NO03G03780, NO03G03780 (gene) Nannochloropsis oceanica

Overview
NameNO03G03780
Unique NameNO03G03780
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4738
Alignment locationchr3:1112595..1117332 -

Link to JBrowse

Properties
Property NameValue
DescriptionElongation of fatty acids protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1112595..1117332 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002076ELO_fam
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
Homology
BLAST of NO03G03780 vs. NCBI_GenBank
Match: EWM29833.1 (elongation of very long chain fatty acids protein 6 [Nannochloropsis gaditana])

HSP 1 Score: 563.1 bits (1450), Expect = 5.700e-157
Identity = 268/320 (83.75%), Postives = 292/320 (91.25%), Query Frame = 0
Query:    1 MSWFLDPAPLYETSEYVTRDPVNPVRFVQVFQSIPALEPLYTEWEKNFNVKESYRIIRDNCWVPVIAVILYLSFLVEGRNYVERRKKAGKGPVNLGRFPAIWNGFLAIFSILGALRVVPHFLFLFTHKDFKETVCEAPDTAGYGDGAAGMWVMLFTVSKVFELMDTVILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNPGLYFVAMNYTVHAVMYSYYFLMEIKLWPKWLSPIFITLMQISQMLVGVGITAAAYIFQRDPSCGVVRDLIPWCAAMYATYLYFFVEFFVERFLAASSTKAGKEEGKGGKSQLAKKDIGTA 321
            MSWFLDPAPLYETS+Y+TRDPV PVRFVQVFQ+IPALEP YTEWEK+F+V   +R IRD+ WVP++AVILYLSFLVEG+ Y+ERRKK GKGPVNLG FPA+WNGFLA+FSI GALRVVPHFLFLFTHKDFKETVCEAPD AGYGDGAAG+WVMLFTVSKVFELMDTVILVLKGK+PMFLHWYHHVTVLLYTWFSYSARNPGLYF+AMNYTVHAVMYSYYFLME++LWPKWLSP+FITLMQISQMLVGVG+TAAAY +Q DPSC VVRDLIPWCAAMYATYLYFFVEFFVERFLAAS+ +          S+LA KDIG A
Sbjct:    1 MSWFLDPAPLYETSQYITRDPVKPVRFVQVFQAIPALEPFYTEWEKHFDVSAPFRAIRDSKWVPIMAVILYLSFLVEGKKYIERRKKEGKGPVNLGYFPALWNGFLALFSIAGALRVVPHFLFLFTHKDFKETVCEAPDAAGYGDGAAGLWVMLFTVSKVFELMDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGLYFIAMNYTVHAVMYSYYFLMELRLWPKWLSPVFITLMQISQMLVGVGVTAAAYSYQADPSCAVVRDLIPWCAAMYATYLYFFVEFFVERFLAASTKRT-------PVSKLASKDIGAA 313          
BLAST of NO03G03780 vs. NCBI_GenBank
Match: EWM21810.1 (fatty-acyl elongase [Nannochloropsis gaditana])

HSP 1 Score: 469.9 bits (1208), Expect = 6.600e-129
Identity = 214/277 (77.26%), Postives = 246/277 (88.81%), Query Frame = 0
Query:    6 DPAPLYETSEYVTRDPVNPVRFVQVFQSIPALEPLYTEWEKNFNVKESYRIIRDNCWVPVIAVILYLSFLVEGRNYVERRKKAGKGPVNLGRFPAIWNGFLAIFSILGALRVVPHFLFLFTHKDFKETVCEAPDTAGYGDGAAGMWVMLFTVSKVFELMDTVILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNPGLYFVAMNYTVHAVMYSYYFLMEIKLWPKWLSPIFITLMQISQMLVGVGITAAAYIFQRDPSCGVVRDLIPWCAAMYATYLY 283
