NO03G03880, NO03G03880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G03880 vs. NCBI_GenBank
Match: ETK78897.1 (hypothetical protein L915_15205, partial [Phytophthora parasitica] >ETL32344.1 hypothetical protein L916_15097, partial [Phytophthora parasitica] >ETM38737.1 hypothetical protein L914_15064, partial [Phytophthora parasitica] >ETP08604.1 hypothetical protein F441_15482, partial [Phytophthora parasitica CJ01A1] >ETP36645.1 hypothetical protein F442_15503, partial [Phytophthora parasitica P10297]) HSP 1 Score: 252.3 bits (643), Expect = 3.700e-63 Identity = 129/283 (45.58%), Postives = 180/283 (63.60%), Query Frame = 0 Query: 49 VLLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRR----SLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPL---HPFSL 325 V+LP L SPS + +ER HR FGCELIQEAG+LLR PQVVMATAQTL RF+YR++ FDAF A+ C+FLA+K+EEKP+ +DV+ VF+ M RRR+ ++ L+++ + + R L+ +E+ VL +LGF Y+V +HPHK++LYY+K L GS LAQ+AW Y+NDSLR D CVRY+A++IACAA+F+A+R + LP++PPWY LF T++ V I+ LY Q+ ++WLEPL +PF + Sbjct: 10 VVLPASSLARSPSLEDDIKPDIERLHRSFGCELIQEAGVLLRLPQVVMATAQTLLQRFYYRKSLRQ-------------------FDAFRVAVSCLFLAAKVEEKPKRIKDVVGVFYAMFRRRKWQRSTVSQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSVTEHPHKYVLYYVKVLDGSSALAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYLLFDVDKTQLYAVSVVIMELYKQE-------KIQWLEPLTETNPFEV 266
BLAST of NO03G03880 vs. NCBI_GenBank
Match: CCI39886.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 245.7 bits (626), Expect = 3.500e-61 Identity = 124/274 (45.26%), Postives = 173/274 (63.14%), Query Frame = 0 Query: 50 LLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRR----SLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPL 320 LLP EILR PSQR G+ VE+ HR +GCELIQEAG LL+ PQVVM TAQT+ HRF+YR++ FDAF + C+FLA+K++E P +++ V++ M +RRR S+ LL++ S Y R+ ++ +E+ +L +LGF YNVM+H HK++LYYIK L GS ELAQ+AW Y+NDSLR+D R+ A I CA++F+A R L+IKLPD+PPW+ LF S E+ + I+ LY + ++WL+PL Sbjct: 13 LLPEEILRNPPSQRDGISAQVEKDHRFWGCELIQEAGTLLKLPQVVMVTAQTILHRFYYRKSLRD-------------------FDAFRVSFACLFLAAKVDEAPTRISEILTVYYAMYKRRRWKETSIENQLLDLDSDTYLQWRDWMILLERQLLIDLGFSIYNVMEHAHKYVLYYIKILDGSTELAQKAWGYVNDSLRIDLMTRFSAAAIGCASIFLAGRVLQIKLPDNPPWWLLFEVSQEEMVTIAQEIIQLY-------KRNVVQWLDPL 260
BLAST of NO03G03880 vs. NCBI_GenBank
Match: CCA19176.1 (cyclinL1 putative [Albugo laibachii Nc14]) HSP 1 Score: 242.3 bits (617), Expect = 3.900e-60 Identity = 124/274 (45.26%), Postives = 168/274 (61.31%), Query Frame = 0 Query: 50 LLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRR----SLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGPLRWLEPL 320 LLP EILR PSQR G+ VER HR +GCELIQEAG LL+ PQVVM TAQT+ HRF+YR++ FDAF + C+FLA+K+EE P +++ VF+ + +RRR ++ LL++ Y R+ ++ +E+ +L +LGF YNVM+H HK++LYYIK L G+ ELAQ+AW Y NDSLR+D R+ A I C +LF+A R L+IKLPD+PPW+ LF S E+ + IL LY + WL+PL Sbjct: 13 LLPEEILRNPPSQRDGISSQVERDHRFWGCELIQEAGTLLKLPQVVMVTAQTILHRFYYRKSLRD-------------------FDAFRVSFACLFLAAKVEEVPTRISEILTVFYAIYKRRRWKETNIENQLLDLDGDTYCQWRDWMILLERQLLIDLGFSIYNVMEHAHKYVLYYIKILDGTKELAQKAWGYANDSLRVDLMTRFSAAAIGCGSLFLAGRVLQIKLPDNPPWWLLFEVSQEEMVTIAREILQLY-------TRNAIEWLDPL 260
BLAST of NO03G03880 vs. NCBI_GenBank
