NO03G05160, NO03G05160 (gene) Nannochloropsis oceanica

Overview
NameNO03G05160
Unique NameNO03G05160
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2993
Alignment locationchr3:1463967..1466959 -

Link to JBrowse

Properties
Property NameValue
DescriptionSmr domain-containing
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1463967..1466959 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR036063Smr_dom_sf
IPR002625Smr/MutS2_C
IPR013899DUF1771
IPR000571Znf_CCCH
Homology
BLAST of NO03G05160 vs. NCBI_GenBank
Match: EWM29956.1 (smr domain-containing [Nannochloropsis gaditana])

HSP 1 Score: 193.7 bits (491), Expect = 2.200e-45
Identity = 97/140 (69.29%), Postives = 117/140 (83.57%), Query Frame = 0
Query:  683 MKARHRAAALAIFASRNPSEKKIYEEGVLDLHGLHVAEATEAVEELLPDIYACGKAGEATLITGTGKHSGGVSHYQARLFPALEAYLRELEEEVKGGGKGRKGERESERGLFERVVDPQGYEGGFRVRLSRELMEYWGVG 823
            MK RHRAA +AIFA+RNPSE++IY+EG+LDLHGLHVAEATEAVEELLP I+A GK  E TLITGTGKHSGGVS +QARLFPA+EAYL++LE  V G G+GR+G  E  R L++ + DPQGY+ G +V LSR LME+WG+G
Sbjct:    1 MKERHRAAGMAIFAARNPSERRIYQEGILDLHGLHVAEATEAVEELLPGIFAGGKVTEVTLITGTGKHSGGVSQHQARLFPAMEAYLQDLEAMV-GEGRGRRGGSEGGR-LYKCITDPQGYQAGLKVCLSRPLMEHWGLG 138          
BLAST of NO03G05160 vs. NCBI_GenBank
Match: EWM29960.1 (ccch zinc finger and smr domain-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 185.3 bits (469), Expect = 7.800e-43
Identity = 168/486 (34.57%), Postives = 199/486 (40.95%), Query Frame = 0
Query:    5 PLQRWLARSLRSMGLDDAVFAPYIYALLNEAAEGEGGQDGNVEATLASLCPPQLDQQWNIFCQDLILYNAHPHLLPVSVAPSPSSSASSPIFNALSPAPPCLLRASSSISATSIGAVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGASDTGSLHSSPSLLPDYHSHIQPYVPQANYYQQHLRHQQLLQQQHGGFPLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYVRDAALGVLMGTFPHASPDALLVALLRCDVDLEEAVRRVDAALKPRVPACRYFVSGFCARADCAFSHALDTMTCIHWLLGSCRDGMMDEESKTLHRCPFWHDI 491
            P Q WL  SLR+MGLDD  FAPYI ALL EA+EG   ++G VE TLASLCPP+ + QW  FCQDL+LY+A PHLL  S   SP S ASSP  N LSP+P                    XXXXXXXXXX                                                                                                          G    GSL +SPS  P Y     PY+                          XXXXXXXXXXXXXXXXXX                                                                            +Y+ +  +  L+G+FPH +P+ALL ALLRCD+DLEEAV RV+ ALKP V  CRY+++GFCAR+DCAFSHA+ T TC+HWLLGSCRDGM+DEE++  H CPF HD+
