NO03G03660, NO03G03660 (gene) Nannochloropsis oceanica

Overview
NameNO03G03660
Unique NameNO03G03660
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1674
Alignment locationchr3:1086963..1088636 +

Link to JBrowse

Properties
Property NameValue
DescriptionFatty acid hydroxylase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1086963..1088636 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008610lipid biosynthetic process
GO:0055114oxidation-reduction process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO:0016491oxidoreductase activity
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR006694Fatty_acid_hydroxylase
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO03G03660 vs. NCBI_GenBank
Match: EWM29861.1 (Fatty acid hydroxylase [Nannochloropsis gaditana])

HSP 1 Score: 553.9 bits (1426), Expect = 3.700e-154
Identity = 265/353 (75.07%), Postives = 295/353 (83.57%), Query Frame = 0
Query:    1 MAAASRVFWNSMAALLVLAFLLGIASASSSQAPLIRKLSLLLTSSLGPERLANPHCARDPFCTFNDWVNAFFFSDSTKAGTIERLGPAGAHYLLTYLRDLLAGSALYYVTAGVWHVYIYQLYGDYFFTQQGFEKPSAATIKDQIQLAQASMFLYAALPVLAEWFVEKGWTLCYYNIEDVGGWPYYLAFTLLYMSMVEVGVYWMHRTLHENKTLYKYIHGLHHKYNKPSTLSPWASVAFNPIDGILQASPYVVCLFIVPCHYLTHVALVFFTAVWATNIHDAMDGDTEPVMGSKYHTMHHTHYHYNFGQFFIFADWMFGTLRVPEPRGAKAVRRPEGGRAGTAATPMAGMMGEG 354
            MAA  +VF NS   +++   L+   + +S  A    KLSLLL +  G +RL NPHC  +PFC FNDWVNAF F D+ KA  + RLGPAGAHY LTY+RDL+AGS LYY+TAG+WH YIYQ +GDYFFTQQGFEKPSAATIKDQIQLAQASMFLYAALPVLAEW VE GWT CYY +E++GGWPYYLAFTLLY++MVEVGVYWMHRTLHENK LYKYIHGLHHKYNKPSTLSPWASVAFNPIDGILQASPYV+CLF+VPCHYLTHVA+VFFTAVWATNIHDAMDG+TEPVMGSKYHT+HHTHYHYNFGQFFIFADWMFGTLR+PEPR AKAV  P  G   ++     G  G G
Sbjct:    1 MAAYFQVFRNSKIGIVLTLSLIFTTAMASPSAYFPEKLSLLLKTLSGSDRLVNPHCIDNPFCAFNDWVNAFLFRDAVKADVMARLGPAGAHYFLTYVRDLVAGSVLYYLTAGLWHTYIYQWHGDYFFTQQGFEKPSAATIKDQIQLAQASMFLYAALPVLAEWLVESGWTQCYYYVEEIGGWPYYLAFTLLYLAMVEVGVYWMHRTLHENKVLYKYIHGLHHKYNKPSTLSPWASVAFNPIDGILQASPYVICLFLVPCHYLTHVAMVFFTAVWATNIHDAMDGNTEPVMGSKYHTVHHTHYHYNFGQFFIFADWMFGTLRIPEPRAAKAVLSP--GVVPSSGVRTTGKSGRG 351          
BLAST of NO03G03660 vs. NCBI_GenBank
Match: CBJ25606.1 (Sterol C-5 desaturase [Ectocarpus siliculosus])

