGAAAGAGACTCTGCATTGCACCTTTCCGCT
CTCCCTCCCCTCCCCTCTTCTTCTTCCTCTTCTTCAGCATCACTACCTTC
CCGGTTGGGAGAAGGAGGACAGGCGAGAGAGGAGAGGTGGGAGAGGGGCG
TCGGCGAGGCGTTGGCGGAGGGGAGGTCGGGAGGGAGGTGGGTGCCTCCG
CACCGGCGGGAGGCAGAGAAGGGAGAAAAAGGGGAGAGAAGAGAGTACGG
AGAGAGAAGATGTTATGGTTCGGGATGGGGTGGAGAAAGTGGAGGAGGAG
GAGGGTGGGAGGGAAGGAGGGGAGGAGGAGGGTTGGAGGGAAGGAGGGAG
GGAGGAGGAGGGTGGGAGGGAAGGAGGGAGGGAGGAGGAGGGTGGGAGGG
AAGGAGGGAGGGAGGAGGAGGGTGGGAGGGAAGGAGGGAGGGAGGAGGGG
TAGAGGACCACAGTCACCATCATGGAGGTCGTCGGGACGAGGAGCAAGGT
GGTTGGGGAGCGGTGGGGGCAGGGAGAGAGGGGTGGAGGGAAGGAGGGAC
CTTCGCGTCCGTGGAGCGGGGAGGGGGTTGTCGGGGTGATTTAGGCGGTG
GTAGGGGAGCCAGAGGAGGAAGCGAGAGAGGTCGCGGCCCTTACTACTCC
CAAGGCGATCGAGGCAATGGAAGAGCAGGCCACTCCTCCTCCTCCCCCGC
CTGGGGAAGGGACACAGGCGATGCCATCTCCTCTCCCTCGGCTGCCTACG
AGTACACCCTCGACAGGAGCTCTCACCCCCACGGCCCCCACTCCCCACTC
GCCTCCCCTACAACCCTTCCTTCCTTCCTGCCTTCCCTGGCTTCCTCCGC
AGCCGGATGGGGTCAGAGCCGAACCGCCTTGGGCTTGGCAGCGCACAATG
AGGAGGATTTTCAAAAGGAAAAGGCAAGGGAAGAAGTGGAGCGACGATGG
CAGCGGCAGCAGCACCAGCGGCAAGAGAAACAAGAGCAGCACCAGCGGCA
ATTGAAGGATAAGCAAGAGCAGCAGCACCAGCGGCAAGAGAAACAAGAGC
ACCACCAGCGGCAGCAAGAGAAACAAGAGCAGCAGCAGCAGCAGCAGCAA
GAGAAACAAGAGAAACAAGAGAAACAAGAGAAACAAGAGAAACAAGAGCA
GCACCAGCGGCAATTGAAGGAGAAGCAAGAGGATTGGCGACGGAGGCAGC
TAGTCCAAGAGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACACG
CCCTTCAACGACGTCCAAGAAAGGCACCGTCTCCCTCCTTCCTCCCCCTG
TCTCTCCTCCTCGTCCTCCTCCTCCTCGAGGGAAGGAAGGAGGGAGAGAG
AGAGGGGTTTGCTGCCCGGAGAGGACATCTCGGAGTACATGCGGCGAAAG
GCCTTGGAAAAAAAGAGTCTGAAGGAGCAGGAAGAGAGGGCACGACGGGA
AAGGGAGGAACAGGAGAGGGAGCGCCGACACATGCAGCACCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCACCAGCAGCAGCAACAGCAACAGCAG
CAACAGCAGCAACAGCAGCAACAGCCACAGCAACAACAACAAGGGCTTCA
AGCGTCTGCTCCGCCCTGTACAATTTTGCCTCGTCCAGCCGCTGGCAAGT
TGTGCTCCTCCCCTCCCTCGCACCGGTCAGGAGTAGGAGTAGGATGGGAG
CTATCACACCTCTCCACGCTTTCCTTGCTTGGACAGCAGCAGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGTACGGCAAACACCTCTTCAACC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCGGCCTTCTTCTCCTTCC
