NO03G03470, NO03G03470 (gene) Nannochloropsis oceanica

Overview
NameNO03G03470
Unique NameNO03G03470
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3093
Alignment locationchr3:1039566..1042658 -

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Properties
Property NameValue
DescriptionPleckstrin like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:1039566..1042658 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
Homology
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BLAST of NO03G03470 vs. NCBI_GenBank
Match: EWM29794.1 (Pleckstrin like protein [Nannochloropsis gaditana])

HSP 1 Score: 442.2 bits (1136), Expect = 3.200e-120
Identity = 301/702 (42.88%), Postives = 398/702 (56.70%), Query Frame = 0 
Query:   72 FRRSPPHPLVTRTVPDNHILFQGWVTDERCMDVKPKRFLVLEGSTLSFYQNEENTGPMVGMENVEKLRLADDSVLGFVHVPEDKTKLIFLVKGDGGGGTETNDKSFTFSSNGGRDNDEWIEHIQEAIESIQRQSEQELVGFPPGQSSILSTPSTRNGDTATCVERGTPLGSDGRMQMSAPS----------LPSSEPAFSRPVVPMSPSSRQQPPSSLQKQRIPIVESSLVPLAPFELSIQNPHTLHLRSSVSCTQPVSIITATPPQAPLAQYPHQPQQQLQQHDAVWTPVPVSSSQQPTPWGE-AGDGEGKRAESASHLSVLPPSPGMLRKDESNSGXXXXXXXXXXXXMDETTAGMLGMTVRTLAAVTGXXXXXXXXXXXXXKPTEAALSRGGLTMSALEELAGGKRRPNPEREDMISMEERKQRVEEGMRRTASAC--------------RADARIRVEETVR--NEKYQGWVNMSRRKRYMVLLAPEMPIIAATAAKPQIEL---QVGPPTVFVTAATSSATSTRLPSLSTATLTGKESFPRLALYSNPSDLRSHKPPKETIVLTADCIVESRRLPIAATLSSSGGIRGRGRSSSWQKTSFSAPSTSTTPSSFSETLEPDTVIDLLLTSSRTGLLKTLTLQCFTVEEENRWISELQQAIGALTGEEEYDNSPGFLGGVGSFSRELSEHIFPSVCCSLS 744
            F+R+ P P+VT+ VPD  ILFQGWV DER  D K KRFLVLEG+TL+FY++E+NT P+VG  NVEK  L  +S+L  VH P+D +KL+ +VK  GG G   +  +  FS   G++ DEWIE IQE IESI+R+SE E +G  PG  S+LSTP+TRNG+   C++ GTP  S+ R Q+SA S          LP S+           P+  +   S +QKQ     E+  VP + + L  Q+   LH  S ++ T P S    + PQA   +YP   QQ  Q   A  +P+  SSSQ  TPWG+ A +  G+  +     S++             +G            MD+TT  +L  T+++L                   P EA+ S+  LT+ ALEEL GGKRRP P+RED+ISM+ERK+RVEEGMRRT S C              RA  R       R  +  YQGWV M RRK +MVLL P  P+I++   +  + L   Q G   +      + A+ + +       +TG E+ PRLALY +P DL++HKPPKE I L+AD I++SRRL  +   S +       +SS  + +S + P      SSF +T EPDTVID+LLTSSRTGLLKT T+QCF+VEEENRWISELQQAIG+L G+EEY NSP    G+   S EL EH+    CC LS
Sbjct:   66 FKRAAPPPVVTKAVPDVPILFQGWVVDERREDSKVKRFLVLEGTTLTFYEDEKNTSPVVGQANVEKFHLCGESILDCVHSPDDISKLVLIVKCGGGAGALPSRNALHFSCENGQEKDEWIERIQETIESIKRRSEHESMGVFPGYCSVLSTPTTRNGE--LCMQAGTP-ASETRRQVSALSSSSGGKCAAFLPFSKATLQAFHQQEQPTREEIESSQIQKQ-THTHETPPVP-SSWALPTQSSQKLHSPSPLAQTPPCSTSNTSFPQAVDGRYPSAGQQGPQGVHA--SPIAFSSSQHATPWGKTAEEKSGQTLKEKGLTSIMEAFKPTFHLKADQAGSVHAVDVETGTGMDQTTGAVLAATLQSLPTAA-----QEKREAAINHPQEAS-SKRRLTLDALEELEGGKRRPVPDREDIISMQERKERVEEGMRRT-SLCNLMNQPAGADRRITRAGVRCNTASQSRHGHRSYQGWVKMFRRKWFMVLLPPGKPVISSAEPEEAVPLNCSQSGKDALPGVPHVARASDSMI-------VTGMEALPRLALYHSPKDLQNHKPPKEMISLSADSIIDSRRLSTSINPSIA------TKSSGSKTSSSTKPCIDAAESSFVDTQEPDTVIDILLTSSRTGLLKTYTIQCFSVEEENRWISELQQAIGSLAGDEEYGNSPSLFNGLDGLSHELCEHLMTHTCCILS 740