            DP PLY +S Y T DP +PVRFVQVFQS+P LEP Y EWEKNF+V  S+++IRDN  +P++A ILYLSFL+EG+ Y+ERR++ GKGP+NLG FPA WN FLA FS+LGA RVVPHFLFLFTHKDFK TVCEAPD AGYGDGAAGMWVMLFTVSK+FEL+DTVILVLKGK+PMFLHWYHHVTVLLYTWFSYSARNPG+YFVAMNY+VHA+MYSYYFLME++LWPKW +P++IT+ QI QMLVGVGIT +A+ F RDPSC +VR LIPWCAAMYATYLY
Sbjct:   12 DPRPLYASSRYKTADPESPVRFVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNEALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGMWVMLFTVSKLFELVDTVILVLKGKDPMFLHWYHHVTVLLYTWFSYSARNPGIYFVAMNYSVHALMYSYYFLMELRLWPKWFNPMWITMAQILQMLVGVGITVSAFFFSRDPSCALVRGLIPWCAAMYATYLY 288          
BLAST of NO03G03780 vs. NCBI_GenBank
Match: EWM25755.1 (fatty-acyl elongase [Nannochloropsis gaditana])

HSP 1 Score: 285.0 bits (728), Expect = 3.000e-73
Identity = 142/267 (53.18%), Postives = 187/267 (70.04%), Query Frame = 0
Query:   27 FVQVFQSIPALEPLYTEWEKNFNVKESYRIIRDNCWVPVIAVILYLSFLVEGRNYVERRKKAGKGPVNLGRFPAIWNGFLAIFSILGALRVVPHFLFLFTHKDFKETVCEAPDTAGYGDGAAGMWVMLFTVSKVFELMDTVILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNPGLYFVAMNYTVHAVMYSYYFLMEIKLWPKWLSPIFITLMQISQMLVGVGITAAAYIFQRDPS-CGVVRDLIPWCAAMYATYLYFFVEFFVERF 293
            F+Q +Q  P  EP YT  EK F+V+  Y  +  N W+PV+++ILY + ++       +R      PV      A WN  LA FSILGALR+VPH L+  T   FKETVC  P+    GDGA+G+W +LFT+SK+ EL+DT+ + LKG+ P+FLHWYHHVTVL +TW +YSAR+PG+YF+AMNYTVHAVMYSYYFLM IK  PKWL+PI+IT +QI QM+ GV IT   +I+ RDPS CGVV  ++ + + +Y +YLY F+EF V+RF
Sbjct:   37 FLQFWQLFPWSEPFYTRLEKEFDVRPWYLFVHANGWLPVVSIILYAAMVLLLPPITSKR------PVKCDTALAYWNLLLAAFSILGALRIVPHLLWFLTTHSFKETVCTPPERMN-GDGASGLWCLLFTLSKLVELVDTMFVCLKGRKPIFLHWYHHVTVLSFTWAAYSARHPGMYFIAMNYTVHAVMYSYYFLMAIKAKPKWLNPIYITFLQIFQMVAGVIITVYGFIYARDPSTCGVVPSVLYFQSVIYGSYLYLFLEFLVKRF 296          
BLAST of NO03G03780 vs. NCBI_GenBank
Match: XP_005852597.1 (fatty-acyl elongase [Nannochloropsis gaditana CCMP526] >EKU23234.1 fatty-acyl elongase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 266.2 bits (679), Expect = 1.400e-67
Identity = 119/163 (73.01%), Postives = 140/163 (85.89%), Query Frame = 0
Query:    6 DPAPLYETSEYVTRDPVNPVRFVQVFQSIPALEPLYTEWEKNFNVKESYRIIRDNCWVPVIAVILYLSFLVEGRNYVERRKKAGKGPVNLGRFPAIWNGFLAIFSILGALRVVPHFLFLFTHKDFKETVCEAPDTAGYGDGAAGMWVMLFTVSKVFELMDTVI 169
            DP PLY +S Y T DP +PVRFVQVFQS+P LEP Y EWEKNF+V  S+++IRDN  +P++A ILYLSFL+EG+ Y+ERR++ GKGP+NLG FPA WN FLA FS+LGA RVVPHFLFLFTHKDFK TVCEAPD AGYGDGAAG+WVMLFTVSK+FEL+DTV+
