NO04G00180, NO04G00180 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO04G00180
Unique Name	NO04G00180
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4470
Alignment location	chr4:75940..80409 -

Link to JBrowse

Properties


Property Name	Value
Description	Kinesin-like protein

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr4	genome	chr4:75940..80409 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003777	microtubule motor activity
GO:0008017	microtubule binding
GO:0005524	ATP binding
GO:0008017	microtubule binding
GO:0005524	ATP binding
GO:0003777	microtubule motor activity
GO:0003774	motor activity
GO:0000166	nucleotide binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007018	microtubule-based movement
GO:0007018	microtubule-based movement

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR027640	Kinesin-like_fam
IPR001752	Kinesin_motor_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0005874	microtubule

Homology

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BLAST of NO04G00180 vs. NCBI_GenBank
Match: XP_008862242.1 (hypothetical protein H310_01019 [Aphanomyces invadans] >ETW08437.1 hypothetical protein H310_01019 [Aphanomyces invadans])

HSP 1 Score: 340.9 bits (873), Expect = 1.200e-89
Identity = 204/498 (40.96%), Postives = 284/498 (57.03%), Query Frame = 0

Query:   87 TWRVETFCRIKPQVNSSSPSAKHFRSIPYELRHGQGPLGADPPHRRLRIGVAGSGT-------GGMAFNSRRQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSGKTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESAYDLLDVSTRTKPLEGWTKIQMM---DDEDGEMNLRNLKLYEATSEEDALNLLFLGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTFGKLNLVDLAGSERLFKTDNHQSXXXXXXXXXLAASNYTRMEGKYINLSLHYLEQVIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLSTDVLANEEVNPDQLTASLQAEVLRLRRKISAQETAL---ATALTQTQEEESKNAWRGLTGAEKHLCRDVVRGFV 572
            TW++ T+ RI+P    ++ S        Y +           PH     GVA + T          +   +R E++F +T+VF    +QD+++H     VV   + GYNGTI AYGQTGSGKTFT+TGG+S+ ERG++PRAI+ ++D      D  +K  ISY+EIY +S YDLLD +   KP+E WT++Q+    DDED     R L +YEA SEE+ALNLLFLGN HRITS TPMN AS+RSH IFT+      L+ G  +        KL++VDLAGSER++K D                S   R EG++INLSLH+LEQVI+ALQ K   +K     G+                       P ++H+PYRNS++TS+LR SLGGNC++VF+ TLN E + ++ES+STCRF QRC++++ DV  NEEV+   L   LQAE  RL+R ++  + AL   A   ++ Q +        L  ++K  C  +V  F+
Sbjct:    4 TWKIGTYARIRPLRKGATKS--------YTIA---------SPHD----GVASTITFPYPAAPDSRSNLKQRDELEFKYTQVFDCPTSQDKIFHDACLGVVTGAVEGYNGTILAYGQTGSGKTFTITGGESYQERGIVPRAISTLFDAFEARTDMTYKCYISYLEIYNDSVYDLLDRTHMNKPIEAWTRLQVQLSDDDEDANAQFRKLGVYEAKSEEEALNLLFLGNAHRITSDTPMNMASSRSHSIFTM------LIEGHRHNSEVILHSKLHVVDLAGSERVYKRD---------------GSERMRTEGRFINLSLHHLEQVILALQTKPAAKKGAKAMGK-----------------------PPNHHVPYRNSMLTSVLRGSLGGNCKSVFIGTLNPEAEFVDESISTCRFMQRCSEVAVDVHVNEEVDVYVLAELLQAENKRLQRDLAVTQAALKDQADVNSKLQAQVHPGVAMELHASDKAECDQLVEKFL 436

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BLAST of NO04G00180 vs. NCBI_GenBank
Match: XP_008862243.1 (hypothetical protein, variant [Aphanomyces invadans] >ETW08438.1 hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 340.9 bits (873), Expect = 1.200e-89
Identity = 204/498 (40.96%), Postives = 284/498 (57.03%), Query Frame = 0