HSP 1 Score: 343.6 bits (880), Expect = 7.600e-91
Identity = 153/261 (58.62%), Postives = 197/261 (75.48%), Query Frame = 0
Query:   64 FNDWVNAFFFSDSTKAGTIERLGPAGAHYLLTYLRDLLAGSALYYVTAGVWHVYIYQLYGDYFFTQQGFEKPSAATIKDQIQLAQASMFLYAALPVLAEWFVEKGWTLCYYNIEDVGGWPYYLAFTLLYMSMVEVGVYWMHRTLHENKTLYKYIHGLHHKYNKPSTLSPWASVAFNPIDGILQASPYVVCLFIVPCHYLTHVALVFFTAVWATNIHDAMDGDTEPVMGSKYHTMHHTHYHYNFGQFFIFADWMFGTLRVPE 325
            FN W+N+F FS+ T     + +G   AHY LTY+R+ L GS LYY+TA +WH  IY   G   F +     P+ A I DQIQLAQ S  +YA LPVL E+F+E+G+T CY++  DVGG   Y+ +T++Y++ VE+G+YWMHRTLH NK LYKY+H LHHKYN P TLSPWAS+AFNP+DG+LQA PYV+CLF +PCHY TH+A+  FTA+WATNIHDA+ G++EP+MG+KYHT+HHTHYH NFGQFF F D  +GTL+ P+
Sbjct:   15 FNAWINSFLFSEGTIKTARDAMGAKAAHYFLTYVRNFLGGSILYYITAAMWHWVIYVKMGRTLFPK---GMPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLIGYVLYTVVYLTFVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSPETLSPWASIAFNPLDGVLQACPYVICLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNSEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQ 272          
BLAST of NO03G03660 vs. NCBI_GenBank
Match: GAX24578.1 (Delta7-sterol 5-desaturase [Fistulifera solaris])

HSP 1 Score: 307.0 bits (785), Expect = 7.900e-80
Identity = 147/285 (51.58%), Postives = 199/285 (69.82%), Query Frame = 0
Query:   58 RDPFCTFNDWVNAFFFSDSTKAGTIERLGP------AGAHYLLTYLRDLLAGSALYYVTAGVWHVYIY-QLYGDYFFTQQGFEKPSAATIKDQIQLAQASMFLYAALPVLAEWFVEKGWTLCYYNIEDVGGWPYYLAFTLLYMSMVEVGVYWMHRTLHENKTLYKYIHGLHHKYNKPSTLSPWASVAFNPIDGILQASPYVVCLFIVPCHYLTHVALVFFTAVWATNIHDAMDGDTEPVMGSKYHTMHHTHYHYNFGQFFIFADWMFGTLRVPEPRGAKAVRRPE 336
            + P    N ++N+ F   +  A   + L P        +HYLL YLR+L+AG  +YY TA V+H + Y     +  F ++   +PS ATI DQI +AQ SM +Y  LPV+ E+ +EKG+T  Y+ ++++GGW +Y  + L+YM+MVE+G+YW+HRTLH NK LYK++H  HHKYNKP TL+PWAS+AF+P+DG+LQASPYV+   + PCHYLTH+ L+FFTAVWAT IHDAMD + +P+MGSKYHTMHHTHY YN+GQ F F D  +GTLRVP      + R+ E
Sbjct:   89 QQPCRNLNAYLNSIFLPTAFSARLTQELVPYVSDSLEWSHYLLCYLRNLIAGIIVYYGTASVFHYFCYIHPMSEEIFAKR--TRPSVATILDQIVMAQTSMIIYVMLPVIDEFLIEKGFTASYFTVQEIGGWGWYAFYFLVYMTMVEIGIYWVHRTLHTNKWLYKHVHMPHHKYNKPETLTPWASIAFHPLDGMLQASPYVLAGLVCPCHYLTHLILLFFTAVWATYIHDAMDWNIDPIMGSKYHTMHHTHYIYNYGQIFTFCDAFWGTLRVPPTPTGVSTRKIE 371          
BLAST of NO03G03660 vs. NCBI_GenBank
Match: XP_002181997.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC46537.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 305.4 bits (781), Expect = 2.300e-79
Identity = 142/241 (58.92%), Postives = 181/241 (75.10%), Query Frame = 0
Query:   91 HYLLTYLRDLLAGSALYYVTAGVWHVYIY-QLYGDYFFTQQGFEKPSAATIKDQIQLAQASMFLYAALPVLAEWFVEKGWTLCYYNIEDVGGWPYYLAFTLLYMSMVEVGVYWMHRTLHENKTLYKYIHGLHHKYNKPSTLSPWASVAFNPIDGILQASPYVVCLFIVPCHYLTHVALVFFTAVWATNIHDAMDGDTEPVMGSKYHTMHHTHYHYNFGQFFIFADWMFGTLRVP-EPRGAK 330
            HY L Y+R+ +    +YY TAGV+H + Y        F Q    +PSAATI  QI+LAQ S+F+Y  LPV+ E+ VE+ WT  Y+ ++++GGW YYL +T+LY ++VEVG+YWMHR LH NK LY+ +H +HH YNKP TL+PWAS+AF+P+DGILQASPYV  LF+VPCHY TH  L+FFTAVWAT IHDAMD + +P+MGSKYHT+HHTHY YN+GQ F F D +FGTLR+P EP G K
Sbjct:    1 HYALCYMRNFIGAMLVYYGTAGVFHYFCYVHPTTSTAFAQNHRPRPSAATIWHQIKLAQLSLFVYVLLPVVDEFLVEQNWTWTYFTVQEIGGWAYYLLYTVLYFALVEVGIYWMHRKLHTNKWLYRNVHLMHHAYNKPETLTPWASIAFHPLDGILQASPYVAALFVVPCHYPTHFMLLFFTAVWATYIHDAMDFNIDPIMGSKYHTVHHTHYVYNYGQVFTFCDRIFGTLRIPTEPTGGK 241          
BLAST of NO03G03660 vs. NCBI_GenBank
Match: GAX19323.1 (Delta7-sterol 5-desaturase [Fistulifera solaris])

