NO03G03570, NO03G03570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G03570 vs. NCBI_GenBank
Match: EWM29784.1 (methionyl-trna [Nannochloropsis gaditana]) HSP 1 Score: 469.2 bits (1206), Expect = 1.400e-128 Identity = 282/430 (65.58%), Postives = 320/430 (74.42%), Query Frame = 0 Query: 1 MAPASATLLKWLSSGLA------RIEWVDKEEMTVKVEGDVVKEPNAVARAVAKAVCPALVGVLPAEHAQVVQWQSWSTDTSDVFAAAVELNTFLEGRSFLVGTAPTLADIQVYWALAPGVKLTFPGPLGGLVALMRWFDFMQHSLRQEA---AFDATLLPALVPLHSIYKPVSMPVYDRKKAGESPGAQEPNGKVAPAVESTKGGPVKKGKDASPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNALDIRVGRMVKVWPHPEAEKLYCEEIDCGEEGGPRQIASGLRQFYSEAAELEGRLVLVLANLKPRKLVGFASNGMVLCASNDEHTEVKIVEPPAGAKVGDRVVFHGFPREGLPLTPAQVQKKKVFETLAPGLMTDGKGVCVYKVASHPFW 422 MAPAS +LKWL++GL ++ W D+E ++ +GD++KEPN VARA+AKAV P L GVLP E QVVQWQSW+++T D+ AVELNTFLEGRSFLVG APTLADIQ+YWALA V L+FPGPLGG VALMRWFD +Q+ LR A ++D T LP LVP+HSI+KPV+MPVYDR K E GA A + +GG XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX NPNALDIRVGR+VKVWPHPEAEKLYCEEIDCGEE GPRQIASGLRQFYS A+ELEGR+VLVLANLKPRKLVGFASNGMVLCAS+ EHT+VK+VEPPA AKVGDRVVF GF E +PLTPAQVQKKKVFE LA GL TD +G C++K +HPFW Sbjct: 1 MAPASPCMLKWLATGLPHATTEHKVHWEDEEHFVLRADGDIIKEPNTVARAIAKAVTPELTGVLPVEQGQVVQWQSWASETEDILGRAVELNTFLEGRSFLVGAAPTLADIQMYWALAKVVALSFPGPLGGSVALMRWFDQIQNCLRVGAFAMSYDVTHLPQLVPMHSIFKPVAMPVYDRSKGQERVGA---------AASAHEGGGT--ASVXXXXXXXXXXXXXXQRDGETGEKAASSDGIXXXXXXXXXXXXXXXXXXXXXXXXLGKGETAPTENPNALDIRVGRLVKVWPHPEAEKLYCEEIDCGEESGPRQIASGLRQFYSAASELEGRMVLVLANLKPRKLVGFASNGMVLCASDTEHTQVKLVEPPAHAKVGDRVVFPGFSTESMPLTPAQVQKKKVFEALAAGLKTDSQGRCIFKDETHPFW 419
BLAST of NO03G03570 vs. NCBI_GenBank
Match: CBN79589.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 183.0 bits (463), Expect = 2.000e-42 Identity = 189/349 (54.15%), Postives = 224/349 (64.18%), Query Frame = 0 Query: 65 VVQWQSWSTDTSDVFAAAVELNTFLEGRSFLVGTAPTLADIQVYWALAPGVKLTFPGPLGGLVALMRWFDFMQHSLRQEAAFDATLLPALVPLHSIYKPVSMPVYDRKKAGESPGAQEPNGKVAPAVESTKGGPVKKGKDASPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNALDIRVGRMVKVWPHPEAEKLYCEEIDCGEEGGPRQIASGLRQFYSEAAELEGRLVLVLANLKPRKLVGFASNGMVLCASNDEHTEVKIVEPPAGAKVGDRVVFHGFPREGLPLTPAQVQKKKVFETLAPGLMTDGKGVCVY 414 V W +ST S A+ LN L GRSFL G A +LAD+ VY+A A V P G + L RWF+ +QH +R A +LP V L +I+ PV++P+ K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +P+ LD+RVG +VK W HP++EKL+CEEID G EG R IASGLR FY+ E++GR V+VLANLKPR + GF SNGMVLCAS+++H+ VKIVEPP GA +G RV G EG P TPAQVQKKK+ E AP L T+ G+ Y Sbjct: 19 VDSWLDFSTSFSSEHLAS--LNKHLPGRSFLAGGAFSLADVAVYFACAAAVAAA-PPAAGKQLHLCRWFNQVQHRVRLLAP-SCPVLPPTVTL-NIFSPVAVPL-PAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDPSKLDVRVGTIVKAWEHPDSEKLFCEEIDLG-EGANRNIASGLRAFYT-LEEMQGRRVIVLANLKPRNIGGFKSNGMVLCASSEDHSVVKIVEPPPGAAIGARVTVSG--TEGEPATPAQVQKKKILEKCAPKLKTNSDGLPGY 357