Query:   87 TWRVETFCRIKPQVNSSSPSAKHFRSIPYELRHGQGPLGADPPHRRLRIGVAGSGT-------GGMAFNSRRQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSGKTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESAYDLLDVSTRTKPLEGWTKIQMM---DDEDGEMNLRNLKLYEATSEEDALNLLFLGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTFGKLNLVDLAGSERLFKTDNHQSXXXXXXXXXLAASNYTRMEGKYINLSLHYLEQVIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLSTDVLANEEVNPDQLTASLQAEVLRLRRKISAQETAL---ATALTQTQEEESKNAWRGLTGAEKHLCRDVVRGFV 572
            TW++ T+ RI+P    ++ S        Y +           PH     GVA + T          +   +R E++F +T+VF    +QD+++H     VV   + GYNGTI AYGQTGSGKTFT+TGG+S+ ERG++PRAI+ ++D      D  +K  ISY+EIY +S YDLLD +   KP+E WT++Q+    DDED     R L +YEA SEE+ALNLLFLGN HRITS TPMN AS+RSH IFT+      L+ G  +        KL++VDLAGSER++K D                S   R EG++INLSLH+LEQVI+ALQ K   +K     G+                       P ++H+PYRNS++TS+LR SLGGNC++VF+ TLN E + ++ES+STCRF QRC++++ DV  NEEV+   L   LQAE  RL+R ++  + AL   A   ++ Q +        L  ++K  C  +V  F+
Sbjct:    4 TWKIGTYARIRPLRKGATKS--------YTIA---------SPHD----GVASTITFPYPAAPDSRSNLKQRDELEFKYTQVFDCPTSQDKIFHDACLGVVTGAVEGYNGTILAYGQTGSGKTFTITGGESYQERGIVPRAISTLFDAFEARTDMTYKCYISYLEIYNDSVYDLLDRTHMNKPIEAWTRLQVQLSDDDEDANAQFRKLGVYEAKSEEEALNLLFLGNAHRITSDTPMNMASSRSHSIFTM------LIEGHRHNSEVILHSKLHVVDLAGSERVYKRD---------------GSERMRTEGRFINLSLHHLEQVILALQTKPAAKKGAKAMGK-----------------------PPNHHVPYRNSMLTSVLRGSLGGNCKSVFIGTLNPEAEFVDESISTCRFMQRCSEVAVDVHVNEEVDVYVLAELLQAENKRLQRDLAVTQAALKDQADVNSKLQAQVHPGVAMELHASDKAECDQLVEKFL 436

[Close]

BLAST of NO04G00180 vs. NCBI_GenBank
Match: GAX93743.1 (Hypothetical protein PINS_001664 [Pythium insidiosum])

HSP 1 Score: 338.2 bits (866), Expect = 7.800e-89
Identity = 170/370 (45.95%), Postives = 243/370 (65.68%), Query Frame = 0

Query:  150 RRQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSGKTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESAYDLLDVSTRTKPLEGWTKIQMMDDEDGEMNLRNLKLYEATSEEDALNLLFLGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTFGKLNLVDLAGSERLFKTDNHQSXXXXXXXXXLAASNYTRMEGKYINLSLHYLEQVIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLSTDVLANEEVNPDQLTASLQ 520
            +R  + F F ++F P+++QDQV+  V   +V+S L GYNGTI AYGQTGSGKT+T+TGG+ + +RG+IPR ++ +++   +    R+   ISY+EIY E+ YDLLD S   +P+E WTK+ +MDD++GEM+ RNL +YEA SEE+ALNLLFLGN +R+TS TPMN+AS+RSH IF++ I+A P+   +          KL+LVDLAGSER++K +  Q                 R EGK+INLSLH+LEQVI++L+   R                              P+   +YH+PYRNS++TS+LR SLGGNC++VF+ TLN E++ L+ES+STCRF QRC+++S +V  N EV+ ++   SL+
Sbjct:  117 QRDALQFQFNDIFDPSVSQDQVFQSVCQDIVNSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTMFEEFERRAHMRYSCFISYLEIYNENVYDLLDRSHTDRPIEEWTKVLLMDDDEGEMHFRNLGVYEAVSEEEALNLLFLGNMNRVTSDTPMNQASSRSHSIFSVMIEARPVDSEV------IVTSKLHLVDLAGSERVYKREGTQR---------------MRTEGKHINLSLHHLEQVILSLRTAKRN-----------------------------PAVSKTYHVPYRNSMLTSVLRGSLGGNCKSVFIATLNPEVEFLDESISTCRFMQRCSEVSVEVAVNSEVDAEKRLQSLE 436

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BLAST of NO04G00180 vs. NCBI_GenBank
Match: XP_009526682.1 (hypothetical protein PHYSODRAFT_501545 [Phytophthora sojae] >EGZ17624.1 hypothetical protein PHYSODRAFT_501545 [Phytophthora sojae])

HSP 1 Score: 335.1 bits (858), Expect = 6.600e-88
Identity = 179/406 (44.09%), Postives = 257/406 (63.30%), Query Frame = 0

