NO03G05250, NO03G05250 (gene) Nannochloropsis oceanica

Overview
NameNO03G05250
Unique NameNO03G05250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2411
Alignment locationchr3:1497065..1499475 -

Link to JBrowse

Properties
Property NameValue
DescriptionZeta-carotene desaturase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1497065..1499475 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016117carotenoid biosynthetic process
GO:0055114oxidation-reduction process
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016719carotene 7,8-desaturase activity
GO:0016491oxidoreductase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036188FAD/NAD-bd_sf
IPR014103Zeta_caro_desat
IPR002937Amino_oxidase
Homology
[Close]
BLAST of NO03G05250 vs. NCBI_GenBank
Match: OEU09346.1 (zeta-carotene desaturase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 637.9 bits (1644), Expect = 3.400e-179
Identity = 331/601 (55.07%), Postives = 419/601 (69.72%), Query Frame = 0 
Query:    8 SRRGTTAAAMATLLFASSCTTSAFLLPATSPVSAPSSRLPTAGFRQRATTVMSSVITQPVEAIRGSDKEKLLDLSVLDRAMSGPPANLRVKNKNTEQLRVGIIGGGLGGLITAMDLAEAGHQVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGIFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPINGLKAFATTTQLEIGDKIANAVALATSPVVKALFNFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDNISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILDYLKARGVKLHLNSRIQDLVYDTDAGSGKPTRVKGFTLSGKANTEDGKEAGAAGGVGVAGEERLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYKLTAVPVTTVQLRFNGWVTELQDMEKMKEVSGDKSNGKAPGIDNLLYSADAEFSCFADLALTSPAEYYKEGEGTLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADVILRDA 609
            SR  T   A+   +  SSC  SAF+  +TS  SA          R  + T      +   +   G+D    L+  ++ RA +GP         N E+L++GI+G GL G+I AMDLA+AGHQVE+FE R F GGKV SW DKD NHIEMGLHVFFGCYYNLFGIMKR G F+ +LR+KDH H+F+N GG++G LDFRF  IGAPI+GL AFA T QL I DK  NAV L TSP+V+AL +FD  M+ VR LD I+F+EWF + GG RGS+ RMWDPIAYALGF+DCD ISAR MLTIF LFA+R+EASVLRM +GSP T LH+PI+ YL+ R VK++L+S  ++LV+D D  +G PTRV+G  +  K    +                  FD V+ A DVPGI+K+LP+SFR+   FD IY+L  VP+ TVQ+RF+GWVTEL D  +M ++SGD+S+G+  GIDNLLYSAD EFSCFADLA+TSP EYYKEGEG+L+Q V     +    S E++ E  + Q+  +FPS+  L CTW++VVKLGQSLYREAPG D +RPKQ +P+ NF+LAGSYTYQDY+DSMEGAT+SGL+ AD ++  A
Sbjct:    7 SRGFTLVTAVVATMAISSC--SAFMPKSTSRSSA---------VRSLSDTATDGFTSDGAKTQIGND--SFLNEDLMARAQNGPGV------VNKEKLKIGIVGAGLAGMIAAMDLADAGHQVEMFELRPFVGGKVSSWQDKDDNHIEMGLHVFFGCYYNLFGIMKRTGGFDKNLRIKDHVHTFVNDGGKLGALDFRF-PIGAPISGLAAFAATEQLGIEDKFHNAVRLGTSPIVRALVDFDGGMDMVRELDDITFTEWFTQLGGKRGSLDRMWDPIAYALGFLDCDTISARAMLTIFMLFAIRTEASVLRMLDGSPQTGLHDPIIKYLEDRDVKINLSSPCRELVHDLDPETGLPTRVRGIKIGAKNVYHE------------------FDTVICALDVPGIKKVLPKSFRQYDMFDKIYELETVPIATVQVRFDGWVTELNDDARMMDISGDQSDGRGGGIDNLLYSADTEFSCFADLAVTSPGEYYKEGEGSLIQAVFDA--RATKRSQEQLVEDCIAQLHKVFPSSSKLNCTWSSVVKLGQSLYREAPGQDKFRPKQATPISNFFLAGSYTYQDYLDSMEGATRSGLMVADEVIARA 567
[Close]
BLAST of NO03G05250 vs. NCBI_GenBank
Match: XP_005767829.1 (hypothetical protein EMIHUDRAFT_421941 [Emiliania huxleyi CCMP1516] >EOD15400.1 hypothetical protein EMIHUDRAFT_421941 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 637.5 bits (1643), Expect = 4.400e-179
