NO03G04580, NO03G04580 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G04580 vs. NCBI_GenBank
Match: XP_007223938.1 (acylpyruvase FAHD1, mitochondrial [Prunus persica] >ONI28127.1 hypothetical protein PRUPE_1G125100 [Prunus persica]) HSP 1 Score: 253.8 bits (647), Expect = 4.900e-64 Identity = 120/214 (56.07%), Postives = 155/214 (72.43%), Query Frame = 0 Query: 9 TAARSSLINHGKKIIGVGKNYALHIKEMGGQAPKAPVLFLKPTTSYVFEGTPIRLHPKIGVVHHEVELALVIDKKARKVRPENAMQFVGGYALAIDLTARDIQEEAKKQGLPWTVAKGQDYFCPISNMLSKAQIPDPDDVGIWLRVNDEPRQRSNTKHMVHRTAFLVSYISHLFTLEPGDVILTGTPEGVGPIKAGDTVTAGIEGLMQMRFAVE 223 TAA L+ G KI+GVG+NYA H KE+G PK PVLFLKPT+SY+ G I + P + + HEVELA+VI KKAR V AM +V GYALA+D+TAR+IQ AK GLPWT+AKGQD F PIS++L K +PDPD++ +WL+V+ E RQ+ +TK M+ + FL+S+IS + TL GDVILTGTP+GVGP+K G +TAGI L+ + F VE Sbjct: 3 TAALEKLLQVGTKIVGVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLENGGTIEVPPPLLSLDHEVELAVVISKKARDVSQATAMDYVAGYALALDMTAREIQASAKSAGLPWTIAKGQDTFTPISSLLPKEMVPDPDNIELWLKVDGELRQKGSTKDMIFKLPFLISHISSIMTLLEGDVILTGTPKGVGPVKVGQKITAGITNLLDVEFNVE 216
BLAST of NO03G04580 vs. NCBI_GenBank
Match: XP_023526401.1 (probable acylpyruvase FAHD1, mitochondrial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 253.4 bits (646), Expect = 6.500e-64 Identity = 121/215 (56.28%), Postives = 160/215 (74.42%), Query Frame = 0 Query: 8 VTAARSSLINHGKKIIGVGKNYALHIKEMGGQAPKAPVLFLKPTTSYVFEGTPIRLHPKIGVVHHEVELALVIDKKARKVRPENAMQFVGGYALAIDLTARDIQEEAKKQGLPWTVAKGQDYFCPISNMLSKAQIPDPDDVGIWLRVNDEPRQRSNTKHMVHRTAFLVSYISHLFTLEPGDVILTGTPEGVGPIKAGDTVTAGIEGLMQMRFAVE 223 + A ++L+N G KIIGVG+NYA H KE+G PK PVLF+KPT+SY+ G I + + + HEVELA+VI +KAR V +AM +VGGYALA+D+TAR+IQ AK GLPWT+AKGQD F PIS++LSKA IPDPD++ +WL+V++E RQ+ +TK M+ + +L+S+IS TL GDVILTGTP GVGP+KAG VTAGI ++ + F VE Sbjct: 1 MATAYANLLNVGTKIIGVGRNYAAHAKELGNAIPKEPVLFMKPTSSYLQNGGTIEIPHALKSLDHEVELAVVISQKARDVPEASAMDYVGGYALALDMTAREIQASAKSAGLPWTMAKGQDTFTPISSVLSKASIPDPDNIELWLKVDNEFRQKGSTKDMIFKIPYLISHISSFMTLLEGDVILTGTPSGVGPVKAGQKVTAGITNIIDVHFNVE 215
BLAST of NO03G04580 vs. NCBI_GenBank
Match: PON62013.1 (Fumarylacetoacetase, C-terminal-related [Parasponia andersonii]) HSP 1 Score: 253.4 bits (646), Expect = 6.500e-64 Identity = 121/214 (56.54%), Postives = 158/214 (73.83%), Query Frame = 0 Query: 9 TAARSSLINHGKKIIGVGKNYALHIKEMGGQAPKAPVLFLKPTTSYVFEGTPIRLHPKIGVVHHEVELALVIDKKARKVRPENAMQFVGGYALAIDLTARDIQEEAKKQGLPWTVAKGQDYFCPISNMLSKAQIPDPDDVGIWLRVNDEPRQRSNTKHMVHRTAFLVSYISHLFTLEPGDVILTGTPEGVGPIKAGDTVTAGIEGLMQMRFAVE 223 TAA +++ G KI+GVG+NY H KE+G PK PVLFLKPT+SY+ G I + + +HHEVELA+VI KKAR V +AM +VGGYALA+D+TAR+IQ AK GLPWT+AKGQD F PIS++L KA + DPD++ +WL+V+ E RQ+ +TK M+ + FL+S+IS TL GDVILTGTPEGVGP+KAG +TAGI L+++ F VE Sbjct: 3 TAAFQNILQVGTKIVGVGRNYVAHAKELGNAVPKEPVLFLKPTSSYLEAGGTIEIPHPLESLHHEVELAVVIAKKARDVPQASAMDYVGGYALALDMTAREIQASAKSAGLPWTIAKGQDTFTPISSVLPKASVTDPDNLELWLKVDGELRQKGSTKDMIFKIPFLISHISTFMTLFEGDVILTGTPEGVGPVKAGQKITAGITNLLEVDFNVE 216
