NO03G05110, NO03G05110 (gene) Nannochloropsis oceanica

Overview
NameNO03G05110
Unique NameNO03G05110
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1173
Alignment locationchr3:1443755..1444927 +

Link to JBrowse

Properties
Property NameValue
Description4-diphosphocytidyl-2c-methyl-d-erythritol kinase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1443755..1444927 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016114terpenoid biosynthetic process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:00505154-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity
GO:0005524ATP binding
GO:0016301kinase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR020568Ribosomal_S5_D2-typ_fold
IPR036554GHMP_kinase_C_sf
IPR004424IspE
IPR006204GHMP_kinase_N_dom
IPR013750GHMP_kinase_C_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO03G05110 vs. NCBI_GenBank
Match: EWM29944.1 (4-diphosphocytidyl-2c-methyl-d-erythritol kinase [Nannochloropsis gaditana])

HSP 1 Score: 522.3 bits (1344), Expect = 1.300e-144
Identity = 273/374 (72.99%), Postives = 307/374 (82.09%), Query Frame = 0
Query:   23 LLLPDPTTAFAPPLNGNGLGHATSPSSFAPRTAMSLPSSTRARLFVVAGTPSSSLESRRKEGNFDLELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTDKSNLVLRALDLFRRKTGKTRHFQVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGCPASDEDLIEWSKELGSDITFFLSQGTAYCTGRGEILEPVPALSPSTHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKGEPVPPSLYVNDLEPPAFQCIPGLKTIKESLLSKGFAAVMMSGSGTSIFAM--APPSLPA----SFDAAAFAQEMDVDVWATTFTGRPENDPRAWYPNPHA 391
            LLLP P   F P +  +G  H          TA  L SS+  R        +S+LE RR+EGNFDLELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLL K LPA A QDEF+SS+TSLVTD+SNLVLRALDLFR KTGKT+ F+VYLEKRTPVQAGLGGGSSNAATTLFAANQLLG PA+DE+LIEWSKELGSDITFFLS+GTAYCTGRGE+LEPVP L  S  LY+VKPP+GLSTPAVFKALDL+AL+ EDPR LL+AFT  L +GE  P S+Y+NDLEPPAFQC+P LK IKE+LL++GF  VMMSGSGT+IFAM  AP SLP+    SFDAAAFA+EM+VD+WATTFT RP +DP+AWYPNPHA
Sbjct:   25 LLLPAPIFCFVPSIL-SGFRH----------TAADLSSSSPVRRLSTVLHATSTLEVRRREGNFDLELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLLLKVLPAIAVQDEFSSSYTSLVTDQSNLVLRALDLFREKTGKTQRFEVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGTPATDEELIEWSKELGSDITFFLSKGTAYCTGRGELLEPVPPLPSSIKLYVVKPPVGLSTPAVFKALDLDALNGEDPRDLLAAFTQHLSRGELGPASMYINDLEPPAFQCVPRLKAIKEALLARGFDCVMMSGSGTAIFAMAPAPSSLPSSAGLSFDAAAFAREMEVDIWATTFTNRPSDDPKAWYPNPHA 387          
BLAST of NO03G05110 vs. NCBI_GenBank
