NO03G03490, NO03G03490 (gene) Nannochloropsis oceanica

Overview
NameNO03G03490
Unique NameNO03G03490
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length993
Alignment locationchr3:1044669..1045661 -

Link to JBrowse

Properties
Property NameValue
DescriptionUridine phosphorylase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1044669..1045661 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009116nucleoside metabolic process
GO:0009116nucleoside metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR035994Nucleoside_phosphorylase_sf
IPR000845Nucleoside_phosphorylase_d
Homology
BLAST of NO03G03490 vs. NCBI_GenBank
Match: PSC68906.1 (malonate-ligase [Micractinium conductrix])

HSP 1 Score: 198.0 bits (502), Expect = 4.700e-47
Identity = 122/294 (41.50%), Postives = 160/294 (54.42%), Query Frame = 0
Query:   40 PRNLDSTTLHLGLKEGQIASRIVTVGCPRRAALITKALDSTQP---IFEHTSPRGFITYTGTFEGVGVSIVAIGMGSPMMDFFVREARQIVAGPLIIARFGTCGVLQSHVTVGGVIVASPGSVLCMRNPDAFLPPTTSXXXXXXXPTDAVNDTVHTPHQPYLVFAPQPSDRALSHALVSELIAELGPARVTQGMNASACSFYSSQGREDTLFDDRNMHVLDTLRTQHPSLLSMEMETFQLFALANASRGTVRAAAASIGVANRPTGDVCEQSVFSCLEVTGGRAVVRALARFVM 331
            P + +  T HLG + G++A+RI++VG  +RA ++ + L    P   +F   S RGF+T TG +  + VSI+   MG    DF VRE R +V G +   R GTCG LQ    +G  IVA PG+ L  RNPDAF P                 + +  P  PY    P PSD  LS AL  E    LGP  V  G+NA+A SFYSSQGR    FDDRN  +L  L   HP+ +++EMET QLF LA  SRGT+R AA  I +A+R + D         LE   G+A + ALA+ V+
Sbjct:   76 PVDAEGRTYHLGTRRGEVANRILSVGSEKRALMLAEYLQPVAPGRGLFMLESSRGFLTITGRYLDIPVSIIVTHMGLANADFVVRENRAVVDGEMAFIRLGTCGALQPPARLGSFIVAEPGAFLIRRNPDAFSPE---------------GEALGLP--PYTFSRPIPSDPVLSLALQLEAARLLGPEGVCSGLNATADSFYSSQGRRSAWFDDRNDTLLADLLAHHPTTVTLEMETAQLFDLARCSRGTMRVAAGVIALADRQSNDFLSGDRIEKLERLAGQACLAALAKTVL 352          
BLAST of NO03G03490 vs. NCBI_GenBank
Match: KOO28413.1 (hypothetical protein Ctob_003196 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 195.7 bits (496), Expect = 2.300e-46
Identity = 131/313 (41.85%), Postives = 163/313 (52.08%), Query Frame = 0
Query:   33 YRDTNAVPR-NLDSTTLHLGLKEGQIASRIVTVGCPRRAALITKALDSTQPIFEHTSPRGFITYTGTFEGVGVSIVAIGMGSPMMDFFVREARQIV------------AGPLIIARFGTCGVLQSHVTVGGVIVASPGSVLCMRNPDAFLPPTTSXXXXXXXPTDAVNDTVHTPHQ-PYLVFAPQPSDRALSHALVSELIAELGPARVTQGMNASACSFYSSQGREDTLFDDRNM--HVLDTLRTQHPSLLSMEMETFQLFALANASR---GTVRAAAASIGVANRPTGDVCEQSVFSCLEVTGGRAVVRALA 327