Match: XP_009039415.1 (hypothetical protein AURANDRAFT_12696, partial [Aureococcus anophagefferens] >EGB05871.1 hypothetical protein AURANDRAFT_12696, partial [Aureococcus anophagefferens]) HSP 1 Score: 233.0 bits (593), Expect = 2.300e-57 Identity = 123/254 (48.43%), Postives = 165/254 (64.96%), Query Frame = 0 Query: 50 LLPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRRSLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSP--PWYGLFGASLTEIREVGNAILSLY 302 LLP ++L SPS+R GV A E R++GCELIQEAGILLR PQVVM T Q +F RF+YR + FDAF +AMGC FLA K+EEKP+ R+ + VFH + R R+ + LE+ RY+ + L+ +E+++LKELGF FY ++DH HKFIL+Y+K L ELAQ AW+YLND LR D +RYR+E++ACAA++MAAR L+ KLPD P PW+ +F ++ V A+L+LY Sbjct: 2 LLPADMLENSPSKRDGVSAADEYAQRVWGCELIQEAGILLRLPQVVMCTGQNIFQRFYYRVSLKR-------------------FDAFLSAMGCFFLACKIEEKPKRLRECLMVFHFV-YRVRTKSSATLELGGVRYNGWKHELVKVERHILKELGFSFY-IIDHSHKFILFYVKLLDCDGELAQEAWSYLNDCLRTDAALRYRSEVLACAAIYMAARRLQHKLPDDPAAPWWEVFRVGKADLDAVVAAVLALY 234
BLAST of NO03G03880 vs. NCBI_GenBank
Match: NP_001149537.1 (uncharacterized protein LOC100283163 [Zea mays] >ACG35766.1 cyclin-L2 [Zea mays]) HSP 1 Score: 227.6 bits (579), Expect = 9.900e-56 Identity = 117/251 (46.61%), Postives = 157/251 (62.55%), Query Frame = 0 Query: 51 LPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRRSLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLY 302 L E LR+SPS++ G+ EA E R++GC+LIQE+GILLR PQ VMATAQ LFHRF+ +++F F A A CV+LA KLEE PR R +IFVFH M RR +LP L+V S +Y +LR L+ E+++LKE+GF + ++HPHKFI Y+ TL PEL Q AWN NDSLR CVR+++E++AC ++ AAR R+ LP+ PPW+ +F A I+EV + LY Sbjct: 11 LTDEQLRDSPSRKDGIDEATETALRVYGCDLIQESGILLRLPQAVMATAQVLFHRFYCKKSFVR-------------------FSAKRVAASCVWLAGKLEESPRKSRHIIFVFHRMECRRENLPIEFLDVFSKKYSELRHDLIRTERHLLKEMGFICH--VEHPHKFISNYLATLEAPPELTQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRHRVPLPEDPPWWTVFDADEAGIQEVCRVLAHLY 240
BLAST of NO03G03880 vs. NCBI_GenBank
Match: XP_008643870.1 (uncharacterized LOC100382239 isoform X1 [Zea mays]) HSP 1 Score: 226.1 bits (575), Expect = 2.900e-55 Identity = 116/251 (46.22%), Postives = 157/251 (62.55%), Query Frame = 0 Query: 51 LPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRRSLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLY 302 L E LR SPS++ G+ EA E R++GC+LIQE+GILLR PQ VMATAQ LFHRF+ +++F F A A CV+LA KLEE PR + +IFVFH M RR +LP L+V S +Y +LR L+ E+++LKE+GF + ++HPHKFI Y+ TL PEL Q AWN NDSLR CVR+++E++AC ++ AAR R+ LP+ PPW+ +F A I+EV + + LY Sbjct: 11 LTEEQLRNSPSRKDGIDEATETVLRVYGCDLIQESGILLRLPQAVMATAQVLFHRFYCKKSFVR-------------------FSAKRVAASCVWLAGKLEESPRKSKHIIFVFHRMECRRENLPIEFLDVFSKKYSELRRDLIRTERHLLKEMGFICH--VEHPHKFISNYLATLEAPPELTQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRHRVPLPEDPPWWTVFDADEAGIQEVCSVLAHLY 240
BLAST of NO03G03880 vs. NCBI_GenBank
Match: NP_001168464.1 (uncharacterized LOC100382239 [Zea mays] >ACN28306.1 unknown [Zea mays]) HSP 1 Score: 226.1 bits (575), Expect = 2.900e-55 Identity = 116/251 (46.22%), Postives = 157/251 (62.55%), Query Frame = 0 Query: 51 LPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRRSLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLY 302 L E LR SPS++ G+ EA E R++GC+LIQE+GILLR PQ VMATAQ LFHRF+ +++F F A A CV+LA KLEE PR + +IFVFH M RR +LP L+V S +Y +LR L+ E+++LKE+GF + ++HPHKFI Y+ TL PEL Q AWN NDSLR CVR+++E++AC ++ AAR R+ LP+ PPW+ +F A I+EV + + LY Sbjct: 11 LTEEQLRNSPSRKDGIDEATETVLRVYGCDLIQESGILLRLPQAVMATAQVLFHRFYCKKSFVR-------------------FSAKRVAASCVWLAGKLEESPRKSKHIIFVFHRMECRRENLPIEFLDVFSKKYSELRRDLIRTERHLLKEMGFICH--VEHPHKFISNYLATLEAPPELTQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRHRVPLPEDPPWWTVFDADEAGIQEVCSVLAHLY 240
