NO03G05670, NO03G05670 (gene) Nannochloropsis oceanica

Overview
NameNO03G05670
Unique NameNO03G05670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3350
Alignment locationchr3:1632095..1635444 +

Link to JBrowse

Properties
Property NameValue
DescriptionCarboxypeptidase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1632095..1635444 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO:0019538protein metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004185serine-type carboxypeptidase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR001563Peptidase_S10
Homology
[Close]
BLAST of NO03G05670 vs. NCBI_GenBank
Match: EWM30038.1 (serine protease family [Nannochloropsis gaditana])

HSP 1 Score: 459.1 bits (1180), Expect = 1.600e-125
Identity = 205/303 (67.66%), Postives = 254/303 (83.83%), Query Frame = 0 
Query:   26 LLLLLGVVAMVSSSILDRKSNAWHARFPQRGWLWENREYIGRLVGEDVETKLCDPDVNSQAGYFKITGSKDKNYFYWFFESRSSPSTDPFIIWLSGGPGCSSTLALLMENGPCSVNANGNDTIPNPNSWTNHANMMWIDQPAGVGFSYQSSADSVTDSEDQVAEDIYQFLQSFFTANPQFTNNDFYVFGESYGGHFVPAVGHKIFMENQRNKGRAIMINLKGLGIGNGLTDPELQYQFYSKYARNNTYGIELVSAEDAQKMEAAIPRCVSLIKSCQSWGGKAPCQLARLFCSKYILEYFPVGE 329
            + LLL    ++SS+ ++R    W A FP RGW+WE++ +IG L G+DVETKLCDPDVNSQAGYFKI+GSKDKNYFYWFFESR++P TDP IIWL+GGPGCSS LALL ENGPC+VN +G +T  NP SWT HANM+WIDQPAGVGFSY    D VTD+ED+VAED+Y FLQSF TANPQ+  N+FYVFGESYGGHFVPAV HKIF+ N +N G+AI INL+GLGIGNG+TDPELQYQ+Y+ YA +N+YGI L+SAE+ + +++A+P+CVSLIKSCQSWGG+  C+LA LFC+++IL++FP+ E
Sbjct:   49 IFLLLRASVVISSAAMERNGRPWQAFFPTRGWVWEDKAFIGELAGQDVETKLCDPDVNSQAGYFKISGSKDKNYFYWFFESRATPETDPLIIWLTGGPGCSSILALLYENGPCTVNDDGKNTTLNPYSWTKHANMLWIDQPAGVGFSYDGPGDKVTDTEDEVAEDLYHFLQSFLTANPQYIKNEFYVFGESYGGHFVPAVAHKIFVANIQNSGQAIPINLQGLGIGNGMTDPELQYQYYADYAVSNSYGINLISAENVEVVDSAVPQCVSLIKSCQSWGGETACRLAWLFCTQHILKHFPLEE 351
[Close]
BLAST of NO03G05670 vs. NCBI_GenBank
Match: XP_005855029.1 (cathepsin A (carboxypeptidase C) [Nannochloropsis gaditana CCMP526] >EKU21327.1 cathepsin A (carboxypeptidase C) [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 313.9 bits (803), Expect = 8.500e-82
Identity = 149/245 (60.82%), Postives = 181/245 (73.88%), Query Frame = 0 