Match: XP_005853675.1 (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Nannochloropsis gaditana CCMP526] >EKU22689.1 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 478.4 bits (1230), Expect = 2.100e-131
Identity = 239/301 (79.40%), Postives = 268/301 (89.04%), Query Frame = 0
Query:   96 VNLFLRIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTDKSNLVLRALDLFRRKTGKTRHFQVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGCPASDEDLIEWSKELGSDITFFLSQGTAYCTGRGEILEPVPALSPSTHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKGEPVPPSLYVNDLEPPAFQCIPGLKTIKESLLSKGFAAVMMSGSGTSIFAM--APPSLPA----SFDAAAFAQEMDVDVWATTFTGRPENDPRAWYPNPHA 391
            +NLFLRIIRRREDGYHELASLFQTVAFGDTLL K LPA A QDEF+SS+TSLVTD+SNLVLRALDLFR KTGKT+ F+VYLEKRTPVQAGLGGGSSNAATTLFAANQLLG PA+DE+LIEWSKELGSDITFFLS+GTAYCTGRGE+LEPVP L  S  LY+VKPP+GLSTPAVFKALDL+AL+ EDPR LL+AFT  L +GE  P S+Y+NDLEPPAFQC+P LK IKE+LL++GF  VMMSGSGT+IFAM  AP SLP+    SFDAAAFA+EM+VD+WATTFT RP +DP+AWYPNPHA
Sbjct:  104 MNLFLRIIRRREDGYHELASLFQTVAFGDTLLLKVLPAIAVQDEFSSSYTSLVTDQSNLVLRALDLFREKTGKTQRFEVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGTPATDEELIEWSKELGSDITFFLSKGTAYCTGRGELLEPVPPLPSSIKLYVVKPPVGLSTPAVFKALDLDALNGEDPRDLLAAFTQHLSRGELGPASMYINDLEPPAFQCVPRLKAIKEALLARGFDCVMMSGSGTAIFAMAPAPSSLPSSAGLSFDAAAFAREMEVDIWATTFTNRPSDDPKAWYPNPHA 404          
BLAST of NO03G05110 vs. NCBI_GenBank
Match: OEU20452.1 (4--2-C-methyl-D-erythritol kinase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 306.2 bits (783), Expect = 1.400e-79
Identity = 175/321 (54.52%), Postives = 215/321 (66.98%), Query Frame = 0
Query:   72 TPSSSLESRRKE-GNFDLELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTDKSNLVLRALDLFRRKTGKTRHFQVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGCPASDEDLIEWSKELGSDITFFLSQGTAYCTGRGEILEPV-PALSPSTHLYIVKPPIGLSTPAVFKALDLNALSKED-PRALLSAFTTRLGKGEPVPPSLYVNDLEPPAFQCIPGLKTIKESLLS-KGFAAVMMSGSGTSIFAMAPPSLPASFDAAAFAQEMDVDVWATTFTGRPENDPRAWYPNP 389
            TP+S++ES ++E     L LFSP K+NLFLRIIR+REDG+H+LASLFQ + FGDTL    L    + DEF  +   +  D SNLV+RAL+L R +TG   HF+  L K+ P QAGLGGGS+NAAT ++ AN+L+G PAS E +IEWS ELGSDITFFLSQGTAYCTGRGE+L P+ P LS  T + IVKP +GLSTP+VFKALD + LS  D    LL AF    G  E V    YVNDLE PAF+C+P L  +KESLL   GF  VMMSGSGTSIF +  P    SF    F +  DV V+ + F  R  ++   W+  P
Sbjct:   69 TPTSTVESTQQEHEQKTLVLFSPCKINLFLRIIRKREDGFHDLASLFQAIGFGDTLELAPLREEKSTDEFTCNMPGVPVDSSNLVIRALELMRERTGVDMHFKTNLIKQCPAQAGLGGGSANAATAMWGANELMGKPASLEQMIEWSAELGSDITFFLSQGTAYCTGRGEVLTPIDPPLSTGTKVCIVKPNVGLSTPSVFKALDYDELSDLDSDDVLLPAFVNSDGV-ENVSKEYYVNDLEAPAFRCVPKLGELKESLLKVAGFKHVMMSGSGTSIFCIGEPEDKESF-MKEFGESDDVQVFFSEFIDRESDE---WFQEP 384          