CCTCGTCCTCGTCCGTCATCTTATGCGAGCGTCTTGGGTGGGCGAGAGGG
AGGCAAGGAGGAAGGTTCGCCTGTCATGTCTGTGCCTGACCAAGAGCAGC
AGCACCAGCAGAAACAGTTGTGGCAGCAGCACCACGTGCAGGAGAGGGGC
TTCATAGTGCCCCCCACCTACTCGCAGTATCCACGCTCCACGACGGAAGA
GACGGAGGAAGGGAGGGAAGGAGCGAGGGAGGAGGGACGGGTTGTGGCAT
TTGATGATGAGGGTAGGGACAGGGCGGGGGGGACTGAGGTGGGGAGGGAG
GGTGGGGGAAAGCGGCAGCTCTTTGACCCTTCCCAGGGGAAATTGGTTGA
TGTGAAGGAGAAGGCGGGCAGGGAAGGAAGGAGGGAAGGAGGGATGACCG
AGAGGGGACGTAGGCCAGAGCGGGAGAGGAAGGTACGGAAGGAGCCCCTT
GTCAGACCACCCCCTGGCCAGCAGCATGCAGATCAAGAGAAGCTGAATGC
CGTGGCTGCTACTGCAGCGGCTGCTGCTGCTGCGGCGGCGGCCGCTGAAG
CGCAAGCGGCTGCAGAGGCTCGGCGGAGGGTGCGAGCGGAGGAGAGGGCG
AGGAGAGGGCCCAGGACGAAAGGCCGTCTCTGGATGTATAACGAGGACGG
GGAGATCGTGAGTGCTGACCCATCGAGAGACAGGACGGAGGAGGAGAAGA
AGAAGAAGAAGAGGAAGAAAAAGAAGGTGGACGTGGAACAGCAGCAGCGA
AAAGAGCGACAAGGGCAAGAGCAGCAGGAAGAGGAGGAAGGAGACGCTGC
TCCTACTGATGATGCTGATACACCTGCAGGCGGGGTAGAGCAACCGCCAC
AGATCCCTCGGCCTCCCCCGGCAGTAAGTGCGTGGATGCGTCCATTGCTG
TCGAGTGAGGGAATGGCAAAACTTGTGGCAGAGGAGAGAGCAACAGCCGG
CCTACCTCTTAGGGAGGAGGAGGAGGAAGAGGGCGAGGAAGAGGGGGAGG
AGAAAGAGGCGGAGGGAGGGAAAGAGGTGGGGGAGAAGAAGAAGACAAGG
AAAAGGGGGAAGAAGAAGCCTAAAGCAAAGAAAGGGCGGGAAGATACAGA
TGAATCTCAAGATGATGAAAAGCAGCAGCAAGAGCAGCAGCAGTACCAGC
GGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAACGC
GGTCATCATAGCCTGTTGCATCAACAACAACGACAGCGGCAGCAACAGCA
GCAGCAGCAGCAGCAGCAGTTCTCTTCTTCGTCCATCTTAACTCCTCCCT
TGATCGTGCACCAGCACCTGCAGCACCGGCAGGACCAGCTCCAGCAGCCC
GAGCAAAGCACCTCACTTGTCCAGTCTATCGGCCGCCTCATCGGCACTAG
CAGTAGTAGTGGTGATGGTCAAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAAGGAGAGGAAAGGGAGAAGCGGCAGGG
ATGGCACTGCATCCTTGTATTGGCGGCCTGGAGAGTACTCAGAGAGCGAG
GGGAGGCCTCGAAGGGGCGTTGGGTGGGCAGGACATGAGGAAAGGGAGGG
AGGAAGGAGGGGGGCGACGGACAGGGGAGTGGAGTCGTACTGCTGGATCA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGGCGTGGTGGGGGGCACCCGCC
CCCACCCGCATCTTGGTCTGCAGCCTCAGCCGCCGAGTCGTGGACGCTCG
AGCCCTCTTCTGCCCCCGAGCCTTCTTCCTCCTTCTCCTCCTCAACCCCT
CTTTTACCTTCGATGAAGCTGCAACCTGTGGCAGTGGCCAAGGCGAAGCA