Query:   56 GWLWENREYIGRLVGEDVETKLCDPDVNSQAGYFKITGSKDKNYFYWFFESRSSPSTDPFIIWLSGGPGCSSTLALLMENGPCSVNANGNDTIPNPNSWTNHANMMWIDQPAGVGFSYQSSADSVTDSEDQVAEDIYQFLQSFFTANPQFTNNDFYVFGESYGGHFVPAVGHKIFMENQRNKGRAIMINLKGLGIGNGLTDPELQYQFYSKYARNNTYGIELVSAEDAQKMEAAIPRCVSLIKSC 301
            GW+WE++ +IG L G+DVETKLCDPDVNSQAGYFKI+GSKDKN                          CSS LALL ENGPC+VN +G +T  NP SWT HANM+WIDQPAGVGFSY    D VTD+ED+VAED+Y FLQSF TANPQ+  N+FYVFGESYGGHFVPAV HKIF+ N +N G+AI INL+GLGIGNG+TDPELQYQ+Y+ YA +N+YGI L+SAE+ + +++       + K+C
Sbjct:  453 GWVWEDKAFIGELAGQDVETKLCDPDVNSQAGYFKISGSKDKNC-------------------------CSSILALLYENGPCTVNDDGKNTTLNPYSWTKHANMLWIDQPAGVGFSYDGPGDKVTDTEDEVAEDLYHFLQSFLTANPQYIKNEFYVFGESYGGHFVPAVAHKIFVANIQNSGQAIPINLQGLGIGNGMTDPELQYQYYADYAVSNSYGINLISAENVEVVDSGEVNVYDIRKNC 672
[Close]
BLAST of NO03G05670 vs. NCBI_GenBank
Match: EWM30035.1 (serine carboxypeptidase [Nannochloropsis gaditana])

HSP 1 Score: 295.4 bits (755), Expect = 3.100e-76
Identity = 147/302 (48.68%), Postives = 196/302 (64.90%), Query Frame = 0 
Query:   26 LLLLLGVVAMVSSSILDRKSNAWHARFPQRGWLWE-NREYIGRLVGEDVETKLCDPDVNSQAGYFKITGSKDKNYFYWFFESRSSPSTDPFIIWLSGGPGCSSTLALLMENGPCSVNANGNDTIPNPNSWTNHANMMWIDQPAGVGFSYQSSADSVTDSEDQVAEDIYQFLQSFFTANPQFTNNDFYVFGESYGGHFVPAVGHKIFMENQRNKGRAIMINLKGLGIGNGLTDPELQYQFYSKYARNNTYGIELVSAEDAQKMEAAIPRCVSLIKSCQSWGGK-APCQLARLFC-----SKYI 321
            LL LLG      S+ +   S     +     W       Y G L    V ++LCDP V S +GYF ITG+++  YFYW FESR+ P +DP I+WL+GGPGCSS LAL +ENGPC VN  GN T+ NP+SW ++AN++WIDQP GVGFSY   AD V D E+ V ED+YQFLQ+FF AN ++    F++FGESYGGH+ PA GH+++  NQ      + INL+G+GIGNGLTDPE+QY +Y + + NN+YGI+ V  E    M+ A+P C+ LI  CQ  GG+   C +A+++C     SKY+
Sbjct:   22 LLALLGFSTQTDSATIPGAST---VKTTTHAWSTPGGHHYQGVLSSNAVSSELCDPSVESVSGYFNITGTREAAYFYWLFESRADPRSDPLIVWLTGGPGCSSILALFVENGPCYVNEWGNGTVLNPDSWNSNANILWIDQPVGVGFSYGERADYV-DGEEGVGEDLYQFLQAFFKANEKYQELAFFIFGESYGGHYAPAAGHRVWEGNQDLVQGDVYINLQGIGIGNGLTDPEIQYAYYPQMSYNNSYGIQAVDEETFNDMQDAVPTCLHLIHRCQHNGGEDFACSVAQVYCNAAIESKYV 319
[Close]
BLAST of NO03G05670 vs. NCBI_GenBank
Match: ETI45962.1 (hypothetical protein F443_09601 [Phytophthora parasitica P1569])

HSP 1 Score: 285.8 bits (730), Expect = 2.500e-73
Identity = 144/250 (57.60%), Postives = 174/250 (69.60%), Query Frame = 0 
Query:   68 LVGEDVETKLCDPDVNSQAGYFKITGSKDKNYFYWFFESRSSPSTDPFIIWLSGGPGCSSTLALLMENGPCSVNANGNDTIPNPNSWTNHANMMWIDQPAGVGFSYQSSADSVTDSEDQVAEDIYQFLQSFFTANPQFTNNDFYVFGESYGGHFVPAVGHKIFMENQRNKGRAIMINLKGLGIGNGLTDPELQYQFYSKYARNNTYGIELVSAEDAQKMEAAIPRCVSLIKSCQSWGGKAPCQLARLFCS 318