Identity = 315/528 (59.66%), Postives = 404/528 (76.52%), Query Frame = 0 
Query:  103 EQLRVGIIGGGLGGLITAMDLAEAGHQVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGIFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPINGLKAFATTTQLEIGDKIANAVALATSPVVKALFNFDAAMEDVRALDGISFSEWFLR-----KGGSRGSMTRMWDPIAYALGFIDCDNISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILDYLKARGVKLHLNSRIQDLVYDTDAGSGKPTRVKGFTLSGKANTEDGKEAGAAGGVGVAGEERLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYKLTAVPVTTVQLRFNGWVTELQDMEKMKEVSGDKSNGKAPGIDNLLYSADAEFSCFADLALTSPAEYYKEGEGTLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADVILRDAKEI---KERAESQGVGA 623
            ++L++G++G GL G++ AMDLA+AGH VEIFE R F GGKV SW+D+DGNHIEMGLHVFFGCYYNLFGIM+R G ++  +RLK+HTH+FIN GG VG LDFRF  IGAP++GL+AFA T QL + DK+ANA+ L TSP+V+AL +FD  M+ VR LD I+F+EWF +     KG +RGS+ RMWDPIAYALGFIDCD+ISAR MLTIF LFA+R+EASVLRM EGSP TYLH+PI+ YL+ R VK++L + ++DLV++ DA SG+PTRV G         +D  E G         E R FD VV A D+PGI+ +LP SFRK+  FD IY L  VP+ TVQ+RF+GWVTE+ D  +M++V+GD+S+G+  GIDNLLYSADAEFSCFADLALTSP EYYKEGEG+L+Q V    ++ +  S  ++ E  + Q+ DLFPS++GL+CTW+ V KLGQSLYRE  G D +RP Q +P++NF+LAGSYTYQDY+DSMEGAT+SGL+ AD I+  A ++    E+A++  VGA
Sbjct:   70 KKLKIGVVGAGLAGMVAAMDLADAGHDVEIFELRPFVGGKVSSWMDRDGNHIEMGLHVFFGCYYNLFGIMQRTGSYD-LMRLKEHTHTFINSGGGVGALDFRF-PIGAPVSGLQAFARTEQLGVSDKLANALRLGTSPIVRALVDFDGGMDMVRELDDITFTEWFTQLEGPLKGSARGSIDRMWDPIAYALGFIDCDHISARAMLTIFMLFAIRTEASVLRMLEGSPQTYLHDPIIKYLEERDVKINLRTPVRDLVHEVDA-SGRPTRVSGI-------KDDAVEDGD------TSEVREFDAVVCALDLPGIKGVLPPSFRKMDFFDKIYNLDTVPIATVQVRFDGWVTEMHDEARMRDVAGDQSDGRGAGIDNLLYSADAEFSCFADLALTSPGEYYKEGEGSLIQAVF--DERAVKRSESQLVEDCIAQLNDLFPSSKGLKCTWSKVTKLGQSLYREKTGQDKFRPTQATPIDNFFLAGSYTYQDYLDSMEGATRSGLMVADEIVARADKLAAAAEKAKATPVGA 579
[Close]
BLAST of NO03G05250 vs. NCBI_GenBank
Match: KIF35873.1 (zeta-carotene desaturase [Hassallia byssoidea VB512170])

HSP 1 Score: 636.7 bits (1641), Expect = 7.500e-179
Identity = 318/506 (62.85%), Postives = 391/506 (77.27%), Query Frame = 0 
Query:  105 LRVGIIGGGLGGLITAMDLAEAGHQVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGIFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPINGLKAFATTTQLEIGDKIANAVALATSPVVKALFNFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDNISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILDYLKARGVKLHLNSRIQDLVYDTDAGSGKPTRVKGFTLSGKANTEDGKEAGAAGGVGVAGEERLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYKLTAVPVTTVQLRFNGWVTELQDMEKMKEVSGDKSNGKAPGIDNLLYSADAEFSCFADLALTSPAEYYKEGEGTLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADVILRDAKE 611
            +RV I+G GL GL TA+DLA+AG +V+IFE+R F GGKVGSWVD DGNH+EMGLHVFFGCYY LF +MK++G F+ +LRLK+HTH+FINKGG+ GELDFRF   GAP NG KAF TT+QL + DK+ NA+ALATSPVV+ L +FD AM ++R LD +SF++WF   GGS GS+ RMW+PIAYALGFIDC+N+SARCMLTIFQLFAVR+EAS+LRM EGSP  YLH+PIL+YL+ARG K++   +++++ +     S + T V G T++ +  TE+   A               D  V ACDVPGIQ+++P+ +RK  EFDNIYKL AVPV TVQLRF+GWVTELQD EK K+++       A GIDNLLY+ADA+FSCFAD+ALTSPA+YY+EGEG+LLQ VLTPGD ++  S E IA   LKQV +LFPS+R L  TW +VVKL QSLYREAPGMDVYRP QK+PV NF+LAGSYT QDYIDSMEGAT SG   A VIL + K+
