NO03G03040, NO03G03040 (gene) Nannochloropsis oceanica

Overview
NameNO03G03040
Unique NameNO03G03040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3158
Alignment locationchr3:910531..913688 +

Link to JBrowse

Properties
Property NameValue
DescriptionCytohesin 1
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:910531..913688 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0032012regulation of ARF protein signal transduction
GO:0032012regulation of ARF protein signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005086ARF guanyl-nucleotide exchange factor activity
GO:0005086ARF guanyl-nucleotide exchange factor activity
Vocabulary: INTERPRO
TermDefinition
IPR035999Sec7_dom_sf
IPR001849PH_domain
IPR000904Sec7_dom
Homology
BLAST of NO03G03040 vs. NCBI_GenBank
Match: EWM29770.1 (cytohesin 1 [Nannochloropsis gaditana])

HSP 1 Score: 744.2 bits (1920), Expect = 3.800e-211
Identity = 377/572 (65.91%), Postives = 444/572 (77.62%), Query Frame = 0
Query:  129 LSFSRITSTAALSAASTGSTKRESLRAFGPLLR-RAESIKNAPWTIALSSTRARDKRFLEQGIMRFNQKPAAGVELLVSTGVLQRTPAEVAGFLRQHAGELSKKRIGEYVGSQDPFVQEVLSQLLKEYDFQGMPIDEAMRLFINDIRMPGEAQMLDRVLNAFARRFFEVNRTQGWYATEDTVYILSFSIMLLNTDLHNRNLPQKEKMRLEDFVRNNRGINGGQDLPRELLTSLYNSIKQHEMRMKEGDMWESNSLTFIAPRISGWLEKKVQGHLGIGRFHRYWFVLTNGCLFYFRGPTDPDPRCIIILESVMAIKGASSTEIILYSNGGEGTIIKSVKIRKRDKTTAQGRHTRFVLRASTTQERDDWVEAFQTETEPFQRQHRLGNSTANG-------GPTTVRSATPTSSKGSAGALNQTTRSPRSAGGL----QLPQAYSECLMEGWMRRRAETSRAWQRRYFMLVIIEKTKHRPRHVELHWYTTLEMAQSQIGVRGCQGSVGLDDPTLVFNAKTASDGLSYRLPEPTATVFEMETTVHGSKVKDFISPEDEGSLGAWLEALRPFVTIRN 689
            LS  +  +T  +   S G ++R SLR   PL+R R++ IK  PW +AL+STR ++KR +EQGI +FN+K AAG++ L+  GVLQR PA+VA +L Q A ELSKKR+GEY+G  D F QEVL QLL++YDFQGM IDEAMR+FINDIRMPGEAQMLDR+LNAFA+RFFE  R +  YATEDTVYILSFSIMLLNTDLHNRNLP+KEKMRLEDF+RNNRGIN G+DLP ELL++LY SIK+ E+RMKEGDMWES SLTF+APR+SGWLEK++QG LG  RFHR+WFVLTNGCLFYF  P D +PRCIIILE+VMAIKGASSTEIILYSNG  G IIKSVKI KRDK T +G+HT F+ R  + +ERD+WVEAFQTETEPFQR HRLG     G        P    + +  S +G A  L+Q  RSPRS GG+    ++P A++ CL EGWMRRR+  SR WQRRYFML+ + KTKHRP H ELHWYTTLEMAQS IG+RGCQGS+ LDDP LVF   TA    SYRLPEP ATVFE ET +HGSKVK+ ISPED+ SL  WL AL+P V +RN
Sbjct:   62 LSLGKYAATTPV-GPSRGPSRRISLRTLAPLMRLRSQDIKKHPWIVALNSTRVKEKRLIEQGIAKFNEKAAAGIDFLIENGVLQRAPADVAVWLNQQALELSKKRLGEYLGGNDSFAQEVLHQLLQDYDFQGMSIDEAMRVFINDIRMPGEAQMLDRILNAFAKRFFETTRNENQYATEDTVYILSFSIMLLNTDLHNRNLPRKEKMRLEDFIRNNRGINAGRDLPPELLSTLYYSIKRKELRMKEGDMWESESLTFVAPRMSGWLEKQLQGQLGFCRFHRFWFVLTNGCLFYFSSPVDRNPRCIIILEAVMAIKGASSTEIILYSNG--GGIIKSVKIGKRDKATTRGQHTHFIFRTGSQKERDEWVEAFQTETEPFQRHHRLGGCGIPGASQGKCTSPEVASAGSDPSVQGIAKFLSQ-YRSPRSVGGVRPVAEVPHAHTSCLAEGWMRRRSYGSRGWQRRYFMLIAVGKTKHRPEHSELHWYTTLEMAQSHIGIRGCQGSISLDDPYLVFCVTTAIHSPSYRLPEPAATVFEFETMLHGSKVKELISPEDQESLSLWLNALQPLVPVRN 629          
BLAST of NO03G03040 vs. NCBI_GenBank
Match: CBN74515.1 (pleckstrin homology (PH) domain-containing protein [Ectocarpus siliculosus])