            L    V+   CD      +GYFKITGSK KNYFYWFFESR SPSTDP IIWL+GGPGCSS LALL ENGPCSVN++      NP SW   AN+MWIDQP GVGFSY   ++  T SE +V +D+Y FLQ FF A P++    FYVFGESY GH+VPA+ H+IF  NQ+ +G  + INLKG GIGNGLTDPE+QY++Y   A NNTYG++ VS      M+AA+  CV +I SCQ+   KA C  A+ FC+
Sbjct:   44 LTMNSVDEDFCD-STKQLSGYFKITGSKSKNYFYWFFESRGSPSTDPLIIWLTGGPGCSSILALLQENGPCSVNSD-LSLKKNPYSWNERANVMWIDQPVGVGFSYGDRSEYDT-SEKEVGDDMYHFLQEFFKALPEYQKLPFYVFGESYAGHYVPAISHRIFTGNQQKEG-PVEINLKGFGIGNGLTDPEVQYKYYPDMAYNNTYGVKAVSYPVYLAMKAAVSPCVGMISSCQT--TKAACLAAQTFCN 287
[Close]
BLAST of NO03G05670 vs. NCBI_GenBank
Match: ETK85961.1 (hypothetical protein L915_09396, partial [Phytophthora parasitica] >ETL39369.1 hypothetical protein L916_09300, partial [Phytophthora parasitica] >ETP15790.1 hypothetical protein F441_09533, partial [Phytophthora parasitica CJ01A1] >KUF81225.1 hypothetical protein AM588_10000235 [Phytophthora nicotianae])

HSP 1 Score: 285.8 bits (730), Expect = 2.500e-73
Identity = 144/250 (57.60%), Postives = 174/250 (69.60%), Query Frame = 0 
Query:   68 LVGEDVETKLCDPDVNSQAGYFKITGSKDKNYFYWFFESRSSPSTDPFIIWLSGGPGCSSTLALLMENGPCSVNANGNDTIPNPNSWTNHANMMWIDQPAGVGFSYQSSADSVTDSEDQVAEDIYQFLQSFFTANPQFTNNDFYVFGESYGGHFVPAVGHKIFMENQRNKGRAIMINLKGLGIGNGLTDPELQYQFYSKYARNNTYGIELVSAEDAQKMEAAIPRCVSLIKSCQSWGGKAPCQLARLFCS 318
            L    V+   CD      +GYFKITGSK KNYFYWFFESR SPSTDP IIWL+GGPGCSS LALL ENGPCSVN++      NP SW   AN+MWIDQP GVGFSY   ++  T SE +V +D+Y FLQ FF A P++    FYVFGESY GH+VPA+ H+IF  NQ+ +G  + INLKG GIGNGLTDPE+QY++Y   A NNTYG++ VS      M+AA+  CV +I SCQ+   KA C  A+ FC+
Sbjct:   48 LTMNSVDEDFCD-STKQLSGYFKITGSKSKNYFYWFFESRGSPSTDPLIIWLTGGPGCSSILALLQENGPCSVNSD-LSLKKNPYSWNERANVMWIDQPVGVGFSYGDRSEYDT-SEKEVGDDMYHFLQEFFKALPEYQKLPFYVFGESYAGHYVPAISHRIFTGNQQKEG-PVEINLKGFGIGNGLTDPEVQYKYYPDMAYNNTYGVKAVSYPVYLAMKAAVSPCVGMISSCQT--TKAACLAAQTFCN 291
[Close]
BLAST of NO03G05670 vs. NCBI_GenBank
Match: ETL92484.1 (hypothetical protein L917_09233, partial [Phytophthora parasitica])

HSP 1 Score: 285.8 bits (730), Expect = 2.500e-73
Identity = 144/250 (57.60%), Postives = 174/250 (69.60%), Query Frame = 0 