BLAST of NO03G04580 vs. NCBI_GenBank
Match: XP_020228932.1 (acylpyruvase FAHD1, mitochondrial-like [Cajanus cajan] >KYP58119.1 Fumarylacetoacetate hydrolase domain-containing protein 1 isogeny [Cajanus cajan]) HSP 1 Score: 253.1 bits (645), Expect = 8.400e-64 Identity = 119/213 (55.87%), Postives = 158/213 (74.18%), Query Frame = 0 Query: 10 AARSSLINHGKKIIGVGKNYALHIKEMGGQAPKAPVLFLKPTTSYVFEGTPIRLHPKIGVVHHEVELALVIDKKARKVRPENAMQFVGGYALAIDLTARDIQEEAKKQGLPWTVAKGQDYFCPISNMLSKAQIPDPDDVGIWLRVNDEPRQRSNTKHMVHRTAFLVSYISHLFTLEPGDVILTGTPEGVGPIKAGDTVTAGIEGLMQMRFAVE 223 AA L+ KI+ VG+NYA H KE+G PK PVLFLKPT+SY+ G I++ G +HHEVELA+VI KKAR V +AM +V GYALA+D+TARD+Q AK GLPW++AKGQD F PIS++L K+ +P+PDD+ +WL+V+++ RQ+ +TK M+ + FL+SYIS + TL GDVILTGTP GVGP+K G T+TAGI GL+ ++F VE Sbjct: 2 AACQKLLELSTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLKNGGTIQIPHNEGSLHHEVELAVVIAKKARDVSESSAMDYVAGYALALDMTARDLQAAAKSAGLPWSLAKGQDTFTPISSILPKSTVPNPDDIELWLKVDEDIRQKGSTKDMIFKIPFLISYISSVMTLFEGDVILTGTPPGVGPVKEGQTITAGITGLVDVQFNVE 214
BLAST of NO03G04580 vs. NCBI_GenBank
Match: XP_022137799.1 (acylpyruvase FAHD1, mitochondrial [Momordica charantia]) HSP 1 Score: 253.1 bits (645), Expect = 8.400e-64 Identity = 121/215 (56.28%), Postives = 159/215 (73.95%), Query Frame = 0 Query: 8 VTAARSSLINHGKKIIGVGKNYALHIKEMGGQAPKAPVLFLKPTTSYVFEGTPIRLHPKIGVVHHEVELALVIDKKARKVRPENAMQFVGGYALAIDLTARDIQEEAKKQGLPWTVAKGQDYFCPISNMLSKAQIPDPDDVGIWLRVNDEPRQRSNTKHMVHRTAFLVSYISHLFTLEPGDVILTGTPEGVGPIKAGDTVTAGIEGLMQMRFAVE 223 + A ++L+N G KII VG+NYA H KE+G PK PVLF+KPT+SY+ G I + + + HEVELA+VI ++AR V +AM +VGGYALA+D+TAR+IQ AK GLPWTVAKGQD F PIS++L KA IPDPDD+ +WL+V+DE RQ+ +TK M+ + +L+S+IS + TL GDVILTGTP GVGP+KAG VTAGI ++ + F VE Sbjct: 1 MATAYANLLNVGTKIIAVGRNYAAHAKELGNAVPKEPVLFMKPTSSYLQNGGTIEIPHPLKSLDHEVELAVVISQRARDVPEASAMDYVGGYALALDMTAREIQASAKSAGLPWTVAKGQDTFTPISSVLPKASIPDPDDLELWLKVDDEFRQKGSTKDMIFKIPYLISHISSVMTLLEGDVILTGTPSGVGPVKAGQKVTAGITNIIDIHFNVE 215
BLAST of NO03G04580 vs. NCBI_GenBank