HSP 1 Score: 305.1 bits (780), Expect = 3.000e-79
Identity = 147/285 (51.58%), Postives = 199/285 (69.82%), Query Frame = 0
Query:   58 RDPFCTFNDWVNAFFFSDSTKAGTIERLGP------AGAHYLLTYLRDLLAGSALYYVTAGVWHVYIY-QLYGDYFFTQQGFEKPSAATIKDQIQLAQASMFLYAALPVLAEWFVEKGWTLCYYNIEDVGGWPYYLAFTLLYMSMVEVGVYWMHRTLHENKTLYKYIHGLHHKYNKPSTLSPWASVAFNPIDGILQASPYVVCLFIVPCHYLTHVALVFFTAVWATNIHDAMDGDTEPVMGSKYHTMHHTHYHYNFGQFFIFADWMFGTLRVPEPRGAKAVRRPE 336
            + P    N ++N+ F   +  A   + L P        +HYLL YLR+L+AG  +YY TA V+H + Y     +  F ++  ++PS ATI DQI +AQ SM +Y  LPV+ E+ +EKG+T  Y+ ++++GGW +Y  + LLYM+MVE+G+YW+HRTLH NK LYK++H  HHKYNK  TL+PWAS+AF+P+DG+LQASPYV+   + PCHYLTH+ L+FFTAVWAT IHDAMD + +P+MGSKYHTMHHTHY YN+GQ F F D  +GTLRVP      + R+ E
Sbjct:   90 QQPCRNLNAYLNSIFLPTAFSARLTQELVPYVSNSLEWSHYLLCYLRNLIAGIIVYYGTASVFHYFCYIHPISEEIFAKR--KRPSLATILDQIVMAQTSMIIYVMLPVIDEFLIEKGFTASYFTVQEIGGWGWYAFYFLLYMAMVEIGIYWVHRTLHTNKWLYKHVHMPHHKYNKAETLTPWASIAFHPLDGMLQASPYVLAGLVCPCHYLTHLILLFFTAVWATYIHDAMDWNIDPIMGSKYHTMHHTHYIYNYGQIFTFCDAFWGTLRVPPTPTGISTRKIE 372          
BLAST of NO03G03660 vs. NCBI_GenBank
Match: OEU22386.1 (putative sterol-C5(6)-desaturase, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 279.6 bits (714), Expect = 1.300e-71
Identity = 129/235 (54.89%), Postives = 171/235 (72.77%), Query Frame = 0
Query:   90 AHYLLTYLRDLLAGSALYYVTAGVWHVYIY-QLYGDYFFTQQGFEKPSAATIKDQIQLAQASMFLYAALPVLAEWFVEKGWTLCYYNIEDVGGWPYYLAFTLLYMSMVEVGVYWMHRTLHENKTLYKYIHGLHHKYNKPSTLSPWASVAFNPIDGILQASPYVVCLFIVPCHYLTHVALVFFTAVWATNIHDAMDGDTEPVMGSKYHTMHHTHYHYNFGQFFIFADWMFGTLRVP 324
            AHY+L YLR+ +    +YY TAG +H + Y        F +Q   +PS  TIK QI+L+QASM +Y  LPVL E+ +E G+T  Y+ ++++GGW  ++A  L Y   VE+ +YWMHRTLH NK LYK+IH +HH YNK  TL+PWAS+AF+P+DG+LQASPYV  L  +PCHYLTH +++FFTA+W T IHDAMD +  P+MGSK+HT+HHTH+ YN+GQ F F DW +GTLRVP
Sbjct:    2 AHYVLCYLRNFVGAMVVYYGTAGTFHYFCYVHPMSRQTFEEQKRTRPSWETIKGQIKLSQASMTVYTMLPVLDEFLIESGYTKVYFTVQEIGGWRNHIATMLFYFCCVEICIYWMHRTLHTNKFLYKHIHLIHHLYNKAETLTPWASIAFHPLDGMLQASPYVCLLPFIPCHYLTHFSMLFFTAIWVTYIHDAMDWNFGPIMGSKFHTVHHTHFIYNYGQIFQFCDWFWGTLRVP 236          
BLAST of NO03G03660 vs. NCBI_GenBank
Match: OAE26919.1 (hypothetical protein AXG93_4413s1010 [Marchantia polymorpha subsp. ruderalis] >PTQ33593.1 hypothetical protein MARPO_0087s0033 [Marchantia polymorpha] >PTQ33594.1 hypothetical protein MARPO_0087s0033 [Marchantia polymorpha])