Query:   68 LVGEDVETKLCDPDVNSQAGYFKITGSKDKNYFYWFFESRSSPSTDPFIIWLSGGPGCSSTLALLMENGPCSVNANGNDTIPNPNSWTNHANMMWIDQPAGVGFSYQSSADSVTDSEDQVAEDIYQFLQSFFTANPQFTNNDFYVFGESYGGHFVPAVGHKIFMENQRNKGRAIMINLKGLGIGNGLTDPELQYQFYSKYARNNTYGIELVSAEDAQKMEAAIPRCVSLIKSCQSWGGKAPCQLARLFCS 318
            L    V+   CD      +GYFKITGSK KNYFYWFFESR SPSTDP IIWL+GGPGCSS LALL ENGPCSVN++      NP SW   AN+MWIDQP GVGFSY   ++  T SE +V +D+Y FLQ FF A P++    FYVFGESY GH+VPA+ H+IF  NQ+ +G  + INLKG GIGNGLTDPE+QY++Y   A NNTYG++ VS      M+AA+  CV +I SCQ+   KA C  A+ FC+
Sbjct:   49 LTMNSVDEDFCD-STKQLSGYFKITGSKSKNYFYWFFESRGSPSTDPLIIWLTGGPGCSSILALLQENGPCSVNSD-LSLKKNPYSWNERANVMWIDQPVGVGFSYGDRSEYDT-SEKEVGDDMYHFLQEFFKALPEYQKLPFYVFGESYAGHYVPAISHRIFTGNQQKEG-PVEINLKGFGIGNGLTDPEVQYKYYPDMAYNNTYGVKAVSYPVYLAMKAAVSPCVGMISSCQT--TKAACLAAQTFCN 292
[Close]
BLAST of NO03G05670 vs. NCBI_GenBank
Match: ETM45792.1 (hypothetical protein L914_09258, partial [Phytophthora parasitica])

HSP 1 Score: 285.8 bits (730), Expect = 2.500e-73
Identity = 144/250 (57.60%), Postives = 174/250 (69.60%), Query Frame = 0 
Query:   68 LVGEDVETKLCDPDVNSQAGYFKITGSKDKNYFYWFFESRSSPSTDPFIIWLSGGPGCSSTLALLMENGPCSVNANGNDTIPNPNSWTNHANMMWIDQPAGVGFSYQSSADSVTDSEDQVAEDIYQFLQSFFTANPQFTNNDFYVFGESYGGHFVPAVGHKIFMENQRNKGRAIMINLKGLGIGNGLTDPELQYQFYSKYARNNTYGIELVSAEDAQKMEAAIPRCVSLIKSCQSWGGKAPCQLARLFCS 318
            L    V+   CD      +GYFKITGSK KNYFYWFFESR SPSTDP IIWL+GGPGCSS LALL ENGPCSVN++      NP SW   AN+MWIDQP GVGFSY   ++  T SE +V +D+Y FLQ FF A P++    FYVFGESY GH+VPA+ H+IF  NQ+ +G  + INLKG GIGNGLTDPE+QY++Y   A NNTYG++ VS      M+AA+  CV +I SCQ+   KA C  A+ FC+
Sbjct:   49 LTMNSVDEDFCD-STKQLSGYFKITGSKSKNYFYWFFESRGSPSTDPLIIWLTGGPGCSSILALLQENGPCSVNSD-LSLKKNPYSWNERANVMWIDQPVGVGFSYGDRSEYDT-SEKEVGDDMYHFLQEFFKALPEYQKLPFYVFGESYAGHYVPAISHRIFTGNQQKEG-PVEINLKGFGIGNGLTDPEVQYKYYPDMAYNNTYGVKAVSYPVYLAMKAAVSPCVGMISSCQT--TKAACLAAQTFCN 292
[Close]
BLAST of NO03G05670 vs. NCBI_GenBank
Match: XP_008906515.1 (hypothetical protein PPTG_12069, partial [Phytophthora parasitica INRA-310] >ETN08227.1 hypothetical protein PPTG_12069, partial [Phytophthora parasitica INRA-310])

HSP 1 Score: 285.8 bits (730), Expect = 2.500e-73
Identity = 144/250 (57.60%), Postives = 174/250 (69.60%), Query Frame = 0 
Query:   68 LVGEDVETKLCDPDVNSQAGYFKITGSKDKNYFYWFFESRSSPSTDPFIIWLSGGPGCSSTLALLMENGPCSVNANGNDTIPNPNSWTNHANMMWIDQPAGVGFSYQSSADSVTDSEDQVAEDIYQFLQSFFTANPQFTNNDFYVFGESYGGHFVPAVGHKIFMENQRNKGRAIMINLKGLGIGNGLTDPELQYQFYSKYARNNTYGIELVSAEDAQKMEAAIPRCVSLIKSCQSWGGKAPCQLARLFCS 318