Sbjct:   72 PFQLWLHDSLRTMGLDDGTFAPYIQALLMEASEGGVYENGGVEMTLASLCPPEQEPQWKSFCQDLLLYSAQPHLLSASAGHSPPSVASSPA-NTLSPSPE---SXXXXXXXXXXXXXXXXXXXXXXXXXPSLLSSSSRPFLPKRQQSQEHGQQPSSLVGSVTHDHAPGREEDDPFSLDTLSARVASSCLGEDEEEQEAVGPPTQFPDARLGPPDPLYPQPAEASRHMHVAPMGEHGRGHLGSLQASPSFHPYYSPMATPYL------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPEPHRQGSYPHHLHRHGSSEPAGGGGSARGVDDAYGLPDFGFLDEVDEGGAEEEGGREDLWEAQALEMAAVEEDESYIWEMGVNTLLGSFPHCAPEALLTALLRCDLDLEEAVARVEEALKPGVAPCRYYLAGFCARSDCAFSHAIATTTCVHWLLGSCRDGMLDEETQRPHTCPFRHDL 541          
BLAST of NO03G05160 vs. NCBI_GenBank
Match: XP_008607766.1 (hypothetical protein SDRG_03897 [Saprolegnia diclina VS20] >EQC38942.1 hypothetical protein SDRG_03897 [Saprolegnia diclina VS20])

HSP 1 Score: 123.2 bits (308), Expect = 3.600e-24
Identity = 117/422 (27.73%), Postives = 161/422 (38.15%), Query Frame = 0
Query:  396 LMGTFPHASPDALLVALLRCDVDLEEAVRRVDA-----ALKPRVPACRYFVSGFCARADCAFSHALDTMTCIHWLLGSCRDGMMDEESKTLHRCPFWHDIRAVDREDGNPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGKSFLQVALASKRTSIPGRNPFPXXXXXXXXXXXXXXXXXXXXXXXXRLESLWVMGGEEVRKTYQQARAEATHAAKARNQYFMRATEAFQRGDKAAAKSLGLEGRHWNAIMKARHRAAALAIFASRNPSEKKIYEEGVLDLHGLHVAEATEAVEELLPDIYACGKAGEATLITGTGKHSGGVSHYQARLFPALEAYLRELEEEVKGGGKGRKGERESERGLFERVVDPQGYEGGFRVRLS 813
            L+  FP   P+ LL  L   ++D+  A   + A     A K     CR+++ G C RADC F H    +TC +W+ G C  G  DE       C F H       E G                                                                         P  +F     AS  TS     P                           + + WV  G +V   Y+QAR  A   A ARNQ FM AT A+++G+K+ AK L  +G+ +NA MK  H  AA  IF +RNPS ++   +G+LDLHGLHVAEA E + +LLP +     A    ++TG+G HS     +  RL PA+E +L                   +E   F +V D +GY G  +V L+
Sbjct:  148 LLSVFPAMDPERLLDLLKEVELDVHRAQGVMQAIVDSEAQKQNAQVCRHYLQGECRRADCWFLHDTHLITCRYWIRGGCLQG--DE-------CAFAHSFEMAIVEYG-------------------ARQEQPQESDEEDDWIDMRDNLEPTNFPSLTSAKAPLASTDGLSLDFARALSMKPDAAF---PSASSSTSSSRHTPL------------------FTRSLSQPVATRWVDTGYQVSAQYKQARERARDLALARNQCFMNATHAYRQGNKSLAKDLSRQGQTYNAQMKDAHYEAASLIFEARNPSYER---DGLLDLHGLHVAEALELLSQLLPTV----TAETICIVTGSGHHS-----HHVRLKPAVERFL------------------AAEGYNFAQVPDRKGYVGMLQVSLA 490          
BLAST of NO03G05160 vs. NCBI_GenBank
Match: XP_012203526.1 (hypothetical protein SPRG_09015 [Saprolegnia parasitica CBS 223.65] >KDO25716.1 hypothetical protein SPRG_09015 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 122.5 bits (306), Expect = 6.200e-24
Identity = 117/422 (27.73%), Postives = 161/422 (38.15%), Query Frame = 0