Sbjct:    1 MRVAIVGAGLAGLATAVDLADAGCEVQIFESRPFVGGKVGSWVDNDGNHVEMGLHVFFGCYYQLFELMKKVGAFD-NLRLKEHTHTFINKGGQTGELDFRF-FTGAPFNGFKAFFTTSQLSVLDKLQNAIALATSPVVRGLVDFDGAMRNIRNLDKVSFADWFRSHGGSNGSIKRMWNPIAYALGFIDCENMSARCMLTIFQLFAVRTEASILRMLEGSPYEYLHKPILEYLEARGTKVYTRRQVREIKFT----SSEETHVTGITVA-QGETEENITA---------------DAYVFACDVPGIQRIIPQEWRKWSEFDNIYKLEAVPVATVQLRFDGWVTELQDAEKRKQLN------HAAGIDNLLYTADADFSCFADMALTSPADYYREGEGSLLQLVLTPGDAFIKQSNEAIASHVLKQVHELFPSSRELNMTWYSVVKLAQSLYREAPGMDVYRPHQKTPVPNFFLAGSYTQQDYIDSMEGATISGRRAAKVILENVKK 478
[Close]
BLAST of NO03G05250 vs. NCBI_GenBank
Match: WP_106255280.1 (9,9'-di-cis-zeta-carotene desaturase [Leptolyngbya frigida] >PSB32673.1 9,9'-di-cis-zeta-carotene desaturase [Leptolyngbya frigida ULC18])

HSP 1 Score: 636.3 bits (1640), Expect = 9.800e-179
Identity = 316/501 (63.07%), Postives = 384/501 (76.65%), Query Frame = 0 
Query:  105 LRVGIIGGGLGGLITAMDLAEAGHQVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGIFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPINGLKAFATTTQLEIGDKIANAVALATSPVVKALFNFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDNISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILDYLKARGVKLHLNSRIQDLVYDTDAGSGKPTRVKGFTLSGKANTEDGKEAGAAGGVGVAGEERLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYKLTAVPVTTVQLRFNGWVTELQDMEKMKEVSGDKSNGKAPGIDNLLYSADAEFSCFADLALTSPAEYYKEGEGTLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADVIL 606
            +RV I+G GL GL  A++LA+AGH+VEIFE+R F GGKVGSWVD DGNH+EMGLHVFFGCYYNLF +MK++G FES LR K+HTH+FIN+GG+ G LDFRF   GAP NGLKAF TT+QL + DK+ NA+AL TSP+V+ L +FD AM  +R LDGISF++WF + GGS GS+ RMW+PIAYALGFID +NISARCMLTIFQ FA R+EASVLRM EGSP+ YLH+PI+DYL+ARG K+H   RI+D+++D   G G  T V G  ++     +D +E   A            D  +AACD+PGIQ+LLP  +R  +EFDNIYKL AVPV TVQLRF+GWVTELQD E+ K++        A GIDNLLY+ DA+FSCFAD+ALTSP+ YY+EGEG+L+Q VLTPGD ++  S E IA+  LKQV DLFPS+R L+ TW +VVKL QSLYREAPGMD YRP QK+P+ NF+LAGSYT QDYIDSMEGAT SG   A  IL
Sbjct:    1 MRVAIVGAGLAGLAAAVELADAGHEVEIFESRPFVGGKVGSWVDADGNHLEMGLHVFFGCYYNLFDLMKKVGAFESLLR-KEHTHTFINRGGQTGMLDFRF-ITGAPFNGLKAFFTTSQLSVQDKVQNAIALGTSPIVRGLVDFDGAMRSIRELDGISFADWFRQHGGSNGSLKRMWNPIAYALGFIDTENISARCMLTIFQFFAARTEASVLRMLEGSPHEYLHKPIVDYLEARGTKIHTRRRIRDVLFD---GKGDQTHVTGLVVA----KDDMEETITA------------DAYLAACDIPGIQRLLPAEWRTWKEFDNIYKLDAVPVATVQLRFDGWVTELQDAEQRKQLD------HAAGIDNLLYTPDADFSCFADMALTSPSNYYREGEGSLMQLVLTPGDPFIKQSNEAIAQHVLKQVHDLFPSSRDLKMTWYSVVKLAQSLYREAPGMDPYRPAQKTPIANFFLAGSYTQQDYIDSMEGATISGRQAAQAIL 474
[Close]
BLAST of NO03G05250 vs. NCBI_GenBank
Match: WP_015130469.1 (9,9'-di-cis-zeta-carotene desaturase [Calothrix sp. PCC 7507] >AFY34667.1 zeta-carotene desaturase [Calothrix sp. PCC 7507])

HSP 1 Score: 634.8 bits (1636), Expect = 2.900e-178
Identity = 318/506 (62.85%), Postives = 391/506 (77.27%), Query Frame = 0 
Query:  105 LRVGIIGGGLGGLITAMDLAEAGHQVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGIFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPINGLKAFATTTQLEIGDKIANAVALATSPVVKALFNFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDNISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILDYLKARGVKLHLNSRIQDLVYDTDAGSGKPTRVKGFTLSGKANTEDGKEAGAAGGVGVAGEERLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYKLTAVPVTTVQLRFNGWVTELQDMEKMKEVSGDKSNGKAPGIDNLLYSADAEFSCFADLALTSPAEYYKEGEGTLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADVILRDAKE 611