            YR TN +PR   D  TLH+G+ EG +A RIVT G   RA  +  + D      E +S RGF+T TG   GV VS+VA GMG  MMDF VRE   ++            A   +I RFGTCG ++  V  G V+V SPGS +  R PDAF                     +H P    Y V    PSD ALS A+  EL   LG   V   +N S CSFYSSQGR+D  F+D +     +  +R  HP   S EMETF L  +A  +R     VRA+AA+I VA+RP+GDV        LE  GG A++RALA
Sbjct:   15 YRGTNGMPRQGDDERTLHVGVTEGDVAQRIVTCGTEERARAVAASFDGGIIEREISSARGFLTLTGNCNGVPVSVVATGMGVAMMDFMVREVVAVLPAVSVSDDDEPTAARALIVRFGTCGSIREDVPAGTVVVCSPGSTMVRRQPDAF--------------------CMHGPQACAYHVCNVVPSDGALSRAVEGELKTALGAHSVVAALNVSGCSFYSSQGRQDGSFEDGHELGDPIAMVRAAHPDAASCEMETFHLLDVARCARPYGRAVRASAAAIVVAHRPSGDVLSGETIERLERLGGAAILRALA 307          
BLAST of NO03G03490 vs. NCBI_GenBank
Match: PNW79695.1 (hypothetical protein CHLRE_08g363300v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 194.5 bits (493), Expect = 5.200e-46
Identity = 134/323 (41.49%), Postives = 174/323 (53.87%), Query Frame = 0
Query:   36 TNA-VPRNLDSTTLHLGLKEGQIASRIVTVGCPRRAALITKALDST---QPIFEHTSPRGFITYTGTFEGVGVSIVAIGMGSPMMDFFVREARQIVAGPLIIARFGTCGVLQSHVTVGGVIVASPGSVLCMRNPD----AF-----------------------LPPTTSXXXXXXXPTDAVNDTVHTPHQPYLVFAPQPSDRALSHALVSELIAELGPARVTQGMNASACSFYSSQGREDTLFDDRNMHVLDTLRTQHPSLLSMEMETFQLFALANASRGTVRAAAASIGVANRPTGDVCEQSVFSCLEVTGGRAVVRALAR 328
            TNA  P +++  T HLG KEG++A RI++VG   RA L++  LD     +P+FE  S RGF+T TG FEG  VSIV+  MG P MDF VRE R +V G + I R GTCG +Q    +G +++AS GS+   R+ D    AF                             XXXXXXX                    P P+D  L+  L +E  A +GP RV QG+NASA SFYSSQGR  + F+D N  +L  L   HP L+S+EMETFQL  LA  SRG+++AA   + +A R +    E S    LE+ GG A +RAL R
Sbjct:   69 TNANFPTDVEGRTYHLGTKEGEVAPRILSVGSVGRAQLLSTLLDPPAPGKPLFERISSRGFLTITGRFEGEPVSIVSTHMGMPNMDFVVRENRAVVRGQMAIVRLGTCGAVQRPAKLGDLLIASHGSIGIRRDSDYWTLAFQKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLPVPADGELAALLTAEATAVVGPGRVVQGLNASADSFYSSQGRTGSDFEDCNAALLGELAAAHPDLVSLEMETFQLLDLARCSRGSIKAAGMCVALAERYSNAFLEYSRLEELEIAGGTAALRALVR 391          
BLAST of NO03G03490 vs. NCBI_GenBank
Match: XP_004345923.1 (hypothetical protein ACA1_183130 [Acanthamoeba castellanii str. Neff] >ELR21379.1 hypothetical protein ACA1_183130 [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 194.1 bits (492), Expect = 6.700e-46
