NO03G04720, NO03G04720 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO03G04720
Unique Name	NO03G04720
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2066
Alignment location	chr3:1344586..1346651 -

Link to JBrowse

Properties


Property Name	Value
Description	Homoserine kinase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr3	genome	chr3:1344586..1346651 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0004413	homoserine kinase activity
GO:0005524	ATP binding
GO:0016301	kinase activity
GO:0000166	nucleotide binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006566	threonine metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR036554	GHMP_kinase_C_sf
IPR020568	Ribosomal_S5_D2-typ_fold
IPR000870	Homoserine_kinase
IPR006204	GHMP_kinase_N_dom
IPR013750	GHMP_kinase_C_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Homology

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BLAST of NO03G04720 vs. NCBI_GenBank
Match: EWM29906.1 (homoserine kinase [Nannochloropsis gaditana])

HSP 1 Score: 759.2 bits (1959), Expect = 6.700e-216
Identity = 384/423 (90.78%), Postives = 399/423 (94.33%), Query Frame = 0

Query:    1 MPKSFGDRAGDMLVGAALTASLGAVALLLRKRK-KGQGPDDSVKKAILEALDEARQSHPNIKLPHQHERKMQERMGRISAAEEDLHSEGQERRMVTVRVPATSANLGPGYDTIGMALDMWSEITVERADKFEIIAEGEGSDDVPRDETNLVVTGMKAAFAAAKKPMPVLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAASIEGHPDNVAPAIYGGIQLGLHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLSETVSRNDAVYNIGRVAWLVNALSTSNMDNLHIGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVVRFKGDV 423
            MPKS  DRAGDML+GA   ASLGA+A LL+ RK  G+G D+SVKKAILEALDEAR SHPNIKLPHQHERKMQERM R+ A E+DLHSEG ERR VTVRVPATSANLGPGYDTIGMALDMWSEITVERAD+FEI+AEGEG+DDVP+DE+NLVVTGMKAAFAAAKKPMP+LKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAA IEGHPDNVAPAIYGGIQLG+HTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVL   V R DAVYNIGRVAWLVNALSTSN+DNL  GVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVVRFKGDV
Sbjct:    1 MPKSMSDRAGDMLLGATFAASLGAIAFLLKLRKGNGKGTDESVKKAILEALDEARHSHPNIKLPHQHERKMQERM-RLHAVEDDLHSEGPERRKVTVRVPATSANLGPGYDTIGMALDMWSEITVERADRFEIVAEGEGADDVPKDESNLVVTGMKAAFAAAKKPMPLLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAACIEGHPDNVAPAIYGGIQLGIHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLDSKVERKDAVYNIGRVAWLVNALSTSNLDNLRFGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVVRFKGDV 422

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BLAST of NO03G04720 vs. NCBI_GenBank
Match: XP_002181002.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC47654.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 477.6 bits (1228), Expect = 3.900e-131
Identity = 246/416 (59.13%), Postives = 305/416 (73.32%), Query Frame = 0