BLAST of NO03G05110 vs. NCBI_GenBank
Match: CBJ27522.1 (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplast precursor [Ectocarpus siliculosus])

HSP 1 Score: 304.7 bits (779), Expect = 4.200e-79
Identity = 168/311 (54.02%), Postives = 210/311 (67.52%), Query Frame = 0
Query:   75 SSLESRRKEGNFDLELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTDKSNLVLRALDLFRRKTGKTRHFQVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGCPASDEDLIEWSKELGSDITFFLSQGTAYCTGRGEILEPVPALSPSTHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKGEPVPPSLYVNDLEPPAFQCIPGLKTIKESLLSKGFAAVMMSGSGTSIFAMAPPSLPASFDAAAFAQEMDVDVWATTFTGRPENDPRAWY 386
            SS +S    G +D   FSPAK+NLFLRI+ +R DG+H+LASLFQTV FGD L F+ LP SA  D F  +   + TD SNLVLRALDLFR++T   + ++VYL KR P +AGLGGGS+NAAT LFAAN+L G PAS EDL  WS ELGSDITFFLS GT YCTGRGE+L P   L P T +++VKP  GLSTP VF+ LD + LS+ +P  LL  F       E +  + YVNDLE PAF+ +P L+T+KE L + GF  V+MSGSG++IF +  P+  +S+    FA++    V  T F  RP  D  AWY
Sbjct:   73 SSPDSTTPVGEWDANFFSPAKINLFLRILGKRPDGFHDLASLFQTVGFGDKLFFRKLPESAVADTFNCNMEGVPTDGSNLVLRALDLFRKRTSSQQFYEVYLSKRIPPEAGLGGGSANAATALFAANKLAGHPASLEDLQLWSAELGSDITFFLSTGTCYCTGRGEVLHPQEPL-PQTRVWLVKPNKGLSTPVVFRHLDYDQLSRIEPAGLLKQFIE-----EGLAEADYVNDLELPAFKAMPSLQTMKEELQTLGFEHVLMSGSGSTIFCIGSPTHGSSW-TKEFAEKWGAMVVDTHFINRPVED-NAWY 375          
BLAST of NO03G05110 vs. NCBI_GenBank
Match: GAX15465.1 (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Fistulifera solaris])

HSP 1 Score: 294.7 bits (753), Expect = 4.300e-76
Identity = 168/323 (52.01%), Postives = 211/323 (65.33%), Query Frame = 0
Query:   70 AGTPSSSLESRRKEGNFDLELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTDKSNLVLRALDLFRRKTGKTRHFQVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGCPASDEDLIEWSKELGSDITFFLSQGTAYCTGRGEILEPV-PALSPSTHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKGEPVPPSLYVNDLEPPAFQCIPGLKTIKESLLS-KGFAAVMMSGSGTSIFAMAPPSLPASFDAAAFAQEMDVDVWATTFTGRPENDPRAWYPNPHA 391
            + T SS+L+S        L LFSP K+NLFLRIIR+R DGYH+LASLFQ + FGDTL    L   AT+DEF  +   +  D SNLVLRAL L R KT    +F+  L K+ P QAGLGGGS+NAAT L+ ANQL+G PA+ E+++EWS  LGSDITFFLS+GTAYCTGRGEI+  + P L   T + IVKP +GLSTP VFKAL+ + LS  D   +L    T L   E VP  +++NDLE PAF+C+P LK +KE LL  +GF  VMMSGSGTSIF +  P   A+FD   F    D+ ++ + F  R E     W+  P +