Query:  396 LMGTFPHASPDALLVALLRCDVDLEEAVRRVDA-----ALKPRVPACRYFVSGFCARADCAFSHALDTMTCIHWLLGSCRDGMMDEESKTLHRCPFWHDIRAVDREDGNPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGKSFLQVALASKRTSIPGRNPFPXXXXXXXXXXXXXXXXXXXXXXXXRLESLWVMGGEEVRKTYQQARAEATHAAKARNQYFMRATEAFQRGDKAAAKSLGLEGRHWNAIMKARHRAAALAIFASRNPSEKKIYEEGVLDLHGLHVAEATEAVEELLPDIYACGKAGEATLITGTGKHSGGVSHYQARLFPALEAYLRELEEEVKGGGKGRKGERESERGLFERVVDPQGYEGGFRVRLS 813
            L+  FP   P+ LL  L   ++D+  A   + A     A K     CR+++ G C RADC F H    +TC +W+ G C  G  DE       C F H       E G                                                                         P  +F     AS  TS     P                           + + WV  G +V   Y+QAR  A   A ARNQ FM AT A+++G+K+ AK L  +G+ +NA MK  H  AA  IF +RNPS ++   +G+LDLHGLHVAEA E + +LLP +     A    ++TG+G HS     +  RL PA+E +L                   +E   F +V D +GY G  +V L+
Sbjct:  148 LLSVFPAMDPERLLDLLKEVELDVHRAQGVMQAIVDSEAQKQNAQVCRHYLQGECRRADCWFLHDTHLITCRYWIRGGCLQG--DE-------CAFAHSFEMAIVEYG-------------------ARQEQPQESDEEDDWIDTRDNLEPTNFPSLTSTKTPSASADGLSLDFARALSMKPDAAF---PSASSSTSSSRHTPL------------------FTRSLSQPVAARWVDTGYQVSAQYKQARERARDLALARNQCFMNATHAYRQGNKSLAKDLSRQGQMYNAQMKDAHYEAASLIFEARNPSYER---DGLLDLHGLHVAEALELLAQLLPAV----TAETICIVTGSGHHS-----HHVRLKPAVERFL------------------AAEGYNFAQVPDRKGYVGMLQVSLA 490          
BLAST of NO03G05160 vs. NCBI_GenBank
Match: OQS00801.1 (hypothetical protein ACHHYP_02591 [Achlya hypogyna])

HSP 1 Score: 122.1 bits (305), Expect = 8.100e-24
Identity = 104/379 (27.44%), Postives = 144/379 (37.99%), Query Frame = 0
Query:  396 LMGTFPHASPDALLVALLRCDVDLEEAVRRVDA-----ALKPRVPACRYFVSGFCARADCAFSHALDTMTCIHWLLGSCRDGMMDEESKTLHRCPFWHDIRAVDREDGNPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGKSFLQVALASKRTSIPGRNPFPXXXXXXXXXXXXXXXXXXXXXXXXRLESLWVMGGEEVRKTYQQARAEATHAAKARNQYFMRATEAFQRGDKAAAKSLGLEGRHWNAIMKARHRAAALAIFASRNPSEKKIYEEGVLDLHGLHVAEATEAVEELLPDIYACGKAGEATLITGTGKHSGGVSHYQARLFPALEAYL 770
            L+  +P   P+ LL  L   ++D+  A   + A     A K     CR+++ G C RADC F H    +TC +W+ G C  G           C F H       E G                                                                         P  SF     AS   +       P                         + + WV  G EV   Y+Q+R +A H A ARNQ FM AT A+++G+K+ AK L  +G+ +NA MK  H AAA  IF +RNP+ ++   +G LDLHGLHVAEA E + +LLP            ++TG+G HS     +  RL PA+E +L
Sbjct:  155 LLSIYPAMDPERLLDLLKAVELDVHRARVVMQAIVESEAQKQNAQVCRHYLQGECRRADCWFLHDTHLITCRYWIRGGCLQG---------EECAFAHSFDVAIAEHG----------------ACQEQPEESDDDDDWVGDQLEATNFPSLTKTPVAPTSDAALSLDFARALSMKPDAVFPAASFTSGRSASHTPAYSRSLSAP-------------------------VTARWVDTGYEVSSQYKQSREQARHLALARNQCFMNATHAYRQGNKSLAKELSRQGQQYNAQMKDAHYAAASVIFEARNPNWQR---DGFLDLHGLHVAEALELLAQLLP----TATTDTVCVVTGSGHHS-----HHVRLKPAVERFL 471          