Query:   14 VGAALTASLGAVALLLRKRKKGQGPDDSV-------KKAILEALDEARQSHPNIKLPHQHERKMQERMGRISAAEEDLHSEGQERRMVTVRVPATSANLGPGYDTIGMALDMWSEITVERADKFEIIAEGEGSDDVPRDETNLVVTGMKAAFAAAKKPMPVLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAASIEGHPDNVAPAIYGGIQLGLHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLSETVSRNDAVYNIGRVAWLVNALSTSNMDNLHIGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVVRFKGDV 423
            VGAA+  +  AVA+L     +   P D         +K      +    S  ++  PH HE +M+ ++   +A EED       R  VTVRVPATSAN+GPGYDTIGMA+D+WSE+TVERAD FEI AEGEG+ ++P+DETN +V G KAAF AA KP+P+LKYH  +R+P+ARGLGSSSAAIVAG+IAGL+LAGH+LPCWGSE LLQ+AA IEGHPDNVAP IYGGIQ+G+H G RW +ERV  P G+QLV+FIPDFIGKTSDAR VL  T+SR DA YNI RVA+LV+AL   N+DNL  GVED LHQPQRG  +YK+LYP+IEAA  AGA   +LSGAGPTVMAIT+GASGDIFAQR  ER D  VA+AM + A+  GV+GQV +T+ +  GA+VV   P FS+  + ++ ++
Sbjct:   14 VGAAIAGAGVAVAVLKYSPARYSAPKDEEPSFPPLHQKRTSFIYENNASSSNSVIFPHNHEERMRRQITARAAVEED---NFMPRDSVTVRVPATSANMGPGYDTIGMAVDLWSEVTVERADTFEITAEGEGATEMPKDETNYMVIGCKAAFEAANKPLPILKYHVFSRVPFARGLGSSSAAIVAGIIAGLILAGHRLPCWGSEALLQIAAGIEGHPDNVAPVIYGGIQVGIHNGTRWVTERVPCPAGLQLVMFIPDFIGKTSDARSVLQPTISREDAAYNISRVAFLVHALCVGNLDNLKWGVEDRLHQPQRGGKLYKYLYPMIEAAENAGAACAYLSGAGPTVMAITAGASGDIFAQREKERSDLAVAKAMRQAAKEFGVQGQVVVTNVSNEGARVVKVVPPFSTGGITYRDNI 426

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BLAST of NO03G04720 vs. NCBI_GenBank
Match: XP_002291420.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91527.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 476.1 bits (1224), Expect = 1.100e-130
Identity = 226/361 (62.60%), Postives = 292/361 (80.89%), Query Frame = 0

Query:   62 LPHQHERKMQERMGRISAAEEDLHSEGQERRMVTVRVPATSANLGPGYDTIGMALDMWSEITVERADKFEIIAEGEGSDDVPRDETNLVVTGMKAAFAAAKKPMPVLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAASIEGHPDNVAPAIYGGIQLGLHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLSETVSRNDAVYNIGRVAWLVNALSTSNMDNLHIGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVVRFKGDV 423
            +PH HE +M+ R+ +    EE+     Q R+ VTVRVPA+SAN GPGYD IG+A+D+W+E+T+ RA+KFEI AEGEG+ ++P+DE+NL+VTG+KAA+  A KP+P LKYH ++RIPYARGLGSSSAAIVAG+IAGLVLAGH+LP WGSE LLQ+AASIEGHPDNVAP IYGG Q+G+H G RW +ER+ +PPG+QLV+FIPDFIGKTS ARGVL +T+SR DA +NIGRVA+LV+AL+  N+DNL  GV+D +HQPQR +A+YKHLYP+I+AA  AGA   +LSGAGPTVMA TSGASGDIF QR  ER D++VA+AM++ A+   VKG++ +T   + GA+VV  +P FS+  + F+ +V
Sbjct:    1 MPHSHEERMRRRIAQRMTIEEE---NSQPRQSVTVRVPASSANCGPGYDCIGLAVDLWTEVTISRAEKFEITAEGEGAAEMPKDESNLLVTGVKAAYETADKPIPPLKYHVVSRIPYARGLGSSSAAIVAGIIAGLVLAGHRLPVWGSESLLQIAASIEGHPDNVAPVIYGGFQIGIHNGTRWITERIPSPPGLQLVMFIPDFIGKTSAARGVLKDTISRTDAAFNIGRVAFLVHALAVGNLDNLKWGVQDKMHQPQRAEALYKHLYPMIKAAEEAGACCAYLSGAGPTVMAYTSGASGDIFTQREKERTDFSVAKAMMQVAQTYNVKGRIVVTQATQEGARVVKVDPPFSTADITFRDNV 358

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BLAST of NO03G04720 vs. NCBI_GenBank
Match: GAX12957.1 (homoserine kinase [Fistulifera solaris])