Query:  150 RRQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSGKTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESAYDLLDVSTRTKPLEGWTKIQMMDDEDGEMNLRNLKLYEATSEEDALNLLFLGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTFGKLNLVDLAGSERLFKTDNHQSXXXXXXXXXLAASNYTRMEGKYINLSLHYLEQVIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLSTDVLANEEVNP-------DQLTASLQAEVLRLR-RKISAQETALATALTQTQEEE 548
            +R  +DF F +VF P+I+Q+QV++ V   +V S L GYNGTI AYGQTGSGKT+T+TGG+ + +RG+IPR ++ +++   + P+ R+   ISY+EIY E+ YDLLD S   +P+E WTK+ +MDD++G+M+ RNL ++EA SEE+ALNLLFLGN +R+TS TPMN+AS+RSH IF++ I++ P+              KL+LVDLAGSER++K D  Q                 R EGK+INLSLH+LEQVI++L+ K                                 +   +YHIPYRNS++TS+LR SLGGNC++VF+ TLN E D ++ES+STCRF QRC++++ D+  N EV+        ++L A L+A    L+ R +  +    A AL   ++EE
Sbjct:   55 QRDGLDFHFNDVFDPSISQEQVFNEVCLDIVYSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFEKRPNMRYSCYISYLEIYNENVYDLLDRSHTDRPIEEWTKVLLMDDDEGDMHFRNLGVFEAVSEEEALNLLFLGNMNRVTSDTPMNQASSRSHSIFSVMIESRPV------DSDMIVTSKLHLVDLAGSERVYKRDGTQR---------------MRSEGKHINLSLHHLEQVILSLRSKRN-------------------------------TVSRTYHIPYRNSMLTSVLRGSLGGNCKSVFIATLNPENDFIDESISTCRFMQRCSEVAVDIAVNSEVDTEKRLEAVEKLNAELEATNFELQARAVQLENDLKAQALHFAKQEE 408

[Close]

BLAST of NO04G00180 vs. NCBI_GenBank
Match: XP_002899590.1 (kinesin-like protein [Phytophthora infestans T30-4] >EEY61950.1 kinesin-like protein [Phytophthora infestans T30-4])

HSP 1 Score: 335.1 bits (858), Expect = 6.600e-88
Identity = 167/364 (45.88%), Postives = 243/364 (66.76%), Query Frame = 0

Query:  150 RRQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSGKTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESAYDLLDVSTRTKPLEGWTKIQMMDDEDGEMNLRNLKLYEATSEEDALNLLFLGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTFGKLNLVDLAGSERLFKTDNHQSXXXXXXXXXLAASNYTRMEGKYINLSLHYLEQVIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLSTDVLANEEVNPDQ 514
            +R  +DF + +VF P+++Q+QV++ V   +V S L GYNGTI AYGQTGSGKT+T+TGG+ + +RG+IPR ++ +++   + P+ R+   ISY+EIY E+AYDLLD S   +P+E WTK+ +MDD++G+M+ RNL ++EA SEE+ALNLLFLGN +R+TS TPMN+AS+RSH IF++ I++ P+   +          KL+LVDLAGSER++K +  Q                 R EGK+INLSLH+LEQVI++L+ K                                 +   +YHIPYRNS++TS+LR SLGGNC++VF+ TLN E D L+ES+STCRF QRC++++ D++ N EV+ ++
Sbjct:   55 QRDGVDFHYNDVFDPSVSQEQVFNEVCLDIVFSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFEKRPNMRYSCYISYLEIYNENAYDLLDRSHTDQPIEEWTKVHLMDDDEGDMHFRNLGVFEAVSEEEALNLLFLGNMNRVTSDTPMNQASSRSHSIFSVMIESRPMDSDL------IVTSKLHLVDLAGSERVYKREGTQR---------------MRSEGKHINLSLHHLEQVILSLRTKKN-------------------------------AVSKTYHIPYRNSMLTSVLRGSLGGNCKSVFIATLNPETDFLDESISTCRFMQRCSEVTVDIVVNTEVDTEK 366

[Close]

BLAST of NO04G00180 vs. NCBI_GenBank
Match: XP_024581770.1 (kinesin-like protein [Plasmopara halstedii] >CEG45401.1 kinesin-like protein [Plasmopara halstedii])

HSP 1 Score: 330.1 bits (845), Expect = 2.100e-86
Identity = 173/402 (43.03%), Postives = 254/402 (63.18%), Query Frame = 0