Identity = 114/289 (39.45%), Postives = 162/289 (56.06%), Query Frame = 0
Query:   40 PRNLDSTTLHLGLKEGQIASRIVTVGCPRRAALITKALDSTQPIFEHTSPRGFITYTGTFEGVGVSIVAIGMGSPMMDFFVREARQIVAGPLIIARFGTCGVLQSHVTVGGVIVASPGSVLCMRNPDAFLPPTTSXXXXXXXPTDAVNDTVHTPHQPYLVFAPQPSDRALSHALVSELIAELGPARVTQGMNASACSFYSSQGREDTLFDDRNMHVLDTLRTQHPSLLSMEMETFQLFALANASRGTVRAAAASIGVANRPTGDVCEQSVFSCLEVTGGRAVVRALARF 329
            P + +    HLG+K G++A+RI++VG   RAAL+    D     F   S RGF+ +TG  +GV ++I+A GMG PM+DF VRE R IV GP++IARFGTCG  Q+ + +G + VAS GS+   R  DAFL               A  +        Y +    P+D  LS  + ++L   + P  + +G+N +  SFYSSQGR  T F+D N  +LD +   HP + S+EMETF L       RGT+ A+AA+I +A R +G   + +    LE  GG AV+ ALA +
Sbjct:   37 PMDAEGRVYHLGVKAGEVANRILSVGDSGRAALLATFFDDPSKTFTRASTRGFVIHTGRRKGVPMTIIATGMGIPMIDFVVRECRAIVEGPMVIARFGTCGTPQTDIPIGSICVASKGSICATRKYDAFL-------------ESAQKEGARKALDYYALSTIFPADATLSELITAKLEKSVRPEIIHRGLNITGDSFYSSQGRVTTHFEDYNETLLDEVLEIHPDVASLEMETFHL-------RGTITASAATIVLAQRRSGAFLDHATTRQLERDGGCAVLDALAEY 305          
BLAST of NO03G03490 vs. NCBI_GenBank
Match: XP_006682874.1 (hypothetical protein BATDEDRAFT_37549 [Batrachochytrium dendrobatidis JAM81] >EGF76492.1 hypothetical protein BATDEDRAFT_37549 [Batrachochytrium dendrobatidis JAM81])

HSP 1 Score: 193.7 bits (491), Expect = 8.800e-46
Identity = 117/291 (40.21%), Postives = 168/291 (57.73%), Query Frame = 0
Query:   40 PRNLDSTTLHLGLKEGQIASRIVTVGCPRRAALITKALDSTQPIFEHTSPRGFITYTGTFEGVGVSIVAIGMGSPMMDFFVREARQIVAGPLIIARFGTCGVLQSHVTVGGVIVASPGSVLCMRNPDAFLPPTTSXXXXXXXPTDAVNDTVHTPHQPYLVFAPQPSDRALSHALVSELIAELGPARVTQGMNASACSFYSSQGREDTLFDDRNMHVLDTLRTQHPSLLSMEMETFQLFALANAS-----RGTVRAAAASIGVANRPTGDVCEQSVFSCLEVTGGRAVVRAL 326
            P + +  T H+G+K  ++A+RI+TVG P+RA  I + LDST  +F+H S RGF T TGT++G  VS++AIGMG+PM D  VRE R++V+GP+I+ RFG+CG +  +  VG + VA  G+V   RN D F P  +                  +   PYLV    PSD  LS  L S L   LG   V  G+NA+A SFYSSQGR+D  F+D N  ++DT+R ++P+  ++EME+  L  LA  +     + ++RA A ++  A+R T           LE    RA++ AL
Sbjct:    7 PVDNEGRTYHVGVKHNEVANRIITVGDPKRAYKIAEHLDST--VFKHESKRGFTTITGTYKGTPVSLIAIGMGTPMADMMVREVREVVSGPIIMIRFGSCGGIGENSRVGLMAVAKDGAVNVCRNYDYFAPMYS-----------GTAPEATSTEGPYLVSKICPSDVQLSELLYSSLSDCLGKDAVITGLNATADSFYSSQGRQDPGFNDHNSDLIDTIRKKYPNCETLEMESHMLLHLARCATFHTPQASIRATACAMVFADRKTNAFIAPETVHELEAKASRAILDAL 284          