            L    V+   CD      +GYFKITGSK KNYFYWFFESR SPSTDP IIWL+GGPGCSS LALL ENGPCSVN++      NP SW   AN+MWIDQP GVGFSY   ++  T SE +V +D+Y FLQ FF A P++    FYVFGESY GH+VPA+ H+IF  NQ+ +G  + INLKG GIGNGLTDPE+QY++Y   A NNTYG++ VS      M+AA+  CV +I SCQ+   KA C  A+ FC+
Sbjct:   49 LTMNSVDEDFCD-STKQLSGYFKITGSKSKNYFYWFFESRGSPSTDPLIIWLTGGPGCSSILALLQENGPCSVNSD-LSLKKNPYSWNERANVMWIDQPVGVGFSYGDRSEYDT-SEKEVGDDMYHFLQEFFKALPEYQKLPFYVFGESYAGHYVPAISHRIFTGNQQKEG-PVEINLKGFGIGNGLTDPEVQYKYYPDMAYNNTYGVKAVSYPVYLAMKAAVSPCVGMISSCQT--TKAACLAAQTFCN 292
[Close]
BLAST of NO03G05670 vs. NCBI_GenBank
Match: ETO74657.1 (hypothetical protein F444_09663 [Phytophthora parasitica P1976])

HSP 1 Score: 285.8 bits (730), Expect = 2.500e-73
Identity = 144/250 (57.60%), Postives = 174/250 (69.60%), Query Frame = 0 
Query:   68 LVGEDVETKLCDPDVNSQAGYFKITGSKDKNYFYWFFESRSSPSTDPFIIWLSGGPGCSSTLALLMENGPCSVNANGNDTIPNPNSWTNHANMMWIDQPAGVGFSYQSSADSVTDSEDQVAEDIYQFLQSFFTANPQFTNNDFYVFGESYGGHFVPAVGHKIFMENQRNKGRAIMINLKGLGIGNGLTDPELQYQFYSKYARNNTYGIELVSAEDAQKMEAAIPRCVSLIKSCQSWGGKAPCQLARLFCS 318
            L    V+   CD      +GYFKITGSK KNYFYWFFESR SPSTDP IIWL+GGPGCSS LALL ENGPCSVN++      NP SW   AN+MWIDQP GVGFSY   ++  T SE +V +D+Y FLQ FF A P++    FYVFGESY GH+VPA+ H+IF  NQ+ +G  + INLKG GIGNGLTDPE+QY++Y   A NNTYG++ VS      M+AA+  CV +I SCQ+   KA C  A+ FC+
Sbjct:   43 LTMNSVDEDFCD-STKQLSGYFKITGSKSKNYFYWFFESRGSPSTDPLIIWLTGGPGCSSILALLQENGPCSVNSD-LSLKKNPYSWNERANVMWIDQPVGVGFSYGDRSEYDT-SEKEVGDDMYHFLQEFFKALPEYQKLPFYVFGESYAGHYVPAISHRIFTGNQQKEG-PVEINLKGFGIGNGLTDPEVQYKYYPDMAYNNTYGVKAVSYPVYLAMKAAVSPCVGMISSCQT--TKAACLAAQTFCN 286
[Close]
BLAST of NO03G05670 vs. NCBI_GenBank
Match: ETP43878.1 (hypothetical protein F442_09507, partial [Phytophthora parasitica P10297])

HSP 1 Score: 285.8 bits (730), Expect = 2.500e-73
Identity = 144/250 (57.60%), Postives = 174/250 (69.60%), Query Frame = 0 
Query:   68 LVGEDVETKLCDPDVNSQAGYFKITGSKDKNYFYWFFESRSSPSTDPFIIWLSGGPGCSSTLALLMENGPCSVNANGNDTIPNPNSWTNHANMMWIDQPAGVGFSYQSSADSVTDSEDQVAEDIYQFLQSFFTANPQFTNNDFYVFGESYGGHFVPAVGHKIFMENQRNKGRAIMINLKGLGIGNGLTDPELQYQFYSKYARNNTYGIELVSAEDAQKMEAAIPRCVSLIKSCQSWGGKAPCQLARLFCS 318