Query:  150 RRQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSGKTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESAYDLLDVSTRTKPLEGWTKIQMMDDEDGEMNLRNLKLYEATSEEDALNLLFLGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTFGKLNLVDLAGSERLFKTDNHQSXXXXXXXXXLAASNYTRMEGKYINLSLHYLEQVIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLSTDVLANEEVNPDQLTASL--------------QAEVLRLRRKISAQETALA 538
            +R  ++F F  VF P I+Q+Q+++ V   +V S LHG+NGTI AYGQTGSGKT+T+TGG+ + +RG+IPR ++ +++   + PD R+   ISY+EIY E+ YDLLD S    P+E WTK+ +MDD++G+M+ RNL ++EA SEE+ALNLLFLGN +RITS TPMN+AS+RSH IF++ I++ P+   +          KL+LVDLAGSER++K +  Q                 R EGK+INLSLH+LE+VI++L+ K                                 ++  + HIPYRNS++TS+LR SLGGNC++VF+ TLN E D L+E++STCRF QRC++++ DV  N EV+ ++  A++              Q +V++L + ++ Q   LA
Sbjct:   55 QRDGVEFQFHNVFDPTISQEQIFNEVCLDIVHSALHGFNGTILAYGQTGSGKTYTITGGEHYADRGIIPRTLSTIFEEFEKRPDMRYSCYISYLEIYNENVYDLLDRSHTDTPIEDWTKVTLMDDDEGDMHFRNLGVFEAVSEEEALNLLFLGNMNRITSDTPMNQASSRSHSIFSVMIESRPIDSDV------IVTSKLHLVDLAGSERVYKREGTQR---------------MRSEGKHINLSLHHLEKVILSLRSKRN-------------------------------TASRAQHIPYRNSMLTSVLRGSLGGNCKSVFIATLNYEKDFLDETISTCRFMQRCSEVAVDVAVNTEVDAEKRLATVEKINAELETRNLXXQLQVVQLEKNLNDQALHLA 404

[Close]

BLAST of NO04G00180 vs. NCBI_GenBank
Match: ETK71177.1 (hypothetical protein L915_21518 [Phytophthora parasitica])

HSP 1 Score: 329.3 bits (843), Expect = 3.600e-86
Identity = 176/410 (42.93%), Postives = 258/410 (62.93%), Query Frame = 0

Query:  150 RRQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSGKTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESAYDLLDVSTRTKPLEGWTKIQMMDDEDGEMNLRNLKLYEATSEEDALNLLFLGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTF---GKLNLVDLAGSERLFKTDNHQSXXXXXXXXXLAASNYTRMEGKYINLSLHYLEQVIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLSTDVLANEEVNPDQL-------TASLQAEVLRLRRKISAQETALATALTQTQEEESK 550
            +R  +DF F +VF P+++Q+ V++ V   +V S L GYNGTI AYGQTGSGKT+T+TGG+ + +RG+IPR ++ +++   + P+ R+   ISY+EIY E+ YDLLD S   +P+E WTK+ +MDD++G+M+ RNL ++EA SEE+ALNLLFLGN +R+TS TPMN+AS+RSH IF++ I+         +RP+ S      KL+LVDLAGSER++K D  Q                 R EGK+INLSLH+LEQVI++L+ K                                 +   +YHIPYRNS++TS+LR SLGGNC++VF+ TLN E D L+ES+STCRF QRC++++ D+  N EV+ ++         A L+   L+L+++ +  E  +     Q  ++E +
Sbjct:   55 QRDGVDFHFNDVFDPSVSQEHVFNDVCLDIVYSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFEKRPNMRYSCYISYLEIYNENVYDLLDRSHTDRPIEDWTKVLLMDDDEGDMHFRNLGVFEAVSEEEALNLLFLGNMNRVTSDTPMNQASSRSHSIFSVMIE---------SRPTDSDLIVTSKLHLVDLAGSERVYKRDGTQR---------------MRSEGKHINLSLHHLEQVILSLRTKKN-------------------------------AVSRTYHIPYRNSMLTSVLRGSLGGNCKSVFIATLNPENDFLDESISTCRFMQRCSEVAVDIAVNTEVDTEKRLESVEKHNAELETTNLQLQQRAAQLERDIKDQTLQFAKQEQQ 409

[Close]

BLAST of NO04G00180 vs. NCBI_GenBank
Match: ETL24627.1 (hypothetical protein L916_21382 [Phytophthora parasitica])

HSP 1 Score: 329.3 bits (843), Expect = 3.600e-86
Identity = 176/410 (42.93%), Postives = 258/410 (62.93%), Query Frame = 0