BLAST of NO03G05160 vs. NCBI_GenBank
Match: CCA26658.1 (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 120.6 bits (301), Expect = 2.400e-23
Identity = 118/432 (27.31%), Postives = 166/432 (38.43%), Query Frame = 0
Query:  400 FPHASPDAL--LVALLRCDVDLEEAVRRVDAALKPRVPA--CRYFVSGFCARADCAFSHALDTMTCIHWLLGSC---RDGMMDEESKTLHRCPFWHDI-RAVDREDGNPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGKSFLQVALASKRTSIPGR------------NPFPXXXXXXXXXXXXXXXXXXXXXXXXRLESLWVMGGEEVRKTYQQARAEATHAAKARNQYFMRATEAFQRGDKAAAKSLGLEGRHWNAIMKARHRAAALAIFASRNPSEKKIYEEGVLDLHGLHVAEATEAVEELLPDIYACGKAGEATLITGTGKHSGGVSHYQARLFPALEAYLRELEEEVKGGGKGRKGERESERGLFERVVDPQGYEGGFRVRL 812
            FP  + + +  L+ L+  ++D   AV +     +    A  CR+++ G C R+DC F H+ + +TC  WL G C   +D +   +   LHR     D  R  + ED                                                                          PG+S L +   +K+T    R             P P                        +++  WV  G+ V   Y Q R EA   A ARN+ FMRATEA++ G+K  A S+  EGR  N  MK  H  AA  IF SRNP E ++Y + ++DLHGLHV EA E +   LP +   G      ++TGTG HS G  +  ARL PA+E +LR                  +E    E V D +GY G  +V L
Sbjct:  184 FPEVNANRMSELLRLVGMNMDRAHAVLKSTFTKEAEGSAQVCRHYLQGRCHRSDCMFLHSTNDVTCRFWLRGLCLQDKDCVFAHDFVELHRLELHRDTHRDYESEDEETE----------------------------------------------------QNELELSKDAFPSLGSIPPGESNLPIRQQNKQTLDYARAVSLYPYQFVHSQPRPGTMTFTSSSAGTRPIRTLKPVRMNKVK--WVTTGKSVTSQYHQVREEAYQLACARNKCFMRATEAYRSGNKVIATSMSREGRLHNEKMKKLHLMAAEVIFKSRNPQE-QVYRDRLMDLHGLHVVEAVEFLRSWLPQLAEDG-LDTVRIVTGTGHHSRGPQN-TARLLPAVEHFLR------------------TEGYESESVADRKGYVGMLQVNL 540          
BLAST of NO03G05160 vs. NCBI_GenBank
Match: XP_005853353.1 (hypothetical protein NGA_0684800 [Nannochloropsis gaditana CCMP526] >EKU23006.1 hypothetical protein NGA_0684800 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 118.6 bits (296), Expect = 9.000e-23
Identity = 61/99 (61.62%), Postives = 70/99 (70.71%), Query Frame = 0
Query:    5 PLQRWLARSLRSMGLDDAVFAPYIYALLNEAAEGEGGQDGNVEATLASLCPPQLDQQWNIFCQDLILYNAHPHLLPVSVAPSPSSSASSPIFNALSPAP 104
            P Q WL  SLR+MGLDD  FAPYI ALL EA+EG   ++G VE TLASLCPP+ + QW  FCQ L+LY+A PHLL  S   SP S ASSP  N LSP+P
Sbjct:    8 PFQLWLHDSLRTMGLDDGTFAPYIQALLMEASEGGVYENGGVEMTLASLCPPEQEPQWKSFCQGLLLYSAQPHLLSASAGHSPPSVASSPA-NTLSPSP 105          
BLAST of NO03G05160 vs. NCBI_GenBank
Match: XP_009834465.1 (hypothetical protein H257_09801 [Aphanomyces astaci] >ETV76340.1 hypothetical protein H257_09801 [Aphanomyces astaci])