            +RV I+G GL GL TA+DLA+AG +V+IFE+R F GGKV SWVD DGNH+EMGLHVFFGCYY LF +MK++G  E +LRLK+H H+FINKGGR G LDFRF   GAP+NGLKAF TT+QL + DK+ NA+AL TSP+V+ L +FD AM+++R LD ISF++WF R GGS GS+ RMW+PIAYALGFIDC+NISARCMLTIFQ FAVR+EAS+LRM EGSP+ YLH+PIL+YL+ARG ++H   +++++ + TD  SG+ T V G  ++                 G A E    D  V ACDVPGIQ++LP+ +RK  EFDNIYKL AVPV TVQLRF+GWVTELQD E+ K+++       A GIDNLLY+ADA+FSCFADLALTSPA+YY++G+G+LLQ VLTPGD ++  S E IA+  LKQV +LFPS+R L+ TW +VVKL QSLYRE PGMDVYRP QK+PV NF+LAGSYT QDYIDSMEGAT SG   A VIL  AK+
Sbjct:    1 MRVAIVGAGLAGLATAVDLADAGCEVQIFESRPFVGGKVSSWVDGDGNHVEMGLHVFFGCYYQLFDLMKKVGALE-NLRLKEHKHTFINKGGRTGALDFRF-FTGAPLNGLKAFFTTSQLSLLDKLQNAIALGTSPIVRGLVDFDGAMQNIRNLDKISFADWFRRHGGSEGSIKRMWNPIAYALGFIDCENISARCMLTIFQFFAVRTEASILRMLEGSPHEYLHKPILEYLEARGTQIHTRRQVREIQF-TD--SGEQTHVTGIVVA----------------QGDAVETITADAYVFACDVPGIQRILPQEWRKWSEFDNIYKLDAVPVATVQLRFDGWVTELQDGEQRKQLN------HAAGIDNLLYTADADFSCFADLALTSPADYYRQGQGSLLQLVLTPGDPFIKQSNEAIAQHVLKQVYELFPSSRELKMTWYSVVKLAQSLYREGPGMDVYRPDQKTPVSNFFLAGSYTQQDYIDSMEGATISGRRAAKVILSSAKK 479
[Close]
BLAST of NO03G05250 vs. NCBI_GenBank
Match: WP_089130405.1 (9,9'-di-cis-zeta-carotene desaturase [Tolypothrix sp. NIES-4075] >GAX44840.1 amine oxidase [Tolypothrix sp. NIES-4075])

HSP 1 Score: 634.8 bits (1636), Expect = 2.900e-178
Identity = 316/506 (62.45%), Postives = 391/506 (77.27%), Query Frame = 0 
Query:  105 LRVGIIGGGLGGLITAMDLAEAGHQVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGIFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPINGLKAFATTTQLEIGDKIANAVALATSPVVKALFNFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDNISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILDYLKARGVKLHLNSRIQDLVYDTDAGSGKPTRVKGFTLSGKANTEDGKEAGAAGGVGVAGEERLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYKLTAVPVTTVQLRFNGWVTELQDMEKMKEVSGDKSNGKAPGIDNLLYSADAEFSCFADLALTSPAEYYKEGEGTLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADVILRDAKE 611
            +RV I+G GL GL TA+DLA+AG +V+IFE+R F GGKVGSWVD DGNH+EMGLHVFFGCYY LF +MK++G F+ +LRLK+HTH+FINKGG+ GELDFRF   GAP NG KAF TT+QL + DK+ NA+ALATSPVV+ L +FD AM ++R LD +SF++WF   GGS GS+ RMW+PIAYALGFIDC+N+SARCMLTIFQLFAVR+EAS+LRM EGSP  YLH+PIL+YL+ARG K++   +++++ +     S + T V G T++ +  TE+   A               D  V ACDVPGIQ+++P+ +RK  EFDNIYKL AVPV TVQLRF+GWVTELQD +K K+++       A GIDNLLY+ADA+FSCFAD+ALTSPA+YY+EGEG+LLQ VLTPGD ++  S E IA   LKQV +LFPS+R L  TW +VVKL QSLYREAPGMDVYRP QK+P+ NF+LAGSYT QDYIDSMEGAT SG   A VIL + K+
Sbjct:    1 MRVAIVGAGLAGLATAVDLADAGCEVQIFESRPFVGGKVGSWVDNDGNHVEMGLHVFFGCYYQLFELMKKVGAFD-NLRLKEHTHTFINKGGQTGELDFRF-FTGAPFNGFKAFFTTSQLSVLDKLQNALALATSPVVRGLVDFDGAMRNIRNLDKVSFADWFRSHGGSNGSIKRMWNPIAYALGFIDCENMSARCMLTIFQLFAVRTEASILRMLEGSPYEYLHKPILEYLEARGTKVYTRRQVREIKFT----SSEETHVTGITVA-QGETEENITA---------------DAYVFACDVPGIQRIIPQEWRKWSEFDNIYKLEAVPVATVQLRFDGWVTELQDAQKRKQLN------HAAGIDNLLYTADADFSCFADMALTSPADYYREGEGSLLQLVLTPGDAFIKQSNEAIASHVLKQVHELFPSSRELNMTWYSVVKLAQSLYREAPGMDVYRPNQKTPIPNFFLAGSYTQQDYIDSMEGATISGRRAAKVILENVKK 478
[Close]
BLAST of NO03G05250 vs. NCBI_GenBank
Match: WP_015220074.1 (9,9'-di-cis-zeta-carotene desaturase [Cyanobacterium aponinum] >AFZ54350.1 zeta-carotene desaturase [Cyanobacterium aponinum PCC 10605])