HSP 1 Score: 474.6 bits (1220), Expect = 3.300e-130
Identity = 230/352 (65.34%), Postives = 283/352 (80.40%), Query Frame = 0

Query:   63 PHQHERKMQERMGRISAAEEDLHSEGQERRMVTVRVPATSANLGPGYDTIGMALDMWSEITVERADKFEIIAEGEGSDDVPRDETNLVVTGMKAAFAAAKKPMPVLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAASIEGHPDNVAPAIYGGIQLGLHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLSETVSRNDAVYNIGRVAWLVNALSTSNMDNLHIGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSK 415
            PH HE +M+ ++      EE+       R  VTVRVPATSAN+GPGYDTIGMA+D+WSE+TV R+DKF+I  EG+G++++P+DE+N +V G KAAF AA+KPMPVL YH ++RIP+ARGLGSSSAAIVAG+IAGL+LAGH+LPCWGSE LLQ+AA IEGHPDNVAPAIYGGIQ+G+H G RW +ERV  PPG+QLV+FIPDFIGKTSDAR VL   ++R+DA +NI R A+LV ALST+N+DNL  GV+D LHQPQRG  +YK+LYP+IEAA AAGA+  +LSGAGPTVMAITSGASGDIFAQR  ER D +VA AM++TAE  G+KG + +T  A  GA V    P FS++
Sbjct:   76 PHNHEERMRRQIAARQVVEEE---NAMARDSVTVRVPATSANMGPGYDTIGMAVDLWSEVTVSRSDKFQITGEGDGANEMPKDESNYLVLGCKAAFEAARKPMPVLSYHVVSRIPFARGLGSSSAAIVAGIIAGLILAGHRLPCWGSEALLQIAAGIEGHPDNVAPAIYGGIQVGIHNGTRWATERVPAPPGLQLVMFIPDFIGKTSDARAVLQGGITRSDAAFNISRTAFLVLALSTNNLDNLKWGVQDKLHQPQRGGKLYKYLYPMIEAAEAAGAHCAYLSGAGPTVMAITSGASGDIFAQREKERSDSSVARAMMKTAEEFGIKGTILVTKAASEGAHVTKVVPPFSTE 424

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BLAST of NO03G04720 vs. NCBI_GenBank
Match: GAX15833.1 (homoserine kinase [Fistulifera solaris])

HSP 1 Score: 473.8 bits (1218), Expect = 5.600e-130
Identity = 230/352 (65.34%), Postives = 283/352 (80.40%), Query Frame = 0

Query:   63 PHQHERKMQERMGRISAAEEDLHSEGQERRMVTVRVPATSANLGPGYDTIGMALDMWSEITVERADKFEIIAEGEGSDDVPRDETNLVVTGMKAAFAAAKKPMPVLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAASIEGHPDNVAPAIYGGIQLGLHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLSETVSRNDAVYNIGRVAWLVNALSTSNMDNLHIGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSK 415
            PH HE +M+ ++      EE+       R  VTVRVPATSAN+GPGYDTIGMA+D+WSE+TV R+DKF+I  EG+G++++P+DE+N +V G KAAF AA+KPMPVL YH ++RIP+ARGLGSSSAAIVAG+IAGL+LAGH+LPCWGSE LLQ+AA IEGHPDNVAPAIYGGIQ+G+H G RW +ERV  PPG+QLV+FIPDFIGKTSDAR VL   ++R+DA +NI R A+LV ALST+N+DNL  GV+D LHQPQRG  +YK+LYP+IEAA AAGA+  +LSGAGPTVMAITSGASGDIFAQR  ER D +VA AM++TAE  G+KG + +T  A  GA V    P FS++
Sbjct:   76 PHNHEERMRRQIAARQVVEEE---NAVARDSVTVRVPATSANMGPGYDTIGMAVDLWSEVTVSRSDKFQITGEGDGANEMPKDESNYLVLGCKAAFEAARKPMPVLSYHVVSRIPFARGLGSSSAAIVAGIIAGLILAGHRLPCWGSEALLQIAAGIEGHPDNVAPAIYGGIQVGIHNGTRWATERVPAPPGLQLVMFIPDFIGKTSDARAVLQGGITRSDAAFNISRTAFLVLALSTNNLDNLKWGVQDKLHQPQRGGKLYKYLYPMIEAAEAAGAHCAYLSGAGPTVMAITSGASGDIFAQREKERSDSSVARAMMKTAEEFGIKGTILVTKAASEGAHVTKVVPPFSTE 424