HSP 1 Score: 117.5 bits (293), Expect = 2.000e-22
Identity = 114/382 (29.84%), Postives = 153/382 (40.05%), Query Frame = 0
Query:  396 LMGTFPHASPDALLVALLRCDVDLEEAVRR----VDAALKP--RVPACRYFVSGFCARADCAFSHALDTMTCIHWLLGSCRDGMMDEESKTLHRCPFWHDIRAVDREDGNPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGKSFLQVALASKRTSIPGRNPFPXXXXXXXXXXXXXXXXXXXXXXXXRLESLWVMGGEEVRKTYQQARAEATHAAKARNQYFMRATEAFQRGDKAAAKSLGLEGRHWNAIMKARHRAAALAIFASRNPSEKKIYE-EGVLDLHGLHVAEATEAVEELLPDIYACGKAGEA-TLITGTGKHSGGVSHYQARLFPALEAYL 770
            L+  FP   P+ LL  L   D+++  A       VD+ L        CR+++ G C RADC F H    + C +W+ G C  G  DE       C F H   AV     + S                                                                       G +        K++S+PG++                              + WV  G++V   YQ+ARA A   A ARNQ FM AT AF+  +KAAAKSL  +G+ +NA MK  H  AA  IF +RNP     YE +G++DLHGLHV EA E +  LLP I    K  EA  ++TG+G H    SH+Q RL PA+E +L
Sbjct:  161 LLLVFPVMDPERLLDLLKEVDLNVHRAQATMQGIVDSELSKGNNAQVCRHYLQGDCRRADCWFLHDTHLIPCRYWIRGGCLQG--DE-------CAFAHSF-AVAVSQYSSSVVADTDEHDDEEPLEWNFPALGGLTTTVSDDGLSLNFKRAVAMAPTSSSSYGGSNSWF-------------GSATSANLTHKKQSSVPGKSTMSI--------------------------TQWVETGDQVAVQYQRARATARDLALARNQCFMNATRAFRANNKAAAKSLSRQGQQFNAEMKQAHFEAATIIFNARNPQ----YEVDGIVDLHGLHVVEAVELLAWLLPSI----KTREAICVVTGSGHH----SHHQ-RLRPAVERFL 480          
BLAST of NO03G05160 vs. NCBI_GenBank
Match: XP_009526064.1 (hypothetical protein PHYSODRAFT_314545 [Phytophthora sojae] >EGZ17006.1 hypothetical protein PHYSODRAFT_314545 [Phytophthora sojae])

HSP 1 Score: 117.1 bits (292), Expect = 2.600e-22
Identity = 107/387 (27.65%), Postives = 143/387 (36.95%), Query Frame = 0
Query:  400 FPHASPDAL--LVALLRCDVDLEEAVRRVDAALKPRVP--ACRYFVSGFCARADCAFSHALDTMTCIHWLLGSCRDGMMDEESKTLHRCPFWHDI-------------RAVDREDGNPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGKSFLQVALASKRTSIPGRNPFPXXXXXXXXXXXXXXXXXXXXXXXXRLESLWVMGGEEVRKTYQQARAEATHAAKARNQYFMRATEAFQRGDKAAAKSLGLEGRHWNAIMKARHRAAALAIFASRNPSEKKIYEEGVLDLHGLHVAEATEAVEELLPDIYACGKAGEATLITGTGKHSGGVSHYQARLFPALEAYL 770
            FP   P  L  L+ L+  DVD   AV +     +   P   CR+++ G C RADC F H  D +TC  WL G+C              C F HD              R  D ED                                                                          PG +   +   S       R P P                         + + WV  G+ V   Y + R +A   A ARN+ FM AT+A++ G+KA AK L  +G  +N  MK  H  AA  IF SRNP   ++Y + ++DLHGLHVAEA E + ++LP + A        L+TG+G HS G     ARL PA+E +L