HSP 1 Score: 255.8 bits (652), Expect = 4.100e-64
Identity = 178/559 (31.84%), Postives = 278/559 (49.73%), Query Frame = 0
Query:  183 KRFLEQGIMRFNQKPAAGVELLVSTGVLQRTPAEVAGFLRQHAGELSKKRIGEYVGSQDPFVQEVLSQLLKEYDFQGMPIDEAMRLFINDIRMPGEAQMLDRVLNAFARRFFEVNRTQGWYATEDTVYILSFSIMLLNTDLHNRNLPQKEKMRLEDFVRNNRGINGGQDLPRELLTSLYNSIKQHEMRMKEGDMWESNSLTFIAPRISGWLEKKVQGHLGIGRFHRYWFVLTNGCLFYFRGPTDPD--PRCIIILESV-MAIKGASSTEIILYSNGGEGTIIKSVKIRKRDKTTAQGRHTRFVLRASTTQERDDWVEAFQTETEPFQRQHRLGNSTANGGPTTVRSATPTSSKGSA------GALNQTTRSPRSAGGLQLPQAYSECLMEGWMRRRAETSRAWQRRYFMLVIIEKTKHRPRHVELHWYTTLEMAQSQI--GVRGCQGSVGLDDPTLVFNAKTASDGLSYRLPEPTATVFEMETTVHGSKVKD-FISPEDEGSLGAWLEALR-------------------------PFVTIRNSAGDGLFASSALTVTS 705
            ++ +E+G+ +FN  P  G+  L+  G++  +   +  FL    G LSK+R+GEY G  +P  QEVL   LKE  F+   +DEA+R  +   R+PGEAQ +DR++ +FA R+ E N     ++  DT ++L+F +M+LNTD++NRN+ + +KM   +FV+N+RGI+ G+D  +ELL  +Y  IK  E+RM EGDM+ES  +TF+AP+ SGWL+KK  G+  +G++ R+WFVL +  L+YF  P   D  PRCII LE + ++  GA+   I L +N G    +KSVK+   + T  QG H  F LRA T  ERD WV+A + E   F  +     S                            A  +T R  R+   L+        ++ GW R +++  ++  RRY  + +        +   ++++    M    I   +R   GS+ L D T V         L             ++T   G  VK+  I PE++    AW   ++                         P V   +S GDG+ +S +++V S
Sbjct:  412 RKIMERGVNKFNVNPKDGIAYLIDNGLVTDSAQGICSFLCSAEG-LSKRRLGEYFGRDNPKAQEVLRLFLKELKFKNASLDEALRAMVMRFRLPGEAQQMDRIMESFAVRYHEENPYV--FSCSDTAWVLAFGLMMLNTDMYNRNIKESDKMTEAEFVKNHRGIDQGKDPAKELLEGMYRRIKASEIRMAEGDMYESEVITFVAPKKSGWLKKKSTGY--VGKWKRHWFVLNDAVLYYFLAPQHQDEAPRCIIPLEGINISPIGATDLSIGLRTNQG---FVKSVKMAD-NGTMQQGTHRSFTLRADTNSERDIWVDALRAEVPAFHMELSASRSXXXXXXXXXXXXXXXXXXXXXXXXXXFSASGRTRR--RATIDLEASSKMQPPVIRGWARTQSDQHQSGGRRY--IALFRDIGPDQQDNVIYFFGDAAMCDKMIEQHLRTSHGSLNLSDVTRV--------QLQXXXXXXXXRAIALQTGA-GKHVKEVVIVPEEQREFLAWTRNIKECCPGSAYSIAADCTPSASVGATAFPSVNTVDSNGDGVASSVSVSVNS 948          
BLAST of NO03G03040 vs. NCBI_GenBank
Match: XP_023942595.1 (cytohesin-1 isoform X4 [Bicyclus anynana])