HSP 1 Score: 256.9 bits (655), Expect = 9.300e-65
Identity = 122/269 (45.35%), Postives = 177/269 (65.80%), Query Frame = 0
Query:   61 FCTFNDWVNA---FFFSDSTKAGTIERLGPAGAHYLLTYLRDLLAGSALYYVTAGVWHVYIYQLYGDYFFTQQGFEKPSAATIKDQIQLAQASMFLYAALPVLAEWFVEKGWTLCYYNIEDVGGWPYYLAFTLLYMSMVEVGVYWMHRTLHENKTLYKYIHGLHHKYNKPSTLSPWASVAFNPIDGILQASPYVVCLFIVPCHYLTHVALVFFTAVWATNIHDAMDGDTEPVMGSKYHTMHHTHYHYNFGQFFIFADWMFGTLRVPEPR 327
            F     W+N+   + F  S+   TI        H + ++LR+ +AG  +Y+++ G+W +++YQL  DY+F +     P+   IK QI ++  +M LY  LP L+E+ +E+GWT CY  IE+V GWP Y+ + +LYM+ +E  +YWMHR LH+ K LYK +H  HH YNK +T+SP+A +AFNP DGILQA P+V  LF++P H+ TH  L F  A+W TNIHD +DG+   +MG+ YHT+HHT Y +N+G + +F DW+FGTLR PE R
Sbjct:   60 FVKHTSWINSIVLYPFLPSSLRATI-------PHNVQSWLRNYIAGIFIYFLSGGLWCLWVYQLRKDYYFPKGNI--PTKEPIKMQIVVSMKAMPLYTLLPSLSEYAIERGWTRCYSEIEEV-GWPNYIVYNILYMAFIEFFIYWMHRGLHDVKPLYKLLHATHHIYNKENTMSPFAGLAFNPFDGILQACPHVFALFVIPMHFFTHEFLFFCEAIWTTNIHDCIDGNVFAIMGAAYHTIHHTTYRHNYGHYTVFMDWLFGTLRDPEER 318          
BLAST of NO03G03660 vs. NCBI_GenBank
Match: GAQ82169.1 (delta(7)-sterol-C5(6)-desaturase 1 [Klebsormidium nitens])