Sbjct:   40 SATTSSNLQS--------LTLFSPCKINLFLRIIRKRPDGYHDLASLFQAIGFGDTLELSILGDDATEDEFTCNMPGVPVDSSNLVLRALALMREKTQVATYFKANLIKQVPAQAGLGGGSANAATALWGANQLMGEPATLEEMVEWSGALGSDITFFLSRGTAYCTGRGEIMSSIDPPLPSGTPVCIVKPNVGLSTPQVFKALEYDKLSTMDADQML--LPTFLKGIERVPDEMFINDLEFPAFKCLPELKLLKEELLQVEGFDHVMMSGSGTSIFCLGAPKDKAAFD-NKFKSREDLQIFYSEFISRSEGQ---WFEAPRS 348          
BLAST of NO03G05110 vs. NCBI_GenBank
Match: EJK49855.1 (hypothetical protein THAOC_31222 [Thalassiosira oceanica])

HSP 1 Score: 294.3 bits (752), Expect = 5.700e-76
Identity = 171/317 (53.94%), Postives = 204/317 (64.35%), Query Frame = 0
Query:   76 SLESRRKEGNFDLELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTDKSNLVLRALDLFRRKTGKTR-HFQVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGCPASDEDLIEWSKELGSDITFFLSQGTAYCTGRGEILEPV-PALSPSTHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKG-EPVPPSLYVNDLEPPAFQCIPGLKTIKESLLS-KGFAAVMMSGSGTSIFAMAPPSLPASFDAAAFAQEMDVDVWATTFTGRPENDPRAWYPNP 389
            +L++  +     L LFSP K+NLFLRIIR+REDG+H+LASLFQ V FGDTL       S   D+F+ +   + TD SNLVLRAL L R KTGKT  +F   L KR P QAGLGGGS+NAAT ++ AN+L+G PA+ + LIEWS ELGSDITFFLS+GTAYCTGRGEI+ P+ P L     L IVKP +GLSTP VFKALD + LS EDP+ L   F   L  G        Y+NDLE PAF C+P LK +KE LL  KGF  VMMSGSGTSIF +  P    SF    F     V V+   F  R E    +W+  P
Sbjct:   35 TLDASSESAAESLSLFSPCKINLFLRIIRKREDGFHDLASLFQAVGFGDTLNLSL--TSGDDDKFSCNMQGVPTDSSNLVLRALQLMREKTGKTAVYFDADLVKRCPAQAGLGGGSANAATAMWGANELMGRPATLDQLIEWSGELGSDITFFLSRGTAYCTGRGEIMTPIDPPLPSGAKLSIVKPDLGLSTPMVFKALDYDQLSAEDPQLLCDTF---LNDGVVETDDKYYINDLEQPAFDCLPELKALKEELLQVKGFDHVMMSGSGTSIFCIGQPEDMESF-MNDFDSRTGVSVFNAEFINREEG---SWFEAP 342          
BLAST of NO03G05110 vs. NCBI_GenBank
Match: OLP85018.1 (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic [Symbiodinium microadriaticum])

HSP 1 Score: 293.5 bits (750), Expect = 9.700e-76
Identity = 164/304 (53.95%), Postives = 200/304 (65.79%), Query Frame = 0
Query:   88 LELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTDKSNLVLRALDLFRRKTGKTRHFQVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGCPASDEDLIEWSKE--LGSDITFFLSQGTAYCTGRGEILEPVPAL--SPSTHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKGEPVPPSLYVNDLEPPAFQCIPGLKTIKESLLSK-GFAAVMMSGSGTSIFAMAPPSLPASFDAAAFAQEMDVD-VWATTFTGRPENDPRAWY 386
            +ELFSPAKVNLFLRIIRRR DGYH+LASLF TVAFGD L+ +ALP +A QD    +   +  D SNLV+RAL LFR K+G  R F V LEK  P QAG+GGGSSNAAT  F ANQL GCPA+ EDLI W  +  +GSD TFFLS+GTAYCTGRGEI+ P+  L       +Y+VKP  GLST  VF+A+DL+ALS  DP  LL  F     K +    S +VNDLE PAF+  P L+ +K+ L  +  F AV+MSGSG++IF +  P   A     A   + D++ +W T F  RP   P  WY