GGTCGAGGAGGAAGAAGAGGAGGGCTCGAGCCTCTACCCCTCCTCCTTCT
CTGAAGATTGGTACGTCAGCCTCGTTGGGGTTGAAGGGCCACCGGCTGCT
CCTTCCTCCTCCTCGTCCTCTTCCTCCTTGCTTCGACAGACCCCTCTCGC
CGCTCCAGGCCCTTCAGGAGGTAGTCTTGGATGGGGACATCAGCAGCAGC
AGGGGGCATTTGACAATAGGACGGGGACTGGTCCTGTCCCTCCTCCTCAT
CTTCACGCCCATCTTGGCGGTGCTGGAGAAGGGCGAGGCGCCATGAGCAA
CAGCAGCAGTAAAAGAAGCAGCAGCAGCAGCAGCAGCAATAGCGTAGGCA
CGGGAGgtcagggagcaagcacttggggcctgcccggcatgcttatccag
cctccacccccccccccccccttcctccttcgacaccatctcacaagcaa
caccccaagccccgcctccctccttcgatgcattctgcatcctcccccct
tccctcatcctcctcgtcttcctctgccacagCGGCCCAGCTGTGGGGGT
TGCCAGCTTCCTCTGCCTCTCTGATCTCATCCCCTTCCTCCGCATTCCAT
GTGACTGACACGGGTGGAGAGGAGGGTAGGGCAATGGCATCGTCATTTTT
GACTCATTTGGATAAACAAGGGAAAGAAGAGGTGGGTGGAGGAAGAGGCC
TGAGACGAGGAGGAGGGGGAGGACGAGGTGCAGGACGGGGAAGGTCTGGG
GTGCGAGGTGCGAGAAGAGGAGGGGGAAAGGCAGGAAGAGGTGGAGGAGG
GGAGAAAGGGAGCATCCAGCCGAGGGGAACTAAGATGTACCAGCCGGTGC
CGCAGCAGAAGCAGCAGCAGCAGCAACAACAGCAGGAGCAAGATGGAAGA
GCGACAGTGAATGGCGGTGAAGGAGAAGGGGGAGGAGGAAGAGGTGGTGT
GGAGAAGGGAAGGCAGACCCTTCCTGCTGGCCAAGGGGAAAATAAGAAAA
GTGGTACTGCGAGACGTGGAGCTGCCAAGCAGCAGCAGCTGCAGCAGCAA
CCACAACAACCACAACAACCACAACAACCAACACGGCAATTGCGTCAGCG
TCAGCAACAACAGCAGCAGCAGCAGGAGCAACTGCAACGGCAAGTTGGAA
GAGCGACAGTGGATGCGGCAGTGAATGGCGGTGAAGGAGAAGGGGGAGGA
GGAAGAGGTGGTGTGGAGAAGGGAAGGCAGACCCTTCCTGCTGGCCAAGG
GGAAAATAAGAAAAGTAGTACTGCGAGACGTGGAGCTGCCAAGCAGCAGC
AGCCTCAGTCACAGCAGCATCACAAGCAACAGTATCCTGTCGCAGCAGCA
GCAACAACAACAACAACAACAACAACAACAGCAACAGCAACAGCAGCAGC
ACTTAGAACAGCAGCAGCGCGGATCAGCCCCAAAGACAAGGGAGACAAGT
GAAGAGGTTAGGAGGCAGCATCAACCGACATAGATGTCCACAAAGAGAAA
GACAGACACAACTAGTGTGTGTGTGCCATAGCCCCTAGCCCCATAAAAGA
TAGCAAACTAAGTAACTAGCCAGTTTATAGACATGAAA
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protein sequence of NO04G00280.1

>NO04G00280.1-protein ID=NO04G00280.1-protein|Name=NO04G00280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1957bp
MGQPTAMTTVDAGTEKQVAVAATTAGGASSSPSVSSASSPPPPPPRKTYA
AKNLTQALVYRVKGGLGSKGHHPSISPHSTAAGASGAASSSFAAALSSPP
TSASQAGSGTANTATSHRLTLLKTGSSSGAAGGDGMVAPTAAQVAGHGGK