            L    V+   CD      +GYFKITGSK KNYFYWFFESR SPSTDP IIWL+GGPGCSS LALL ENGPCSVN++      NP SW   AN+MWIDQP GVGFSY   ++  T SE +V +D+Y FLQ FF A P++    FYVFGESY GH+VPA+ H+IF  NQ+ +G  + INLKG GIGNGLTDPE+QY++Y   A NNTYG++ VS      M+AA+  CV +I SCQ+   KA C  A+ FC+
Sbjct:   37 LTMNSVDEDFCD-STKQLSGYFKITGSKSKNYFYWFFESRGSPSTDPLIIWLTGGPGCSSILALLQENGPCSVNSD-LSLKKNPYSWNERANVMWIDQPVGVGFSYGDRSEYDT-SEKEVGDDMYHFLQEFFKALPEYQKLPFYVFGESYAGHYVPAISHRIFTGNQQKEG-PVEINLKGFGIGNGLTDPEVQYKYYPDMAYNNTYGVKAVSYPVYLAMKAAVSPCVGMISSCQT--TKAACLAAQTFCN 280
The following BLAST results are available for this feature:
BLAST of NO03G05670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM30038.11.600e-12567.66serine protease family [Nannochloropsis gaditana][more]
XP_005855029.18.500e-8260.82cathepsin A (carboxypeptidase C) [Nannochloropsis ... [more]
EWM30035.13.100e-7648.68serine carboxypeptidase [Nannochloropsis gaditana][more]
ETI45962.12.500e-7357.60hypothetical protein F443_09601 [Phytophthora para... [more]
ETK85961.12.500e-7357.60hypothetical protein L915_09396, partial [Phytopht... [more]
ETL92484.12.500e-7357.60hypothetical protein L917_09233, partial [Phytopht... [more]
ETM45792.12.500e-7357.60hypothetical protein L914_09258, partial [Phytopht... [more]
XP_008906515.12.500e-7357.60hypothetical protein PPTG_12069, partial [Phytopht... [more]
ETO74657.12.500e-7357.60hypothetical protein F444_09663 [Phytophthora para... [more]
ETP43878.12.500e-7357.60hypothetical protein F442_09507, partial [Phytopht... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05670.1NO03G05670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G05670.2NO03G05670.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05670.1NO03G05670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G05670.2NO03G05670.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05670 ID=NO03G05670|Name=NO03G05670|organism=Nannochloropsis oceanica|type=gene|length=3350bp
ACAGGCGGCTCCAGGCGAGAGCGTTGGCAGGAGCGAGTAGGAGGCAGATC
GCCGCCCTCCGTCGCCCTTCCTCCGTATCGCAGCCATGGAAACTGCACCA
AGAGCACTACGACCTGTTCTAATCTCCGTCTCCTCCTCCAGGCCTACTAT
GCCTCTTCTTCTTCTCTTGCTTCTTGGCGTGGTAGCCATGGTCTCGTCGT
CGATATTGGACAGAAAGAGCAATGCATGGCACGCGCGGTTTCCGCAACGG
GGCTGGCTTTGGGAGAACAGAGAATATATTGGCAGGCTGGTTGGAGAGGA
TGgtgcgtacacgaatatgtaggaatgggaatctttcggtttaacagaat