BLAST of NO03G03570 vs. NCBI_GenBank
Match: OEU18471.1 (nucleic acid-binding protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 174.9 bits (442), Expect = 5.600e-40 Identity = 87/140 (62.14%), Postives = 109/140 (77.86%), Query Frame = 0 Query: 271 NALDIRVGRMVKVWPHPEAEKLYCEEIDCGEEGGPRQIASGLRQFYSEAAELEGRLVLVLANLKPRKLVGFASNGMVLCASNDEHTEVKIVEPPAGAKVGDRVVFHGFPREGLPLTPAQVQKKKVFETLAPGLMTDGKGV 411 +ALDIRVG++VKVWPHPE+ KL+CEEID GE+ PRQIASGLR FY E ++LEGR V+VL NLK RKLVGFAS+GMVLCASN +HT V+ +EPP A++G RV F G+ EG P ++ KKK+FE ++P L TD G+ Sbjct: 2 SALDIRVGKIVKVWPHPESVKLFCEEIDVGED-VPRQIASGLRPFY-ETSDLEGRRVVVLCNLKARKLVGFASHGMVLCASNADHTAVECMEPPEDAEIGQRVTFEGY-TEGEPEPENKIGKKKIFEKVSPDLKTDANGI 138
BLAST of NO03G03570 vs. NCBI_GenBank
Match: XP_012894060.1 (uncharacterized protein [Blastocystis hominis] >CBK20012.2 unnamed protein product [Blastocystis hominis]) HSP 1 Score: 171.8 bits (434), Expect = 4.700e-39 Identity = 83/142 (58.45%), Postives = 104/142 (73.24%), Query Frame = 0 Query: 273 LDIRVGRMVKVWPHPEAEKLYCEEIDCGEEGGPRQIASGLRQFYSEAAELEGRLVLVLANLKPRKLVGFASNGMVLCASNDEHTEVKIVEPPAGAKVGDRVVFHGFPREGLPLTPAQVQKKKVFETLAPGLMTDGKGVCVYK 415 LDIRVGR+++ W HPE+EKLYCEE+D G E PRQI SG+R F++ E++G V VL NLKPRKL GF SNGM+LCAS +H +++PP GAK+G+RV F GF EG P TPAQVQKKK E + P L T+ +GVC +K Sbjct: 218 LDIRVGRIIRAWNHPESEKLYCEEVDVG-EAEPRQIGSGIRAFHT-FEEMQGHRVCVLCNLKPRKLGGFPSNGMLLCASTGDHEHGALIDPPEGAKIGERVTFAGF--EGEPATPAQVQKKKYLEAVLPFLKTNAEGVCCFK 355
BLAST of NO03G03570 vs. NCBI_GenBank
Match: GAX20152.1 (glutamyl-tRNA synthetase [Fistulifera solaris]) HSP 1 Score: 171.8 bits (434), Expect = 4.700e-39 Identity = 90/142 (63.38%), Postives = 106/142 (74.65%), Query Frame = 0 Query: 272 ALDIRVGRMVKVWPHPEAEKLYCEEIDCGEEGGPRQIASGLRQFYSEAAELEGRLVLVLANLKPRKLVGFASNGMVLCASNDEHTEVKIVEPPAGAKVGDRVVFHGF---PREGLPLTPAQVQKKKVFETLAPGLMTDGKGV 411 ALDIRVGR+ KVW HPEAEKLYCEEID G EG PRQIASGLR Y + ++EGR VLVL NLK RKLVGF S+GMVLCASN +HTEVK+V PP AK+G+R+V F EG P ++ KKKVFE +AP L+T+ G+ Sbjct: 705 ALDIRVGRITKVWEHPEAEKLYCEEIDVG-EGEPRQIASGLRP-YLKPDDMEGRKVLVLCNLKERKLVGFPSHGMVLCASNLDHTEVKLVNPPVDAKIGERIVVPDFDFESEEGQPYPENKIGKKKVFENIAPYLVTNKYGI 844