Match: XP_003550362.1 (PREDICTED: acylpyruvase FAHD1, mitochondrial [Glycine max] >KHN03345.1 Acylpyruvase FAHD1, mitochondrial [Glycine soja] >KRH02275.1 hypothetical protein GLYMA_17G028100 [Glycine max]) HSP 1 Score: 252.3 bits (643), Expect = 1.400e-63 Identity = 118/213 (55.40%), Postives = 156/213 (73.24%), Query Frame = 0 Query: 10 AARSSLINHGKKIIGVGKNYALHIKEMGGQAPKAPVLFLKPTTSYVFEGTPIRLHPKIGVVHHEVELALVIDKKARKVRPENAMQFVGGYALAIDLTARDIQEEAKKQGLPWTVAKGQDYFCPISNMLSKAQIPDPDDVGIWLRVNDEPRQRSNTKHMVHRTAFLVSYISHLFTLEPGDVILTGTPEGVGPIKAGDTVTAGIEGLMQMRFAVE 223 A L+ KI+ VG+NYA H KE+G PK PVLFLKPT+SY+ G I++ G +HHEVELA+VI KKAR V +AM +V GYALA+D+TARD+Q AK GLPW++AKGQD F PIS++L K +P+PDD+ +WL+V++E RQ+ +TK M+ + FL+SY+S + TL GDVILTGTP GVGP+K G T+TAGI GL+ ++F VE Sbjct: 4 AGCQKLLELSTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLSNGGTIQIPHNEGSLHHEVELAVVISKKARDVSESSAMDYVAGYALALDMTARDLQAAAKSAGLPWSLAKGQDTFTPISSILPKTTVPNPDDLELWLKVDEEIRQKGSTKDMIFKIPFLISYVSSVMTLFEGDVILTGTPPGVGPVKEGQTITAGITGLVDVQFNVE 216
BLAST of NO03G04580 vs. NCBI_GenBank
Match: XP_008810209.1 (PREDICTED: acylpyruvase FAHD1, mitochondrial-like [Phoenix dactylifera]) HSP 1 Score: 252.3 bits (643), Expect = 1.400e-63 Identity = 122/218 (55.96%), Postives = 160/218 (73.39%), Query Frame = 0 Query: 5 VAAVTAARSSLINHGKKIIGVGKNYALHIKEMGGQAPKAPVLFLKPTTSYVFEGTPIRLHPKIGVVHHEVELALVIDKKARKVRPENAMQFVGGYALAIDLTARDIQEEAKKQGLPWTVAKGQDYFCPISNMLSKAQIPDPDDVGIWLRVNDEPRQRSNTKHMVHRTAFLVSYISHLFTLEPGDVILTGTPEGVGPIKAGDTVTAGIEGLMQMRFAVE 223 +AA AA L++ G KI+GVG+NYA H KE+G PKAPVLFLKPT+SY+ G I + + + HEVELA+VI KKAR V AM +VGGYALA+D+TAR+IQ AK GLPWTVAKGQD F PIS +L K+ + DPD++ +WL+V+DE RQ+ +TK M+ + FL+S+IS + TL GDVILTGTP+GVGP++A +TAGI GL+ + F V+ Sbjct: 1 MAASAAASLKLLSIGTKIVGVGRNYAAHAKELGNAVPKAPVLFLKPTSSYLQNGGTIEIPHPLESLDHEVELAVVIGKKARDVAEATAMDYVGGYALALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISAVLPKSTVMDPDNLELWLKVDDELRQKGSTKDMIFKIPFLISHISSIMTLMEGDVILTGTPQGVGPVRAEQKITAGITGLIDVHFDVQ 218
BLAST of NO03G04580 vs. NCBI_GenBank
Match: XP_019159003.1 (PREDICTED: acylpyruvase FAHD1, mitochondrial-like [Ipomoea nil]) HSP 1 Score: 251.5 bits (641), Expect = 2.500e-63 Identity = 119/217 (54.84%), Postives = 157/217 (72.35%), Query Frame = 0 Query: 5 VAAVTAARSSLINHGKKIIGVGKNYALHIKEMGGQAPKAPVLFLKPTTSYVFEGTPIRLHPKIGVVHHEVELALVIDKKARKVRPENAMQFVGGYALAIDLTARDIQEEAKKQGLPWTVAKGQDYFCPISNMLSKAQIPDPDDVGIWLRVNDEPRQRSNTKHMVHRTAFLVSYISHLFTLEPGDVILTGTPEGVGPIKAGDTVTAGIEGLMQMRFAV 222 +A +A L+ G KIIGVG+N+A H KE+G PK PVLFLKPTTSY+ G I + + +HHEVELA+VI ++AR V P +AM ++GGYA+A+D+TAR+IQ AK GLPWTVAKGQD F PIS++L + +PDP DV +WL+V+ E RQ+ +T+ M+ + +LVS+IS + TL GDVILTGTPEGVGP+K G V AGI GL+ + F V Sbjct: 24 MATAASACQKLLTVGTKIIGVGRNFAAHAKELGNSIPKEPVLFLKPTTSYLQNGGTIEIPQSLETLHHEVELAVVIGQRARDVTPGSAMDYIGGYAVALDMTAREIQSAAKSAGLPWTVAKGQDTFTPISSILPCSMVPDPHDVELWLKVDGEIRQKGSTRDMIFKIPYLVSHISSIMTLAEGDVILTGTPEGVGPVKVGQKVEAGITGLLDVHFNV 240