The following BLAST results are available for this feature:
BLAST of NO03G03470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM29794.13.200e-12042.88Pleckstrin like protein [Nannochloropsis gaditana][more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005549NSK005549Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G03470.1NO03G03470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572642gene_1541Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100017g84gene851Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G03470.1NO03G03470.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G03470 ID=NO03G03470|Name=NO03G03470|organism=Nannochloropsis oceanica|type=gene|length=3093bp
CTGCAGCACTACTCGCCACTCGAGGACCAATGCGGGTGTCGACGTCGACC
GATACGACCATTACTAACGGTCGACATGGGCCCATAAGCCTTACTTTTTC
GCGTTATGTGGGCCAAGGATCATGCACTGAGCAACCAGGACACCTATGCC
CGTCGCAGTCGTAGTTCCTATCCTCGTGTATTACAGCTTCCACAATCTGA
TGTGAGAAGGCAACTAGCAGCATGGAAAAAGCAAGCAACATCGCCGTCCA
CTGGGCGAGATGACGCTCTGGCACCTCTCCGCTGAAACTCCTCTCTCACC
ATCTTCTCTCCCCACGCCAAATTAAGACGTGCGCATATATCTCCATTTAC
TTTACATTCACGATCGACCGTTTCTTTCCCCTTGTTTATGCGCATATAGG
CGCCATGCCCTCCATCTTTGGCCTGGGTGGGAGCGGCAGTGGTAGCAGCC
GGAGTGGCAACGGAAGAGGGGGAAGGAGCAACGACACCGGGCCTGCTCCC
GCGCCTTGTTCCACAAGCCGGGTCAGTAATGAGGAATGTGCTGCTGTCAA
GTCCGCCCACCGATCTGTCAAGGTCATGGAGCCAGTTGTGGACGGCTGCA
GCACAAATTTGGTTGACTTTCGACGCTCCCCCCCCCACCCCCTCGTCACA
CGGACCGTGCCTGACAACCACATCCTCTTCCAGGGCTGGGTCACGGACGA
AAGGTGTATGGATGTTAAACCCAAAAGgtgcatattctcagtttttttat
aggatacgggtgtgtaatgtgcatgacccttcaatccactgcatatgcgt
cgggatcgcgtggtcgactggccccttcctcgatatggagtccccgccat
agtgctttggtcgaattttgtaccctgacctaaatgcttcccatgttccg
aatgtattcaaaatttgtctttttcaattacgcaacgcctctctcgccgc
taccaccttatacagGTTCCTCGTGTTGGAGGGCAGCACCCTGAGCTTCT
ACCAAAATGAGGAAAACACCGGCCCCATGGTTGGAATGGAAAATGTGGAG
AAATTGAGGCTGGCTGATGACTCAGTGCTGGGCTTTGTGCACGTGCCTGA
GGACAAGACCAAGCTGATATTTCTTGTCAAGGGAGATGGAGGAGGTGGAA
CGGAGACGAACGATAAGTCCTTCACTTTCTCCAGCAACGGCGGTCGGGAC
AACGACGAATGGATAGAGCACATCCAGGAGGCAATTGAATCGATCCAGCG
ACAGAGCGAGCAGGAATTAGTTGGTTTTCCGCCGGGTCAGTCGTCCATCC
TGTCTACTCCTAGCACGCGCAATGGCGACACGGCCACCTGCGTGGAGCGT
GGGACCCCACTAGGCTCGGACGGTCGGATGCAAATGTCTGCCCCTTCTTT
GCCGTCCAGCGAACCAGCATTTAGCCGCCCTGTAGTACCAATGTCACCAT
CATCACGACAACAGCCACCATCATCACTGCAAAAGCAAAGGATACCGATT
GTAGAATCGTCCCTCGTCCCACTGGCCCCATTCGAGCTTTCCATCCAAAA