Query:  150 RRQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSGKTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESAYDLLDVSTRTKPLEGWTKIQMMDDEDGEMNLRNLKLYEATSEEDALNLLFLGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTF---GKLNLVDLAGSERLFKTDNHQSXXXXXXXXXLAASNYTRMEGKYINLSLHYLEQVIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLSTDVLANEEVNPDQL-------TASLQAEVLRLRRKISAQETALATALTQTQEEESK 550
            +R  +DF F +VF P+++Q+ V++ V   +V S L GYNGTI AYGQTGSGKT+T+TGG+ + +RG+IPR ++ +++   + P+ R+   ISY+EIY E+ YDLLD S   +P+E WTK+ +MDD++G+M+ RNL ++EA SEE+ALNLLFLGN +R+TS TPMN+AS+RSH IF++ I+         +RP+ S      KL+LVDLAGSER++K D  Q                 R EGK+INLSLH+LEQVI++L+ K                                 +   +YHIPYRNS++TS+LR SLGGNC++VF+ TLN E D L+ES+STCRF QRC++++ D+  N EV+ ++         A L+   L+L+++ +  E  +     Q  ++E +
Sbjct:   55 QRDGVDFHFNDVFDPSVSQEHVFNDVCLDIVYSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFEKRPNMRYSCYISYLEIYNENVYDLLDRSHTDRPIEDWTKVLLMDDDEGDMHFRNLGVFEAVSEEEALNLLFLGNMNRVTSDTPMNQASSRSHSIFSVMIE---------SRPTDSDLIVTSKLHLVDLAGSERVYKRDGTQR---------------MRSEGKHINLSLHHLEQVILSLRTKKN-------------------------------AVSRTYHIPYRNSMLTSVLRGSLGGNCKSVFIATLNPENDFLDESISTCRFMQRCSEVAVDIAVNTEVDTEKRLESVEKHNAELETTNLQLQQRAAQLERDIKDQTLQFAKQEQQ 409

[Close]

BLAST of NO04G00180 vs. NCBI_GenBank
Match: ETL77849.1 (hypothetical protein L917_21241 [Phytophthora parasitica])

HSP 1 Score: 329.3 bits (843), Expect = 3.600e-86
Identity = 176/410 (42.93%), Postives = 258/410 (62.93%), Query Frame = 0

Query:  150 RRQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSGKTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESAYDLLDVSTRTKPLEGWTKIQMMDDEDGEMNLRNLKLYEATSEEDALNLLFLGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTF---GKLNLVDLAGSERLFKTDNHQSXXXXXXXXXLAASNYTRMEGKYINLSLHYLEQVIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLSTDVLANEEVNPDQL-------TASLQAEVLRLRRKISAQETALATALTQTQEEESK 550
            +R  +DF F +VF P+++Q+ V++ V   +V S L GYNGTI AYGQTGSGKT+T+TGG+ + +RG+IPR ++ +++   + P+ R+   ISY+EIY E+ YDLLD S   +P+E WTK+ +MDD++G+M+ RNL ++EA SEE+ALNLLFLGN +R+TS TPMN+AS+RSH IF++ I+         +RP+ S      KL+LVDLAGSER++K D  Q                 R EGK+INLSLH+LEQVI++L+ K                                 +   +YHIPYRNS++TS+LR SLGGNC++VF+ TLN E D L+ES+STCRF QRC++++ D+  N EV+ ++         A L+   L+L+++ +  E  +     Q  ++E +
Sbjct:   55 QRDGVDFHFNDVFDPSVSQEHVFNDVCLDIVYSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFEKRPNMRYSCYISYLEIYNENVYDLLDRSHTDRPIEDWTKVLLMDDDEGDMHFRNLGVFEAVSEEEALNLLFLGNMNRVTSDTPMNQASSRSHSIFSVMIE---------SRPTDSDLIVTSKLHLVDLAGSERVYKRDGTQR---------------MRSEGKHINLSLHHLEQVILSLRTKKN-------------------------------AVSRTYHIPYRNSMLTSVLRGSLGGNCKSVFIATLNPENDFLDESISTCRFMQRCSEVAVDIAVNTEVDTEKRLESVEKHNAELETTNLQLQQRAAQLERDIKDQTLQFAKQEQQ 409

[Close]

BLAST of NO04G00180 vs. NCBI_GenBank
Match: ETP00585.1 (hypothetical protein F441_22016 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 329.3 bits (843), Expect = 3.600e-86
Identity = 176/410 (42.93%), Postives = 258/410 (62.93%), Query Frame = 0