HSP 1 Score: 221.5 bits (563), Expect = 8.500e-54
Identity = 136/324 (41.98%), Postives = 196/324 (60.49%), Query Frame = 0
Query:  189 GIMRFNQKPAAGVELLVSTGVLQRTPAEVAGFLRQHAGE-LSKKRIGEYVGSQDPFVQEVLSQLLKEYDFQGMPIDEAMRLFINDIRMPGEAQMLDRVLNAFARRFFEVNRTQGWYATEDTVYILSFSIMLLNTDLHNRNLPQKEKMRLEDFVRNNRGINGGQDLPRELLTSLYNSIKQHEMRMKEGDMWESNSL--TFIAPRISGWLEKKVQGHLGIGRF---HRYWFVLTNGCLFYFRGPTDPDPRCIIILESVMAIKGASSTE----IILYSNGGEGTIIKSVKIRKRDKTTAQGRHTRFVLRASTTQERDDWVEAFQTET 503
            G  +FN  P  G+E L   G+LQRTP +VA FL  H GE LSK  IG+Y+G +  F + VL   ++ +DF  + + +A+R F+   R+PGEAQ +DR++ +FA+R+ ++N     +   DT Y+LSF+I++LNT LHN ++  K+K   E FV  NRGIN G DLP+ELL SLY SIK    ++ E D    N L  TF  P   GWL K  QG    GR+    R WF+L + CL+YF   TD +PR II LE++ +++ AS  +    + LY++GG   +IK+ K     K   +G+HT + + AST +ERD+W+E  +  T
Sbjct:  105 GRKKFNMDPKKGIEYLYENGLLQRTPEDVAQFL--HKGEGLSKTAIGDYLGERSEFNEAVLRAFVELHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMESFAQRYCQLN--PDIFTNADTCYVLSFAIIMLNTSLHNPSV--KDKPTPEQFVAMNRGINNGGDLPQELLLSLYESIKTEPFKIPEDD---GNDLMHTFFNPDKEGWLWK--QG----GRYKSWKRRWFILNDNCLYYFEYTTDKEPRGIIPLENI-SVRAASDRQRPHCLELYASGG-ADLIKACKTDSEGK-VVEGKHTVYRMSASTAEERDEWIECLRRST 410          
BLAST of NO03G03040 vs. NCBI_GenBank
Match: XP_013199816.1 (PREDICTED: GTP exchange factor for ARFs 1 isoform X1 [Amyelois transitella])