BLAST of NO03G03490 vs. NCBI_GenBank
Match: OAJ39218.1 (hypothetical protein BDEG_23081 [Batrachochytrium dendrobatidis JEL423])

HSP 1 Score: 193.7 bits (491), Expect = 8.800e-46
Identity = 117/291 (40.21%), Postives = 168/291 (57.73%), Query Frame = 0
Query:   40 PRNLDSTTLHLGLKEGQIASRIVTVGCPRRAALITKALDSTQPIFEHTSPRGFITYTGTFEGVGVSIVAIGMGSPMMDFFVREARQIVAGPLIIARFGTCGVLQSHVTVGGVIVASPGSVLCMRNPDAFLPPTTSXXXXXXXPTDAVNDTVHTPHQPYLVFAPQPSDRALSHALVSELIAELGPARVTQGMNASACSFYSSQGREDTLFDDRNMHVLDTLRTQHPSLLSMEMETFQLFALANAS-----RGTVRAAAASIGVANRPTGDVCEQSVFSCLEVTGGRAVVRAL 326
            P + +  T H+G+K  ++A+RI+TVG P+RA  I + LDST  +F+H S RGF T TGT++G  VS++AIGMG+PM D  VRE R++V+GP+I+ RFG+CG +  +  VG + VA  G+V   RN D F P  +                  +   PYLV    PSD  LS  L S L   LG   V  G+NA+A SFYSSQGR+D  F+D N  ++DT+R ++P+  ++EME+  L  LA  +     + ++RA A ++  A+R T           LE    RA++ AL
Sbjct:   13 PVDNEGRTYHVGVKHNEVANRIITVGDPKRAYKIAEHLDST--VFKHESKRGFTTITGTYKGTPVSLIAIGMGTPMADMMVREVREVVSGPIIMIRFGSCGGIGENSRVGLMAVAKDGAVNVCRNYDYFAPMYS-----------GTAPEATSTEGPYLVSKICPSDVQLSELLYSSLSDCLGKDAVITGLNATADSFYSSQGRQDPGFNDHNSDLIDTIRKKYPNCETLEMESHMLLHLARCATFHTPQASIRATACAMVFADRKTNAFIAPETVHELEAKASRAILDAL 290          
BLAST of NO03G03490 vs. NCBI_GenBank
Match: ORX92097.1 (purine and uridine phosphorylase [Basidiobolus meristosporus CBS 931.73])

HSP 1 Score: 192.6 bits (488), Expect = 2.000e-45
Identity = 120/298 (40.27%), Postives = 164/298 (55.03%), Query Frame = 0
Query:   40 PRNLDSTTLHLGLKEGQIASRIVTVGCPRRAALITKALDSTQPIFEHTSPRGFITYTGTFEGVGVSIVAIGMGSPMMDFFVREARQIVAGPLIIARFGTCGVLQSHVTVGGVIVASPGSVLCMRNPDAFLPPTTSXXXXXXXPTDAVNDTVHTPHQPYLVFAPQPSDRALSHALVSELIAELGPARVTQGMNASACSFYSSQGREDTLFDDRNMHVLDTLRTQHPSLLSMEMETFQLFALANASRG---------TVRAAAASIGVANRPTGDVCEQSVFSCLEVTGGRAVVRALARF 329
            P + D  T H+ LK G+ A+RI+TVG P RA  +TK LDS QP+FE +S RGF T TG ++GV VSI+AIGMG  MMDFFVRE R +V GP+ I R G+CG L           A PG          F+ PT+S          A N     P+   L F   P+D+ L+  L  EL    G  +V  G+N +A SFYSSQGR D  F D N ++ + +R + P+ +S+EMETF L+ LA+ S G         ++  +A+ +  A+R T    + S+   LE   GRAV  +L ++
