NO03G05090, NO03G05090 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G05090 vs. NCBI_GenBank
Match: XP_008891750.1 (hypothetical protein PPTG_02428 [Phytophthora parasitica INRA-310] >ETL96543.1 hypothetical protein L917_06000 [Phytophthora parasitica] >ETM49697.1 hypothetical protein L914_06120 [Phytophthora parasitica] >ETN22503.1 hypothetical protein PPTG_02428 [Phytophthora parasitica INRA-310] >ETO78763.1 hypothetical protein F444_06373 [Phytophthora parasitica P1976]) HSP 1 Score: 250.4 bits (638), Expect = 1.800e-62 Identity = 124/282 (43.97%), Postives = 156/282 (55.32%), Query Frame = 0 Query: 302 EELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFF--SEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCE-TPVLGDPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSFLQLVFVGPAAFVLGTVFYLLCFPCFLFKC 581 EE C IC +Y V+ ++ LS CGH FC C +YLE KI EGQV P CFF SED C + DI++LV E W KY +FKF K++ R CP+C+ + + + PE C C R FC+ HSNAH GR+C EY+++M E N A+IS +KPCPGC N VEK GGCNQM CV C +CW+C K +D FP HFQWWNVRGC QM D+ + V+ L V GP AFV+ VF ++C CF C Sbjct: 244 EETFLCQICYDYASVNTSYGLSVCGHTFCEACLRNYLEFKIKEGQVYPKCFFEKSED-----------------KVACKAEISVDDIQSLVSDEIWQKYNKFKFNKEHELARQCPYCDHSQICAGSDHPECVCEACNREFCFVHSNAHQGRTCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDTVFPEHFQWWNVRGCAGNQM-ADIEGQGATQKGIGLVMRILFFVIFGPPAFVMAVVFSIMC--CFFLPC 505
BLAST of NO03G05090 vs. NCBI_GenBank
Match: ETP47744.1 (hypothetical protein F442_06353 [Phytophthora parasitica P10297]) HSP 1 Score: 250.4 bits (638), Expect = 1.800e-62 Identity = 124/282 (43.97%), Postives = 156/282 (55.32%), Query Frame = 0 Query: 302 EELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFF--SEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCE-TPVLGDPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSFLQLVFVGPAAFVLGTVFYLLCFPCFLFKC 581 EE C IC +Y V+ ++ LS CGH FC C +YLE KI EGQV P CFF SED C + DI++LV E W KY +FKF K++ R CP+C+ + + + PE C C R FC+ HSNAH GR+C EY+++M E N A+IS +KPCPGC N VEK GGCNQM CV C +CW+C K +D FP HFQWWNVRGC QM D+ + V+ L V GP AFV+ VF ++C CF C Sbjct: 244 EETFLCQICYDYASVNTSYGLSVCGHTFCEACLRNYLEFKIKEGQVYPKCFFEKSED-----------------KVACKAEISVDDIQSLVSDEIWQKYNKFKFNKEHELARQCPYCDHSQICAGSDHPECVCEACNREFCFVHSNAHQGRTCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDTVFPEHFQWWNVRGCAGNQM-ADIEGQGATQKGIGLVMRILFFVIFGPPAFVMAVVFSIMC--CFFLPC 505
BLAST of NO03G05090 vs. NCBI_GenBank
Match: KUF80820.1 (hypothetical protein AM587_10016070 [Phytophthora nicotianae]) HSP 1 Score: 250.4 bits (638), Expect = 1.800e-62 Identity = 124/282 (43.97%), Postives = 156/282 (55.32%), Query Frame = 0 Query: 302 EELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFF--SEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCE-TPVLGDPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSFLQLVFVGPAAFVLGTVFYLLCFPCFLFKC 581 EE C IC +Y V+ ++ LS CGH FC C +YLE KI EGQV P CFF SED C + DI++LV E W KY +FKF K++ R CP+C+ + + + PE C C R FC+ HSNAH GR+C EY+++M E N A+IS +KPCPGC N VEK GGCNQM CV C +CW+C K +D FP HFQWWNVRGC QM D+ + V+ L V GP AFV+ VF ++C CF C Sbjct: 211 EETFLCQICYDYASVNTSYGLSVCGHTFCEACLRNYLEFKIKEGQVYPKCFFEKSED-----------------KVACKAEISVDDIQSLVSDEIWQKYNKFKFNKEHELARQCPYCDHSQICAGSDHPECVCEACNREFCFVHSNAHQGRTCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDTVFPEHFQWWNVRGCAGNQM-ADIEGQGATQKGIGLVMRILFFVIFGPPAFVMAVVFSIMC--CFFLPC 472