HSP 1 Score: 221.1 bits (562), Expect = 1.100e-53
Identity = 136/321 (42.37%), Postives = 194/321 (60.44%), Query Frame = 0
Query:  189 GIMRFNQKPAAGVELLVSTGVLQRTPAEVAGFLRQHAGE-LSKKRIGEYVGSQDPFVQEVLSQLLKEYDFQGMPIDEAMRLFINDIRMPGEAQMLDRVLNAFARRFFEVNRTQGWYATEDTVYILSFSIMLLNTDLHNRNLPQKEKMRLEDFVRNNRGINGGQDLPRELLTSLYNSIKQHEMRMKEGDMWESNSL--TFIAPRISGWLEKKVQGHLGIGRF---HRYWFVLTNGCLFYFRGPTDPDPRCIIILESVMAIKGASSTE----IILYSNGGEGTIIKSVKIRKRDKTTAQGRHTRFVLRASTTQERDDWVEAFQ 500
            G  +FN  P  G+E L   G+LQRTP +VA FL  H GE LSK  IG+Y+G +  F + VL   ++ +DF  + + +A+R F+   R+PGEAQ +DR++  FA+R+ ++N     +   DT Y+LSF+I++LNT LHN ++  KEK   E FV  NRGIN G DLP+ELL SLY SIK    ++ E D    N L  TF  P   GWL K  QG    GR+    R WF+L + CL+YF   TD +PR II LE++ +++ AS  +    + LY++GG   +IK+ K     K   +G+HT + + AST +ERD+W+E  +
Sbjct:  158 GRKKFNMDPKKGIEYLYENGLLQRTPEDVAQFL--HKGEGLSKTAIGDYLGERSDFNEAVLRAFVELHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLN--PDIFTNADTCYVLSFAIIMLNTSLHNPSV--KEKPTPEQFVAMNRGINNGGDLPQELLLSLYESIKTEPFKIPEDD---GNDLMHTFFNPDKEGWLWK--QG----GRYKSWKRRWFILNDNCLYYFEYTTDKEPRGIIPLENI-SVRAASDRQRPHCLELYASGG-ADLIKACKTDSEGK-VVEGKHTVYRMSASTAEERDEWIECLR 460          
BLAST of NO03G03040 vs. NCBI_GenBank
Match: XP_013199817.1 (PREDICTED: GTP exchange factor for ARFs 1 isoform X2 [Amyelois transitella])

HSP 1 Score: 221.1 bits (562), Expect = 1.100e-53
Identity = 136/321 (42.37%), Postives = 194/321 (60.44%), Query Frame = 0
Query:  189 GIMRFNQKPAAGVELLVSTGVLQRTPAEVAGFLRQHAGE-LSKKRIGEYVGSQDPFVQEVLSQLLKEYDFQGMPIDEAMRLFINDIRMPGEAQMLDRVLNAFARRFFEVNRTQGWYATEDTVYILSFSIMLLNTDLHNRNLPQKEKMRLEDFVRNNRGINGGQDLPRELLTSLYNSIKQHEMRMKEGDMWESNSL--TFIAPRISGWLEKKVQGHLGIGRF---HRYWFVLTNGCLFYFRGPTDPDPRCIIILESVMAIKGASSTE----IILYSNGGEGTIIKSVKIRKRDKTTAQGRHTRFVLRASTTQERDDWVEAFQ 500
            G  +FN  P  G+E L   G+LQRTP +VA FL  H GE LSK  IG+Y+G +  F + VL   ++ +DF  + + +A+R F+   R+PGEAQ +DR++  FA+R+ ++N     +   DT Y+LSF+I++LNT LHN ++  KEK   E FV  NRGIN G DLP+ELL SLY SIK    ++ E D    N L  TF  P   GWL K  QG    GR+    R WF+L + CL+YF   TD +PR II LE++ +++ AS  +    + LY++GG   +IK+ K     K   +G+HT + + AST +ERD+W+E  +
Sbjct:  137 GRKKFNMDPKKGIEYLYENGLLQRTPEDVAQFL--HKGEGLSKTAIGDYLGERSDFNEAVLRAFVELHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLN--PDIFTNADTCYVLSFAIIMLNTSLHNPSV--KEKPTPEQFVAMNRGINNGGDLPQELLLSLYESIKTEPFKIPEDD---GNDLMHTFFNPDKEGWLWK--QG----GRYKSWKRRWFILNDNCLYYFEYTTDKEPRGIIPLENI-SVRAASDRQRPHCLELYASGG-ADLIKACKTDSEGK-VVEGKHTVYRMSASTAEERDEWIECLR 439          
BLAST of NO03G03040 vs. NCBI_GenBank
Match: XP_022113472.1 (cytohesin-1 isoform X1 [Pieris rapae] >XP_022113473.1 cytohesin-1 isoform X1 [Pieris rapae] >XP_022113474.1 cytohesin-1 isoform X1 [Pieris rapae])