Sbjct:    9 PTSPDGRTYHVELKHGEAANRIITVGDPARAKRLTKFLDSDQPVFELSSHRGFYTATGHYKGVPVSIIAIGMGISMMDFFVREVRAVVDGPMCIIRLGSCGALNG---------AKPGE---------FMVPTSSVALTRNYNYFAPNSNATKPYDISLEF---PADKDLTDILTDELNQAFGEEKVHNGVNITADSFYSSQGRVDGNFVDANENLFEVIREELPTAVSLEMETFMLYHLAHCSTGAPVAEKSSRSIHCSASMMVFADRVTNQFIDHSIVPALEEKAGRAVFESLIKW 285          
BLAST of NO03G03490 vs. NCBI_GenBank
Match: PRW58451.1 (uridine phosphorylase [Chlorella sorokiniana])

HSP 1 Score: 192.6 bits (488), Expect = 2.000e-45
Identity = 121/297 (40.74%), Postives = 157/297 (52.86%), Query Frame = 0
Query:   34 RDTNAVPRNLDSTTLHLGLKEGQIASRIVTVGCPRRAALITKALDSTQP---IFEHTSPRGFITYTGTFEGVGVSIVAIGMGSPMMDFFVREARQIVAGPLIIARFGTCGVLQSHVTVGGVIVASPGSVLCMRNPDAFLPPTTSXXXXXXXPTDAVNDTVHTPHQPYLVFAPQPSDRALSHALVSELIAELGPARVTQGMNASACSFYSSQGREDTLFDDRNMHVLDTLRTQHPSLLSMEMETFQLFALANASRGTVRAAAASIGVANRPTGDVCEQSVFSCLEVTGGRAVVRALAR 328
            RD N  P + +  T HLG K G++A+RI++VG  +RA ++ + L    P   +F   S RGF+T TG + G  VSIV   MG    DF VRE R +V G +   R GTCG L+    +G  IVA PG++L  R+PDAF P   +                     PY    P PSD  LS AL  E    LG   V  G+NA+A SFYSSQGR    FDDRN  +L  L   +P  +++EMET  L  LA  SRG++RAAA  I +A+R + D         LE   G+A + ALAR
Sbjct:   75 RDAN-FPMDAEGRTYHLGTKRGEVANRILSVGSEKRALVLAEYLQPPAPGRGLFMLESSRGFLTITGRYLGTPVSIVVTHMGLANADFVVRENRAVVDGEMAFIRLGTCGALRPPARLGSFIVADPGAILIRRDPDAFSPEGEACGL-----------------PPYRFSRPIPSDPLLSQALQQEAARRLGAENVCSGLNATADSFYSSQGRRTDWFDDRNEALLGELLQAYPQAITLEMETAMLLDLARCSRGSIRAAAGVIALADRQSNDFLAADRIEELERLTGQACLAALAR 353          
BLAST of NO03G03490 vs. NCBI_GenBank
Match: GAX77180.1 (hypothetical protein CEUSTIGMA_g4626.t1 [Chlamydomonas eustigma])

HSP 1 Score: 189.5 bits (480), Expect = 1.700e-44
Identity = 110/291 (37.80%), Postives = 165/291 (56.70%), Query Frame = 0
Query:   40 PRNLDSTTLHLGLKEGQIASRIVTVGCPRRAALITKALD---STQPIFEHTSPRGFITYTGTFEGVGVSIVAIGMGSPMMDFFVREARQIVAGPLIIARFGTCGVLQSHVTVGGVIVASPGSVLCMRNPDAFLPPTTSXXXXXXXPTDAVNDTVHTPHQPYLVFAPQPSDRALSHALVSELIAELGPARVTQGMNASACSFYSSQGREDTLFDDRNMHVLDTLRTQHPSLLSMEMETFQLFALANASRGTVRAAAASIGVANRPTGDVCEQSVFSCLEVTGGRAVVRALAR 328
            P   +  T HLG K G++A+RI++VG  +RA L++K LD   +   +F + S RGF+T TG ++G  +SIV+  MG P MDF VRE R +V GP+ + R GTCG LQ   ++G +I+A   S+   RNPDA+   +T+                      Y+   P  +D  +   L  E  + +G + V  G+NA+A SFYSSQGR    FDDRN  +++ +  ++P ++S+EMETF L  +A  S G VRAA   + +A+R + ++ E +    LEV  G A +RAL +