HSP 1 Score: 632.5 bits (1630), Expect = 1.400e-177
Identity = 314/507 (61.93%), Postives = 388/507 (76.53%), Query Frame = 0 
Query:  105 LRVGIIGGGLGGLITAMDLAEAGHQVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGIFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPINGLKAFATTTQLEIGDKIANAVALATSPVVKALFNFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDNISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILDYLKARGVKLHLNSRIQDLVYDTDAGSGKPTRVKGFTLSGKANTEDGKEAGAAGGVGVAGEERLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYKLTAVPVTTVQLRFNGWVTELQDMEKMKEVSGDKSNGKAPGIDNLLYSADAEFSCFADLALTSPAEYYKEGEGTLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADVILRDAKEI 612
            +RV I+G GL GL TA++L +AG +VEIFE+R F GGKVGSWVD DGNHIEMGLHVFFGCYYNLF +M+++G  E +LRLK+HTH+FIN+GGRVGELDFRF   GAP NGLKAF TT+QL   DKIAN++AL TSP+V+ L +F  AM  +R LD ISF++WF + GG++GS+ +MW+PIAYALGFID +NISARCMLTIFQ FA ++EASVLRM EGSP+ YLH+PI++YL++RGVK+H   R+++++Y      G  T V G  L  K  TE               E  + D  V ACDVPGIQKL+P+ +RK  EFDNIYKLTAVPV TVQLRF+GWVTEL D +K +++       KA GIDNLLY+ADA+FSCF+DLAL+SPA+YY+EG+G+LLQ VLTPGD ++  S E IA   LKQV +LFPS+R L  TW +VVKL QSLYREAPGMDVYRP Q +P+ NF+LAGSYT QDYIDSMEGAT SGL  A  IL+  +++
Sbjct:    1 MRVAIVGAGLAGLATAIELVDAGCEVEIFESRPFVGGKVGSWVDNDGNHIEMGLHVFFGCYYNLFALMEKVGAIE-NLRLKEHTHTFINQGGRVGELDFRF-PTGAPFNGLKAFFTTSQLSTVDKIANSLALGTSPIVRGLIDFHGAMRQIRNLDSISFADWFRKHGGNQGSLDKMWNPIAYALGFIDTENISARCMLTIFQFFAAKTEASVLRMLEGSPHEYLHKPIINYLESRGVKIHTRRRVREILYQ----EGDDTTVTGL-LIAKGETE---------------EVIIADTYVCACDVPGIQKLIPDGWRKWSEFDNIYKLTAVPVATVQLRFDGWVTELNDPQKRRQLE------KAEGIDNLLYTADADFSCFSDLALSSPADYYREGQGSLLQLVLTPGDPFIKESNENIANHVLKQVHELFPSSRELNMTWYSVVKLAQSLYREAPGMDVYRPSQATPISNFFLAGSYTQQDYIDSMEGATISGLQAARAILKSNQKV 479
[Close]
BLAST of NO03G05250 vs. NCBI_GenBank
Match: WP_096574010.1 (MULTISPECIES: 9,9'-di-cis-zeta-carotene desaturase [Nostocales] >BAY96860.1 amine oxidase [Tolypothrix tenuis PCC 7101] >BAZ72632.1 amine oxidase [Aulosira laxa NIES-50])

HSP 1 Score: 632.5 bits (1630), Expect = 1.400e-177
Identity = 317/506 (62.65%), Postives = 390/506 (77.08%), Query Frame = 0 
Query:  105 LRVGIIGGGLGGLITAMDLAEAGHQVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGIFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPINGLKAFATTTQLEIGDKIANAVALATSPVVKALFNFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDNISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILDYLKARGVKLHLNSRIQDLVYDTDAGSGKPTRVKGFTLSGKANTEDGKEAGAAGGVGVAGEERLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYKLTAVPVTTVQLRFNGWVTELQDMEKMKEVSGDKSNGKAPGIDNLLYSADAEFSCFADLALTSPAEYYKEGEGTLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADVILRDAKE 611
            +RV I+G GL GL TA+DLA+AG +++IFE+R F GGKVGSWVD DGNHIEMGLHVFFGCYY LF +MK++G  + +LRLK+HTH+FINKGGR G LDFRF   GAP NGLKAF TT+QL + DK+ NA+AL TSP+V+ L +FD AM+ +R LD ISF++WF   GGS+GS+ RMW+PIAYALGFIDC+NISARCMLTIFQ FAVR+EAS+LRM EGSP+ YLH+PIL+YL ARG ++H   +++++ +   A S K TRV G  ++ + +TE+   A               D  V ACDVPGIQ++LP+ +RK  EFDNIYKL AVPV TVQLRF+GWVTELQD EK K+++       A GIDNLLY+ADA+FSCF+DLAL+SPA+YY+ G+G+LLQ VLTPGD ++  S E IA+  L QV +LFPS+R L  TW NVVKL QSLYREAPGMDVYRP QK+PV NF+LAGSYT QDYIDSMEGAT SG   A VIL + K+