Sbjct:   12 DPRPLYASSRYKTADPESPVRFVQVFQSLPWLEPFYMEWEKNFDVSSSFQVIRDNQALPIVATILYLSFLIEGKKYIERRRREGKGPINLGLFPAFWNAFLAAFSVLGATRVVPHFLFLFTHKDFKTTVCEAPDKAGYGDGAAGLWVMLFTVSKLFELVDTVL 174          
BLAST of NO03G03780 vs. NCBI_GenBank
Match: EWM28304.1 (fatty-acyl [Nannochloropsis gaditana])

HSP 1 Score: 261.9 bits (668), Expect = 2.700e-66
Identity = 140/288 (48.61%), Postives = 182/288 (63.19%), Query Frame = 0
Query:   27 FVQVFQSIPALEPLYTEWEKNFNVKESYRIIRDNCWVPVIAVILYLSFLVEGRNYVERRKKAGKGPVNLGRFPAIWNGFLAIFSILGALRVVPHFLFLFTHKDFKETVCEAPDTAGYGDGAAGMWVMLFTVSKVFELMDTVILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNPGLYFVAMNYTVHAVMYSYYFLMEIKLWPKWLSPIFITLMQISQMLVGVGITAAAYI--FQRDPSCGVVRDLIPWCAAMYATYLYFFVEFFVERFLAASSTKAGKEEGKGGKSQL 313
            F Q+FQ IPA+EP Y EWEK ++    Y  ++   WVP+  VILY+  +  G+  ++ RK     P +L    A WN  L++FSI+G +RVVPH ++L   K      C AP+   YG+ A G WV  F +SK+ EL+DT  +VL+ K   FLHWYHHVTVLL+TWF Y+  NPG+ FVAMNY+VHA+MY YYFLM +++ P WL P FITLMQISQM+VGV  TAA YI   +    C V +DL+  C  MY+TYLY F EF V RF+     K     GK G S++
Sbjct:   41 FTQLFQVIPAIEPFYMEWEKKYDSSPVYEWMKSVPWVPIAGVILYVVGIFGGQALMKNRK-----PFDLKWPLAYWNLALSLFSIMGMVRVVPHLIYLTATKGLGVVACGAPEPL-YGNAAVGFWVQAFILSKLAELIDTAFIVLRKKPLQFLHWYHHVTVLLFTWFCYTHENPGIIFVAMNYSVHAIMYGYYFLMAVRVRPSWLKPQFITLMQISQMVVGVA-TAAFYIMKIRAGEECAVDQDLLVACGVMYSTYLYLFCEFAVRRFIL--GPKKETAPGKAGVSKM 319          
BLAST of NO03G03780 vs. NCBI_GenBank
Match: EWM25754.1 (fatty-acyl elongase [Nannochloropsis gaditana])

HSP 1 Score: 259.6 bits (662), Expect = 1.300e-65
Identity = 144/317 (45.43%), Postives = 201/317 (63.41%), Query Frame = 0
Query:    3 WFLDPAPLYETSE-YVTRDPVNPVRFVQVFQSIPALEPLYTEWEKNFNVKESYRIIRDNCWVPVIAVILYLSFLVEGRNYVERRKKAGKGPVNLGRFPAIWNGFLAIFSILGALRVVPHFLFLFTHKDFKETVCEAPDTAGYGDGAAGMWVMLFTVSKVFELMDTVILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNPGLYFVAMNYTVHAVMYSYYFLMEIKLWPKWLSPIFITLMQISQMLVGVGITAAAYIF-QRDPSCGVVRDLIPWCAAMYATYLYFFVEFFVERFLAASSTKAGKEEGKGGKSQLAKKDI 318
            W+  P  L  T+  Y  R+      F+Q +Q  P LE  Y  +EKNFN    +  +  N WV  I++ +Y+         +++R        NL    A WN FLA++S +GA+RVVPH L+  +   FK+TVC AP     GDGA G+WV LFT+SKV EL+D++ + LKG+ P+FLHWYHHV+VL +TW ++ A +PG+YF+AMNYTVH+VMY+YYFLM IK  PKWL+PI+IT MQI+QMLVGV I+   + +   D SC V   ++   A +YA+YLY F++F ++RF    + +AG +EGK   S  AKK+I