HSP 1 Score: 219.2 bits (557), Expect = 4.200e-53
Identity = 135/321 (42.06%), Postives = 195/321 (60.75%), Query Frame = 0
Query:  189 GIMRFNQKPAAGVELLVSTGVLQRTPAEVAGFLRQHAGE-LSKKRIGEYVGSQDPFVQEVLSQLLKEYDFQGMPIDEAMRLFINDIRMPGEAQMLDRVLNAFARRFFEVNRTQGWYATEDTVYILSFSIMLLNTDLHNRNLPQKEKMRLEDFVRNNRGINGGQDLPRELLTSLYNSIKQHEMRMKEGDMWESNSL--TFIAPRISGWLEKKVQGHLGIGRF---HRYWFVLTNGCLFYFRGPTDPDPRCIIILESVMAIKGASSTE----IILYSNGGEGTIIKSVKIRKRDKTTAQGRHTRFVLRASTTQERDDWVEAFQ 500
            G  +FN  P  G+E L   G+LQRTP +VA FL  H GE LSK  IG+Y+G +  F + VL   ++ +DF  + + +A+R F+   R+PGEAQ +DR++ +FA+R+ ++N     +   DT Y+LSF+I++LNT LHN ++  K+K   E FV  NRGIN G DLP+ELL SLY SIK    ++ E D    N L  TF  P   GWL K  QG    GR+    R WF+L + CL+YF   TD +PR II LE++ +++ AS  +    + LY++GG   +IK+ K     K   +G+HT + + AST +ERD+W+E  +
Sbjct:  104 GRKKFNMDPKKGIEYLYENGLLQRTPEDVAQFL--HKGEGLSKTAIGDYLGERSDFNEAVLRAFVELHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMESFAQRYCQLN--PDIFTNADTCYVLSFAIIMLNTSLHNPSV--KDKPLPEQFVAMNRGINNGGDLPQELLLSLYESIKTEPFKIPEDD---GNDLMHTFFNPDKEGWLWK--QG----GRYKSWKRRWFILNDNCLYYFEYTTDKEPRGIIPLENI-SVRPASDRQRPHCLELYASGG-ADLIKACKTDSEGK-VVEGKHTVYRMSASTVEERDEWIECLR 406          
BLAST of NO03G03040 vs. NCBI_GenBank
Match: XP_022113475.1 (cytohesin-1 isoform X2 [Pieris rapae])

HSP 1 Score: 219.2 bits (557), Expect = 4.200e-53
Identity = 135/321 (42.06%), Postives = 195/321 (60.75%), Query Frame = 0
Query:  189 GIMRFNQKPAAGVELLVSTGVLQRTPAEVAGFLRQHAGE-LSKKRIGEYVGSQDPFVQEVLSQLLKEYDFQGMPIDEAMRLFINDIRMPGEAQMLDRVLNAFARRFFEVNRTQGWYATEDTVYILSFSIMLLNTDLHNRNLPQKEKMRLEDFVRNNRGINGGQDLPRELLTSLYNSIKQHEMRMKEGDMWESNSL--TFIAPRISGWLEKKVQGHLGIGRF---HRYWFVLTNGCLFYFRGPTDPDPRCIIILESVMAIKGASSTE----IILYSNGGEGTIIKSVKIRKRDKTTAQGRHTRFVLRASTTQERDDWVEAFQ 500
            G  +FN  P  G+E L   G+LQRTP +VA FL  H GE LSK  IG+Y+G +  F + VL   ++ +DF  + + +A+R F+   R+PGEAQ +DR++ +FA+R+ ++N     +   DT Y+LSF+I++LNT LHN ++  K+K   E FV  NRGIN G DLP+ELL SLY SIK    ++ E D    N L  TF  P   GWL K  QG    GR+    R WF+L + CL+YF   TD +PR II LE++ +++ AS  +    + LY++GG   +IK+ K     K   +G+HT + + AST +ERD+W+E  +
Sbjct:   85 GRKKFNMDPKKGIEYLYENGLLQRTPEDVAQFL--HKGEGLSKTAIGDYLGERSDFNEAVLRAFVELHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMESFAQRYCQLN--PDIFTNADTCYVLSFAIIMLNTSLHNPSV--KDKPLPEQFVAMNRGINNGGDLPQELLLSLYESIKTEPFKIPEDD---GNDLMHTFFNPDKEGWLWK--QG----GRYKSWKRRWFILNDNCLYYFEYTTDKEPRGIIPLENI-SVRPASDRQRPHCLELYASGG-ADLIKACKTDSEGK-VVEGKHTVYRMSASTVEERDEWIECLR 387          
BLAST of NO03G03040 vs. NCBI_GenBank
Match: XP_022113476.1 (cytohesin-1 isoform X3 [Pieris rapae])