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BLAST of NO03G04720 vs. NCBI_GenBank
Match: CBN80140.1 (homoserine kinase [Ectocarpus siliculosus])

HSP 1 Score: 458.0 bits (1177), Expect = 3.200e-125
Identity = 225/346 (65.03%), Postives = 272/346 (78.61%), Query Frame = 0

Query:   78 SAAEEDLHSEGQERRMVTVRVPATSANLGPGYDTIGMALDMWSEITVERADKFEIIAEGEGSDDVPRDETNLVVTGMKAAFAAAKKPMPVLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAASIEGHPDNVAPAIYGGIQLGLHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLSETVSRNDAVYNIGRVAWLVNALSTSNMDNLHIGVEDALHQPQRGKA-VYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVVRFKGDV 423
            S  EE +     ER  V VRVPATSAN+GPG+D +GMAL +WSE+T+ER+DKFEI+ EG G ++VP DETNL+VTG KAAF AA K MP L+Y C+NRIPYARG+GSSSAAI+AGLI GLVLAGH+LP WG+EELLQLA  IEGHPDNVAP IYGG QLG+H   RW +ERV  PPGIQ+VLFIP+FIGKTSDAR VL + V R DA+++IGR+AWLV AL + N++NL  G ED +HQPQR +   YKH+ P+IEAA AAGA+  +LSG+GPTV AITSGA+GDIF QR  ERVD  VAEAM++ A +V V G+ +IT+P + GA VVSAEP FS   +R+ GDV
Sbjct:  122 SIREEVVREAAMERNRVVVRVPATSANMGPGFDCLGMALSIWSEVTMERSDKFEIVFEGAGFEEVPLDETNLLVTGAKAAFKAAGKAMPPLRYKCVNRIPYARGMGSSSAAILAGLIGGLVLAGHKLPMWGAEELLQLACEIEGHPDNVAPVIYGGCQLGIHNHTRWITERVQLPPGIQVVLFIPNFIGKTSDARAVLKDQVDRKDAIFSIGRIAWLVLALQSGNVNNLRAGCEDKMHQPQRARQDAYKHVNPMIEAAIAAGADTAYLSGSGPTVAAITSGAAGDIFLQRTKERVDKQVAEAMLQAAASVNVGGETFITTPTDGGAYVVSAEPKFSEGAIRYPGDV 467

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BLAST of NO03G04720 vs. NCBI_GenBank
Match: OEU14860.1 (homoserine kinase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 453.8 bits (1166), Expect = 6.000e-124
Identity = 217/337 (64.39%), Postives = 270/337 (80.12%), Query Frame = 0