Sbjct:  367 VELFSPAKVNLFLRIIRRRPDGYHDLASLFHTVAFGDKLVLEALPDNAEQDRLECNLPGVPVDDSNLVIRALKLFREKSGIRRFFGVTLEKEIPAQAGMGGGSSNAATAFFGANQLCGCPATPEDLISWGDDPVIGSDATFFLSEGTAYCTGRGEIVTPMDGLPIKDGLSVYLVKPNYGLSTGKVFQAMDLSALSTTDPEELLQTF-----KDKGTSHSSWVNDLEKPAFKVSPELRDLKKYLAEEWDFEAVLMSGSGSTIFCLGDPKGGAKAFEVATKNQFDIEGIWQTEFMRRP--SPTEWY 663          
BLAST of NO03G05110 vs. NCBI_GenBank
Match: GAX19012.1 (4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [Fistulifera solaris])

HSP 1 Score: 290.8 bits (743), Expect = 6.300e-75
Identity = 161/305 (52.79%), Postives = 202/305 (66.23%), Query Frame = 0
Query:   88 LELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTDKSNLVLRALDLFRRKTGKTRHFQVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGCPASDEDLIEWSKELGSDITFFLSQGTAYCTGRGEILEPV-PALSPSTHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKGEPVPPSLYVNDLEPPAFQCIPGLKTIKESLLS-KGFAAVMMSGSGTSIFAMAPPSLPASFDAAAFAQEMDVDVWATTFTGRPENDPRAWYPNPHA 391
            L LFSP K+NLFLRIIR+R DGYH+LASLFQ + FGDTL    L   AT+DEF  +   +  D SNLVLRAL L R KT    +F+  L K+ P QAGLGGGS+NAAT L+ ANQL+G PA+ E+++EWS  LGSDITFFLS+GTAYCTGRGE++  + P L   T + IVKP +GLSTP VFKAL+ + LS  D   +L    T L   E VP  +++NDLE PAF+C+P LK +KE LL  +GF  VMMSGSGTSIF +  P    +F+   F    D+ V+ + F  R E     W+  P +
Sbjct:   61 LTLFSPCKINLFLRIIRKRPDGYHDLASLFQAIGFGDTLELSVLGDDATEDEFTCNMPGVPVDSSNLVLRALALMREKTQVATYFKANLIKQVPAQAGLGGGSANAATALWGANQLMGEPATLEEMVEWSGALGSDITFFLSRGTAYCTGRGEVMSSIDPPLPSGTPVCIVKPNVGLSTPQVFKALEYDKLSTVDADQVL--LPTFLKGIEKVPDEMFINDLEFPAFKCLPELKKLKEELLQVEGFEHVMMSGSGTSIFCLGAPKDKVAFE-NKFKSREDLQVFYSEFISRSEGQ---WFEAPRS 359          
BLAST of NO03G05110 vs. NCBI_GenBank
Match: XP_002287649.1 (4-diphosphocytidyl-2c-methyl-d-erythritol kinase, partial [Thalassiosira pseudonana CCMP1335] >EED95092.1 4-diphosphocytidyl-2c-methyl-d-erythritol kinase, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 290.4 bits (742), Expect = 8.200e-75
Identity = 167/308 (54.22%), Postives = 203/308 (65.91%), Query Frame = 0
Query:   88 LELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTDKSNLVLRALDLFRRKTGKTR-HFQVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGCPASDEDLIEWSKELGSDITFFLSQGTAYCTGRGEILEPV-PALSPSTHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKGEPVPPSLYVNDLEPPAFQCIPGLKTIKESLLS-KGFAAVMMSGSGTSIFAMAPPSLPASFDAAAFAQEMD----VDVWATTFTGRPENDPRAWYPNP 389
            L+LFSP K+NLFLRIIR+R DG+H+LASLFQ V FGDTL      +    DEF  +   + TD SNLVLRAL+L R+KTGKT  +F+  L KR P QAGLGGGS+NAAT ++ AN+L+G PA+  +LIEWS ELGSDITFFLS+GTAYCTGRGE++ P+ P L   + L IVKP +GLSTP VF ALD   LS EDP  LL+ F    G  +      Y+NDLE PAF C+P LK +KE LL  KGF  VMMSGSGTSIF +         D  AF +E D    V V+   F  R +     W+ +P