Sbjct:   61 PTTPEGRTYHLGTKGGEVANRILSVGATQRAELLSKLLDPPPNGGQLFRYLSSRGFLTVTGEYQGTPISIVSTQMGMPNMDFVVRECRAVVEGPMAVVRLGTCGALQPPASLGQLIIAH-SSINIRRNPDAWSDLSTASML-----------------PAYMFTLPVQADPHIVRLLAEEASSTMGASNVISGLNATADSFYSSQGRVGGNFDDRNEGLIEEMCEKYPDMVSLEMETFHLLDMARCSGGRVRAAGMCLALADRKSNEMLEYARLEQLEVEAGLAALRALIK 333          
BLAST of NO03G03490 vs. NCBI_GenBank
Match: POM67700.1 (Purine and uridine phosphorylase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 188.0 bits (476), Expect = 4.800e-44
Identity = 114/259 (44.02%), Postives = 150/259 (57.92%), Query Frame = 0
Query:   33 YRDTNAVPRNLDSTTLHLGLKEGQIASRIVTVGCPRRAALITKALDSTQ-PIFEHTSPRGFITYTGTFEGVGVSIVAIGMGSPMMDFFVREARQIVAGPLIIARFGTCGVLQSHVTVGGVIVASPGSVLCMRNPDAFLPPTTSXXXXXXXPTDAVNDTVHTPHQPYLVFAPQPSDRALSHALVS---ELIA-ELGPARVT----------QGMNASACSFYSSQGREDTLFDDRNMHVLDTLRTQHPSLLSMEMETFQL 277
            Y++TN +P+ +D + LHLG+  GQ+A+R+V+VG   RA  + + LD  +   FE  S RGF T+TG   GV VSIVA GMG P MDF VRE R IV GP+ I RFGTCG ++  VT G V+V+  GS++  RNPDAF P TT                       Y V    P+   LS+A+ +   +LI    GP   T          +G+NA+ACSFYSSQGR D+ FDDRN  +++TL    P L ++EMETF L
Sbjct:    3 YQNTNTMPKYIDGSVLHLGVNSGQVANRVVSVGSLDRAKQLAQLLDDGKFDTFE--SSRGFTTFTGKMNGVLVSIVATGMGVPNMDFVVRETRAIVEGPMSIIRFGTCGSVKKDVTPGSVVVSGKGSIMITRNPDAFFPDTTEDDY-------------------YRVSRVMPASIVLSNAVAAMKEKLIGLRAGPTITTSSDCNAIGVFEGLNATACSFYSSQGRLDSAFDDRNEQLVETLIKLRPDLHTVEMETFHL 240          
The following BLAST results are available for this feature:
BLAST of NO03G03490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
PSC68906.14.700e-4741.50malonate-ligase [Micractinium conductrix][more]
KOO28413.12.300e-4641.85hypothetical protein Ctob_003196 [Chrysochromulina... [more]
PNW79695.15.200e-4641.49hypothetical protein CHLRE_08g363300v5 [Chlamydomo... [more]
XP_004345923.16.700e-4639.45hypothetical protein ACA1_183130 [Acanthamoeba cas... [more]
XP_006682874.18.800e-4640.21hypothetical protein BATDEDRAFT_37549 [Batrachochy... [more]
OAJ39218.18.800e-4640.21hypothetical protein BDEG_23081 [Batrachochytrium ... [more]
ORX92097.12.000e-4540.27purine and uridine phosphorylase [Basidiobolus mer... [more]
PRW58451.12.000e-4540.74uridine phosphorylase [Chlorella sorokiniana][more]