Query:  150 RRQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSGKTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESAYDLLDVSTRTKPLEGWTKIQMMDDEDGEMNLRNLKLYEATSEEDALNLLFLGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTF---GKLNLVDLAGSERLFKTDNHQSXXXXXXXXXLAASNYTRMEGKYINLSLHYLEQVIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIPYRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLSTDVLANEEVNPDQL-------TASLQAEVLRLRRKISAQETALATALTQTQEEESK 550
            +R  +DF F +VF P+++Q+ V++ V   +V S L GYNGTI AYGQTGSGKT+T+TGG+ + +RG+IPR ++ +++   + P+ R+   ISY+EIY E+ YDLLD S   +P+E WTK+ +MDD++G+M+ RNL ++EA SEE+ALNLLFLGN +R+TS TPMN+AS+RSH IF++ I+         +RP+ S      KL+LVDLAGSER++K D  Q                 R EGK+INLSLH+LEQVI++L+ K                                 +   +YHIPYRNS++TS+LR SLGGNC++VF+ TLN E D L+ES+STCRF QRC++++ D+  N EV+ ++         A L+   L+L+++ +  E  +     Q  ++E +
Sbjct:   55 QRDGVDFHFNDVFDPSVSQEHVFNDVCLDIVYSALDGYNGTILAYGQTGSGKTYTITGGEHYADRGIIPRVLSTIFEEFEKRPNMRYSCYISYLEIYNENVYDLLDRSHTDRPIEDWTKVLLMDDDEGDMHFRNLGVFEAVSEEEALNLLFLGNMNRVTSDTPMNQASSRSHSIFSVMIE---------SRPTDSDLIVTSKLHLVDLAGSERVYKRDGTQR---------------MRSEGKHINLSLHHLEQVILSLRTKKN-------------------------------AVSRTYHIPYRNSMLTSVLRGSLGGNCKSVFIATLNPENDFLDESISTCRFMQRCSEVAVDIAVNTEVDTEKRLESVEKHNAELETTNLQLQQRAAQLERDIKDQTLQFAKQEQQ 409

The following BLAST results are available for this feature:

BLAST of NO04G00180 vs. NCBI_GenBank

BLAST of NO04G00180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
XP_008862242.1	1.200e-89	40.96	hypothetical protein H310_01019 [Aphanomyces invad...	[more]
XP_008862243.1	1.200e-89	40.96	hypothetical protein, variant [Aphanomyces invadan...	[more]
GAX93743.1	7.800e-89	45.95	Hypothetical protein PINS_001664 [Pythium insidios...	[more]
XP_009526682.1	6.600e-88	44.09	hypothetical protein PHYSODRAFT_501545 [Phytophtho...	[more]
XP_002899590.1	6.600e-88	45.88	kinesin-like protein [Phytophthora infestans T30-4...	[more]
XP_024581770.1	2.100e-86	43.03	kinesin-like protein [Plasmopara halstedii] >CEG45...	[more]
ETK71177.1	3.600e-86	42.93	hypothetical protein L915_21518 [Phytophthora para...	[more]
ETL24627.1	3.600e-86	42.93	hypothetical protein L916_21382 [Phytophthora para...	[more]
ETL77849.1	3.600e-86	42.93	hypothetical protein L917_21241 [Phytophthora para...	[more]
ETP00585.1	3.600e-86	42.93	hypothetical protein F441_22016 [Phytophthora para...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL073	nonsL073	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR085	ncniR085	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR059	ncniR059	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR112	ngnoR112	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK004969	NSK004969	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO04G00180.1	NO04G00180.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|612122	gene_10667	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
jgi.p\|Nanoce1779_2\|577944	gene_1797	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100166g4	gene2159	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO04G00180.1	NO04G00180.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO04G00180 ID=NO04G00180|Name=NO04G00180|organism=Nannochloropsis oceanica|type=gene|length=4470bp
ATGTCATCAATATCATTCCGGTCGATGCAAGACCGGCGGGTTCTCACCAG
CACCGGTGGTAATACCAACCGGTCCTCTTTGTCAGTAGGCGAAGGCTCGC
CCCGCGCGACCATCACCTGTACTACCCCAGGCAGCAGCAAGGTAGCCCAC
CGTCGCAGCGCTCAAAAGCACACGGAACAAGAATGTATGAAACAGAAAGA
AAAAGATGAAACCATGCTGGAAGAGCCAGTAAAGAAAAATCGGCAGAAGA
AGCGAACGACTTGGAGGGTCGAGACGTTTTGCCGgtgcgtggtaattgga
gggaatgtgggctcgttaagcgtgatcatgatctggaatttgtacccctt
tttttccttctctctttatagAATCAAGCCACAAGTCAATTCGTCTTCCC
CTTCGGCCAAGCATTTCCGGTCTATCCCTTACGAATTGCGCCATGGACAA
GGACgtacgtattcgttctatttgtgggtggagtaaagatgagcaattat
tggatagggcttatacatccttgtatctctgcttccaatcccaactattt
tttctcataacatagCCCTGGGTGCAGATCCTCCCCACCGCCGCCTTCGT
ATAGGCGTAGCAGGGAGCGGTACAGGTGGGATGGCCTTTAACTCCCGCCG
ACAGGAGATGGACTTCAGCTTCACAGAGgtgcgccagaaagccagacagg
gcaaatggcaaggctggaaagagcaaggatgatatcaataaataattgtt
tgtacatggatgaggaagcaggggctcgttattacctaaactctcctctc
tttctgtccctccctctctcccttcctcttcagGTGTTCCCTCCCGCCAT
CACCCAAGACCAGGTCTACCACCGTGTGGCCAGTGCCGTCGTGGACTCAG
TCCTACATGGATACAACGGCACGATTTTTGCCTgtacgtgcttctcactt
cctcccctcccttccgcacttcttcccgccgtccactgactctcctgttc
ccccaccctccttccctgccagACGGACAGACGGGCTCCGGGAAGACCTT
CACCATGACGGGCGGCGACTCCTTCGACGAGCGCGGCCTCATTCCCCGTG
CCATCACTGATGTCTATGATACCATCAGACAGACGCCTGACCGACGCTTC
AAGgtccttgtcctccctccctccctccctccctacctacctacctacct
agccaatcatccgcccgcccgaatgagaccaacccatgcccccctatcca
ttccccttcctcccccagGTCTTAATTTCTTATATGGAGATCTATAAAGA
GAGCGCATATGACCTCCTGGACGTGAGCACCCGCACTAAACCCTTAGAGG
GGTGGACCAAAgtatgcatgccctccctccctccctccctccctccctcc
ctccctccctccatgcgtccatctctttccacccccctacccccctactc
cagctttatcgaatccaattcatagtcagaaatgcacgataagccttcac
ttggatcttgccctcacacccacgcggagcttcccttggtcagcggttta
aactctctcacccacacactcctgccctcaaccaccactcttcttcttcc
cccccctccagATTCAGATGATGGACGACGAAGATGGGGAAATGAATCTG
CGGAACCTGAAGCTGTACGAGGCCACATCGGAGGAGGATGCTTTGAACCT
CCTCTTCCTCGGCAACTGGCACAGGATTACGAGCTCGACGCCGATgtaag
gaaggagggggggagggacggacggacggacggtgggaatgagggaggga
ccgagggatttgtggtcaagggcgtaatgggctttctggggaagagaagc
tacagtgaggaatggagggaaggagagaaggaaagggagggagggagggg
tctacagctcgatgtcgccttgatcgccgatcttcctcctatatttcttt
tctgtctaattcatgtagGAACGAGGCGAGCACCCGGTCTCATTGCATTT
TCACCATCCGTATCCAAGCCGACCCACTCCTGCACGgtacagagggaggg
cgcgagggagggaagagggaaaggcgggaaagaaagagggcaaaggagtc
cccgtactcacgagagaacaaatgcactaattcctcctcggggttgctct
cccctccctagGCATCCCGAACCGGCCCTCCAAGTCCACCTTTGGCAAGC
TCAATCTCGTCGATCTGGCAGgtaaacctctctccttttttctcctcctc
tcttccttcctccctcccacctttcctcacgttcccttcctttcattcag
GCTCTGAACGTCTCTTCAAGACGGACAACCACCAGAGTAGCAGCAGCAGC
AGCAGCGGCAGCGGCCTGGCCGCCAGCAATTACACGCGGATGGAGGGAAA
GTACATTAATCTGTCCCTTCACTACCTCGAACAGGTCATCATCGCCTTAC
AAGAGAAAGgtatgtcgccctccttccctctccctctccctccctccctc
ctactctcatcctcccaaaatctacatgtccattccttctcaaacttttt
cacttgctctgccttcctctcgctcttctcacattgcctgccgccacata
cagCCCGGAGGCAGAAGGATGAAGATGAGGAAGGACAGGGCCGGCCTGGC
CTTGTCCGCGGTTCCTCCTCCTCTTCCTTCACCAGCAGCTCGCTCTACCC
CTCCTCCCCCTCCTCCTACCACATCCCTTATCGGAATAGCGTCATGACCT
CCATCCTCCGAGACTCCCTTGGCGGGAACTGCAGGACTGTCTTCGTCGTC
ACGCTCAACACGgtcagacaccttccttccctccctccctccctcccttt
tttcacttctttgtctcacgcaccttcctccctttcccttcctccctccc
tccctccctccctccctcccattccctccccagGAACTCGATCACCTGGA
GGAGTCTTTGTCCACCTGCCGATTCGCGCAACGCTGTGCCCAGCTCTCGA
CGGACGTCCTCGCCAACGAAGAAGTGAACCCGGACCAGCTCACGGCCTCC
TTACAAGCTGAGgtatgtcatttctccatccctcgatctattgcttcctc
cctcccttcctcccttcctccctcgatttccctcatccctccttctcaga
gtccttccgccgctttcctatttttccttctttgtgtgtacagGTGCTGC
GTCTCCGTCGCAAGATCTCGGCTCAAGAGACCGCACTTGCGACTGCCCTG
ACCCAAACACgtacgtgccctctacttttctcgctcccttccacgcagcc
catccaccatcccttccccctctcttgtacccgcaacagAGGAAGAAGAA
TCGAAGAACGCCTGGCGGGGTCTGACGGGCGCAGAGAAGCATTTGTGTCG
CGATGTTGTCCGCGGCTTTGTGCAGgtacgagaaagaagagagaaatgga
gggaggacggagccgagggggcatttgtcgtcagcctttactcataatgt
cacgtcttctgccacttagGTCGCGTCCTCCCTCCCTGCCTCCCCTCCCT
CCTCCCCTCCCTCGGGCCCACTCTCCGTCCCTCCCCATTATGAATGGATC
TATACATTGGCACGGCCGCTCGTCGCCTACTGCGCGCGTTTGCTCTTGCT
CTGGGGGGAGGCCGTCAGGGAGGAAGGGAGGAAGGAAAAGAAGGAGGGAG
TGATGAAGTACCAGCAGGAGCAATGGAAACGCCACCAGCGGCTCGAGCAG
GCGCACCACCATCAGCATCGTTCTTCTGTTGGGGAGAGACCCACATCCGG
ATTTGCCTTATTACAGCAGCAGCAACAGCAGCAGCAGCGTGAGCCAGACG
CTCAGATCACCCCACACATCCATACCTCTTTCTTTGCGACTGCAGCCCCC
ACCGCGCCCCTTTCCATCGCTTCCCCCCATCAGGAAGGGAAGGAGGCGGA
GGCGGAGGCGGAAGCGAGGAACGAGGGACGGAGGGTCAGGGGGCTACTGC
AGCAGGGGCATGTCTTTTTCAAGCTGGGGAAAGGGGAAAGGAAGCACGAA
AGATTTGTGTGGGTGGCTCTAGACATGACAAGACTGCACTGGCGGAAGGA
GAGGAAGGGAGAAAAAAAGGGAGGGAATAAGGGGGAGGACGAGGGAGAGC
ATAAAAATGGCAATCCTCCTATTTCTTCCTCGTTCCTTGTTCTTTCAGAC
TGCCAGCGTGTAGCCGCTGGTCGTGACGGCGAGAGAGGGGAAAAGGAGGG
GAAAAGGGAGGAAGAGAAGGGTGTCTTTTTCACCCTGTACAGTCACGACC
GCTACGTCACATTTGAGGTCCCTCCGTCCCCTCATGCCAAGCGAACAAGA
AACGCCTGGGTTGCAGCCTTAGCCTCTGTCCTCCAGCAACAGCAACTACA
GTCGCAGGCCCTCTCTCCCTCACGATCCCCCCCCTCCCTTGTCTTTCTCC
TGTTCCACGAAAGACGTTGA