agattatccgtatatgttggggttatctgcatgctgtgagaggagaggca
atcagagaggagtggctgcccttttcaccttgctatcttgttttctcaca
ctctctttcaccttatcctcctcactcttcgtatcgtctgcagTCGAGAC
GAAACTGTGCGATCCGGACGTCAACTCGCAAGCAGGCTATTTCAAAATCA
CCGGAAGCAAGGACAAAAACTgtacgtataaagaaaattgggataaagga
agggaggaaatgctacttgttcgctaccttccttcccacacacttaaaat
tttaacgtatcttataattgactgtcgcagACTTCTACTGGTTCTTCGAG
TCCCGCTCAAGCCCCTCGACAGATCCTTTCATTATCTGGCTCTCGGGCGG
TCCAGgtaaggccaccagttccctccctgccctccctcccatcttccctt
cctttcaccgtactcaaattatcttcaatatgtaaacaatgactcataaa
gGTTGCTCATCCACCCTGGCCCTTTTAATGGAGAACGGCCCCTGCAGCGT
CAACGCCAACGGGAACGACACCATCCCTAACCCCAACTCCTGGACCAATC
ACgtaaggcggaaataaggggaaatgaatgtaaagcagttgagatggaga
gaaggtcccttatctcgatcatctggctctgagtttacatcattttcatc
gccatttcataaattaattgacacgtgaactttctcctttcccccctccc
actctccctccatctctcgctatcccagGCCAACATGATGTGGATCGATC
AGCCCGCGGGCGTCGGATTCTCCTATCAATCTTCGGCGGACAGCGTCACA
GATTCGGAGGATCAGGTCGCCGAGGACATATATCAGTTCCTCCAATCCTT
CTTCACGGCCAACCCTCAGTTCACGAACAACGATTTTTATGTCTTCGGGG
AGAGTTATGgtgggtgccggcagggatgaaggggggaagggaggaagaga
acaaagagacaggagaagggagagagaaatctaccgacgccattccccct
ttcactttcctatcgattctctaaatcatctttcccgctctctcccttcc
tattgcagGCGGGCACTTTGTCCCGGCGGTGGGGCACAAGATTTTCATGG
AAAACCAACGGAACAAAGGCCGCGCTATCATGATCAATTTGAAGGGGCTT
GGCATCGGCAACGGGCTCACTGgtaagggataagaagaaaaaggaaggga
ggggagggaaagggagggaaagggagggaaagagagggacggaggggaga
gatacgggaacgatagcccgtacatgaaatagacattcacagctggccac
caccacatcctccttccctccctccctccctccctcgttccagACCCGGA
GCTCCAGTATCAATTCTACTCGAAGTACGCCCGCAACAACACCTACGGCA
TCGAATTAGTGTCGGCCGAGGATGCGCAGAAAATGGAAGCCGgtacgtag
gggaggaatgaggggaggataagaaatttgaaggaaacgtgtagcagatc
acacgacaaggcgttttcatcttttttcgaagctcttatactccctcaaa
cgttttccctctcgtcctctccacccgtccctcacagCCATTCCCCGGTG
CGTGTCTCTGATCAAATCCTGCCAGTCCTGGGGAGGCAAGGCGCCCTGTC
AGCTGGCCCGCCTTTTTTGCAGCAAGTACATCTTGGAGTACTTCCCCGTA
GGTGAGTATAGAGAGAGGGAGGGATCAAAGGAGAAAGGATGGGAGGGAGG
AAGGGAGGGGAAAGTGGATGTTGCCCTACAGCGCAAACGAATGAATGGTG
ACGAACGTGCTAGGTGGGTCTGCAAACCGACCGTGACTCACCCTCGATCC
ATACTTGACTCCCTTTGCTCCCTCCTTCCCTCCCTTCCCCAGGCCGACGC
AACATCTACGACATCCGGCGAGACTGTTCCAACCCTCCCATCTGCTATAA
TTTCGACCCCATCGAGAAGTGGCTCAACATACCTAGCATTCAGTCTGCTC
TGCATGTGCGGAAGAGTAAGTCGACAACACTCCCTTCTACCCTCCCTCTC
TCTCAGATCGACTCACTCACAATTTTCAACGCCCTCCCTCCCTGCCGCCC
TCCCTTGTTCCTTCCAGAGCCAGGGAACGACATGGGCCGGTGGCGTGTGT
GTAGCGACGATGTGAGCATCCAGTTTTCCGGGGACGTGATGCTCAGCTTT