Sbjct:  211 FPDIDPSRLCDLLRLVGLDVDKAHAVLKATIERESIGPGQVCRHYLQGECRRADCMFLHDTDKITCRFWLRGTCLQA---------EHCVFAHDFCEYYSMDDNALGQRDYDSEDEMEQNGAPLDIQAEDMFPSLQSATSGATAPASPPLPQGSDGPSLAAATTTYPSTEDAVANLTMNFARAVALQPTPGATTRPLGNGSYGLDSTRRMPPPAPVHRPLYHKAGSSEG---------IGTKWVSTGQSVATQYLELREQAYEMACARNKCFMGATQAYRNGNKALAKGLSKQGHEYNVKMKNFHFLAASEIFESRNP-PNQLYMDRMMDLHGLHVAEAVEFLTQMLPKL-ADESVDSIYLVTGSGHHSKGPDG-NARLLPAVERFL 576          
BLAST of NO03G05160 vs. NCBI_GenBank
Match: XP_024575763.1 (hypothetical protein F443_09528 [Plasmopara halstedii] >CEG39394.1 hypothetical protein F443_09528 [Plasmopara halstedii])

HSP 1 Score: 115.9 bits (289), Expect = 5.800e-22
Identity = 106/376 (28.19%), Postives = 146/376 (38.83%), Query Frame = 0
Query:  400 FPHASPDAL--LVALLRCDVDLEEAVRRVDAALKPRVP--ACRYFVSGFCARADCAFSHALDTMTCIHWLLGSCRDGMMDEESKTLHRCPFWHDIRAVDREDGNPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGKSFLQ-VALASKRTSIPGR-NPFPXXXXXXXXXXXXXXXXXXXXXXXXRLESLWVMGGEEVRKTYQQARAEATHAAKARNQYFMRATEAFQRGDKAAAKSLGLEGRHWNAIMKARHRAAALAIFASRNPSEKKIYEEGVLDLHGLHVAEATEAVEELLPDIYACGKAGEATLITGTGKHSGGVSHYQARLFPALEAYL 770
            FP   P+ L  L+ L+  DVD   AV +     +   P   CR+++ G C RADC F H  D +TC  WL G+C              C F HD       DG+                                                                           +F + VAL    T   GR +                           + +  WV  GE V   Y + R +A   A ARN+ FM AT+A++ G+KA AK L  +G  +N  MK  H  AA  IF SRNP   ++Y + ++DLHGLHVAE  E + ++LP +   G      L+TG+G HS G S+  ARL PA++ +L
Sbjct:  177 FPDIDPNRLCDLLRLVGLDVDKAHAVMKATIERESIGPGQVCRHYLQGECRRADCMFLHDTDKITCRFWLRGTCLQA---------EHCVFAHDFCEYYSMDGDALGQRDYDSEDEMDQNSELLDIQAEEMFPALQSVTSATSTSVPLLRQGNDCLSLTKTNSYPSTENVVANLT---MNFARAVALQPAPTKFSGRLHDGGSDMQSSRRVPQSPPIYRSLYHKAGKNDVKWVTTGESVSSQYLELREQAHEMACARNKCFMGATQAYRNGNKALAKDLSRQGHEYNVKMKNFHFLAASEIFESRNP-PNQLYMDRMMDLHGLHVAETVELLTQMLPKLADEG-VDSIHLVTGSGHHSKG-SNGNARLLPAVKQFL 537          
The following BLAST results are available for this feature:
BLAST of NO03G05160 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29956.12.200e-4569.29smr domain-containing [Nannochloropsis gaditana][more]
EWM29960.17.800e-4334.57ccch zinc finger and smr domain-containing protein... [more]
XP_008607766.13.600e-2427.73hypothetical protein SDRG_03897 [Saprolegnia dicli... [more]
XP_012203526.16.200e-2427.73hypothetical protein SPRG_09015 [Saprolegnia paras... [more]
OQS00801.18.100e-2427.44hypothetical protein ACHHYP_02591 [Achlya hypogyna... [more]
CCA26658.12.400e-2327.31conserved hypothetical protein [Albugo laibachii N... [more]
