NO03G03700, NO03G03700 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G03700 vs. NCBI_GenBank
Match: WP_101318825.1 (haloacid dehalogenase [Pseudomonas sp. 02C 26] >AUF96082.1 haloacid dehalogenase [Pseudomonas sp. 02C 26]) HSP 1 Score: 165.6 bits (418), Expect = 2.200e-37 Identity = 86/221 (38.91%), Postives = 132/221 (59.73%), Query Frame = 0 Query: 68 ICFDMDGTLTNSDNLHFETYRDTLLKMAPEYNSGKPLERAFYDAKLSGSANEIIVPTLLPHWERARMEELWLAKEALYRKRSVDISPLPGVLRILDWCDAQKVDYVLVTNAPRVDCIHTLHSLKLNERFDNSKIVIGEEVARPKPFPDAYNEGLRRLGLAAHECIAFEDSFSGLASAVAAGIPTVAVLTSRAEGEMTDKGAFMTIKDFEAPSLWEILEAGR 289 + FD+DGTLT++D LH + +R L G+ L +A +D ++SG AN + L P A+ + L KEAL+R+ + + PLPG+LR+LD+ A+ + +VTNAPR++ H L ++ L +RF +++++ +E+AR KP P Y GL RL A +AFEDS G+ +A AAGI TVA+ T++ + GA + I DF P LW ++E R Sbjct: 5 LLFDLDGTLTDTDTLHLQAFRQLL-----HEQDGRELTQAQFDEQISGQANGELFARLFPDQSPAQRQALAERKEALFRELAPKLQPLPGLLRLLDYAQAEAIGMCVVTNAPRLNAEHMLGAMGLTQRF--TQVLVADELARAKPDPLPYLTGLERLQANAEHALAFEDSLPGVTAASAAGIFTVAIATTQTAERLQQAGAQLVIDDFNDPRLWHLIEQMR 218
BLAST of NO03G03700 vs. NCBI_GenBank
Match: WP_105948087.1 (HAD family phosphatase [Pseudomonas sp. LLC-1] >PRN02550.1 haloacid dehalogenase [Pseudomonas sp. LLC-1]) HSP 1 Score: 165.6 bits (418), Expect = 2.200e-37 Identity = 86/219 (39.27%), Postives = 135/219 (61.64%), Query Frame = 0 Query: 68 ICFDMDGTLTNSDNLHFETYRDTLLKMAPEYNSGKPLERAFYDAKLSGSANEIIVPTLLPHWERARMEELWLAKEALYRKRSVDISPLPGVLRILDWCDAQKVDYVLVTNAPRVDCIHTLHSLKLNERFDNSKIVIGEEVARPKPFPDAYNEGLRRLGLAAHECIAFEDSFSGLASAVAAGIPTVAVLTSRAEGEMTDKGAFMTIKDFEAPSLWEILEA 287 + FD+DGTLT++D LH + +R L + + G+ L +A +DA++SG AN + L + + L KEAL+R S I P+PG+LR+L A+ + +VTNAPR++ H L+++ L +RF + +++ EE+ARPKP P Y GL+RLG A + +AFEDS G+A+A AGI TV V T++ + GA + + DF+ P+LW ++E+ Sbjct: 5 LLFDLDGTLTDTDTLHLQAFRQLLRE-----HDGRELSQAQFDAQVSGRANGELFAELFRDASAEQCKALADRKEALFRDMSPSIEPMPGLLRLLAHAQARSIGMCVVTNAPRLNAEHMLNAMGLGQRF--AHVLVAEELARPKPDPLPYLTGLQRLGAEAAQALAFEDSLPGVAAASGAGIFTVGVATTQTPERLLAAGARLVVNDFDDPALWALIES 216
BLAST of NO03G03700 vs. NCBI_GenBank
Match: WP_016715310.1 (MULTISPECIES: HAD family phosphatase [Pseudomonas] >KPM59212.1 haloacid dehalogenase [Pseudomonas putida] >OAH56490.1 haloacid dehalogenase [Pseudomonas monteilii]) HSP 1 Score: 165.2 bits (417), Expect = 2.900e-37 Identity = 85/219 (38.81%), Postives = 135/219 (61.64%), Query Frame = 0 Query: 68 ICFDMDGTLTNSDNLHFETYRDTLLKMAPEYNSGKPLERAFYDAKLSGSANEIIVPTLLPHWERARMEELWLAKEALYRKRSVDISPLPGVLRILDWCDAQKVDYVLVTNAPRVDCIHTLHSLKLNERFDNSKIVIGEEVARPKPFPDAYNEGLRRLGLAAHECIAFEDSFSGLASAVAAGIPTVAVLTSRAEGEMTDKGAFMTIKDFEAPSLWEILEA 