HSP 1 Score: 252.3 bits (643), Expect = 2.300e-63
Identity = 124/249 (49.80%), Postives = 165/249 (66.27%), Query Frame = 0
Query:   90 AHYLLTYLRDLLAGSALYYVTAGVWHVYIYQLYGDYFFTQQGFEKPSAATIKDQIQLAQASMFLYAALPVLAEWFVEKGWTLCYYNIEDVGGWPYYLAFTLLYMSMVEVGVYWMHRTLHENKTLYKYIHGLHHKYNKPSTLSPWASVAFNPIDGILQASPYVVCLFIVPCHYLTHVALVFFTAVWATNIHDAMDGDTEPVMGSKYHTMHHTHYHYNFGQFFIFADWMFGTLRVPEPRGAKAVRRPEGGR 339
            +H    Y+R+LL+G ALYYVT G+W VY+Y + G  FF       P A  +  QI ++  +M LY  +P ++E  +E+GWT CY  +E+  GW  +L     YM++VE GVYWMHR LHE K  YK +H  HH YNK +TLSP+A +AF+P+DG+LQASPYV  LF+VP H+ TH  L+F TAVW TNIHD +DG   PVMG+ YHT+HHT Y +N+G + ++ DWM GTLR P PR   A  +  G +
Sbjct:   27 SHEWQIYVRNLLSGLALYYVTGGLWCVYVYGIMGKKFFPSGAI--PKADDMWKQIAVSTRAMPLYVLMPTVSELMIERGWTRCYARVEEY-GWINHLLLAATYMTVVEFGVYWMHRGLHEIKWAYKLLHATHHIYNKQNTLSPFAGLAFHPVDGMLQASPYVFALFLVPMHFFTHELLLFMTAVWTTNIHDCVDGQVWPVMGAGYHTIHHTTYKHNYGHYTVWMDWMCGTLRTP-PRSPAASEKLAGAK 271          
BLAST of NO03G03660 vs. NCBI_GenBank
Match: XP_006842360.1 (delta(7)-sterol-C5(6)-desaturase [Amborella trichopoda] >XP_011622604.1 delta(7)-sterol-C5(6)-desaturase [Amborella trichopoda] >ERN04035.1 hypothetical protein AMTR_s00079p00182550 [Amborella trichopoda])

HSP 1 Score: 250.8 bits (639), Expect = 6.700e-63
Identity = 125/270 (46.30%), Postives = 170/270 (62.96%), Query Frame = 0
Query:   61 FCTFNDWVNAFFFSDSTKAGTIERLGPAGAHYLLTYLRDLLAGSALYYVTAGVWHVYIYQLYGDYFFTQQGFEKPSAATIKDQIQLAQASMFLYAALPVLAEWFVEKGWTLCYYNIEDVGGWPYYLAFTLLYMSMVEVGVYWMHRTLHENKTLYKYIHGLHHKYNKPSTLSPWASVAFNPIDGILQASPYVVCLFIVPCHYLTHVALVFFTAVWATNIHDAMDGDTEPVMGSKYHTMHHTHYHYNFGQFFIFADWMFGTLRVPEPRGAKA 331
            F +  DW N+            E L    AH L ++LR+ +AGS +Y++  G+W  YIY L    +F +     PS   I  QI +   +M LY +LP ++E+ VEKGWT CY +I +V GW  Y+A  + Y+ +VE G+YWMHR LH+ K LYKY+H  HH YNK  TLSP+A +AF+P+DG+LQA P+V+  FIVP H+ TH  L+F   VW TNIHD + G+  PVMG+ YHT+HHT Y +N+G + I+ DWMFGTL  P  +  KA
Sbjct:    8 FVSETDWYNSIVLGSLLP----ENLWKPLAHVLQSWLRNYIAGSLVYFIFGGLWCFYIYYLKRHVYFPKDTI--PSKEAILLQIWVTMKAMPLYVSLPTVSEYMVEKGWTRCYSSISEV-GWLAYIALLIAYLVIVEFGIYWMHRELHDIKPLYKYLHATHHIYNKQDTLSPFAGLAFHPLDGVLQALPHVIAFFIVPTHFFTHELLLFCEGVWTTNIHDCIHGNVWPVMGAGYHTIHHTTYRHNYGHYTIWMDWMFGTLSDPVSKPKKA 270          
BLAST of NO03G03660 vs. NCBI_GenBank
Match: XP_024389153.1 (delta(7)-sterol-C5(6)-desaturase-like [Physcomitrella patens] >PNR45511.1 hypothetical protein PHYPA_015282 [Physcomitrella patens])