XP_005853353.19.000e-2361.62hypothetical protein NGA_0684800 [Nannochloropsis ... [more]
XP_009834465.12.000e-2229.84hypothetical protein H257_09801 [Aphanomyces astac... [more]
XP_009526064.12.600e-2227.65hypothetical protein PHYSODRAFT_314545 [Phytophtho... [more]
XP_024575763.15.800e-2228.19hypothetical protein F443_09528 [Plasmopara halste... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005362NSK005362Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05160.1NO03G05160.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|622257gene_1725Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100567g4gene686Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05160.1NO03G05160.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05160 ID=NO03G05160|Name=NO03G05160|organism=Nannochloropsis oceanica|type=gene|length=2993bp
ACACAAGCTTACATACTTGGACAGGTTTTCCAGGAACTGTTGCTGTGACT
AGAACTGGCTGCGTTTGCGAGAGGCGGTGGTTTGCATGGATCCGCCCCCA
TTGCAACGCTGGCTTGCCAGAAGCCTTCGTTCTATGGGGCTAGATGACGC
TGTCTTTGCCCCTTACATTTACGCGCTGCTTAACGAGGCGGCCGAGGGGG
AAGGAGGGCAAGACGGCAATGTGGAGGCAACCTTGGCTTCCCTCTGCCCT
CCACAGCTAGATCAGCAGgttagttgaaaacaagtgaataagcccgccgg
gctcaccccttgtctcctccgtttcccgaccatgtacactttatcacttg
cacttcggcaatacttttccccacgattcatcccccaaccacgcgtacat
acacagTGGAACATCTTTTGCCAGGACTTAATACTGTACAATGCCCACCC
GCATCTCCTTCCCGTGTCCGTTGCCCCATCGCCCTCTTCCTCTGCCTCCT
CCCCCATCTTCAATGCGCTCTCCCCTGCCCCACCCTGTCTACTGCGAGCC
TCCTCCTCCATCTCAGCCACATCCATTGGCGCGGTGTCTTCTCCTTCTTC
CTCCATCTCACCCACTGCCTCCCCTTCTCTCCTGTCGTCCTCATCGCGAG
TTTTTGTGCCGAAACATCACCAGCAGGAGCCACCCCCCCATTACCATCTC
CCTAGGCTGGACGACGACGATCCCTTCTCTCTTGACAACCTCTCGGCGCA
AGTTGCCTCATCTTGCCTAGGGGACGATGGCGACGACGACGGTGGGGACG
ACGAGGTGGGACCGGGGCATCATCGCCATTCGGGAAGGATCCTAGTTTTG
GAGCAGCAACAGCAGCAGCAGCGGCACCACTACAACGGCGCCGCCCATAT
CCACCATCACCCCAACCACCACCTAGCAGCAGCAGTGACAGGAGCATCCG
ACACCGGCTCATTGCATTCCTCCCCCTCGCTGCTCCCGGATTACCACTCC
CACATTCAACCTTATGTACCTCAAGCCAACTACTACCAACAGCACCTCCG
ACACCAGCAGCTACTACAGCAACAGCACGGCGGCTTCCCTCTACCACACC
TGCAATTGCAGCGAAGCGGGAGCGGGAGCGGTGGTGGGGCTGTGGCAGGT
GGTGGTGGTGCTGGCGGGGGGTCGGGATTGCATTCATCGGCGTTGTCATC
GGGGGGAGGAAACCATTTTGATACCGACGACCTGGAGGAGGATGATGGGT
ATGGCTATGGAGGCGGGAATTTCCAATTTTTGGATGAGGAGGAGGACGAG
GGAGAGGATGAAGATGAGAGGGAAGGGGGGATGTCGAGGGCGATGATGAT
GGCGATGGTAGCGGCGGAGGAGGAGGAGGCGTATGTGCGTGATGCTGCCC
TAGGAGTGCTGATGGGCACCTTTCCACACGCGTCGCCCGATGCCCTTCTC
GTCGCTCTCTTGCGTTGCGACGTCGATTTGGAAGAAGCAGTGCGGAGGGT
GGACGCGGCATTAAAACCCCGGGTGCCCGCATGCCGTTACTTTGTGTCTG
GCTTTTGTGCCCGGGCCGACTGTGCCTTCAGCCATGCCCTGGATACGATG
ACGTGCATTCACTGGTTACTTGGGTCCTGTCGGGACGGGATGATGGACGA