Sbjct:    1 MRVAIVGAGLAGLATAVDLADAGCEIQIFESRPFVGGKVGSWVDGDGNHIEMGLHVFFGCYYQLFDLMKKVGAID-NLRLKEHTHTFINKGGRTGALDFRF-FTGAPFNGLKAFFTTSQLSLQDKLQNAIALGTSPIVRGLVDFDGAMQTIRDLDKISFADWFRSHGGSQGSIKRMWNPIAYALGFIDCENISARCMLTIFQFFAVRTEASILRMLEGSPHEYLHKPILEYLAARGTQVHTRRQVREIQF---AESDKETRVTGIVVA-QGDTEEVITA---------------DAYVFACDVPGIQRILPQQWRKWSEFDNIYKLDAVPVATVQLRFDGWVTELQDEEKRKQLN------HAAGIDNLLYTADADFSCFSDLALSSPADYYRPGQGSLLQLVLTPGDPFIKQSNEAIAQHVLGQVHELFPSSRELNMTWYNVVKLAQSLYREAPGMDVYRPNQKTPVPNFFLAGSYTQQDYIDSMEGATISGRRAAKVILENVKQ 479
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BLAST of NO03G05250 vs. NCBI_GenBank
Match: WP_066118811.1 (9,9'-di-cis-zeta-carotene desaturase [Geminocystis sp. NIES-3709] >BAQ65306.1 pro-zeta-carotene desaturase [Geminocystis sp. NIES-3709])

HSP 1 Score: 631.3 bits (1627), Expect = 3.200e-177
Identity = 314/502 (62.55%), Postives = 391/502 (77.89%), Query Frame = 0 
Query:  105 LRVGIIGGGLGGLITAMDLAEAGHQVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGIFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPINGLKAFATTTQLEIGDKIANAVALATSPVVKALFNFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDNISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILDYLKARGVKLHLNSRIQDLVYDTDAGSGKPTRVKGFTLSGKANTEDGKEAGAAGGVGVAGEERLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYKLTAVPVTTVQLRFNGWVTELQDMEKMKEVSGDKSNGKAPGIDNLLYSADAEFSCFADLALTSPAEYYKEGEGTLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADVILR 607
            +RV I+G GL GL TA+DL +AG +VEIFE+R F GGKVGSWVD DGNHIEMGLHVFFGCYYNLF +M+++G  E +LRLK+HTH+FIN+GGRVGELDFRF   GAP NGLKAF TT+QL + DKIAN++AL TSP+V+ L +F+ AM ++R LDGISF++WF + GG++GS+ +MW+PIAYALGFID +NISARCMLTIFQ FAV++EASVLRM EGSP+ YLH+PI++YL+++GVK+H   +++++ Y      G+ T V G  L  K +TE+   A               D  V ACDVPGIQK++PE +RK +EFDNIYKLTAVPV TVQLRF+GWVTEL D +K +++       KA GIDNLLY+ DA+FSCF+DLAL+SPA+YY+EGEG+LLQ VLTPGD ++  + E IA   LKQV  LFPS++ L  TW +VVKL QSLYREAPGMDVYRP QK+P+ NF+LAGSYT QDYIDSMEGAT SG   A VIL+
Sbjct:    1 MRVAIVGAGLAGLATAIDLVDAGWEVEIFESRPFVGGKVGSWVDNDGNHIEMGLHVFFGCYYNLFALMEKVGAIE-NLRLKEHTHTFINEGGRVGELDFRF-LTGAPFNGLKAFFTTSQLSLVDKIANSLALGTSPIVRGLIDFEGAMRNIRDLDGISFADWFRKHGGNQGSLDKMWNPIAYALGFIDTENISARCMLTIFQFFAVKTEASVLRMLEGSPHEYLHKPIVNYLESKGVKIHTRRQVREIKYQ----EGEDTLVTGL-LVAKGDTEELITA---------------DAYVCACDVPGIQKVIPEGWRKWKEFDNIYKLTAVPVATVQLRFDGWVTELHDEKKRQQLD------KAEGIDNLLYTCDADFSCFSDLALSSPADYYREGEGSLLQLVLTPGDPFIKETNENIANHVLKQVHKLFPSSQELNMTWYSVVKLAQSLYREAPGMDVYRPSQKTPISNFFLAGSYTQQDYIDSMEGATISGKQAAQVILQ 474
[Close]
BLAST of NO03G05250 vs. NCBI_GenBank
Match: WP_099532658.1 (9,9'-di-cis-zeta-carotene desaturase [Limnothrix sp. PR1529] >OCQ97557.1 9,9'-di-cis-zeta-carotene desaturase [Limnothrix sp. P13C2] >PIB14329.1 zeta-carotene desaturase [Limnothrix sp. PR1529])

HSP 1 Score: 631.3 bits (1627), Expect = 3.200e-177
Identity = 313/501 (62.48%), Postives = 383/501 (76.45%), Query Frame = 0 