287 + FD+DGTLT++D LH + +R L + + G+ L +A +DA++SG AN + L + + L KEAL+R S + P+PG+LR+L A+ + +VTNAPR++ H L+++ L +RF + +++ EE+ARPKP P Y GL+RLG A + +AFEDS G+A+A AGI TV V T++ + GA + + DF+ P+LW ++E+ Sbjct: 5 LLFDLDGTLTDTDTLHLQAFRQLLRE-----HDGRELSQAQFDAQVSGRANGELFAELFSDASAEQCKALADRKEALFRDMSPSLEPMPGLLRLLAHAQARSIGMCVVTNAPRLNAEHMLNAMGLGQRF--AHVLVAEELARPKPDPLPYLTGLQRLGAEAAQALAFEDSLPGVAAASGAGIFTVGVATTQTPERLLAAGARLVVNDFDDPALWALIES 216
BLAST of NO03G03700 vs. NCBI_GenBank
Match: WP_028613928.1 (HAD family phosphatase [Pseudomonas putida] >AJQ47275.1 haloacid dehalogenase [Pseudomonas putida S13.1.2]) HSP 1 Score: 165.2 bits (417), Expect = 2.900e-37 Identity = 85/219 (38.81%), Postives = 134/219 (61.19%), Query Frame = 0 Query: 68 ICFDMDGTLTNSDNLHFETYRDTLLKMAPEYNSGKPLERAFYDAKLSGSANEIIVPTLLPHWERARMEELWLAKEALYRKRSVDISPLPGVLRILDWCDAQKVDYVLVTNAPRVDCIHTLHSLKLNERFDNSKIVIGEEVARPKPFPDAYNEGLRRLGLAAHECIAFEDSFSGLASAVAAGIPTVAVLTSRAEGEMTDKGAFMTIKDFEAPSLWEILEA 287 + FD+DGTLT++D LH + +R L + G+ L +A +DA++SG AN + L + L KEAL+R S + P+PG+LR+L+ A + +VTNAPR++ H L+++ L ++F++ +++ EE+ARPKP P Y GLRRLG A + +AFEDS G+A+A AGI TV V T++ + + GA + + DF P+LW ++E+ Sbjct: 5 LLFDLDGTLTDTDTLHLQAFRQLLRE-----QGGRELSQAQFDAQVSGRANGELFAELFSGASVEQCRALADRKEALFRDLSPSLDPMPGLLRLLEHAKAHDIGMCVVTNAPRLNAEHMLNAMGLGQQFEH--VLVAEELARPKPDPLPYLTGLRRLGAEAGQALAFEDSLPGVAAASGAGIFTVGVATTQTPERLLEAGAKLVVNDFNDPALWALIES 216
BLAST of NO03G03700 vs. NCBI_GenBank
Match: WP_028691549.1 (MULTISPECIES: haloacid dehalogenase [Pseudomonas] >ODB39114.1 haloacid dehalogenase [Pseudomonas mosselii] >OWQ33237.1 haloacid dehalogenase [Pseudomonas sp. DrBHI1]) HSP 1 Score: 165.2 bits (417), Expect = 2.900e-37 Identity = 82/218 (37.61%), Postives = 137/218 (62.84%), Query Frame = 0 Query: 68 ICFDMDGTLTNSDNLHFETYRDTLLKMAPEYNSGKPLERAFYDAKLSGSANEIIVPTLLPHWERARMEELWLAKEALYRKRSVDISPLPGVLRILDWCDAQKVDYVLVTNAPRVDCIHTLHSLKLNERFDNSKIVIGEEVARPKPFPDAYNEGLRRLGLAAHECIAFEDSFSGLASAVAAGIPTVAVLTSRAEGEMTDKGAFMTIKDFEAPSLWEILE 286 + FD+DGTLT++D LH + +R L + G+ L + ++ ++SG AN ++ L P + A + L KEAL+R+ S ++P+PG+LR+LD + Q + +VTNAPR++ H L ++ L RF++ +++ +E+ARPKP P Y GL+RLG A + +AFEDS G+ +AV AGI TV + T++ + + GA + I+ ++ P LW+++E Sbjct: 5 LLFDLDGTLTDTDTLHLQAFRKLLFD-----HDGRELTQEQFNTQVSGRANGLLFAELFPQADAASRQALAERKEALFRELSPTLAPMPGLLRLLDHAERQGIGMCVVTNAPRLNAEHMLGAMSLGARFEH--VLVADELARPKPDPLPYLTGLQRLGAKAGQALAFEDSLPGVKAAVDAGIFTVGLATTQPAERLMEAGASLVIETYDDPRLWDLIE 215
BLAST of NO03G03700 vs. NCBI_GenBank