BLAST of NO03G05090 vs. NCBI_GenBank
Match: XP_009826534.1 (hypothetical protein H257_03923 [Aphanomyces astaci] >ETV84842.1 hypothetical protein H257_03923 [Aphanomyces astaci]) HSP 1 Score: 250.0 bits (637), Expect = 2.300e-62 Identity = 121/280 (43.21%), Postives = 154/280 (55.00%), Query Frame = 0 Query: 303 ELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAE-TWAKYERFKFQKKNRNGRICPWCETPVLGDPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVA-PPSPSHIRWMKVVSFLQLVFVGPAAFVLGTVFYLL---CFPCFL 578 E +C IC EY V+ T L CGHRFC C Y+ KI +G V PTCFF+ P GG +P C ++ D++AL+ +E WAKYE+FKF K++ N R CP C + P + C C + +C+ HSNAH G SC +YE+ E+ N A IS AK CPGC +PVEK+GGCNQM C+ CG ++CWLCG+ V G FP HFQWWN+ GC QM E PS +H M + V GP A VL L C PC + Sbjct: 164 ETCYCQICLEYVDVATTIALDACGHRFCIECLEGYVTSKITDGMVYPTCFFAFPPEDGG----------AVPSTCHAAIQATDLRALITSEDVWAKYEKFKFNKEHANARECPHCHHVQVSAAANPTISCDACRQVYCFSHSNAHPGMSCADYEKARRAEDKLNHAKISQIAKFCPGCKSPVEKSGGCNQMKCITCGINFCWLCGQEVGDGVFPEHFQWWNLAGCAGAQMSEAATRKPSFAHKAMMFLFRLALCVIFGPPALVLTLACSALACCCVPCLI 433
BLAST of NO03G05090 vs. NCBI_GenBank
Match: XP_002901747.1 (RING-finger-containing E3 ubiquitin ligase, putative [Phytophthora infestans T30-4] >EEY57137.1 RING-finger-containing E3 ubiquitin ligase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 236.1 bits (601), Expect = 3.500e-58 Identity = 126/312 (40.38%), Postives = 168/312 (53.85%), Query Frame = 0 Query: 274 NLSALGEITRHVSQSFQLTVD----IVKTHLG---EELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCE-TPVLGDPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSFLQLVFVGPAAFVLGTVFYLLCFPCFL 578 ++S+L R S S +V + ++LG EE C IC +Y + ++ LS CGH FC C +YLE KI EGQV P CFF E+ +T C + DI++LV W K+ +FKF K++ R CP+C+ + + + PE C C R FC+ HS+AH G SC EY+++M E N A+IS +KPCPGC N VEK GGCNQM CV C +CW+C K +D FP HFQWWNVRGC QM D+ + V+ + V GP A V+ VF +LC CFL Sbjct: 148 DISSLTAYRRQESNSLSHSVPSLFRSMASYLGLSMEETFLCQICYDYAPMKTSYALSVCGHLFCEACLRNYLEFKIKEGQVYPKCFF---------EISEDKT------ACNAEIAVDDIQSLVSDGVWQKHNKFKFNKEHELARQCPYCDHSQLCAGSDHPECVCEACNREFCFVHSSAHQGHSCAEYDKKMIAVEKLNNALISKISKPCPGCQNNVEKTGGCNQMKCVVCTTSFCWICLKVIDDTVFPEHFQWWNVRGCAGNQM-ADIEGQGSTQKGVGIVMRIIFFVIFGPPALVMAVVFSVLCC-CFL 442
BLAST of NO03G05090 vs. NCBI_GenBank