Query:   91 RRMVTVRVPATSANLGPGYDTIGMALDMWSEITVERADK-----FEIIAEGEGSDDVPRDETNLVVTGMKAAFAAAKKPMPVLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAASIEGHPDNVAPAIYGGIQLGLHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLSETVSRNDAVYNIGRVAWLVNALSTSNMDNLHIGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVVRFKGDV 423
            R  VTVRVPATSAN+GPGYD IG+A+D+WSE+TV R  +     FEI AEGEG+D +P+DETN +V G KAAF  A KP+P LKYH ++RIPYARGLGSSSAAIVAG+IAGLVLAGH+LPCWGSE LLQ+AA IEGHPDNVAP IYGGIQLG+H G RW +ERV  PPG+Q+++FIPDF+GKTSDARGVL +TVSR DA +NIGR A+LV+A  T+N+DNL  G +D LHQPQRG  +YK+LYP+IEAA  AGA   +LSGAGPTVMA+TSGA+GDIFAQR  ER D  VA+AM++ A+  G+ G++ +T+    GA+VV  +P FS+  + ++ ++
Sbjct:   19 RDSVTVRVPATSANVGPGYDCIGIAVDLWSEVTVSRCPEGDEIGFEITAEGEGADAMPKDETNYLVVGCKAAFDTANKPLPPLKYHVVSRIPYARGLGSSSAAIVAGIIAGLVLAGHRLPCWGSEALLQIAAGIEGHPDNVAPVIYGGIQLGIHNGTRWLTERVANPPGLQMIIFIPDFVGKTSDARGVLQDTVSREDAAFNIGRAAFLVHAFETNNLDNLRWGAQDRLHQPQRGSKLYKYLYPMIEAAEKAGACCAYLSGAGPTVMALTSGAAGDIFAQREKERTDILVAKAMIQCAKDFGIDGKLLVTNVVSEGARVVKVDPPFSTGEITYRDNI 355

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BLAST of NO03G04720 vs. NCBI_GenBank
Match: GBG24940.1 (Homoserine kinase [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 420.2 bits (1079), Expect = 7.400e-114
Identity = 212/356 (59.55%), Postives = 266/356 (74.72%), Query Frame = 0

Query:   71 QERMGRISAAEEDLHSEG---QERRMVTVRVPATSANLGPGYDTIGMALDMWSEITVERADKFEIIAEGEGSDDVPRDETNLVVTGMKAAFAAAKKPMPVLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAASIEGHPDNVAPAIYGGIQLGLHTG--ERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLSETVSRNDAVYNIGRVAWLVNALSTSNMDNLHIGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVVRFKGD 422
            Q++ G  +A    L S+     ERR VTV+VPATSANLG GYD IGMALDMW+E+TVERADKFEI  EGEG+D +P D++NLVV G+KAAF AA K +P LKYH   RIP+ RGLGSSSAAIVAGL+AGL++AGH+L   G E+L+QLA  IEGHPDNVAPAIYGG+Q+GL+    +RW +ERV+ P G+  V+FIP F+GKTS+ R V+   VS  DAV+N+GR+AWLV AL++  + NL +G+ED LHQPQRG+ VY HLYPLI+A   AGA G +LSGAGP VMAIT+G SGD F Q  ++R D  VA AM   A+ +G++G+VYIT P   G  VV A+P FSS +V + G+
Sbjct:    8 QKQQGEGTARRSRLGSDKLLIMERRSVTVQVPATSANLGSGYDCIGMALDMWNELTVERADKFEITVEGEGADQIPLDDSNLVVVGVKAAFEAAGKSVPPLKYHLKQRIPFGRGLGSSSAAIVAGLLAGLIIAGHKLDVQGKEQLVQLATEIEGHPDNVAPAIYGGVQVGLYDSLEKRWATERVSLPHGLVFVMFIPSFVGKTSELRKVVPTEVSLQDAVFNMGRLAWLVLALTSGKVQNLRVGLEDRLHQPQRGEKVYHHLYPLIDACYEAGAAGAYLSGAGPVVMAITTGGSGDFFTQSFTQRTDQKVAAAMNAVAQRMGIEGKVYITHPTNVGGVVVRADPPFSSDLVVYNGE 363

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BLAST of NO03G04720 vs. NCBI_GenBank
Match: XP_008611819.1 (homoserine kinase [Saprolegnia diclina VS20] >EQC34947.1 homoserine kinase [Saprolegnia diclina VS20])

HSP 1 Score: 419.9 bits (1078), Expect = 9.700e-114
Identity = 209/330 (63.33%), Postives = 252/330 (76.36%), Query Frame = 0