BLAST of NO03G04580 vs. NCBI_GenBank
Match: XP_003529558.1 (PREDICTED: acylpyruvase FAHD1, mitochondrial [Glycine max] >KHN02950.1 Acylpyruvase FAHD1, mitochondrial [Glycine soja] >KRH50814.1 hypothetical protein GLYMA_07G245900 [Glycine max]) HSP 1 Score: 251.1 bits (640), Expect = 3.200e-63 Identity = 118/213 (55.40%), Postives = 156/213 (73.24%), Query Frame = 0 Query: 10 AARSSLINHGKKIIGVGKNYALHIKEMGGQAPKAPVLFLKPTTSYVFEGTPIRLHPKIGVVHHEVELALVIDKKARKVRPENAMQFVGGYALAIDLTARDIQEEAKKQGLPWTVAKGQDYFCPISNMLSKAQIPDPDDVGIWLRVNDEPRQRSNTKHMVHRTAFLVSYISHLFTLEPGDVILTGTPEGVGPIKAGDTVTAGIEGLMQMRFAVE 223 A L+ KI+ VG+NYA H KE+G PK PVLFLKPT+SY+ G I++ G +HHEVELA+VI KKAR V +AM +V GYALA+D+TARD+Q AK GLPW++AKGQD F PIS++L K +P+PDD+ +WL+V++E RQ+ +TK M+ + FL+SYIS + TL GDVILTGTP GVGP+K G T+TAG+ GL+ ++F VE Sbjct: 4 AGCQKLLELSTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLKNGGTIQIPHNEGSLHHEVELAVVIAKKARDVSESSAMDYVAGYALALDMTARDLQAAAKSAGLPWSLAKGQDTFTPISSILPKTAVPNPDDLELWLKVDEEIRQKGSTKDMIFKIPFLISYISSVMTLFEGDVILTGTPPGVGPVKEGQTITAGVTGLVDVQFNVE 216
BLAST of NO03G04580 vs. NCBI_GenBank
Match: ETK96538.1 (hypothetical protein L915_00772 [Phytophthora parasitica]) HSP 1 Score: 250.8 bits (639), Expect = 4.200e-63 Identity = 119/208 (57.21%), Postives = 149/208 (71.63%), Query Frame = 0 Query: 16 INHGKKIIGVGKNYALHIKEMGG-QAPKAPVLFLKPTTSYVFEGTPIRLHPKIGVVHHEVELALVIDKKARKVRPENAMQFVGGYALAIDLTARDIQEEAKKQGLPWTVAKGQDYFCPISNMLSKAQIPDPDDVGIWLRVNDEPRQRSNTKHMVHRTAFLVSYISHLFTLEPGDVILTGTPEGVGPIKAGDTVTAGIEGLMQMRFAVE 223 ++ GKKII +GKNY H +EMG APK PVLFLKPTTSYV G + L P IG VHHEVEL +VI K + + +M V GYALAID+TARD+Q +AKK GLPWT AKG D F PIS+ + K+ +P P D+ +WL+V+DE RQ NT MVH FL+SY+S + TLE GD+++TGTPEGVGP+ G +TAGI GL+ +RF VE Sbjct: 8 VDFGKKIIAIGKNYEAHAREMGATSAPKDPVLFLKPTTSYVRNGGSVLLPPGIGEVHHEVELGVVIGKGGKDIAESASMDHVAGYALAIDMTARDLQAKAKKAGLPWTHAKGLDTFTPISDFIPKSVVPSPHDLNLWLKVDDELRQNGNTGDMVHNIPFLISYVSRIMTLEEGDLLITGTPEGVGPVPVGSVLTAGITGLIDVRFPVE 215 The following BLAST results are available for this feature:
BLAST of NO03G04580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G04580 ID=NO03G04580|Name=NO03G04580|organism=Nannochloropsis oceanica|type=gene|length=1324bpback to top protein sequence of NO03G04580.1 >NO03G04580.1-protein ID=NO03G04580.1-protein|Name=NO03G04580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=228bpback to top Synonyms
Publications
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