BLAST of NO03G03570 vs. NCBI_GenBank
Match: GBG31121.1 (Methionine--tRNA ligase, cytoplasmic [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 171.4 bits (433), Expect = 6.200e-39 Identity = 164/406 (40.39%), Postives = 208/406 (51.23%), Query Frame = 0 Query: 39 PNAVARAVAKAVCPA------LVGVLPAEHAQVVQWQSWST------DTSDVFAAAVELNTFLEGRSFLVGTA-PTLADIQVYWALAPGVKLTFPGPLGGLVALMRWFDFMQHSLRQEAAFDATLLPALVPLHSIYKPVSMPVYD--RKKAGESPGAQEPNGKVAPAVESTKGGPVKKGKDASPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPNALDIRVGRMVKVWPHPEAEKLYCEEIDCGEEGGPRQIASGLRQFYSEAAELEGRLVLVLANLKPRKLVGFASNGMVLCASNDEHTEVKIVEPPAGAKVGDRVVFHGF---PREGLPLTPAQVQKKKVFETLAPGLMTDGKGVCVYKVASHPFWVGEEG 427 PNA RAV +A A +G E A+V QW S + D V L+ L+ +SF+ P+LAD+ ++WAL + P + A RWF+ +Q +AA L K V V D K + G+ P KVA +G K K + XXXXXXXXXXXXXXXXXXXXXXXXXX +DIRVG++VK W H ++ L+CE ID GEE PR IASGLR FYS ++LEGRL LVL NLK RKL G+ SNGMVLCASN + T+V++V+PPAGA++G+RVVF G P E P TPAQV KKK+FE +AP L T +P W+G++G Sbjct: 36 PNAQLRAVVEAAGGAPEAQRRWLGAGAEEQARVAQWLSVKSKEVVDGDEKSVQKVLEALDGCLQTQSFVASPLYPSLADLALFWALRTSFQ---PKSSDSVPAACRWFNSLQLDESVQAAAGQDL-----------KQVKFAVPDVWSKLPNGAAGSSAPPAKVA------RGDADKDAKKGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKGNNAPAPADDQPII--------------------TKMDIRVGKIVKCWNHEASDHLFCETIDVGEE-EPRPIASGLRSFYSSPSDLEGRLCLVLCNLKARKLGGYLSNGMVLCASNADKTQVEVVDPPAGAEIGERVVFQGIEGGPFE--PATPAQVAKKKIFEAVAPNLKTTAD--------RNPCWLGQDG 390
BLAST of NO03G03570 vs. NCBI_GenBank
Match: GAX13173.1 (glutamyl-tRNA synthetase [Fistulifera solaris]) HSP 1 Score: 171.0 bits (432), Expect = 8.100e-39 Identity = 88/142 (61.97%), Postives = 107/142 (75.35%), Query Frame = 0 Query: 272 ALDIRVGRMVKVWPHPEAEKLYCEEIDCGEEGGPRQIASGLRQFYSEAAELEGRLVLVLANLKPRKLVGFASNGMVLCASNDEHTEVKIVEPPAGAKVGDRVVFHGF---PREGLPLTPAQVQKKKVFETLAPGLMTDGKGV 411 ALDIRVGR+ KVW HPEAEKLYCE+ID GE+ PRQIASGLR Y + ++EGR VLVL NLK RKLVGF S+GMVLCASN +HTEVK+V PP AK+G+R+V F EG P ++ KKKVFE++AP L+T+ G+ Sbjct: 705 ALDIRVGRITKVWEHPEAEKLYCEQIDVGED-EPRQIASGLRP-YLKPEDMEGRKVLVLCNLKERKLVGFPSHGMVLCASNSDHTEVKLVNPPLDAKIGERIVVPDFDFESEEGQPYPENKIGKKKVFESIAPYLVTNKYGI 844
BLAST of NO03G03570 vs. NCBI_GenBank