Query:   94 VTVRVPATSANLGPGYDTIGMALDMWSEITVERADKFEIIAEGEGSDDVPRDETNLVVTGMKAAFAAAKKPMPVLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAASIEGHPDNVAPAIYGGIQLGLHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLSETVSRNDAVYNIGRVAWLVNALSTSNMDNLHIGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVV-RFKGDV 423
            VTVRVPAT+ANLGPG+D+IGMALD+W+E+TVERA  F    EGEG+  +P DETNL+V G+KAAF AA +PMP L+ HC NRIP+ARGLGSSSA IVAG+IAGLV+AGH+L   G EELLQ+AA IEGHPDNVAP IYGG+QLG+ T +RW S RV  P G+Q VLFIP+  GKTS AR +L E + R+DAVYNIGR A LVNA  + N+  L   V+D LHQPQRG A Y+HL+PLI+AA  AGA+GCFLSGAGP+V+AITSG SGDIF Q   ER +  VA+AM   A  VGVKG V+IT+P   GA +V   P  S  +V R++GD+
Sbjct:   54 VTVRVPATTANLGPGFDSIGMALDIWNELTVERAATFSFTNEGEGAGVLPTDETNLIVVGLKAAFEAAGQPMPTLRIHCRNRIPFARGLGSSSAGIVAGIIAGLVIAGHELSVHGKEELLQIAAGIEGHPDNVAPCIYGGLQLGIFTDDRWYSSRVQIPDGMQCVLFIPETTGKTSAARAILPEKIDRSDAVYNIGRAAILVNAFQSGNLPELRHAVQDRLHQPQRGAAQYRHLFPLIDAALEAGAHGCFLSGAGPSVLAITSGLSGDIFTQVARERAETKVADAMRDAAAQVGVKGCVFITNPEHRGAHIVKVHPKISDHMVARYEGDI 383

[Close]

BLAST of NO03G04720 vs. NCBI_GenBank
Match: OQR80987.1 (homoserine kinase [Achlya hypogyna])

HSP 1 Score: 419.9 bits (1078), Expect = 9.700e-114
Identity = 211/342 (61.70%), Postives = 257/342 (75.15%), Query Frame = 0

Query:   82 EDLHSEGQERRMVTVRVPATSANLGPGYDTIGMALDMWSEITVERADKFEIIAEGEGSDDVPRDETNLVVTGMKAAFAAAKKPMPVLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLAGHQLPCWGSEELLQLAASIEGHPDNVAPAIYGGIQLGLHTGERWTSERVNTPPGIQLVLFIPDFIGKTSDARGVLSETVSRNDAVYNIGRVAWLVNALSTSNMDNLHIGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPTVMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEHGAQVVSAEPAFSSKVV-RFKGDV 423
            +D H+    +  VTVRVPAT+AN+GPG+D+IGMALD+W+E+TVERAD+F  + EGEGSD +P DETNLVV G+KAAF AA + MP L+  C NRIP+ARGLGSSSA IVAG+IAGLV+AGH+L  +G EELLQ+AA IEGHPDNVAP IYGG+QLG+ T  RW S RV  P G+Q VLFIP+  GKTS AR +L   + R DAVYNIGR A LVNA  + N+  L   V+D LHQPQRG+A Y HL+PLI+AA  AGA+GCFLSGAGP+V+AITSG SGDIF Q   ER +  VA+AM   A  VGVKG V+IT+P   GA +V   P  S  +V R++GD+
Sbjct:   40 KDSHTGFGPKDSVTVRVPATTANMGPGFDSIGMALDIWNELTVERADEFSFVNEGEGSDVLPTDETNLVVVGLKAAFKAAGQEMPTLRILCRNRIPFARGLGSSSAGIVAGIIAGLVIAGHELSVYGKEELLQIAAGIEGHPDNVAPCIYGGLQLGIFTDNRWYSSRVQIPDGMQCVLFIPETTGKTSTARAILPAKIDRADAVYNIGRAAILVNAFRSGNLPELRHAVQDKLHQPQRGEAQYPHLFPLIDAALEAGAHGCFLSGAGPSVLAITSGLSGDIFTQMACERAETKVADAMRDAAAKVGVKGCVFITNPEHRGAHIVKVHPKISDHLVARYEGDI 381