BLAST of NO03G03880 vs. NCBI_GenBank
Match: XP_008643875.1 (uncharacterized LOC100382239 isoform X2 [Zea mays]) HSP 1 Score: 226.1 bits (575), Expect = 2.900e-55 Identity = 116/251 (46.22%), Postives = 157/251 (62.55%), Query Frame = 0 Query: 51 LPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRRSLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLY 302 L E LR SPS++ G+ EA E R++GC+LIQE+GILLR PQ VMATAQ LFHRF+ +++F F A A CV+LA KLEE PR + +IFVFH M RR +LP L+V S +Y +LR L+ E+++LKE+GF + ++HPHKFI Y+ TL PEL Q AWN NDSLR CVR+++E++AC ++ AAR R+ LP+ PPW+ +F A I+EV + + LY Sbjct: 11 LTEEQLRNSPSRKDGIDEATETVLRVYGCDLIQESGILLRLPQAVMATAQVLFHRFYCKKSFVR-------------------FSAKRVAASCVWLAGKLEESPRKSKHIIFVFHRMECRRENLPIEFLDVFSKKYSELRRDLIRTERHLLKEMGFICH--VEHPHKFISNYLATLEAPPELTQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRHRVPLPEDPPWWTVFDADEAGIQEVCSVLAHLY 240
BLAST of NO03G03880 vs. NCBI_GenBank
Match: XP_021315357.1 (cyclin-L1-1 [Sorghum bicolor]) HSP 1 Score: 225.3 bits (573), Expect = 4.900e-55 Identity = 115/251 (45.82%), Postives = 157/251 (62.55%), Query Frame = 0 Query: 51 LPREILRESPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRRSLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLY 302 L E LR+SPS++ G+ EA E R++GC+LIQE+GILL+ PQ VMATAQ LFHRF+ +++F F A A CV+LA KLEE PR + +IFVFH M RR +LP L+V S +Y +LR L+ E+++LKE+GF + ++HPHKFI Y+ TL PEL Q AWN NDSLR CVR+++E++AC ++ AAR R+ LP+ PPW+ +F A I+EV + LY Sbjct: 11 LTDEQLRDSPSRKDGIDEATETALRVYGCDLIQESGILLKLPQAVMATAQVLFHRFYCKKSFVR-------------------FSAKRVAASCVWLAGKLEESPRRSKHIIFVFHRMECRRENLPIEFLDVFSKKYSELRHDLIRTERHLLKEMGFICH--VEHPHKFISNYLATLEAPPELTQEAWNLANDSLRTTLCVRFKSEVVACGVVYAAARRHRVPLPEDPPWWTVFDADEAGIQEVCKVLAHLY 240
BLAST of NO03G03880 vs. NCBI_GenBank
Match: OQR96510.1 (cyclin-L1 [Achlya hypogyna]) HSP 1 Score: 223.8 bits (569), Expect = 1.400e-54 Identity = 124/276 (44.93%), Postives = 169/276 (61.23%), Query Frame = 0 Query: 59 SPSQRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRAFTSETAQTPPVLTPGKAPRAFLFDAFTAAMGCVFLASKLEEKPRAPRDVIFVFHHMCRRRRSLPPSLLEVTSSRYHDLREALLTIEKYVLKELGFGFYNVMDHPHKFILYYIKTLGGSPELAQRAWNYLNDSLRLDCCVRYRAELIACAALFMAARDLRIKLPDSPPWYGLFGASLTEIREVGNAILSLYHQQDEEGEEGP-LRWLEPL---HPFSLVGMEAL 331 +PS+ GV A E+RHR F CELIQEAGILL PQVV+ATAQ+L HRF+ ++ T FDAF AMGC+FLA+K EE+PR +DVI VF M RR L +LL ++ R+ + ++ +E+ +L E+GF + +HPHKF+LYY+K L GS LAQ+AWNY+NDS R+D C+RY A +IACAA+ +AAR L + LPD W L G + ++ V +L+L E P +RW+EPL P+ +V E+L Sbjct: 3 TPSEAEGVGAADEKRHRFFACELIQEAGILLSLPQVVLATAQSLLHRFYAGQSVTD-------------------FDAFRVAMGCIFLAAKAEEQPRRIKDVIQVFFRMRNRRMGLNLTLLMPSNPRFSQWSDWIIMVERQLLIEVGFSIDTMTEHPHKFLLYYVKILDGSNALAQKAWNYVNDSFRVDLCMRYDAHVIACAAISLAARVLGVALPDK--WDVLLGVDVDDMNMVAREMLAL--------ESFPKVRWIEPLTVIDPYEMVRGESL 249 The following BLAST results are available for this feature:
BLAST of NO03G03880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G03880 ID=NO03G03880|Name=NO03G03880|organism=Nannochloropsis oceanica|type=gene|length=2122bpback to top protein sequence of NO03G03880.1 >NO03G03880.1-protein ID=NO03G03880.1-protein|Name=NO03G03880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=593bpback to top Synonyms
Publications
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