Query:  105 LRVGIIGGGLGGLITAMDLAEAGHQVEIFEARRFAGGKVGSWVDKDGNHIEMGLHVFFGCYYNLFGIMKRLGIFESSLRLKDHTHSFINKGGRVGELDFRFGGIGAPINGLKAFATTTQLEIGDKIANAVALATSPVVKALFNFDAAMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDNISARCMLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILDYLKARGVKLHLNSRIQDLVYDTDAGSGKPTRVKGFTLSGKANTEDGKEAGAAGGVGVAGEERLFDCVVAACDVPGIQKLLPESFRKIQEFDNIYKLTAVPVTTVQLRFNGWVTELQDMEKMKEVSGDKSNGKAPGIDNLLYSADAEFSCFADLALTSPAEYYKEGEGTLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKLGQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLCADVIL 606
            +RV I+G GL GL TA+DL +AGH+VEIFEAR F GGKVGSWVD DGNH+EMGLHVFFGCY NLFG+MK++G FE +L LK+HTH+F+N+GG +GELDFRF  IGAP NGLKAF TT+QL + DK+AN++AL TSP+V+ L +F  AM+ +R LD +SF++WF   GGS GS+ RMW+PIAYALGFID +NISARCMLTIFQ FA ++EASVLRM  GSP+ YLH+PI+ Y+  RG K+HL  RI+++ Y  ++ +G+  RV G  ++                 G A E    D  VAACD+PGIQ+LLPES+RKI EFDNIYKL AVPV TVQLRF+GWVTE+QD E MK++S      KA G+DNLLYSADA+FSCFADLALTSP +YY+EG+G+LLQ VLTPGD ++  S E+  +  LKQV DLFPS+R L   W+ VVKL QSLYRE PGMD YRP QK+ +ENF+LAGSYT QDYIDSMEGAT SG   A  +L
Sbjct:    1 MRVAIVGAGLAGLATAVDLVDAGHEVEIFEARNFVGGKVGSWVDADGNHVEMGLHVFFGCYENLFGLMKKVGAFE-NLLLKEHTHTFVNRGGNLGELDFRF-PIGAPFNGLKAFFTTSQLSVADKLANSIALGTSPIVRGLVDFKGAMKTIRELDRVSFADWFRSHGGSDGSLKRMWNPIAYALGFIDTENISARCMLTIFQFFAAKTEASVLRMLAGSPDEYLHKPIVKYITDRGGKIHLRRRIREVQY-AESSNGE-IRVTGLDVAD----------------GEATERITADAYVAACDIPGIQRLLPESWRKIPEFDNIYKLEAVPVATVQLRFDGWVTEMQDPEAMKDLS------KARGLDNLLYSADADFSCFADLALTSPKDYYREGQGSLLQLVLTPGDPFIKKSNEETVQHVLKQVHDLFPSSRSLNLVWSGVVKLAQSLYREGPGMDPYRPNQKTSIENFFLAGSYTMQDYIDSMEGATLSGKQAAKALL 475
The following BLAST results are available for this feature:
BLAST of NO03G05250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OEU09346.13.400e-17955.07zeta-carotene desaturase [Fragilariopsis cylindrus... [more]
XP_005767829.14.400e-17959.66hypothetical protein EMIHUDRAFT_421941 [Emiliania ... [more]
KIF35873.17.500e-17962.85zeta-carotene desaturase [Hassallia byssoidea VB51... [more]
WP_106255280.19.800e-17963.079,9'-di-cis-zeta-carotene desaturase [Leptolyngbya... [more]
WP_015130469.12.900e-17862.859,9'-di-cis-zeta-carotene desaturase [Calothrix sp... [more]
WP_089130405.12.900e-17862.459,9'-di-cis-zeta-carotene desaturase [Tolypothrix ... [more]
WP_015220074.11.400e-17761.939,9'-di-cis-zeta-carotene desaturase [Cyanobacteri... [more]
WP_096574010.11.400e-17762.65MULTISPECIES: 9,9'-di-cis-zeta-carotene desaturase... [more]
WP_066118811.13.200e-17762.559,9'-di-cis-zeta-carotene desaturase [Geminocystis... [more]
WP_099532658.13.200e-17762.489,9'-di-cis-zeta-carotene desaturase [Limnothrix s... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005347NSK005347Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05250.1NO03G05250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|573278gene_1739Nannochloropsis oceanica (N. oceanica CCMP1779)gene
ZDSgene677Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05250.1NO03G05250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05250 ID=NO03G05250|Name=NO03G05250|organism=Nannochloropsis oceanica|type=gene|length=2411bp
AACTACAGGGACGACGGCCAGCAGCGCCATGACAAGCCCCATCAAGACAA
GTAGAAGAGGCACGACCGCGGCCGCCATGGCCACGCTTCTCTTCGCCTCC
TCCTGCACGACCTCGGCTTTCCTCCTCCCTGCCACCTCCCCCGTCTCCGC
CCCCTCCTCCCGTCTCCCGACTGCAGGCTTTCGACAGAGGGCAACTACGG
TAATGTCTTCTGTGATCACGCAACCGGTCGAGGCAATCCGTGGCTCGGAC