HSP 1 Score: 219.2 bits (557), Expect = 4.200e-53
Identity = 135/321 (42.06%), Postives = 195/321 (60.75%), Query Frame = 0
Query:  189 GIMRFNQKPAAGVELLVSTGVLQRTPAEVAGFLRQHAGE-LSKKRIGEYVGSQDPFVQEVLSQLLKEYDFQGMPIDEAMRLFINDIRMPGEAQMLDRVLNAFARRFFEVNRTQGWYATEDTVYILSFSIMLLNTDLHNRNLPQKEKMRLEDFVRNNRGINGGQDLPRELLTSLYNSIKQHEMRMKEGDMWESNSL--TFIAPRISGWLEKKVQGHLGIGRF---HRYWFVLTNGCLFYFRGPTDPDPRCIIILESVMAIKGASSTE----IILYSNGGEGTIIKSVKIRKRDKTTAQGRHTRFVLRASTTQERDDWVEAFQ 500
            G  +FN  P  G+E L   G+LQRTP +VA FL  H GE LSK  IG+Y+G +  F + VL   ++ +DF  + + +A+R F+   R+PGEAQ +DR++ +FA+R+ ++N     +   DT Y+LSF+I++LNT LHN ++  K+K   E FV  NRGIN G DLP+ELL SLY SIK    ++ E D    N L  TF  P   GWL K  QG    GR+    R WF+L + CL+YF   TD +PR II LE++ +++ AS  +    + LY++GG   +IK+ K     K   +G+HT + + AST +ERD+W+E  +
Sbjct:   67 GRKKFNMDPKKGIEYLYENGLLQRTPEDVAQFL--HKGEGLSKTAIGDYLGERSDFNEAVLRAFVELHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMESFAQRYCQLN--PDIFTNADTCYVLSFAIIMLNTSLHNPSV--KDKPLPEQFVAMNRGINNGGDLPQELLLSLYESIKTEPFKIPEDD---GNDLMHTFFNPDKEGWLWK--QG----GRYKSWKRRWFILNDNCLYYFEYTTDKEPRGIIPLENI-SVRPASDRQRPHCLELYASGG-ADLIKACKTDSEGK-VVEGKHTVYRMSASTVEERDEWIECLR 369          
BLAST of NO03G03040 vs. NCBI_GenBank
Match: XP_011555536.1 (PREDICTED: cytohesin-1 isoform X1 [Plutella xylostella])

HSP 1 Score: 218.4 bits (555), Expect = 7.200e-53
Identity = 134/321 (41.74%), Postives = 194/321 (60.44%), Query Frame = 0
Query:  189 GIMRFNQKPAAGVELLVSTGVLQRTPAEVAGFLRQHAGE-LSKKRIGEYVGSQDPFVQEVLSQLLKEYDFQGMPIDEAMRLFINDIRMPGEAQMLDRVLNAFARRFFEVNRTQGWYATEDTVYILSFSIMLLNTDLHNRNLPQKEKMRLEDFVRNNRGINGGQDLPRELLTSLYNSIKQHEMRMKEGDMWESNSL--TFIAPRISGWLEKKVQGHLGIGRF---HRYWFVLTNGCLFYFRGPTDPDPRCIIILESVMAIKGASSTE----IILYSNGGEGTIIKSVKIRKRDKTTAQGRHTRFVLRASTTQERDDWVEAFQ 500
            G  +FN  P  G+E L   G+LQRTP +VA FL  H GE LSK  IG+Y+G +  F + VL   ++ +DF  + + +A+R F+   R+PGEAQ +DR++  FA+R+ ++N     +   DT Y+LSF+I++LNT LHN ++  K+K   E FV  NRGIN G DLP+ELL SLY SIK    ++ E D    N L  TF  P   GWL K  QG    GR+    R WF+L + CL+YF   TD +PR II LE++ +++ AS  +    + LY++GG   +IK+ K     K   +G+HT + + A+T +ERD+W+E  +
Sbjct:  105 GRKKFNMDPKKGIEYLYENGLLQRTPEDVAQFL--HKGEGLSKTAIGDYLGERSDFNEAVLKAFVELHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLN--PDIFTNADTCYVLSFAIIMLNTSLHNPSV--KDKPTPEQFVAMNRGINNGGDLPQELLLSLYESIKTEPFKIPEDD---GNDLMHTFFNPDKEGWLWK--QG----GRYKSWKRRWFILNDNCLYYFEYTTDKEPRGIIPLENI-SVRPASDRQRPHCLELYASGG-ADLIKACKTDSEGK-VVEGKHTVYRMSAATVEERDEWIECLR 407          
BLAST of NO03G03040 vs. NCBI_GenBank
Match: XP_011555537.1 (PREDICTED: cytohesin-1 isoform X2 [Plutella xylostella])