HSP 1 Score: 250.0 bits (637), Expect = 1.100e-62
Identity = 116/240 (48.33%), Postives = 166/240 (69.17%), Query Frame = 0
Query:   91 HYLLTYLRDLLAGSALYYVTAGVWHVYIYQLYGDYFFTQQGFEKPSAATIKDQIQLAQASMFLYAALPVLAEWFVEKGWTLCYYNIEDVGGWPYYLAFTLLYMSMVEVGVYWMHRTLHENKTLYKYIHGLHHKYNKPSTLSPWASVAFNPIDGILQASPYVVCLFIVPCHYLTHVALVFFTAVWATNIHDAMDGDTEPVMGSKYHTMHHTHYHYNFGQFFIFADWMFGTLRVPEPRGAKA 331
            H L T+LR+ +AG  LY+V+ G+W +Y+Y   G++FF     + P+   I  QI +   +M +Y  LP L+E+ +E+GWT C+  IEDV GW  Y+   + Y+++VE G+YWMHR LH+ K LYK++H  HH YNK +TLSP+A +AF+PIDGILQA P+V+ LF++P H+ TH  L+F   VW TNIHD +DG+   +MG+ +HT+HHT Y +N+G + +F DW+FGTLR P  R A A
Sbjct:   92 HTLQTWLRNYVAGMLLYFVSGGLWCLYVYSWKGEHFF--PAGDIPAKEPIMLQIWVTMKAMPVYTGLPTLSEYMIERGWTKCFARIEDV-GWLTYVGLVIAYLAVVEFGIYWMHRELHDIKPLYKHLHATHHIYNKQNTLSPFAGLAFHPIDGILQACPHVIALFLLPMHFFTHEVLLFCEGVWTTNIHDCIDGNVWGIMGAGFHTIHHTTYRHNYGHYTVFMDWLFGTLRDPYERKATA 328          
The following BLAST results are available for this feature:
BLAST of NO03G03660 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29861.13.700e-15475.07Fatty acid hydroxylase [Nannochloropsis gaditana][more]
CBJ25606.17.600e-9158.62Sterol C-5 desaturase [Ectocarpus siliculosus][more]
GAX24578.17.900e-8051.58Delta7-sterol 5-desaturase [Fistulifera solaris][more]
XP_002181997.12.300e-7958.92predicted protein, partial [Phaeodactylum tricornu... [more]
GAX19323.13.000e-7951.58Delta7-sterol 5-desaturase [Fistulifera solaris][more]
OEU22386.11.300e-7154.89putative sterol-C5(6)-desaturase, partial [Fragila... [more]
OAE26919.19.300e-6545.35hypothetical protein AXG93_4413s1010 [Marchantia p... [more]
GAQ82169.12.300e-6349.80delta(7)-sterol-C5(6)-desaturase 1 [Klebsormidium ... [more]
XP_006842360.16.700e-6346.30delta(7)-sterol-C5(6)-desaturase [Amborella tricho... [more]
XP_024389153.11.100e-6248.33delta(7)-sterol-C5(6)-desaturase-like [Physcomitre... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005529NSK005529Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G03660.1NO03G03660.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|11480gene_1561Nannochloropsis oceanica (N. oceanica CCMP1779)gene
STE1gene833Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G03660.1NO03G03660.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G03660 ID=NO03G03660|Name=NO03G03660|organism=Nannochloropsis oceanica|type=gene|length=1674bp