protein sequence of NO04G00180.1

>NO04G00180.1-protein ID=NO04G00180.1-protein|Name=NO04G00180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=889bp
MSSISFRSMQDRRVLTSTGGNTNRSSLSVGEGSPRATITCTTPGSSKVAH
RRSAQKHTEQECMKQKEKDETMLEEPVKKNRQKKRTTWRVETFCRIKPQV
NSSSPSAKHFRSIPYELRHGQGPLGADPPHRRLRIGVAGSGTGGMAFNSR
RQEMDFSFTEVFPPAITQDQVYHRVASAVVDSVLHGYNGTIFAYGQTGSG
KTFTMTGGDSFDERGLIPRAITDVYDTIRQTPDRRFKVLISYMEIYKESA
YDLLDVSTRTKPLEGWTKIQMMDDEDGEMNLRNLKLYEATSEEDALNLLF
LGNWHRITSSTPMNEASTRSHCIFTIRIQADPLLHGIPNRPSKSTFGKLN
LVDLAGSERLFKTDNHQSSSSSSSGSGLAASNYTRMEGKYINLSLHYLEQ
VIIALQEKARRQKDEDEEGQGRPGLVRGSSSSSFTSSSLYPSSPSSYHIP
YRNSVMTSILRDSLGGNCRTVFVVTLNTELDHLEESLSTCRFAQRCAQLS
TDVLANEEVNPDQLTASLQAEVLRLRRKISAQETALATALTQTQEEESKN
AWRGLTGAEKHLCRDVVRGFVQVASSLPASPPSSPPSGPLSVPPHYEWIY
TLARPLVAYCARLLLLWGEAVREEGRKEKKEGVMKYQQEQWKRHQRLEQA
HHHQHRSSVGERPTSGFALLQQQQQQQQREPDAQITPHIHTSFFATAAPT
APLSIASPHQEGKEAEAEAEARNEGRRVRGLLQQGHVFFKLGKGERKHER
FVWVALDMTRLHWRKERKGEKKGGNKGEDEGEHKNGNPPISSSFLVLSDC
QRVAAGRDGERGEKEGKREEEKGVFFTLYSHDRYVTFEVPPSPHAKRTRN
AWVAALASVLQQQQLQSQALSPSRSPPSLVFLLFHERR*

Synonyms

Publications