Sbjct:    1 LKLFSPCKINLFLRIIRKRPDGFHDLASLFQAVGFGDTLTLSL--SEQPNDEFTCNMEGVPTDSSNLVLRALELMRQKTGKTDVYFKADLFKRVPAQAGLGGGSANAATAMWGANELMGKPATLGELIEWSGELGSDITFFLSRGTAYCTGRGEVMTPIDPPLPSGSKLSIVKPDLGLSTPKVFSALDYEQLSAEDPEELLNTF-LEFGVVD-TDDEYYINDLEQPAFDCLPELKALKEDLLKVKGFDHVMMSGSGTSIFCIGEAD-----DKDAFMKEFDSREGVSVFNAEFINREDG---CWFESP 296          
BLAST of NO03G05110 vs. NCBI_GenBank
Match: PRW60708.1 (Isocitrate lyase [Chlorella sorokiniana])

HSP 1 Score: 285.8 bits (730), Expect = 2.000e-73
Identity = 151/282 (53.55%), Postives = 196/282 (69.50%), Query Frame = 0
Query:   83 EGNFDLELFSPAKVNLFLRIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTDKSNLVLRALDLFRRKTGKTRHFQVYLEKRTPVQAGLGGGSSNAATTLFAANQLLGCPASDEDLIEWSKELGSDITFFLSQGTAYCTGRGEILEPV-PALSPSTHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKGEPVPPSLYVNDLEPPAFQCIPGLKTIKESLLS--KGFAAVMMSGSGTSIFAMAPPSLPASFDAAAFA 362
            EG  +L+LFSP+K+N+FLRI+RRREDGYH+LASLF  +  GD + F+ L  +AT D  + +   + TD SNLV++AL+LFRRKTG+ + F+V L+KR P  AGLGGGS NAATTL+AAN+L G PAS+E+L+EWS E+GSDI+ F SQG AYCTGRGEI+E V P L   T L +VKPP+GLSTP +FKALDL   S  DPR LL+   T     E     L VNDLE PAF  +P L  +KE L +  +G+ +V M+GSG++I  +    +PA      +A
Sbjct:   42 EGGSELKLFSPSKINVFLRIMRRREDGYHDLASLFHVIDLGDDMAFEELAGTATADALSCNMDGVPTDDSNLVIKALNLFRRKTGRKQRFKVDLQKRVPHGAGLGGGSGNAATTLWAANELCGRPASNEELLEWSGEIGSDISVFFSQGAAYCTGRGEIVEDVAPPLPLGTPLLLVKPPVGLSTPEIFKALDLGRRSTADPRDLLARLAT-----EGATQELTVNDLEQPAFDRLPALLALKEQLAAEGRGYTSVFMTGSGSTIVCIGSDDVPAFLQEPQYA 318          
The following BLAST results are available for this feature:
BLAST of NO03G05110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29944.11.300e-14472.994-diphosphocytidyl-2c-methyl-d-erythritol kinase [... [more]
XP_005853675.12.100e-13179.404-diphosphocytidyl-2-C-methyl-D-erythritol kinase ... [more]
OEU20452.11.400e-7954.524--2-C-methyl-D-erythritol kinase [Fragilariopsis ... [more]
CBJ27522.14.200e-7954.024-diphosphocytidyl-2-C-methyl-D-erythritol kinase,... [more]
GAX15465.14.300e-7652.014-diphosphocytidyl-2-C-methyl-D-erythritol kinase ... [more]
EJK49855.15.700e-7653.94hypothetical protein THAOC_31222 [Thalassiosira oc... [more]
OLP85018.19.700e-7653.954-diphosphocytidyl-2-C-methyl-D-erythritol kinase,... [more]
GAX19012.16.300e-7552.794-diphosphocytidyl-2-C-methyl-D-erythritol kinase ... [more]
XP_002287649.18.200e-7554.224-diphosphocytidyl-2c-methyl-d-erythritol kinase, ... [more]