TCCTCACACCTTGCACCTTCGTTCCTCCGTCTCCTGTACCCAGCCCGTCA
GCATCATCACTGCCACTCCACCACAAGCACCGCTGGCCCAGTATCCTCAC
CAGCCGCAACAGCAGCTGCAGCAGCATGACGCGGTTTGGACTCCTGTTCC
TGTCTCGTCGTCGCAGCAACCCACTCCTTGGGGTGAGGCGGGTGACGGGG
AAGGAAAACGAGCCGAGAGTGCGAGTCATTTGTCGGTCCTCCCACCCTCA
CCGGGAATGCTTCGTAAGGATGAGAGCAACTCAGGTTTTGGCGGCGGTGG
TGAAGGGGGAATGGGGAGAGGGATGGACGAGACGACTGCAGGGATGCTAG
GGATGACTGTTCGCACTTTGGCTGCTGTCACGGGCGAGGGGGAGGAGGAA
GATGAGGAGACTGAGGAGGAGGTAAAGCCTACTGAGGCAGCTTTGTCAAG
AGGAGGTCTGACGATGAGCGCCTTGGAAGAGCTAGCAGGGGGAAAGCGAC
GGCCAAATCCAGAACGGGAAGACATGATCAGCATGGAGGAGCGGAAGCAG
CGCGTGGAAGAAGGAATGCGAAGGACAGCGAGTGCTTGTCGGGCTGACGC
CCGCATCAGGGTGGAAGAAACGGTTCGGAACGAGAAGTATCAAGGGTGGG
TGAACATGTCGCGGCGAAAACGGTATATGGTCCTGCTCGCCCCCGAAATG
CCCATAATTGCTGCAACCGCAGCTAAACCACAAATAGAACTACAAGTAGG
ACCACCAACAGTATTCGTAACAGCCGCCACCTCGTCAGCAACATCCACGA
GATTGCCTTCCCTCTCCACGGCAACTTTAACAGGAAAAGAGAGCTTTCCC
CGCCTGGCCCTGTACTCGAACCCGAGTGACCTACGAAGTCACAAGCCACC
AAAGGAGACAATAGTCCTTACAGCTGACTGCATCGTCGAGTCCCGTCGGT
TGCCCATCGCCGCAACCCTTTCGAGCAGCGGTGGCATAAGGGGCAGGGGT
AGGAGCAGTAGTTGGCAGAAGACCTCATTCTCGGCCCCGTCAACCAGTAC
AACGCCGAGCTCGTTTTCCGAGACGCTGGAGCCGGATACGGTCATTGACT
TGCTGCTGACCAGCAGTCGGACAGGGCTCCTCAAGACTTTAACCTTGCAG
TGTTTTACGGTGGAGGAGGAGAATAGATGGATTTCGGAGTTGCAGCAGGC
GATTGGCGCGTTGACGGGCGAAGAGGAGTACGATAACAGCCCAGGGTTCT
TGGGTGGTGTGGGAAGCTTTTCTCGTGAGCTCTCGGAGCACATTTTTCCG
AGTGTGTGCTGTTCTCTCTCATAAAGGTTTTGAATAGGAATATAGAAGAA
TGTGAGTGCAAATTGTCATACGTAAGTATGTACATTCGCACAAACCACTA
AATCAAGCAGATTTTCACTTCTATTGCGTATGCATTTATGCATGTGTGTT
TATTTTGTAGATGTATCCGAATAAAAACAGACCAGTCAGTTTTAAGCATC
TCTTGAAATTCAAAGAAACTTGATTTTGCTTGCTTCGAATCAC
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protein sequence of NO03G03470.1

>NO03G03470.1-protein ID=NO03G03470.1-protein|Name=NO03G03470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=744bp
MPSIFGLGGSGSGSSRSGNGRGGRSNDTGPAPAPCSTSRVSNEECAAVKS
AHRSVKVMEPVVDGCSTNLVDFRRSPPHPLVTRTVPDNHILFQGWVTDER
CMDVKPKRFLVLEGSTLSFYQNEENTGPMVGMENVEKLRLADDSVLGFVH
VPEDKTKLIFLVKGDGGGGTETNDKSFTFSSNGGRDNDEWIEHIQEAIES
IQRQSEQELVGFPPGQSSILSTPSTRNGDTATCVERGTPLGSDGRMQMSA
PSLPSSEPAFSRPVVPMSPSSRQQPPSSLQKQRIPIVESSLVPLAPFELS
IQNPHTLHLRSSVSCTQPVSIITATPPQAPLAQYPHQPQQQLQQHDAVWT
PVPVSSSQQPTPWGEAGDGEGKRAESASHLSVLPPSPGMLRKDESNSGFG
GGGEGGMGRGMDETTAGMLGMTVRTLAAVTGEGEEEDEETEEEVKPTEAA
LSRGGLTMSALEELAGGKRRPNPEREDMISMEERKQRVEEGMRRTASACR
ADARIRVEETVRNEKYQGWVNMSRRKRYMVLLAPEMPIIAATAAKPQIEL
QVGPPTVFVTAATSSATSTRLPSLSTATLTGKESFPRLALYSNPSDLRSH
KPPKETIVLTADCIVESRRLPIAATLSSSGGIRGRGRSSSWQKTSFSAPS
TSTTPSSFSETLEPDTVIDLLLTSSRTGLLKTLTLQCFTVEEENRWISEL
QQAIGALTGEEEYDNSPGFLGGVGSFSRELSEHIFPSVCCSLS*
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Synonyms
Publications