Sbjct:   16 WYCPPETLTATTRVYTARN--TTYSFIQFWQLYPWLENFYAPFEKNFNPLPIFEFVSGNWWVVYISLAIYMXXXXXLPMIMKKRPLK-----NLSTPLACWNLFLAVYSTIGAVRVVPHLLWFMSTHTFKQTVCTAPYYIN-GDGATGLWVTLFTLSKVAELIDSLWICLKGRRPIFLHWYHHVSVLYFTWAAHEAAHPGMYFIAMNYTVHSVMYTYYFLMAIKAKPKWLNPIYITFMQIAQMLVGVIISCFGFYYSSMDASCAVDPFVLKVSAVIYASYLYLFMQFMIKRFF-VKNARAG-QEGKVAAS--AKKNI 320          
BLAST of NO03G03780 vs. NCBI_GenBank
Match: EWM29442.1 (fatty-acyl [Nannochloropsis gaditana])

HSP 1 Score: 238.8 bits (608), Expect = 2.500e-59
Identity = 133/284 (46.83%), Postives = 168/284 (59.15%), Query Frame = 0
Query:   25 VRFVQVFQSIPALEPLYTEWEKNFNVKESYRIIRDNCW--VPVIAVILYLSFLVEGRNYVERRKKAGKGPVNLGRFPAIWNGFLAIFSILGALRVVPHFLFLFTHKDFKETVCEAPDTAGYGDGAAGMWVMLFTVSKVFELMDTVILVLKGKNPMFLHWYHHVTVLLYTWFSYS-ARNPGLYFVAMNYTVHAVMYSYYFLMEIKLWPKWLSPIFITLMQISQMLVGVGITAAA--YIFQRDPSCGVVRDLIPWCAAMYATYLYFFVEFFVERFLAASSTKAGKE 304
            V F Q+FQ  P L P YTE+EKNF+   SY     N W  +P+    +Y   +V G   +E R K            A WN  L++FS  G LR VPH L   T   FK+T+C  P    YG+GA G+WVMLF  SKV EL+DTV +V +     FLHWYHH+TVLL+ W SY+   + GLYFVAMNY+VHAVMY+YY+L  IK WP W+ P  IT+ QISQM+VGVGI  A+  Y++     C V    +   A MY +YLY F +FFV RFL     + G+E
Sbjct:   29 VPFTQLFQHYPVLSPFYTEYEKNFHA-SSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKH-----EWKTALACWNLLLSVFSFCGMLRTVPHLLHNVTTLPFKDTICRHP-AETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRGGKPRLGEE 305          
BLAST of NO03G03780 vs. NCBI_GenBank
Match: ACV21066.1 (fatty acid elongase [Nannochloropsis oculata])

HSP 1 Score: 238.4 bits (607), Expect = 3.200e-59
Identity = 139/298 (46.64%), Postives = 178/298 (59.73%), Query Frame = 0
Query:   25 VRFVQVFQSIPALEPLYTEWEKNFNVKESYRIIRDNCWVPVIAVIL----YLSFLVEGRNYVERRKKAGKGPVNLGRFPAIWNGFLAIFSILGALRVVPHFLFLFTHKDFKETVCEAPDTAGYGDGAAGMWVMLFTVSKVFELMDTVILVLKGKNPMFLHWYHHVTVLLYTWFSYS-ARNPGLYFVAMNYTVHAVMYSYYFLMEIKLWPKWLSPIFITLMQISQMLVGVGITAAAYIF-QRDPS-CGVVRDLIPWCAAMYATYLYFFVEFFVERFLAASSTKAGKEEGKGGKSQLAKK 316
            V F Q+FQ  P L+PLYT++EKNF      +  +D  W PV+ + L     L  +V  +  V R K   K  +      A WN  L+IFS  G +R VPH L       FK+T+C  P    YG+GA GMWVMLF  SKV EL+DTV +V +     FLHWYHH+TVLL+ W SY+   + GLYFVAMNY+VHA+MY+YY+L  I  WPKW+ P  IT+ QISQM+VGVGI A+++ F   DP  C V R  +   A MY +YLY F +FFV RFL     + G+E  K     +AKK
Sbjct:   31 VPFTQLFQHYPVLDPLYTQYEKNFYASTYVKFAQDT-W-PVLPLALCGMYALMIIVGTKVMVSRPKHEWKTAL------ACWNLMLSIFSFCGMIRTVPHLLHNVATLPFKDTICRHP-AETYGEGACGMWVMLFIFSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAIMYAYYYLTAINAWPKWIPPSIITVAQISQMIVGVGICASSFYFLYTDPEHCQVKRQNVYAGALMYGSYLYLFCDFFVRRFLRGGKPRLGEE--KSAVLTMAKK 317          
