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Properties
| Property Name | Value |
|---|
| Description | Prefoldin |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr3 | genome | chr3:1156123..1159818 - |
Analyses
This gene is derived from or has results from the following analyses
Homology
BLAST of NO03G03960 vs. NCBI_GenBank
Match: EWM29803.1 (Prefoldin [Nannochloropsis gaditana]) HSP 1 Score: 230.3 bits (586), Expect = 2.800e-56 Identity = 172/381 (45.14%), Postives = 226/381 (59.32%), Query Frame = 0
Query: 724 QVETNEGEVRRLEERLLEEERRHAETLADKDVEIGRLREEQITRLSSTARRSEEMENQLKAVEAETAAHKQKRLAAKNEMISLAQALEDLTTTSRLMEESMEHTLIPRCLEQLSLLDRAIDQVDAAAWQLARRGPGGGGGEHSSLSLTRTMGADGRTQSRILGVEMGRLNT----------GVGGRRXXXXXXXXXXXGLARARSPSGDRLLRKE-EDEEEDKIDHDAQLLSGRDKGIDAGSGAGGGRDHRAQTKSMLTMERLARLDIETGRVSAGVQMLAHSLERMQRALEALTEEGFETHSSAHDVVSLCSKVLGECFSFMRQTTA-VNVAATVATGAASSSSPSYRGQRSARMPYEAVLREEEENKEEGEEDRVIDVV 1093
Q + +E E++ +E+RL E +R +E + +KD E+ RL EEQ RLSSTAR+SEEME LKAVEAETAAHKQKRLAAKNEMISLAQALE TTTSR+++ES+EHTL+PRCLE LS L +A + VD A WQL R G +S + R G++ ++ VEMGRL G GR + + SPS LL E EDE +D D Q S A DHRA ++S MERL RLD+E+ +VSA ++L SLER+ L+ TE+G + S +++ +SLCSK+L ECFS++R T+A + V+ T + ++ + R R AR PY AVL EEG +DRVID V
Sbjct: 645 QAKAHESEIQHMEQRLRELDRCTSEQIMEKDAELARLIEEQAVRLSSTARQSEEMEIHLKAVEAETAAHKQKRLAAKNEMISLAQALEAATTTSRMVDESIEHTLVPRCLEHLSSLAKATELVDMALWQLKRHDRVAGSSTSTSSWVARRR---GQSSDQLPSVEMGRLPAPGVRHQDMAGGAAGRE-------ERNQSMDGSGSPSVHHLLADEGEDESAHALDSDFQ---------HKASQAQWESDHRAHSRSTAAMERLQRLDVESAQVSAEFKVLTQSLERLLWELDHSTEDGSD-DSRSNNYISLCSKILRECFSYVRHTSAGLAVSNTASNRRTGTTIAASRALRPARQPY-AVL-----GSEEGLDDRVIDSV 999
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G03960 ID=NO03G03960|Name=NO03G03960|organism=Nannochloropsis oceanica|type=gene|length=3696bp
CCACAGCTCCCACAGGCACGGGAGGACAATCACCAGAAAGCCGCGGAAAC
AAGACGCCGTGAGCAAGAACGGCGCAGTTTTCAGCATCGTCCAGTCCACC
TTGCAGCCATGGCATCATCCTCCCAGCAATCGCCCTCCGAGGTAATTGCC
TTGCTTCAAGCCGCGGTCAAGGATAAGGATGCAACGCTTGCCCAACTTAA
GACCAAGACCAAGATTTTTGTGCAGGAGATGCGAGGGGAGCTGAACCAAG
CGAAAGCGGGCAAAGAGGCGGCGGAGCAAAAATGTGCGACGTTGAAAGCG
CAGCTCCAGAGGGTACAACCCTCGCAGCAGCAACAGCAGCAGCAGCAGCA
GCACCCGGGGGAGGAGGGTTCGGAGGGCAATATGAGCAGCAGTAGTAGCA
GCAGCAGCAGCAGCAAAAACAACTGTAGTGAGAAGGTCGAGGTCCTCCAA
ATCCAGAAGCTGCAAGCCCAGTTGAGCAAGGCCCAAGCTACTGTCAAACA