GGAAAGCAAGACGCTGCACAGGTGCCCTTTCTGGCATGACATCCGTGCCG
TGGACCGGGAGGACGGTAATCCTTCCGAGACCTCTTCCTCCTCCTCGTCC
TCCTCCTCCACCTCCTCCTCCTCTTCTTCCGGCCCACTCTTCAGTGCCAA
GGACGAAACACACTTTCCTGCCCTTTCAGCCTCGACAACCAGCAGCTCCG
CCACGACGTCTGCGGCGTCCTCGTCCTCGTCCTCGTCCTCGTCCTCGTCC
TCGTCCTCGTCCTCGCCCTCCACCACGGCCAGCACTCCGGGCAAGTCTTT
CCTACAAGTCGCCCTGGCCTCGAAACGCACCTCCATCCCTGGGAGAAACC
CTTTCCCTTCCTCCCTCCCTTCCTCTTCTTCCTCCAAGAACAGCTGCAGG
AGCAGGAGCAGGAGTAGGAGCAGCAGAAGGAGGTTGGAATCTCTGTGGGT
CATGGGGGGGGAGGAGGTGAGAAAGACATACCAGCAGGCGCGAGCGGAGG
CGACCCACGCAGCAAAGGCTCGGAACCAATACTTCATGCGGGCCACTGAG
GCCTTCCAGAGGGGGGATAAGGCGGCGGgtacgtaatgagcgaaggaggg
agggagggagggaaaggaagatatctcgaggtgcccagaaagtatcacta
ttcacccctcccccttacctctccctccttccctctttggccccctttct
gttgccttcagcaaagctgcttccattataggtcaccataaatcctcatc
tccctccctccctccctccctcccctcctccagCCAAATCCCTGGGGCTG
GAAGGCCGGCATTGGAACGCCATCATGAAGGCCCGCCACCGTGCTGCTGC
CCTCGCCATCTTTGCCTCGCGGAATCCGTCCGAGAAAAAGATTTATGAGG
AGGGTGTACTAGACCTGCACGGGCTGCATGTGGCAGAGGCGACCGAGGCA
GTGGAGGAGTTGCTGCCAGACATTTACGCGTGTGGGAAGGCTGGGGAGGC
GACATTGATCACGGGGACAGGAAAACACTCGGGAGGGGTGAGTCATTACC
AAGCAAGGCTCTTCCCTGCGCTGGAGGCTTATTTACGAGAGCTGGAGGAG
GAGGTGAAGGGGGGTGGGAAGGGGAGGAAGGGGGAGAGGGAGAGCGAGAG
GGGGTTGTTCGAGAGGGTTGTGGACCCCCAAGGGTACGAAGGGGGCTTTA
GGGTGCGGCTGTCGAGGGAGTTGATGGAGTATTGGGGTGTGGGGAGCTAG
CAGGAGGAGGGACAGGGGGGGCGCTAGAGGCAAGGACAAAGCGGAGGGAG
ACGAGGAGGACGATAAGAAAAAACATGACTGATGATTCTGACA
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protein sequence of NO03G05160.1

>NO03G05160.1-protein ID=NO03G05160.1-protein|Name=NO03G05160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=824bp
MDPPPLQRWLARSLRSMGLDDAVFAPYIYALLNEAAEGEGGQDGNVEATL
ASLCPPQLDQQWNIFCQDLILYNAHPHLLPVSVAPSPSSSASSPIFNALS
PAPPCLLRASSSISATSIGAVSSPSSSISPTASPSLLSSSSRVFVPKHHQ
QEPPPHYHLPRLDDDDPFSLDNLSAQVASSCLGDDGDDDGGDDEVGPGHH
RHSGRILVLEQQQQQQRHHYNGAAHIHHHPNHHLAAAVTGASDTGSLHSS
PSLLPDYHSHIQPYVPQANYYQQHLRHQQLLQQQHGGFPLPHLQLQRSGS
GSGGGAVAGGGGAGGGSGLHSSALSSGGGNHFDTDDLEEDDGYGYGGGNF
QFLDEEEDEGEDEDEREGGMSRAMMMAMVAAEEEEAYVRDAALGVLMGTF
PHASPDALLVALLRCDVDLEEAVRRVDAALKPRVPACRYFVSGFCARADC
AFSHALDTMTCIHWLLGSCRDGMMDEESKTLHRCPFWHDIRAVDREDGNP
SETSSSSSSSSSTSSSSSSGPLFSAKDETHFPALSASTTSSSATTSAASS
SSSSSSSSSSSSSSPSTTASTPGKSFLQVALASKRTSIPGRNPFPSSLPS
SSSSKNSCRSRSRSRSSRRRLESLWVMGGEEVRKTYQQARAEATHAAKAR
NQYFMRATEAFQRGDKAAAKSLGLEGRHWNAIMKARHRAAALAIFASRNP
SEKKIYEEGVLDLHGLHVAEATEAVEELLPDIYACGKAGEATLITGTGKH
SGGVSHYQARLFPALEAYLRELEEEVKGGGKGRKGERESERGLFERVVDP
QGYEGGFRVRLSRELMEYWGVGS*
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Synonyms
Publications