AAGGAGAAGCTCTTGGATCTGTCCGTATTGGATCGTGCTATGTCTGGCCC
TCCCGCCAACTTGCGGGTCAAGAACAAGAATACGGAGCAGCTTCGTGTAG
GGATAATTGGTGGAGGCTTGGGGGGTTTAATTACGGCGATGGACTTGGCT
GAGGCAGGTCACCAGGTCGAGATTTTTGAGGCGCGGCGTTTTGCGGGGGG
GAAGGTCGGGTCGTGGGTGGACAAGGACGGGAACCACATTGAGATGGgtg
agttgagagaagagggagggaacggtaatgacgaagaatttatttgtttc
aattgcataaaattcactttctgctcttacaatataacccctcatatcat
ctcatcatttcccttccccctccgcccttttcctttccctccctaccgtt
ccctccctcccttccccacgcacacagGCCTGCATGTCTTCTTCGGCTGT
TACTACAACCTGTTTGGTATCATGAAGCGGCTGGGTATTTTCGAGTCCTC
CCTCCGGCTCAAGGACCACACCCACTCCTTCATCAATAAGGGCGGGCGTG
TGGGTGAGCTCGACTTCCGCTTTGGCGGCATCGGTGCTCCTATCAATGGT
CTCAAGGCCTTTGCCACCACAACGCAATTGGAAATCGGCGACAAAATTGC
GAACGCTGTGGCGCTGGCTACGAGTCCTGTAGTGAAGGCGCTGTTTAATT
TTGACGCGGCCATGGAGGATGTTCGGGCGTTAGACGGCATTTCCTTCTCC
GAGTGGTTCTTGAGGAAGGGCGGGAGCAGGGGGAGCATGACGAGAATGTG
GGACCCGATCGCGTATGCTTTGGGGTTCATCGACTGTGACAACATCTCGG
CCAGGTGCATGCTTACGATTTTCCAGCTCTTCGCCGTCAGGTCCGAGGCC
TCGGTCTTGCGCATGTGTGAGGGTTCCCCTAACACCTACCTCCATGAACC
TATCCTGGATTACCTCAAGGCACGAGGCGTGAAGTTACACTTGAATTCTC
GTATTCAAGACTTGGTTTATGACACGGACGCGGGTTCGGGGAAGCCGACG
CGGGTCAAGGGGTTTACCCTGTCGGGGAAGGCCAATACGGAGGACGGGAA
GGAGGCGGGCGCCGCGGGAGGGGTGGGGGTTGCGGGGGAGGAGAGGCTGT
TTGATTGTGTGGTGGCGGCCTGTGATGTTCCCGGTATTCAAAAGCTGCTG
CCGGAGAGCTTTAGGAAGATTCAAGAGTTCGATAACATTTACAAACTGAC
TGCGGTGCCGGTGACCACGgtaagagagtgagggttttgagtgttgaggt
gtgcaatcatggctaaggacattatatgtgggtttttcctcaccatcgct
tccttcctctctccccagGTGCAACTCCGGTTTAACGGCTGGGTCACGGA
ACTCCAGGACATGGAGAAGATGAAGGAAGTCTCGGGGGACAAGTCCAATG
GCAAGGCCCCGGGTATTGATAATCTTCTCTATAGTGCCGATGCCGAGTTC
TCGTGTTTCGCCGACCTGGCCTTGACGAGCCCTGCAGAGTACTACAAGGA
GGGAGAGGGCACGCTGCTGCAATGCGTCCTGACGCCGGGCGACAAGTGGA
TGCCTGTCTCGACCGAGAAAATTGCCGAGGCCACGTTGAAGCAAGTGCTT
GACCTCTTCCCGTCGGCACGCGGGTTGGAGTGCACGTGGACGAACGTGGT
AAAGCTGGGCCAGAGTCTGTATAGGGAAGCACCGGGGATGGACGTATACC
GGCCGAAGCAGAAGAGTCCCGTGGAAAACTTTTATTTGGCGGGCTCGTAC
ACCTACCAGGACTACATCGATTCCATGGAGGGTGCAACGAAGAGCGGATT
GTTGTGTGCAGATGTCATTTTGAGGGACGCGAAGGAGATCAAGGAGCGGG
CAGAATCTCAGGGGGTAGGCGCGGGGAAACAGGCAGTGATGTCGGCTTAA
GGGAAGGGAGAGAGGAGGGAGGAAGAGGAGGAGGGAGGGTATTTACAGTA
GAAAGTGTCGTCGATTGTGAGTGTGTGGCATGGATGCGGGTGAGAGAGGT
GTGTTGGACGTGTTTACGCCCGTCACACATGCACTAGAGCGAGAGGAGAG
AAAAGGGTAGAAAATTTAAAACTGGGAAAGAAAAGAAACAAGAAGAAGAA
GAAGCAGAAAC
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protein sequence of NO03G05250.1

>NO03G05250.1-protein ID=NO03G05250.1-protein|Name=NO03G05250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=631bp
MTSPIKTSRRGTTAAAMATLLFASSCTTSAFLLPATSPVSAPSSRLPTAG
FRQRATTVMSSVITQPVEAIRGSDKEKLLDLSVLDRAMSGPPANLRVKNK
NTEQLRVGIIGGGLGGLITAMDLAEAGHQVEIFEARRFAGGKVGSWVDKD
GNHIEMGLHVFFGCYYNLFGIMKRLGIFESSLRLKDHTHSFINKGGRVGE
LDFRFGGIGAPINGLKAFATTTQLEIGDKIANAVALATSPVVKALFNFDA
AMEDVRALDGISFSEWFLRKGGSRGSMTRMWDPIAYALGFIDCDNISARC
MLTIFQLFAVRSEASVLRMCEGSPNTYLHEPILDYLKARGVKLHLNSRIQ
DLVYDTDAGSGKPTRVKGFTLSGKANTEDGKEAGAAGGVGVAGEERLFDC
VVAACDVPGIQKLLPESFRKIQEFDNIYKLTAVPVTTVQLRFNGWVTELQ
DMEKMKEVSGDKSNGKAPGIDNLLYSADAEFSCFADLALTSPAEYYKEGE
GTLLQCVLTPGDKWMPVSTEKIAEATLKQVLDLFPSARGLECTWTNVVKL
GQSLYREAPGMDVYRPKQKSPVENFYLAGSYTYQDYIDSMEGATKSGLLC
ADVILRDAKEIKERAESQGVGAGKQAVMSA*
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Synonyms
Publications