Match: OWZ20152.1 (RING-finger-containing E3 ubiquitin ligase [Phytophthora megakarya]) HSP 1 Score: 233.0 bits (593), Expect = 3.000e-57 Identity = 116/264 (43.94%), Postives = 144/264 (54.55%), Query Frame = 0 Query: 302 EELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFF--SEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCE-TPVLGDPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSFLQLVFVGPAAF 563 EE C IC +Y V+ ++ LS CGH FC C +YLE KI EGQV P CFF SED C + DI+ LV E W KY +FKF K++ R CP+C+ + + + PE C C R FC+ HS+AH GR+C EY+++M E N A+IS +K CPGC N VEK GGCNQM CV C +CW+C K +D FP HFQWWNVRGC QM E S + V+ L V GP AF Sbjct: 192 EETFLCQICYDYAPVNTSYALSICGHTFCETCVKNYLEFKIKEGQVYPKCFFEKSEDKTA-----------------CKADIAVDDIRLLVSEEVWQKYNKFKFNKEHELARQCPYCDHSQICAGSDNPECVCEACNREFCFVHSSAHQGRTCAEYDKKMIAVEKLNNALISKISKQCPGCQNNVEKTGGCNQMKCVVCNTSFCWICLKVIDDSVFPEHFQWWNVRGCAGNQMAEIEGQGSTQKGIGI-VLRVLFFVIFGPPAF 437
BLAST of NO03G05090 vs. NCBI_GenBank
Match: XP_008870592.1 (hypothetical protein H310_07079 [Aphanomyces invadans] >XP_008870593.1 hypothetical protein, variant [Aphanomyces invadans] >ETW00457.1 hypothetical protein H310_07079 [Aphanomyces invadans] >ETW00458.1 hypothetical protein, variant [Aphanomyces invadans]) HSP 1 Score: 229.6 bits (584), Expect = 3.300e-56 Identity = 119/291 (40.89%), Postives = 152/291 (52.23%), Query Frame = 0 Query: 303 ELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRA-ETWAKYERFKFQKKNRNGRICPWCETPVLGDPE--KPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVA--PPSPSHIRWMKVVSFLQLVFVGPAAFVLGTVFYLL---CFPCFLFKCIGQRE 586 E +C IC EY V+ T L+ CGHRFC C Y+ KI +G V PTCFF+ P G + IP C + D++A++ + E W+KYE+FKF K++ N R CP+C + P + C EYE+ EE NQA IS AK CPGC +PVEK+GGCNQM C+ CG H+CWLCGK VD G FP HFQWWN+ GC QM E A P + I W L +VF GP AF++ F ++ C PC C+ RE Sbjct: 161 ETCYCQICLEYVDVASTIMLNACGHRFCIECMEGYVASKITDGLVYPTCFFTSPPSDDGSDSA-------IPTTCHAAIHPTDLRAVISSDEVWSKYEKFKFNKEHANARECPFCHHVQVSATAAVDPAITCXXXXXXXXXXXXXXXXXXXXVEYEKSRRAEEKLNQAKISQIAKLCPGCKSPVEKSGGCNQMKCITCGIHFCWLCGKQVDDGVFPEHFQWWNLAGCAGAQMSESTAGQPSMLNKISWFLFRLVLCIVF-GPPAFLMAIAFSIIGCCCIPC----CMTSRE 439
BLAST of NO03G05090 vs. NCBI_GenBank
Match: XP_009826535.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV84843.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 228.0 bits (580), Expect = 9.500e-56 Identity = 115/283 (40.64%), Postives = 151/283 (53.36%), Query Frame = 0 Query: 303 ELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAE-TWAKYERFKFQKKNRNGRICPWCETPVLGDPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSFLQLVFVGPAAFVLGTVFYLLCFPCFLFKCIGQR 585 E +C IC EY V+ T L CGHRFC C Y+ KI +G V PTCFF+ P GG +P C ++ D++AL+ +E WAKYE+FKF K++ N R CP C + P + C C + +C+ HSNAH G SC +YE+ E+ N A IS AK CPGC +PVEK+GGCNQM C+ CG ++CWLCG+ V G FP HFQ VR P P S+ W +V+ L P +L + Y F +L C G+R Sbjct: 164 ETCYCQICLEYVDVATTIALDACGHRFCIECLEGYVTSKITDGMVYPTCFFAFPPEDGG----------AVPSTCHAAIQATDLRALITSEDVWAKYEKFKFNKEHANARECPHCHHVQVSAAANPTISCDACRQVYCFSHSNAHPGMSCADYEKARRAEDKLNHAKISQIAKFCPGCKSPVEKSGGCNQMKCITCGINFCWLCGQEVGDGVFPEHFQ---VRPVP---------PSHRSYFAWSRVMISTYLCTSRPTCVLLDLLVY---FSTYLCTCCGRR 421
BLAST of NO03G05090 vs. NCBI_GenBank