The following BLAST results are available for this feature:

BLAST of NO03G04720 vs. NCBI_GenBank

BLAST of NO03G04720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM29906.1	6.700e-216	90.78	homoserine kinase [Nannochloropsis gaditana]	[more]
XP_002181002.1	3.900e-131	59.13	predicted protein [Phaeodactylum tricornutum CCAP ...	[more]
XP_002291420.1	1.100e-130	62.60	predicted protein [Thalassiosira pseudonana CCMP13...	[more]
GAX12957.1	3.300e-130	65.34	homoserine kinase [Fistulifera solaris]	[more]
GAX15833.1	5.600e-130	65.34	homoserine kinase [Fistulifera solaris]	[more]
CBN80140.1	3.200e-125	65.03	homoserine kinase [Ectocarpus siliculosus]	[more]
OEU14860.1	6.000e-124	64.39	homoserine kinase [Fragilariopsis cylindrus CCMP11...	[more]
GBG24940.1	7.400e-114	59.55	Homoserine kinase [Aurantiochytrium sp. FCC1311]	[more]
XP_008611819.1	9.700e-114	63.33	homoserine kinase [Saprolegnia diclina VS20] >EQC3...	[more]
OQR80987.1	9.700e-114	61.70	homoserine kinase [Achlya hypogyna]	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL069	nonsL069	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR000	ncniR000	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR054	ngnoR054	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK005412	NSK005412	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO03G04720.1	NO03G04720.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|573065	gene_1677	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100035g25	gene730	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO03G04720.1	NO03G04720.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO03G04720 ID=NO03G04720|Name=NO03G04720|organism=Nannochloropsis oceanica|type=gene|length=2066bp
CCACAGCTCTCATCCCTAGCACAGATCGGAGCCATGCCCAAGTCTTTTGG
AGACCGAGCGGGGGACATGCTTGTGGGTGCGGCGCTGACAGCCAGCTTGG
GCGCAGTGGCCCTCTTGCTAAGAAAACGAAAGAAGGGACAGgtacgtgtt
ggtcaatgtggtaatcgattgggataggggattgtatccaagccgtgtgt
acttggcgtgcagaggattatatggaaaaggttgggcaggattaaaaatt
ggcggaaagagagcgacggcgtgtggcttacgggtgatggtacaggtgga
gcttgactcaaggagggacagtcttgcacgaattggcgcgcctttcctgt
cttaatcacttgcaatttgaggcagcaaatgagctgctcgctatccttca
gtgaagtacgcctctgcttcttgccgatatcggtggcaaaccagccgtgt
gtcaagcagtgttgccgtttttccaaacccagagcaacacgttcataaca