BLAST of NO03G03780 vs. NCBI_GenBank
Match: XP_005855601.1 (fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU20764.1 fatty-acyl [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 238.0 bits (606), Expect = 4.200e-59
Identity = 133/284 (46.83%), Postives = 168/284 (59.15%), Query Frame = 0
Query:   25 VRFVQVFQSIPALEPLYTEWEKNFNVKESYRIIRDNCW--VPVIAVILYLSFLVEGRNYVERRKKAGKGPVNLGRFPAIWNGFLAIFSILGALRVVPHFLFLFTHKDFKETVCEAPDTAGYGDGAAGMWVMLFTVSKVFELMDTVILVLKGKNPMFLHWYHHVTVLLYTWFSYS-ARNPGLYFVAMNYTVHAVMYSYYFLMEIKLWPKWLSPIFITLMQISQMLVGVGITAAA--YIFQRDPSCGVVRDLIPWCAAMYATYLYFFVEFFVERFLAASSTKAGKE 304
            V F Q+FQ  P L P YTE+EKNF+   SY     N W  +P+    +Y   +V G   +E R K            A WN  L++FS  G LR VPH L   T   FK+T+C  P    YG+GA G+WVMLF  SKV EL+DTV +V +     FLHWYHH+TVLL+ W SY+   + GLYFVAMNY+VHAVMY+YY+L  IK WP W+ P  IT+ QISQM+VGVGI  A+  Y++     C V    +   A MY +YLY F +FFV RFL     + G+E
Sbjct:   29 VPFTQLFQHYPVLSPFYTEYEKNFHA-SSYVNFAQNTWPALPLALCGIYGLMIVVGTKVMESRPKH-----EWKTALACWNLLLSVFSFCGMLRTVPHLLQNVTTLPFKDTICRHP-AETYGEGACGLWVMLFIYSKVPELVDTVFIVFRKSKLQFLHWYHHITVLLFCWHSYAVTSSTGLYFVAMNYSVHAVMYAYYYLTAIKAWPSWIPPSIITVAQISQMMVGVGICVASFYYLYTDPEHCEVKPQNVYSGALMYGSYLYLFCDFFVRRFLRGGKPRLGEE 305          
BLAST of NO03G03780 vs. NCBI_GenBank
Match: ASU87515.1 (long-chain fatty acid elongase [Nannochloropsis sp.])

HSP 1 Score: 223.4 bits (568), Expect = 1.100e-54
Identity = 118/301 (39.20%), Postives = 176/301 (58.47%), Query Frame = 0
Query:   25 VRFVQVFQSIPALEPLYTEWEKNFNVKESYRIIRDNCWVPVIAVILYLSFLVEGRNYVERRKKAGKGPVNLGRFPAIWNGFLAIFSILGALRVVPHFLFLFT---HKDFKETVCEAPDTAGYGDGAAGMWVMLFTVSKVFELMDTVILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNPGLYFVAMNYTVHAVMYSYYFLMEIKLWPKWLSPIFITLMQISQMLVGVGITAAAYIFQ---------RDPSCGVVRDLIPWCAAMYATYLYFFVEFFVERFLAASSTKAGKEEGKGGKSQLA 314
            V F  ++Q IPAL P YT +EK+F+   S+  +  + WVP++A  LY +F   G   +  RK       +L     +WN  L++ S  GA+RV  H L+L +      F++T+CE+P+ A Y D A G+W ++FTVSK+ EL+DT+ +VL+ K  +FLHWYHH TVLL +WF +    P LYF+A+NY++H VMY Y+FLM IK  P+W +P+++T+ QISQM VG+ +   +  ++             C +   +I     MY+TYL  FV+FFV+R+      K  +E    GK   A