Match: WP_029885415.1 (MULTISPECIES: haloacid dehalogenase [Pseudomonas] >OAK63814.1 haloacid dehalogenase [Pseudomonas putida] >PPB16599.1 haloacid dehalogenase [Pseudomonas aeruginosa]) HSP 1 Score: 165.2 bits (417), Expect = 2.900e-37 Identity = 88/218 (40.37%), Postives = 134/218 (61.47%), Query Frame = 0 Query: 68 ICFDMDGTLTNSDNLHFETYRDTLLKMAPEYNSGKPLERAFYDAKLSGSANEIIVPTLLPHWERARMEELWLAKEALYRKRSVDISPLPGVLRILDWCDAQKVDYVLVTNAPRVDCIHTLHSLKLNERFDNSKIVIGEEVARPKPFPDAYNEGLRRLGLAAHECIAFEDSFSGLASAVAAGIPTVAVLTSRAEGEMTDKGAFMTIKDFEAPSLWEILE 286 + FD+DGTLT++D+LH + +R L + G+ L +A ++A++SG AN + L P + L KEAL+R+ S + P+PG+LR+L+ A + +VTNAPR++ H L ++ L +RF++ +V+ +E+ARPKP P Y GL+RLG AA + +AFEDS G+A+A AAGI TV V T++ + GA + I DF LW +LE Sbjct: 5 LLFDLDGTLTDTDSLHLQAFRQLL-----RDHDGRELSQAQFEAQVSGRANGELFAELFPGASTEQCARLADRKEALFREMSPALQPMPGLLRLLEHAQAHAMGMCVVTNAPRLNAEHMLAAMGLAQRFEH--VVVADELARPKPDPLPYLTGLQRLGAAAGQALAFEDSLPGVAAATAAGILTVGVATTQTPERLRAAGAELVIADFNDAQLWALLE 215
BLAST of NO03G03700 vs. NCBI_GenBank
Match: PVE24864.1 (hydrolase [Microvirga sp. KLBC 81]) HSP 1 Score: 165.2 bits (417), Expect = 2.900e-37 Identity = 93/222 (41.89%), Postives = 132/222 (59.46%), Query Frame = 0 Query: 65 VKGICFDMDGTLTNSDNLHFETYRDTLLKMAPEYNSGKPLERAFYDAKLSGSANEIIVPTLLPHWERARMEELWLAKEALYRKRSVDISPLPGVLRILDWCDAQKVDYVLVTNAPRVDCIHTLHSLKLNERFDNSKIVIGEEVARPKPFPDAYNEGLRRLGLAAHECIAFEDSFSGLASAVAAGIPTVAVLTSRAEGEMTDKGAFMTIKDFEAPSLWEILEA 287 +K + FDMDGTL +SD +H + + + L +PE G ++ Y + + G NE I TLLPH E KEA +R+ ++D+ PL G++ +LDW + + LVTNAPR++ H L L L ERF +I I ++VAR KP P Y L RLG+ A E +AFEDS SG+ +A AAG+ + +LT EM D GA TI+DF AP+LW++L + Sbjct: 2 LKALIFDMDGTLVHSDPVHLQAFAEVL---SPE---GVAVDEHIYRSTIIGRTNESIFATLLPHRTIEEQEAFADEKEAAFRRLALDLKPLDGLVALLDWARERGIKVALVTNAPRLNAEHMLDVLGLTERFP-VQITI-DQVARGKPDPLPYLTALERLGVRADEAVAFEDSPSGMKAAKAAGLFSFGMLTGLTAQEMRDVGADATIEDFHAPALWDVLNS 215
BLAST of NO03G03700 vs. NCBI_GenBank
Match: WP_016499560.1 (HAD family phosphatase [Pseudomonas putida] >BAN54339.1 hypothetical protein PP4_24860 [Pseudomonas putida NBRC 14164]) HSP 1 Score: 164.9 bits (416), Expect = 3.800e-37 Identity = 84/218 (38.53%), Postives = 135/218 (61.93%), Query Frame = 0 Query: 68 ICFDMDGTLTNSDNLHFETYRDTLLKMAPEYNSGKPLERAFYDAKLSGSANEIIVPTLLPHWERARMEELWLAKEALYRKRSVDISPLPGVLRILDWCDAQKVDYVLVTNAPRVDCIHTLHSLKLNERFDNSKIVIGEEVARPKPFPDAYNEGLRRLGLAAHECIAFEDSFSGLASAVAAGIPTVAVLTSRAEGEMTDKGAFMTIKDFEAPSLWEILE 286 + FD+DGTLT++D LH + +R L + + G+ L +A +DA++SG AN + L + + L KEAL+R S + P+PG+LR+L+ A + +VTNAPR++ H L+++ L ++F++ +++ EE+ARPKP P Y GL+RLG A + +AFEDS G+A+A AGI TV V T++ + + GA + + DF P+LW ++E Sbjct: 5 LLFDLDGTLTDTDTLHLQAFRQLLRE-----HDGRELSQAQFDAQVSGRANGELFAELFSGASVEQCQALADRKEALFRDLSPSLDPMPGLLRLLEHAKAHDIGMCVVTNAPRLNAEHMLNAMGLGQQFEH--VLVAEELARPKPDPLPYLTGLQRLGAEARQALAFEDSLPGVAAASGAGIFTVGVATTQTPQRLLEAGAKLVVNDFNDPALWALIE 215