GACAAGATGCTTGTTCCCTTGCTCGAGTCAGGCATCAAGGTAGACGGAAG
GAGGGAGGAAGGGACGGATGGAGGGAAGGGACAATAATAAGGGTGGAGGC
TAAACCTTGCACTACTTGGAGGTCTCTCACCTCCTCTCTCCTTCCCTCCC
TCCCTACCTTCTTCTCATTTGGGCTCAGGTCTTGAATTATGCCGGGGACG
CGGACTTCATCTGCAATCACATGGGGGTGGAGGCCTGGAGCGATGCCCTG
GTTTGGAAGGGGCAAGAGGCATTCCAAGCCACCACAGGCAACGTATGGAT
AACCGAGGACGGAAAAGAGGGAGGAATAGTGCGGTCTGCGGAGGGATTCA
CGTTTTTGAGGATGTTTGAGAGTGGCCACATGTGTCCTTTTGACCAGCCA
GCGGTGAGTGCTGAGATGGTGGCGGCCTGGACGGGCGTGGGGGGGGGGGG
GTAAAAGATAGGTGGGAGGCGGTGGTGCTGGCACCTGAGAAAGAAGGGAA
AGAGGAAGAGGTCGGTGGATTGGAAGGAGAGGAAGAGGAGAAGGAGGGGC
CAGACAAAGAAGCTGTGCAAGAGGTAGAGGTGGTGGCGGTCTAGAAGAGG
AAGGCGAATAAAGGCAGGGAGGGGGACGTGAGAGGGGTGACGAAACGAAT
GAAGAAATTGACAAATTCGTCGTTGGAGCGAGAAGTGATCCATGACTTGA
TTTAGGACACTGAAAACACGACCAAATGATGGCAGGAAAATAGAAAAATG
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protein sequence of NO03G05670.1

>NO03G05670.1-protein ID=NO03G05670.1-protein|Name=NO03G05670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=500bp
METAPRALRPVLISVSSSRPTMPLLLLLLLGVVAMVSSSILDRKSNAWHA
RFPQRGWLWENREYIGRLVGEDVETKLCDPDVNSQAGYFKITGSKDKNYF
YWFFESRSSPSTDPFIIWLSGGPGCSSTLALLMENGPCSVNANGNDTIPN
PNSWTNHANMMWIDQPAGVGFSYQSSADSVTDSEDQVAEDIYQFLQSFFT
ANPQFTNNDFYVFGESYGGHFVPAVGHKIFMENQRNKGRAIMINLKGLGI
GNGLTDPELQYQFYSKYARNNTYGIELVSAEDAQKMEAAIPRCVSLIKSC
QSWGGKAPCQLARLFCSKYILEYFPVGRRNIYDIRRDCSNPPICYNFDPI
EKWLNIPSIQSALHVRKKPGNDMGRWRVCSDDVSIQFSGDVMLSFDKMLV
PLLESGIKVLNYAGDADFICNHMGVEAWSDALVWKGQEAFQATTGNVWIT
EDGKEGGIVRSAEGFTFLRMFESGHMCPFDQPAVSAEMVAAWTGVGGGG*
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protein sequence of NO03G05670.2

>NO03G05670.2-protein ID=NO03G05670.2-protein|Name=NO03G05670.2|organism=Nannochloropsis oceanica|type=polypeptide|length=481bp
METAPRALRPVLISVSSSRPTMPLLLLLLLGVVAMVSSSILDRKSNAWHA
RFPQRGWLWENREYIGRLVGEDVETKLCDPDVNSQAGYFKITGSKDKNYF
YWFFESRSSPSTDPFIIWLSGGPGCSSTLALLMENGPCSVNANGNDTIPN
PNSWTNHANMMWIDQPAGVGFSYQSSADSVTDSEDQVAEDIYQFLQSFFT
ANPQFTNNDFYVFGESYGGHFVPAVGHKIFMENQRNKGRAIMINLKGLGI
GNGLTDPELQYQFYSKYARNNTYGIELVSAEDAQKMEAAIPRCVSLIKSC
QSWGGKAPCQLARLFCSKYILEYFPVGEYREREGSKEKGWEGGREGKVDV
ALQRKRMNGDERARWVCKPTVTHPRSILDSLCSLLPSLPQADATSTTSGE
TVPTLPSAIISTPSRSGSTYLAFSLLCMCGRVSRQHSLLPSLSLRSTHSQ
FSTPSLPAALPCSFQSQGTTWAGGVCVATM*
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