PRW60708.12.000e-7353.55Isocitrate lyase [Chlorella sorokiniana][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL069nonsL069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR054ngnoR054Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005369NSK005369Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G05110.1NO03G05110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100247g7gene695Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G05110.1NO03G05110.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G05110 ID=NO03G05110|Name=NO03G05110|organism=Nannochloropsis oceanica|type=gene|length=1173bp
ATGGCACAGCAGCAGCGGCGTTGGCAACTACCACCGTCGGCCTGCCTCCT
CGTCGCATGTCTCGTCCTTCTCCTCCCCGATCCTACCACTGCTTTTGCTC
CGCCGCTAAACGGGAACGGGCTTGGACATGCCACCTCCCCCTCCTCCTTT
GCGCCCAGGACCGCCATGTCCCTCCCCTCCTCCACCAGGGCACGCCTCTT
TGTTGTGGCTGGCACTCCATCCTCCTCTCTCGAGTCAAGAAGAAAAGAAG
GCAACTTTGACCTCGAACTCTTTTCGCCCGCCAAGGTCAACCTCTTTCTC
CGCATCATCCGCCGTCGTGAAGACGGCTACCACGAGCTAGCCTCCCTCTT
CCAAACCGTCGCCTTTGGGGACACTTTACTCTTCAAAGCCCTCCCCGCCT
CGGCCACGCAAGATGAATTCGCCTCTTCGTTCACATCCCTCGTCACGGAC
AAGAGTAACTTGGTCTTGCGGGCGCTCGACCTCTTTCGTCGTAAGACAGG
CAAGACTCGCCACTTCCAAGTCTACCTCGAGAAACGCACCCCCGTCCAAG
CCGGTCTCGGTGGTGGGAGCAGCAATGCCGCCACAACGTTATTCGCAGCC
AACCAACTCCTCGGCTGCCCCGCCAGTGATGAAGACCTGATCGAGTGGTC
TAAGGAGCTAGGCTCCGACATAACATTTTTCCTCTCCCAGGGCACAGCAT
ATTGCACTGGTCGCGGCGAAATACTCGAACCCGTCCCCGCCCTATCCCCC
TCCACACACCTCTATATCGTCAAGCCGCCCATCGGTCTTTCTACCCCCGC
AGTTTTCAAAGCGCTTGATTTAAATGCCCTGAGTAAAGAAGATCCTCGGG
CCCTCCTCTCCGCTTTCACCACCCGCCTCGGTAAGGGCGAGCCTGTCCCT
CCCTCTCTATATGTCAACGACCTGGAGCCTCCCGCCTTCCAGTGCATTCC
TGGCCTCAAAACAATCAAAGAGTCTCTGCTCTCGAAAGGGTTCGCCGCCG
TGATGATGTCCGGCAGTGGCACGTCCATCTTCGCCATGGCCCCTCCCTCC
CTCCCTGCCTCCTTTGATGCGGCGGCATTTGCACAAGAGATGGACGTAGA
CGTATGGGCCACCACCTTCACAGGTCGGCCCGAGAACGACCCCAGGGCGT
GGTATCCCAATCCACACGCCTAG
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protein sequence of NO03G05110.1

>NO03G05110.1-protein ID=NO03G05110.1-protein|Name=NO03G05110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=391bp
MAQQQRRWQLPPSACLLVACLVLLLPDPTTAFAPPLNGNGLGHATSPSSF
APRTAMSLPSSTRARLFVVAGTPSSSLESRRKEGNFDLELFSPAKVNLFL
RIIRRREDGYHELASLFQTVAFGDTLLFKALPASATQDEFASSFTSLVTD
KSNLVLRALDLFRRKTGKTRHFQVYLEKRTPVQAGLGGGSSNAATTLFAA
NQLLGCPASDEDLIEWSKELGSDITFFLSQGTAYCTGRGEILEPVPALSP
STHLYIVKPPIGLSTPAVFKALDLNALSKEDPRALLSAFTTRLGKGEPVP
PSLYVNDLEPPAFQCIPGLKTIKESLLSKGFAAVMMSGSGTSIFAMAPPS
LPASFDAAAFAQEMDVDVWATTFTGRPENDPRAWYPNPHA*
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Synonyms
Publications