ctcaggcccccatcccacccaaccgatctctcattccctcagGGTCCCGA
CGATTCGGTCAAGAAAGCCATTCTTGAGGCCCTGGATGAAGCCCGTCAAT
CCCATCCCAATATCAAACTCCCTCACCAACACGAACGAAAAATGCAAGAA
CGTATGGGGCGAATTTCAGCGGCCGAAGAAGACTTGCACAGTGAGGGACA
GGAACGCCGGATGGTCACCGTGCGAGTGCCCGCGACGTCCGCGAATTTGG
GGCCGGGATACGATACGATTGGGATGGCATTGGATATGTGGAGTGAGATA
ACAGTTGAACGGGCCGATAAGTTTGAAATCATTGCCGAGGGTGAGGGATC
GGATGACGTGCCTCGGGATGAGACCAACCTTGTGGTAACAGGTATGAAGG
CGGCGTTTGCTGCTGCTAAGAAACCTATGCCAGTTTTGAAGTACCATTGC
ATAAACCGTATTCCCTATGCGCGTGGGTTGGGCTCATCGTCTGCTGCGAT
TGTCGCCGGCCTGATTGCGGGCTTGGTGCTGGCGGGGCATCAGTTGCCAT
GTTGGGGTTCGGAGGAGTTGCTGCAGCTGGCAGCGTCTATTGAGGGACAT
CCAGATAATGTCGCCCCTGCGATTTATGGTGGGATTCAGTTGGGCTTGCA
CACGGGGGAGAGATGGACGAGTGAGCGCGTCAACACGCCTCCGGGTATCC
AGCTTGTGTTGTTTATTCCTGATTTTATTGGCAAGACAAGCGATGCCCGC
GGGGTACTTTCCGAGACGGTTTCGAGAAATGATGCCGTTTACAATATTGG
GAGGGTAGCGTGGTTGGTCAATGCCTTATCAACGTCTAACATGGACAATC
TTCACATTGGCGTTGAGGACGCACTGCACCAACCTCAGCGAGGCAAAGCC
GTTTACAAGCATCTGTATCCTTTGATCGAGGCTGCCAATGCAGCGGGTGC
AAATGGATGTTTTTTGTCAGGCGCGGGACCGACGGTGATGGCGATTACGA
GTGGGGCGTCGGGGGATATTTTTGCGCAGCGGTTGAGTGAGCGCGTGGAT
TGGACCGTGGCGGAGGCGATGGTGAGGACGGCAGAGGCGGTGGGCGTGAA
GGGACAGGTATATATCACAAGTCCGGCGGAGCATGGGGCACAAGTGGTGA
GTGCAGAGCCGGCGTTCTCGAGTAAGGTGGTGCGTTTTAAGGGCGATGTG
TAGGCTGGGGTCACTGCGGGAGATGTAGGCGTTTTGAAAAAGGAGGCAAG
ATTGAAGGAAGAAAGGAACTAGAAAAGAACGACAGCAGGTGAAGACAGTA
GATCTCCGGGCAAATGCTCTGAGTAGGAGGAGTAATTGATACTTTGGTTC
TTTTGTATGAGTGCGTACGTTTTGTGTGTACATTTGTCTCTTCGTCTGCG
GGCCTGATGGATTCACTTGCTCCTTCCCGCAGAAGAACAATGGAAAGGAT
GCTTATGGTGGGGACTGGCAGGTACTAATTGTGATTTTGCGGATTTACTC
GCACAAATTTAATCGTCACGACGAAACGGAGAAACAAATTTACATACAAG
ATAGTATCTTTACCAA

protein sequence of NO03G04720.1

>NO03G04720.1-protein ID=NO03G04720.1-protein|Name=NO03G04720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=423bp
MPKSFGDRAGDMLVGAALTASLGAVALLLRKRKKGQGPDDSVKKAILEAL
DEARQSHPNIKLPHQHERKMQERMGRISAAEEDLHSEGQERRMVTVRVPA
TSANLGPGYDTIGMALDMWSEITVERADKFEIIAEGEGSDDVPRDETNLV
VTGMKAAFAAAKKPMPVLKYHCINRIPYARGLGSSSAAIVAGLIAGLVLA
GHQLPCWGSEELLQLAASIEGHPDNVAPAIYGGIQLGLHTGERWTSERVN
TPPGIQLVLFIPDFIGKTSDARGVLSETVSRNDAVYNIGRVAWLVNALST
SNMDNLHIGVEDALHQPQRGKAVYKHLYPLIEAANAAGANGCFLSGAGPT
VMAITSGASGDIFAQRLSERVDWTVAEAMVRTAEAVGVKGQVYITSPAEH
GAQVVSAEPAFSSKVVRFKGDV*

Synonyms

Publications