BLAST of NO03G03700 vs. NCBI_GenBank
Match: WP_046787696.1 (haloacid dehalogenase [Pseudomonas putida]) HSP 1 Score: 164.9 bits (416), Expect = 3.800e-37 Identity = 84/219 (38.36%), Postives = 134/219 (61.19%), Query Frame = 0 Query: 68 ICFDMDGTLTNSDNLHFETYRDTLLKMAPEYNSGKPLERAFYDAKLSGSANEIIVPTLLPHWERARMEELWLAKEALYRKRSVDISPLPGVLRILDWCDAQKVDYVLVTNAPRVDCIHTLHSLKLNERFDNSKIVIGEEVARPKPFPDAYNEGLRRLGLAAHECIAFEDSFSGLASAVAAGIPTVAVLTSRAEGEMTDKGAFMTIKDFEAPSLWEILEA 287 + FD+DGTLT++D LH + +R L + G+ L +A +D+++SG AN + L P+ L KEAL+R+ + + P+PG+LR+L + A ++D +VTNAPR++ H L+++ L F++ +++ EE+ RPKP P Y GL+RLG A + +AFEDS G+ +A AGI TV V T++ + GA + + DF+ P LWE++EA Sbjct: 5 LLFDLDGTLTDTDTLHLQAFRQLL-----RDHDGRALTQAQFDSQISGRANGPLFAELFPNAGAHECLALADRKEALFRELAPALEPMPGLLRLLHYAQASRIDMCVVTNAPRLNAEHMLNAMGLGAHFEH--VLVAEELERPKPDPLPYLTGLQRLGATAEQALAFEDSLPGVNAASGAGIFTVGVATTQTAERLMAAGARLVVDDFDDPRLWEVIEA 216
BLAST of NO03G03700 vs. NCBI_GenBank
Match: WP_054903292.1 (haloacid dehalogenase [Pseudomonas sp. NBRC 111131]) HSP 1 Score: 164.9 bits (416), Expect = 3.800e-37 Identity = 86/219 (39.27%), Postives = 136/219 (62.10%), Query Frame = 0 Query: 68 ICFDMDGTLTNSDNLHFETYRDTLLKMAPEYNSGKPLERAFYDAKLSGSANEIIVPTLLPHWERARMEELWLAKEALYRKRSVDISPLPGVLRILDWCDAQKVDYVLVTNAPRVDCIHTLHSLKLNERFDNSKIVIGEEVARPKPFPDAYNEGLRRLGLAAHECIAFEDSFSGLASAVAAGIPTVAVLTSRAEGEMTDKGAFMTIKDFEAPSLWEILEA 287 + FD+DGTLT++D LH + +R L +Y+ G+ L +A +DA++SG AN + L P+ L KEAL+R+ + + P+PG+LR+L+ ++ + +VTNAPR++ H L ++ LN RF+ ++V+ +E+ RPKP P Y GL+RLG A E +AFEDS G+ +A AAGI TV + T++ + GA + + DF+ P LW ++EA Sbjct: 5 LLFDLDGTLTDTDTLHLQAFRQLL----RDYD-GRELTQAEFDAQVSGRANGQLFAELFPNASHQERVALADRKEALFRELAPALEPMPGLLRLLEHAQSRGIGMCVVTNAPRLNAEHMLAAMGLNTRFE--QVVVADELERPKPDPLPYLTGLQRLGAVAGEALAFEDSLPGVKAASAAGIVTVGIATTQIPERLQAAGAKLVVDDFDDPRLWRLIEA 216 The following BLAST results are available for this feature:
BLAST of NO03G03700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G03700 ID=NO03G03700|Name=NO03G03700|organism=Nannochloropsis oceanica|type=gene|length=965bpback to top protein sequence of NO03G03700.1 >NO03G03700.1-protein ID=NO03G03700.1-protein|Name=NO03G03700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=289bpback to top Synonyms
Publications
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