AACCCAAGAAGAGATGGCCATACACAAGCAGCAAAGTCACGCGCTCATGT
CACAGCTTGCCGAAGCCCAAAGGCATCAGAAGGACGCCGAAGCCTTGGGA
CTACGCGTGGATAACCTGCAGGAGGAAGTCAAGATGGCAAAGGAACAGCA
TAGGACGGCCTTAAATGAGCTCGCTGAGAAGGAGAAGGAAGTGTTGGGCC
TTGACAAACTATTGAAGGAAACCATGGCGGCAGCGGCAGAAGCAGCGAAT
GCATCGATAGCAACAGCAGCGGTCCACGAGAAGGAGCAGCAAGCTCAGTC
AAAGAGGCTGCAGGAGGTCCAGCAACAATTGGAGGAGGAGCAGCAGCGAT
TCGAGCAGCAGAAGCAGCGTTTGGAGAAGCAGTATTTGCAAATGCAGCAA
CAACAGCAGCAGCTGCTGCAAATTCAGCAGGCACGACAGGAGACAGTACA
ATCACAGGCGCCTCCTCCTGCATCCAGTCACCCAACACCATCCCTTTCCC
CCCAGCAAGACGAAGAATTCGAGGGAGATCTGATCGATTTTGACGTCACA
GACCGCGTCTCCCCGCTTCGTCCCCTATCTGCGCACAGGACCACAACCCT
TAAGAGAAGCAACATCACAAACACCATCTTGCCTACAACGGCGTCTTTTA
TCGCTGGTGCCGACTGCCCAGTCTCTACCGTGGCACCAACACCAGAAGCG
GTAGCACCAGCGGCAGCCGACCAAGACACAATTTCTCACTTTGGAGGTGG
ATCGCACGAGGTTCTTGCCTATCCTCAGGCCAATGAGGAAGAGCTTGCAG
CAGCTCGCGCGGACGTCGCCCGTTTGCTCCAGAGTCATGAAGCAGATAAG
GCGGCCCTTGATCAATTGCGGCTGGAGTTGACTGCTGCAAAAGAAGAAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAG
CAGTATCAACTTCCATCAAAAAGGGGGAAGAAACTGATAATCAAGAAGAG
AGAGGGCTGGAGGGATTGGATGGACCGACGCAACACCTGAAGGCGCAGTT
GCTGGAACGCGAGCTCACAGTGAAGGAGAAAAGCATCCTCCTTGAGCGGT
ACCAGATCGCGCTGGCGACGCTTACCAGTGAGCGCGATTCGTTGCAGCAA
CAGGTTGGGGCCCTGCTTGTGGAGAAGGAGGGATTGGTAGCAGCGGTGGA
AAAGCTGACGACAAGCAGCAGCACACTAGAGGCAAGTCGAGAGGAGGTTG
TGAGGGAAGGGAAGGAGCTGAAGGAGGAATGTGCGAAGGTGAAGGCGGAT
CTGATGGTGTTGGAAAAAGCGCAACGGACACACGACGATCAAATACGGAG
CATCCGACACGAGGCAGAGGAGACGGTGAAACGAGTGAAATCCGATGCTG
AGACGGAATTACGAACTGCTCGCTTCTCCCTGCAAGAAGCTGAGAAAGCT
CAAGGACAAGCGGAGAAAACTGCAGCGAATTTAAGGGCCCAAATGGAGGG
ATTACATCGGTCTTTGACTCAAGGTACAGAGGAGAATAGAGAGACGGTGG
CCGCTCTGGAGAAGGAGCGAGGGCAGCTTACGGCTGAATTGGAGTTGGAA
AGGGAAAACGGACAGGAACGCCGGAGGCAAATGAAGCAGTACCTCGAGAC
ACTTACGAAGGAAAAGCAAGAGAGGGAGGCGGAGCTAGCAGTGTCGACCA
CGGCTCTGGCAGCCGCTAGGCGAGAGCAGGGAGAGTTGGAGGAAATGGTG
CAGGCGTTGCAGGAACGGTTGGCGATACAGGTGGAGACGAACGAAGGGGA
AGTTCGTCGGTTGGAGGAGCGACTACTGGAGGAGGAAAGGAGGCATGCGG
AGACCTTGGCGGACAAGGATGTGGAGATTGGACGATTGAGAGAGGAGCAG
ATCACTCGACTATCGAGTACGGCACGGCGGTCGGAGGAGATGGAGAATCA
GCTGAAGGCAGTGGAGGCTGAGACGGCCGCACATAAGCAGAAGAGACTCG
CGGCGAAAAATGAGATGATTTCATTGGCCCAGGCCTTGGAGGATTTGACG
ACGACATCAAGGTTAATGGAGGAGAGTATGGAACATACGTTGATTCCAAG
ATGCCTTGAACAGCTCTCATTGCTTGACAGGGCGATTGATCAGGTGGACG
CGGCGGCGTGGCAGTTGGCGAGGAGAGGTCCTGGAGGAGGAGGGGGGGAA
CATTCGTCTTTATCCTTAACAAGAACAATGGGGGCGGATGGCCGAACACA