Match: XP_009034753.1 (hypothetical protein AURANDRAFT_5349, partial [Aureococcus anophagefferens] >EGB10476.1 hypothetical protein AURANDRAFT_5349, partial [Aureococcus anophagefferens]) HSP 1 Score: 170.6 bits (431), Expect = 1.100e-38 Identity = 87/139 (62.59%), Postives = 99/139 (71.22%), Query Frame = 0 Query: 272 ALDIRVGRMVKVWPHPEAEKLYCEEIDCGEEGGPRQIASGLRQFYSEAAELEGRLVLVLANLKPRKLVGFASNGMVLCASNDEHTEVKIVEPPAGAKVGDRVVFHGFPREGLPLTPAQVQKKKVFETLAPGLMTDGKGV 411 ALDIRVG +VK W HPEAEKLYCEEID GEE GPR IASGLR FY+ A ++ GR VL+ ANLK R + GF S GMVLCASN +HT VK++E P GAK GDRV F P P P+ VQKKK+ E + L TDG GV Sbjct: 4 ALDIRVGTVVKCWEHPEAEKLYCEEIDIGEEAGPRTIASGLRPFYASADDIRGRKVLIFANLKARTMQGFKSCGMVLCASNADHTVVKLLEVPPGAKNGDRVAFGDLPVVP-PAAPSAVQKKKLLEKVIGFLKTDGDGV 141
BLAST of NO03G03570 vs. NCBI_GenBank
Match: XP_014529213.1 (nuclear elongation and deformation protein [Blastocystis sp. subtype 4] >KNB45770.1 nuclear elongation and deformation protein [Blastocystis sp. subtype 4]) HSP 1 Score: 167.5 bits (423), Expect = 8.900e-38 Identity = 82/142 (57.75%), Postives = 105/142 (73.94%), Query Frame = 0 Query: 273 LDIRVGRMVKVWPHPEAEKLYCEEIDCGEEGGPRQIASGLRQFYSEAAELEGRLVLVLANLKPRKLVGFASNGMVLCASNDEHTEVKIVEPPAGAKVGDRVVFHGFPREGLPLTPAQVQKKKVFETLAPGLMTDGKGVCVYK 415 LDIRVGR+V+ W HP+++KLYCEE+D G E RQI SG+R F++ E++G V VL NLKPRKL GF SNGM+LCAS ++H+ +++PP GAK+G+RV F GF EG TPAQVQKKK E LAP L T+ +GVC +K Sbjct: 639 LDIRVGRIVRAWNHPDSDKLYCEEVDVG-EAETRQIGSGIRAFHT-FEEMQGHRVCVLCNLKPRKLGGFPSNGMLLCASTEDHSAGALIDPPEGAKIGERVTFPGF--EGEAATPAQVQKKKYVEILAPFLKTNAEGVCCFK 776
BLAST of NO03G03570 vs. NCBI_GenBank
Match: XP_002184855.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC43591.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 166.4 bits (420), Expect = 2.000e-37 Identity = 86/143 (60.14%), Postives = 108/143 (75.52%), Query Frame = 0 Query: 271 NALDIRVGRMVKVWPHPEAEKLYCEEIDCGEEGGPRQIASGLRQFYSEAAELEGRLVLVLANLKPRKLVGFASNGMVLCASNDEHTEVKIVEPPAGAKVGDRVVFHGF---PREGLPLTPAQVQKKKVFETLAPGLMTDGKGV 411 +ALDIRVGR++KVW HPEA+KLYCEEID GE+ PRQIASGLR + + +++GRLVLVL NLK RKLVGFAS+GMVLCASN +H+EV++V PP A++G+RV F EG P +V KKK+ E LAP L+T+ GV Sbjct: 2 SALDIRVGRVLKVWEHPEADKLYCEEIDVGED-EPRQIASGLRP-HLQPEDIDGRLVLVLCNLKERKLVGFASHGMVLCASNADHSEVRLVNPPVDARIGERVSIPDFDFTSEEGAPFAENKVGKKKIVEQLAPYLVTNRYGV 142 The following BLAST results are available for this feature:
BLAST of NO03G03570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G03570 ID=NO03G03570|Name=NO03G03570|organism=Nannochloropsis oceanica|type=gene|length=1340bpback to top protein sequence of NO03G03570.1 >NO03G03570.1-protein ID=NO03G03570.1-protein|Name=NO03G03570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=436bpback to top Synonyms
Publications
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