Sbjct:   31 VPFHPIWQLIPALSPFYTSYEKHFDATASFIFLYRHTWVPLLATALYFAFCYYGPKAMRHRK-----AFDLKTILCLWNLSLSLISFAGAVRVGTHLLYLLSPWGGFSFRDTICESPE-ATYADNATGLWCVVFTVSKLLELVDTIFVVLRKKPLIFLHWYHHATVLLCSWFGHVTFTPALYFMAINYSIHGVMYMYFFLMAIKKVPQWFNPMWLTVAQISQMFVGIWVIVMSCYYKYFEGAQGEGMGKGCAIDGRMIVAICLMYSTYLVLFVKFFVQRYAGQQKRKGAREVAVVGKEDKA 325          
The following BLAST results are available for this feature:
BLAST of NO03G03780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29833.15.700e-15783.75elongation of very long chain fatty acids protein ... [more]
EWM21810.16.600e-12977.26fatty-acyl elongase [Nannochloropsis gaditana][more]
EWM25755.13.000e-7353.18fatty-acyl elongase [Nannochloropsis gaditana][more]
XP_005852597.11.400e-6773.01fatty-acyl elongase [Nannochloropsis gaditana CCMP... [more]
EWM28304.12.700e-6648.61fatty-acyl [Nannochloropsis gaditana][more]
EWM25754.11.300e-6545.43fatty-acyl elongase [Nannochloropsis gaditana][more]
EWM29442.12.500e-5946.83fatty-acyl [Nannochloropsis gaditana][more]
ACV21066.13.200e-5946.64fatty acid elongase [Nannochloropsis oculata][more]
XP_005855601.14.200e-5946.83fatty-acyl [Nannochloropsis gaditana CCMP526] >EKU... [more]
ASU87515.11.100e-5439.20long-chain fatty acid elongase [Nannochloropsis sp... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005519NSK005519Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G03780.1NO03G03780.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572755gene_1575Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100017g49gene822Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G03780.1NO03G03780.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G03780 ID=NO03G03780|Name=NO03G03780|organism=Nannochloropsis oceanica|type=gene|length=4738bp
CTATTCCCACCCTGTTGTCATTCACGTATCTACATTTCACCACCGCTCCA
TTCCTCCCTCCCTCCCTCCCTCTCATAAATCAATCAGCTCGGGCCACTTC
GTCATCACATCCTTACGACTCAATGTCTCCCCCTCCCCATCAGGCGTCCA
ACTCACGTCAACCGCTAGCACATTCTTCCCATTCTTCTCCAGCAGCGCCG
CCGCAAAGCGCTCCAACGAATTTTCAAGCGCCTCGGCTGAGCCTTGTTTC
CTGGGTAAGATCTTCTTCCCACCTATATGCCTACACGCTACCATCAACGT
CAAAACAATCAACTGCTTTCCCGCCATCGCTGCAGCAATTTCGTTCTCCT
TCACCCTCTCAGCCCCTCCCCTTTCCTGCTGCTTGCGCGCCGCCAGAGCC
GCTGCAGCGCGATCCTCCACGCTATTCTCAAAACCCCACTTCTTTCTCTC
CTTCACCGACGCCTCATTAAAAGCCCTCTCTGCAGCTGCCATGTCTTTGA
ATCTCCCACTTTGCGCCGTCGCGGCCACCCATCCCTCATACGACCTCAAC
AATTCTAAAGACACACTCGACGCCAGGCTCGCCAACCCGCTGCTCGTCGT
CGTCTCCGCTCTCTGTGCCAACCGTTGCAACGCCTGCATCAACCCGTGTT
GGTCCCTATCATACAATGCGACCTGGTATGTCACCAGGAACACATCCCCA
TCCAACCCTCCCGCCCCTCCTTCCCTTTCTCTTCTCTTGGCCAGCTCGGA