AGGGAGAGGMMATVLTAASGSAEGGWGNKLMPPAQLPVPPEPPSPVPETK
ALPSKAGGAASGGWGGSPAATTTKTAAAATTAASSGGSSSSSSATQGAGG
DGLSNSSVSIHKEYLEEDDAFRPSARFSSHMEKGEEEDYRRYPVATWKRE
RGEWGERDSALHLSALPPLPSSSSSSSASLPSRLGEGGQAREERWERGVG
EALAEGRSGGRWVPPHRREAEKGEKGERREYGERRCYGSGWGGESGGGGG
WEGRRGGGGLEGRREGGGGWEGRREGGGGWEGRREGGGGWEGRREGGGVE
DHSHHHGGRRDEEQGGWGAVGAGREGWREGGTFASVERGGGCRGDLGGGR
GARGGSERGRGPYYSQGDRGNGRAGHSSSSPAWGRDTGDAISSPSAAYEY
TLDRSSHPHGPHSPLASPTTLPSFLPSLASSAAGWGQSRTALGLAAHNEE
DFQKEKAREEVERRWQRQQHQRQEKQEQHQRQLKDKQEQQHQRQEKQEHH
QRQQEKQEQQQQQQQEKQEKQEKQEKQEKQEQHQRQLKEKQEDWRRRQLV
QEEQQQQQQQQQQHTPFNDVQERHRLPPSSPCLSSSSSSSSREGRRERER
GLLPGEDISEYMRRKALEKKSLKEQEERARREREEQERERRHMQHQQQQQ
QQQQQQHQQQQQQQQQQQQQQQQPQQQQQGLQASAPPCTILPRPAAGKLC
SSPPSHRSGVGVGWELSHLSTLSLLGQQQQQQQQQQQQQQQYGKHLFNQQ
QQQQQQQQRRPSSPSPRPRPSSYASVLGGREGGKEEGSPVMSVPDQEQQH
QQKQLWQQHHVQERGFIVPPTYSQYPRSTTEETEEGREGAREEGRVVAFD
DEGRDRAGGTEVGREGGGKRQLFDPSQGKLVDVKEKAGREGRREGGMTER
GRRPERERKVRKEPLVRPPPGQQHADQEKLNAVAATAAAAAAAAAAAEAQ
AAAEARRRVRAEERARRGPRTKGRLWMYNEDGEIVSADPSRDRTEEEKKK
KKRKKKKVDVEQQQRKERQGQEQQEEEEGDAAPTDDADTPAGGVEQPPQI
PRPPPAVSAWMRPLLSSEGMAKLVAEERATAGLPLREEEEEEGEEEGEEK
EAEGGKEVGEKKKTRKRGKKKPKAKKGREDTDESQDDEKQQQEQQQYQRQ
QQQQQQQQQQQQQERGHHSLLHQQQRQRQQQQQQQQQQFSSSSILTPPLI
VHQHLQHRQDQLQQPEQSTSLVQSIGRLIGTSSSSGDGQGGGGGGGGGGG
GGGGGGRRGKGEAAGMALHPCIGGLESTQRARGGLEGALGGQDMRKGREE
GGGRRTGEWSRTAGSGGGGGGGGGGRGGGHPPPPASWSAASAAESWTLEP
SSAPEPSSSFSSSTPLLPSMKLQPVAVAKAKQVEEEEEEGSSLYPSSFSE
DWYVSLVGVEGPPAAPSSSSSSSSLLRQTPLAAPGPSGGSLGWGHQQQQG
AFDNRTGTGPVPPPHLHAHLGGAGEGRGAMSNSSSKRSSSSSSSNSVGTG
AAQLWGLPASSASLISSPSSAFHVTDTGGEEGRAMASSFLTHLDKQGKEE
VGGGRGLRRGGGGGRGAGRGRSGVRGARRGGGKAGRGGGGEKGSIQPRGT
KMYQPVPQQKQQQQQQQQEQDGRATVNGGEGEGGGGRGGVEKGRQTLPAG
QGENKKSGTARRGAAKQQQLQQQPQQPQQPQQPTRQLRQRQQQQQQQQEQ
LQRQVGRATVDAAVNGGEGEGGGGRGGVEKGRQTLPAGQGENKKSSTARR
GAAKQQQPQSQQHHKQQYPVAAAATTTTTTTTTATATAAALRTAAARISP
KDKGDK*
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Synonyms
Publications