GAGTCGTATTTTAGGGGTCGAGATGGGGCGTCTTAATACTGGAGTCGGTG
GACGTAGAGGAGGCCGTGGGAATGGAGGTGGGAGCAAAAGGGGTCTTGCT
CGCGCGCGTAGTCCGTCCGGGGATCGTTTACTGCGAAAGGAGGAAGATGA
AGAGGAGGACAAAATTGATCATGACGCGCAGCTCTTGTCGGGAAGAGATA
AGGGTATTGATGCTGGAAGTGGTGCGGGAGGAGGCCGTGACCATCGTGCT
CAGACCAAGTCCATGCTGACGATGGAGCGCCTAGCAAGGTTGGATATAGA
GACAGGACGAGTCTCGGCGGGTGTGCAAATGTTGGCGCACAGCTTGGAGC
GGATGCAACGGGCGCTGGAGGCATTGACAGAGGAAGGATTTGAGACCCAT
AGCAGCGCACATGATGTGGTGTCTTTGTGTAGCAAGGTGTTGGGGGAGTG
TTTCTCGTTCATGCGGCAGACGACCGCGGTGAACGTGGCCGCGACTGTTG
CGACCGGGGCGGCTTCTTCTTCATCGCCGTCATATAGGGGACAAAGATCT
GCCCGCATGCCTTATGAGGCCGTACTGCGAGAGGAGGAGGAGAATAAGGA
GGAGGGGGAGGAGGATCGCGTGATTGACGTGGTTTAGAGGGGATAGATAG
GAAGGCAGGAGAAAGTCTTCGAATAGATATATGACAATGCGGTGTGTGCA
TTTGCACACACGAAATATATAGAGCATAAATGATTGATTCGCCGAAGTTG
ACCGACACTGTGCCGTTCTGAGCATGACACCCCCATGTTCTGCACTTCAA
ACTTCTCGGGGCTTGTACGGCACTGACACATGTATGACCGTCGCCGACCA
CAACAATTTGTAGAAAAATCAATATTCTCCTACCTGGCCCACCAGCACCG
TATTTCTTAATGGAAAGGGAAAAAGAAGCAATCTTTACAGCGATAA back to topprotein sequence of NO03G03960.1 >NO03G03960.1-protein ID=NO03G03960.1-protein|Name=NO03G03960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1093bp
MASSSQQSPSEVIALLQAAVKDKDATLAQLKTKTKIFVQEMRGELNQAKA
GKEAAEQKCATLKAQLQRVQPSQQQQQQQQQHPGEEGSEGNMSSSSSSSS
SSKNNCSEKVEVLQIQKLQAQLSKAQATVKQTQEEMAIHKQQSHALMSQL
AEAQRHQKDAEALGLRVDNLQEEVKMAKEQHRTALNELAEKEKEVLGLDK
LLKETMAAAAEAANASIATAAVHEKEQQAQSKRLQEVQQQLEEEQQRFEQ
QKQRLEKQYLQMQQQQQQLLQIQQARQETVQSQAPPPASSHPTPSLSPQQ
DEEFEGDLIDFDVTDRVSPLRPLSAHRTTTLKRSNITNTILPTTASFIAG
ADCPVSTVAPTPEAVAPAAADQDTISHFGGGSHEVLAYPQANEEELAAAR
ADVARLLQSHEADKAALDQLRLELTAAKEEAAAAAAAAAAAAAATTTAVS
TSIKKGEETDNQEERGLEGLDGPTQHLKAQLLERELTVKEKSILLERYQI
ALATLTSERDSLQQQVGALLVEKEGLVAAVEKLTTSSSTLEASREEVVRE
GKELKEECAKVKADLMVLEKAQRTHDDQIRSIRHEAEETVKRVKSDAETE
LRTARFSLQEAEKAQGQAEKTAANLRAQMEGLHRSLTQGTEENRETVAAL
EKERGQLTAELELERENGQERRRQMKQYLETLTKEKQEREAELAVSTTAL
AAARREQGELEEMVQALQERLAIQVETNEGEVRRLEERLLEEERRHAETL
ADKDVEIGRLREEQITRLSSTARRSEEMENQLKAVEAETAAHKQKRLAAK
NEMISLAQALEDLTTTSRLMEESMEHTLIPRCLEQLSLLDRAIDQVDAAA
WQLARRGPGGGGGEHSSLSLTRTMGADGRTQSRILGVEMGRLNTGVGGRR
GGRGNGGGSKRGLARARSPSGDRLLRKEEDEEEDKIDHDAQLLSGRDKGI
DAGSGAGGGRDHRAQTKSMLTMERLARLDIETGRVSAGVQMLAHSLERMQ
RALEALTEEGFETHSSAHDVVSLCSKVLGECFSFMRQTTAVNVAATVATG
AASSSSPSYRGQRSARMPYEAVLREEEENKEEGEEDRVIDVV* back to top
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