GAX77180.11.700e-4437.80hypothetical protein CEUSTIGMA_g4626.t1 [Chlamydom... [more]
POM67700.14.800e-4444.02Purine and uridine phosphorylase [Phytophthora pal... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005547NSK005547Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G03490.1NO03G03490.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|11042gene_1543Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100017g81gene849Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G03490.1NO03G03490.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G03490 ID=NO03G03490|Name=NO03G03490|organism=Nannochloropsis oceanica|type=gene|length=993bp
ATGGAGGCAACAAATGGAAAAAAGGGAGACACGCCTACTCCGACCACTGC
AGCCACCACTACCAGCAGCAACGACAACGATACACCGCGATGCATCTACC
GGGACACGAATGCGGTTCCTCGTAACCTCGACTCGACGACGCTCCACCTT
GGCCTCAAAGAAGGCCAAATAGCCTCCCGCATCGTCACGGTTGGCTGCCC
AAGACGTGCCGCGCTGATTACCAAGGCACTAGATAGCACGCAACCAATCT
TTGAGCACACCTCGCCGCGTGGTTTTATTACCTATACGGGAACCTTTGAG
GGTGTAGGCGTTTCCATTGTTGCTATTGGGATGGGTTCGCCCATGATGGA
TTTTTTTGTGCGGGAAGCCAGGCAAATTGTCGCAGGCCCCTTGATCATTG
CCCGCTTTGGGACTTGTGGAGTGTTGCAGTCACATGTGACTGTCGGCGGG
GTCATTGTTGCATCTCCTGGCTCCGTGCTGTGCATGCGCAACCCCGACGC
CTTCTTGCCTCCCACCACCTCCACCACTACGACAAAAACGGTACCAACAG
ACGCTGTCAACGATACGGTTCACACACCTCACCAACCATATCTGGTATTT
GCACCTCAACCCTCTGATCGAGCACTATCCCATGCCTTGGTTTCTGAACT
CATCGCCGAGCTAGGTCCTGCCCGAGTTACACAAGGAATGAACGCCTCTG
CCTGCTCCTTCTACTCTTCCCAAGGCCGAGAAGACACCCTGTTCGACGAC
CGGAACATGCACGTGCTCGACACACTGCGGACCCAGCATCCTTCGTTGTT
AAGCATGGAAATGGAGACTTTTCAATTGTTTGCTTTGGCAAACGCCAGTC
GGGGTACTGTTCGCGCGGCGGCCGCGAGTATTGGTGTCGCGAACCGTCCT
ACAGGCGATGTGTGTGAACAGTCAGTTTTCAGTTGTTTGGAAGTTACAGG
GGGCAGGGCAGTGGTAAGAGCGCTGGCGAGATTCGTGATGTAG
back to top

protein sequence of NO03G03490.1

>NO03G03490.1-protein ID=NO03G03490.1-protein|Name=NO03G03490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=331bp
MEATNGKKGDTPTPTTAATTTSSNDNDTPRCIYRDTNAVPRNLDSTTLHL
GLKEGQIASRIVTVGCPRRAALITKALDSTQPIFEHTSPRGFITYTGTFE
GVGVSIVAIGMGSPMMDFFVREARQIVAGPLIIARFGTCGVLQSHVTVGG
VIVASPGSVLCMRNPDAFLPPTTSTTTTKTVPTDAVNDTVHTPHQPYLVF
APQPSDRALSHALVSELIAELGPARVTQGMNASACSFYSSQGREDTLFDD
RNMHVLDTLRTQHPSLLSMEMETFQLFALANASRGTVRAAAASIGVANRP
TGDVCEQSVFSCLEVTGGRAVVRALARFVM*
back to top
Synonyms
Publications