TTGTGCTATGGCCGCGCCCACAAAGCCACCGATGATTGCCACGTCTTTTT
TTTGGATGGGACGGCCGTGTACCACCACACGGTCATTGCTTATCAGGTCG
CCATCTTGTATGCGGATCTAGGTGACGTAGGAGGAGAAGGTGGAGGGGGA
GTGAGTTTATATCCGAGGGAAAAGAGAAGAGTTGGTTGACGGAAAGGCAT
GCAGGCAGAGAAATACATCAACGAGGAAAACAACTGAATATCTGCCCCTC
AAAATCGAGGTCTAACAACTATTCACGCGCGTACCTTGGGAATGGATCGA
CTAAACTCAAACGACGACCAGGGCGTAATGCTTCGTTCGATGCGCGAGTT
GGAGGGAGGGGTCGGGGGGGAGATATCCGTGGCTTTTCCCACAATCCGAC
CTGCTCCTGGTGCGGCCACAACTGCCTGGCTTGTGCACGCGAGGAAGGGA
AGGCTCAGGCCGCCGAGCACGGCAGGGAAGGTCGATGAGGGGGATCGCTC
GCCTGCTGTCACCAAGGTCATCGGCCTCATCCTCCTGCCACGACTGATGC
TACTTTCGCCGCGATGTCCTCTGCTCGGAAGTGCGTGTATTCTGGGGAAA
GTTGTGCGTGGATTCACCAAGAAACCAAGGGTGGGGGCGATGGTGGTGCT
GCAACAGACGAGGAAAGCGAGGAGGGAGGCCGGTCCCAGTCGACGATGGT
GACGAGGAAGATGGCAAGCAATTGGAATATTGCAGGCGATCGAGGACGGG
GTCATGGCTTGCTCGACTCTCAATGTTCCTATTTTGTGGAAGGAATAACA
AGGGAGGACACCCTTGAGTGCTTGGTTGTGGGAAAGTGTAAAGGCGTGAG
GATACGTACACAGAGGAGGAATGAATGCGCCAACTTGTTGCTTTCGGAGC
GAGGCCAGGGCGAGCAACGGCGGCGGGAGAAGCCGTTATATTATGTCCTG
TGCTGTCTTGTCTCCCCACCTACCTGTCTCTCCTTAACCATTCCCATCCC
TTCACACGATGCATCCGGTAAAACAAATGCAACTCGAGAGTGAGAGCACT
CTGCTGCCTGATTTTCACAAATTAAAGAGCATGCTTTGCTTCTTTCCCAA
TAATCTCTTTCTTGGGGATCTCGCTCCTTTGTTGAAGCGAGTCGGTTTCT
GTCTGCTTCCACCTTTTACGGTGAACCAGTGCCCTGCCCCGTGTCATGGC
AAGAATCCTAGCTGCCTCATGGGAATTAACATGTCATGAAAGCGCTTTGG
ATGCTGTTACGGTGACCCCGGCGCACTGCTTCACGTCCTGACACCCTGCC
CATATTCAATCCCTTCGCCACCCTTCCACCCATTCACACACGCACACAGG
CCAGGGGGAACCCACACGAGACACTATCTCGTCAGAGCAAGACATCAACC
CAGACACATATTCGCATAACTCAAAGGCCAGCGAACTGCTCCTGCAACGC
CGCAGTGCCATCCTTCAACAACCCCAAGCCAGCAAGCATGTCATGGTTTT
TGGACCCCGCCCCCCTCTACGAGACCAGCGAATATGTCACCCGTGATCCT
GTCAACCCCGTCCGCTTTGTGCAAGTGTTCCAATCTATCCCGGCACTCGA
ACCTCTCTACACCGAGTGGGAAAAGAATTTTAACGTCAAGGAGTCCTACC
GCATTATTCGAGACAACTGCTGGGTCCCTGTCATTGCCGTCATCCTATAT
CTATCCTTCCTAGTCGAAGGCAGGAACTATGTGGAGCGACGAAAGAAAGC
AGGCAAAGGACCGGTTAATCTCGGTCGATTCCCGGCAATTTGGAATGGGT
TCTTGGCCATCTTCTCGATACTTGGGGCTTTGCGCGTGGTCCCTCATTTC
CTGTTTTTGTTCACACATAAGGATTTTAAGGAGACGGTTTGTGAGGCTCC
TGATACGGCGGGGTATGGTGATGGGGCGGCAGGGATGTGGGTGATGCTGT
TTACGGTCTCGAAGGTGTTTGAGTTGATGGATACGGTGATTCTGGTGTTG
AAGGGAAAGAACCCAATGTTCTTGCACTGgtacgttggcgcggagtggcg
gacggaagaagggaaactgacgatggacaaagcgaaaggtctctgtagcg
acatcaaatccatcttcctgtcgcgcacgcatgaggtgcactcacgcgtg
cttctggcacccctctccctcctttcctccctttcttgtctctcttcacc
acagGTACCACCACGTGACAGTGCTCCTCTACACATGGTTCTCCTACTCG
GCCCGCAACCCAGGCCTATACTTTGTCGCCATGAACTACACCGTGCACGC