Match: XP_024571718.1 (Predicted E3 ubiquitin ligase [Plasmopara halstedii] >XP_024582224.1 Predicted E3 ubiquitin ligase [Plasmopara halstedii] >CEG45855.1 Predicted E3 ubiquitin ligase [Plasmopara halstedii] >CEG35349.1 Predicted E3 ubiquitin ligase [Plasmopara halstedii]) HSP 1 Score: 221.9 bits (564), Expect = 6.800e-54 Identity = 111/269 (41.26%), Postives = 144/269 (53.53%), Query Frame = 0 Query: 275 LSALGEITRHVSQSFQL----TVDIVKTHLG----EELVFCSICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFSEDPRGGGREVGGRRTPVIIPPPCAKRVEEGDIKALVRAETWAKYERFKFQKKNRNGRICPWCE-TPVLGDPEKPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQED 535 +S L TRH +F+ ++ + +LG EL C IC +Y VSK++ L CGH FC+ C S+LE KI EGQV P CFF E+ C + DI+ALV W KY FKF K + R CP+C+ + V E PE C C R FC+ H+NAH +C YE+ M E N ++IS ++ CPGC N VEK GGCNQM CV C +CW+C K +D FP HFQWWN+RGC QM ++ Sbjct: 202 ISNLAIFTRHERTNFRHSMPDSLQSMVNYLGLSNLNELFLCQICYDYVPVSKSYALVVCGHIFCQACLKSFLEFKIKEGQVYPKCFF---------EISKNEA------ACNAAISVDDIQALVSQRVWQKYTTFKFNKDHELARQCPYCDHSQVCAGSENPECICEACNREFCFLHNNAHQDETCAAYERSMIAIEKLNNSLISKISRRCPGCQNYVEKIGGCNQMKCVVCSTSFCWICLKIIDDSVFPEHFQWWNIRGCAGNQMLDN 455
BLAST of NO03G05090 vs. NCBI_GenBank
Match: CBJ25995.1 (Predicted E3 ubiquitin ligase [Ectocarpus siliculosus]) HSP 1 Score: 217.2 bits (552), Expect = 1.700e-52 Identity = 130/380 (34.21%), Postives = 172/380 (45.26%), Query Frame = 0 Query: 309 ICREYEGVSKTFRLSGCGHRFCRCCFASYLECKICEGQVKPTCFFS--------EDPRGGGREVGGRRTPVI---------------------------------IPPPCAKRVEEGDIKALVR--AETWAKYERFKFQKKNRNGRICPWCETPVLGDPE-KPEMECGKCGRGFCYFHSNAHVGRSCTEYEQRMHEEELKNQAMISSFAKPCPGCGNPVEKAGGCNQMFCVWCGEHWCWLCGKFVDKGTFPNHFQWWNVRGCPNMQMQEDVAPPSPSHIRWMKVVSFLQLVFVGPAAFVLGTVFYLLCFPCFLFKCIGQREREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQYTGCVSFWGNTLLGLLLIPFFL 645 IC + F LS CGH FCR C +Y+ KI + + P S E+ + G G R P + C + DIK L++ A T KY RF F ++++ R CP C +GDP EM CG+CG FCY H AH G++C EY + +E + A+I KPCPGC PVEK GGCNQM C+ C +CW+C + VD+GTFP HFQWWNVRGCPN Q+QED + SP + K++S +Q+V VGP A +L L C C + R Q +TGC+S WGN ++ L L+P L Sbjct: 5 ICLDDRPAEAGFVLSACGHVFCRECLKAYVTSKINDAEFIPRALTSTKGFAPWKEERKSGVPWGWGGRGPAVGVDARGGXXXXXXXXXXXXXXXXXXXXXXXXXXXREGCGAVIRPSDIKVLIKTDATTQRKYARFLFSREHKTARECPRCANLSVGDPSVSLEMRCGECGYVFCYEHGGAHQGKTCAEYVEATADETNRTMALIGRITKPCPGCQTPVEKLGGCNQMVCMHCNCSFCWICMEPVDRGTFPVHFQWWNVRGCPNQQLQED-SHQSPRGRQCHKLLSAVQIVVVGPLALLLTAASSLACVCCLPAFRLPPR------------------------------------QLFTGCISGWGNFVMVLPLLPVVL 347 The following BLAST results are available for this feature:
BLAST of NO03G05090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G05090 ID=NO03G05090|Name=NO03G05090|organism=Nannochloropsis oceanica|type=gene|length=2736bpback to top protein sequence of NO03G05090.1 >NO03G05090.1-protein ID=NO03G05090.1-protein|Name=NO03G05090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=749bpback to top Synonyms
Publications
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