CAAAAGGTCTGCTGTCTTCCTTCTCGCTGGAAGTAGCGAGTCCTCTGTGT
GCCCCGTAGCTTCACATTCCGGCAGTCGGAGTCATTTTCTCCTGCTCGCT
TCGTCAGCTCTCCATACACACATGGCGGCCGCATCGCGCGTCTTCTGGAA
CAGgtacgcaggaaaggagtatcacactggatgccctagcatttttttca
agcgttcgtcacggtacggggcgtggttgaggctctggaatgtgaggttt
tttattactgtttctctcttctcccccgtcctcgctttcacttgagtgca
ccacacgcttcacaaagacatgcccagcatttatcacacactcacgctct
ctcaaacccatcatttcaaactctcacggcacatagCATGGCTGCGCTTC
TCGTCCTGGCTTTCTTACTGGGCATCGCTTCGGCTTCCTCGTCCCAAGCA
CCCCTCATCCGAAAACTCTCCCTCCTGCTCACCTCCTCCCTGGGCCCGGA
GCGCCTCGCCAATCCCCACTGTGCAAGGGACCCCTTCTGCACATTTAACG
ATTGGGTCAACGCCTTTTTCTTCAGCGACTCGACCAAGGCAGGAACCATT
GAACGTCTTGGCCCTGCTGGGGCTCACTACCTTTTGACTTACCTTCGGGA
CTTGCTGGCGGGCTCGGCGTTGTATTATGTAACTGCGGGGGTGTGGCATG
TCTATATTTATCAGCTGTATGGTGATTATTTCTTCACTCAACAGGGTTTT
GAAAAACCGAGCGCAGCGACCATCAAGGATCAGATTCAGTTAGCCCAGGC
GAGTATGTTTTTGTATGCGGCCTTGCCGGTGTTGGCGGAGTGGTTTGTGG
AGAAAGGGTGGACGTTGTGCTATTATAATATTGAGGACGTCGGAGGATGG
CCCTATTATTTGGCTTTCACGTTGCTGTACATGTCGATGGTGGAGGTGGG
GGTCTATTGGATGCACAGGACGTTACACGAGAACAAGACTTTGTATAAAT
ACATTCACGGACTCCACCACAAGTATAACAAGCCTAGTACACTCTCCCCT
TGGGCCTCTGTGGCTTTCAACCCCATCGACGGTATCTTGCAAGCATCGCC
GTACGTTGTGTGTCTGTTTATTGTCCCATGCCATTACCTCACGCATGTGG
CCTTGGTGTTTTTTACAGCCGTATGGGCTACCAACATCCATGACGCGATG
GACGGAGACACGGAGCCAGTAATGGGGAGCAAGTACCACACCATGCATCA
CACGCACTACCATTACAATTTCGGGCAATTTTTTATCTTCGCCGATTGGA
TGTTTGGGACTTTGCGTGTGCCGGAGCCGAGGGGGGCGAAGGCAGTTAGG
AGACCGGAGGGAGGGAGGGCGGGGACGGCGGCGACGCCTATGGCAGGAAT
GATGGGGGAGGGAGTTGTGAGCAGGGTGCGGAGTAAGAAAGCGGAGTGAG
AGGTGATTTGGTTGAGAGTGAAAAAGGGAGGATCGGAACATTTTCTTGGT
CAGAGAATTCTGTCTTCTCTCCAGTTGTAGGGAGTGGAGGGAGGGAGGGA
CGAAGGGAGGGAATGAGTAATGGGGAGGACATTTTGTACGATAGCTGCCT
CTCCCTTTTTTTTAGGGTGACTCGGCGAATTGATATCGATTAGAAAACAA
AGCAAAGGCATACGTTCATTATCA
back to top

protein sequence of NO03G03660.1

>NO03G03660.1-protein ID=NO03G03660.1-protein|Name=NO03G03660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=365bp
MAAASRVFWNSMAALLVLAFLLGIASASSSQAPLIRKLSLLLTSSLGPER
LANPHCARDPFCTFNDWVNAFFFSDSTKAGTIERLGPAGAHYLLTYLRDL
LAGSALYYVTAGVWHVYIYQLYGDYFFTQQGFEKPSAATIKDQIQLAQAS
MFLYAALPVLAEWFVEKGWTLCYYNIEDVGGWPYYLAFTLLYMSMVEVGV
YWMHRTLHENKTLYKYIHGLHHKYNKPSTLSPWASVAFNPIDGILQASPY
VVCLFIVPCHYLTHVALVFFTAVWATNIHDAMDGDTEPVMGSKYHTMHHT
HYHYNFGQFFIFADWMFGTLRVPEPRGAKAVRRPEGGRAGTAATPMAGMM
GEGVVSRVRSKKAE*
back to top
Synonyms
Publications