CGTCATGTACTCTTACTACTTCCTGATGGAGATCAAGCTCTGGCCGAAGT
GGCTCAGgtacgtccccctttcttccccccctctctccctccctccttct
cttcctcctttcctctcttccatcttctgtaccgcgcaccccgccatctc
actccttctctccatcagagtcttccttattatccacattaacgccctcc
tccctcttcctctcttccctcccccactccctcagCCCCATTTTCATCAC
CCTCATGCAAATCTCCCAAATGCTCGTCGGGGTCGGTATCACGGCCGCCG
CCTACATCTTTCAACGCGACCCTTCCTGCGGTGTTGTGCGCGACCTGATC
CCCTGGTGTGCCGCCATGTACGCCACCTACCTCTATTTCTTTGTCGAGTT
TTTCGTGGAGCGCTTCTTGGCAGCGTCGAGTACGAAGGCAGGGAAAGAGG
AAGGTAAGGGAGGGAAGAGTCAACTGGCGAAAAAGGATATTGGGACCGCG
GCCTTCTCGCTGGTGACTGCCAATGGAGCGTCGGTGATGGGGAATGGGAA
GAAGGTGGTGTGAAAGATGCATTTTGAAGGAAGAATAGGGAAGACTGGAG
CCTCGGGAGGGATGCGGTGGGAAGAGGGTGGAGTGGACACTTGCTTGTCC
AATTTGATTATTAAAAGTAGACGGTGGAGAAGAAAATGAAGGACGGACGA
GGAAGAGAAAGGGGAGATAGGTGGGGGGAAAAACAACGACTATGACCGGT
CAGCCGAGACACCCGCATGCACGCGCTCGGACTCGGTTCGGTCCGGACAC
CGCTCATCCTGTCCACTGCATGTGGGCTAGAAGTAGGAGGAGAATGGGTA
AAGAGGGACCCTTTTGATGAAACAGGAGACCCTTTTGATGAAACAGGAAG
TGCAAAGAAGACACCTTTTGTTGTATATGGAGGGAGGAGGGTGGGAGGAC
CAGAGATAGTGGATGTATTTCTAAAAAAAGATTTTAAATTTGGTTGGAAT
GGGTTGAACGAGGTGGAACGAGAAAGAGGAAGAGATTACGAATGACCATA
AATGAGGGAAATCAGAAGACGGAAGGGGAGGAAGGGAACCAAAAAGGAAA
AAAATGTGTGAGTAGTAGTAACGTAGCATGTGTAGCACAAGATACACACA
GGCGCGCGCAGCAGCAGAAGAGATAGGAGCGAAGGACAACAACAACAACA
ACAACAAAAAAAAAAGCTAGTTAGTTCTTTTTGAGTTCCTACATCTCTCT
AGAACTATCGCATGCAACCTGACGTCCTCGAGGACTTGCATACGAGGGGG
AGCCTCCCAACAATAAATTGTTGTCATCCCTTATTTCCTTGTCCGAGTTT
AACTAGCGACTTTGACAGGTTTTCTGACCTGGCAAAGTCCCCGGACGGCC
CACACAGGGCCAGGAGGAGAAGGGGAAGGAGGATAAAAGAGGAGGTCAGC
GGGAACGCTACACATAGAGTGTCCGCATATCCTGCCGCGGTTGACCAAAC
CGCAGATCATGGGGACGAGCTTCTCCACGGACCATACTCCTGTACACCCG
CAGGATGTTACGTGCCCCATTGCCGTCCCGGGACATGAACTGTTCACAGG
TGTCACACCAATACAGTCCTCGGAAACGCATCGTCTCCCTCCTCCTCCTC
CTCCTCCCCCTTCTTCTTCTTCCTCTTCCTCCTCTTCT
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protein sequence of NO03G03780.1

>NO03G03780.1-protein ID=NO03G03780.1-protein|Name=NO03G03780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=341bp
MSWFLDPAPLYETSEYVTRDPVNPVRFVQVFQSIPALEPLYTEWEKNFNV
KESYRIIRDNCWVPVIAVILYLSFLVEGRNYVERRKKAGKGPVNLGRFPA
IWNGFLAIFSILGALRVVPHFLFLFTHKDFKETVCEAPDTAGYGDGAAGM
WVMLFTVSKVFELMDTVILVLKGKNPMFLHWYHHVTVLLYTWFSYSARNP
GLYFVAMNYTVHAVMYSYYFLMEIKLWPKWLSPIFITLMQISQMLVGVGI
TAAAYIFQRDPSCGVVRDLIPWCAAMYATYLYFFVEFFVERFLAASSTKA
GKEEGKGGKSQLAKKDIGTAAFSLVTANGASVMGNGKKVV*
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Synonyms
Publications