HSP 1 Score: 218.4 bits (555), Expect = 7.200e-53
Identity = 134/321 (41.74%), Postives = 194/321 (60.44%), Query Frame = 0
Query:  189 GIMRFNQKPAAGVELLVSTGVLQRTPAEVAGFLRQHAGE-LSKKRIGEYVGSQDPFVQEVLSQLLKEYDFQGMPIDEAMRLFINDIRMPGEAQMLDRVLNAFARRFFEVNRTQGWYATEDTVYILSFSIMLLNTDLHNRNLPQKEKMRLEDFVRNNRGINGGQDLPRELLTSLYNSIKQHEMRMKEGDMWESNSL--TFIAPRISGWLEKKVQGHLGIGRF---HRYWFVLTNGCLFYFRGPTDPDPRCIIILESVMAIKGASSTE----IILYSNGGEGTIIKSVKIRKRDKTTAQGRHTRFVLRASTTQERDDWVEAFQ 500
            G  +FN  P  G+E L   G+LQRTP +VA FL  H GE LSK  IG+Y+G +  F + VL   ++ +DF  + + +A+R F+   R+PGEAQ +DR++  FA+R+ ++N     +   DT Y+LSF+I++LNT LHN ++  K+K   E FV  NRGIN G DLP+ELL SLY SIK    ++ E D    N L  TF  P   GWL K  QG    GR+    R WF+L + CL+YF   TD +PR II LE++ +++ AS  +    + LY++GG   +IK+ K     K   +G+HT + + A+T +ERD+W+E  +
Sbjct:   85 GRKKFNMDPKKGIEYLYENGLLQRTPEDVAQFL--HKGEGLSKTAIGDYLGERSDFNEAVLKAFVELHDFTDLILVQALRQFLWSFRLPGEAQKIDRMMECFAQRYCQLN--PDIFTNADTCYVLSFAIIMLNTSLHNPSV--KDKPTPEQFVAMNRGINNGGDLPQELLLSLYESIKTEPFKIPEDD---GNDLMHTFFNPDKEGWLWK--QG----GRYKSWKRRWFILNDNCLYYFEYTTDKEPRGIIPLENI-SVRPASDRQRPHCLELYASGG-ADLIKACKTDSEGK-VVEGKHTVYRMSAATVEERDEWIECLR 387          
The following BLAST results are available for this feature:
BLAST of NO03G03040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29770.13.800e-21165.91cytohesin 1 [Nannochloropsis gaditana][more]
CBN74515.14.100e-6431.84pleckstrin homology (PH) domain-containing protein... [more]
XP_023942595.18.500e-5441.98cytohesin-1 isoform X4 [Bicyclus anynana][more]
XP_013199816.11.100e-5342.37PREDICTED: GTP exchange factor for ARFs 1 isoform ... [more]
XP_013199817.11.100e-5342.37PREDICTED: GTP exchange factor for ARFs 1 isoform ... [more]
XP_022113472.14.200e-5342.06cytohesin-1 isoform X1 [Pieris rapae] >XP_02211347... [more]
XP_022113475.14.200e-5342.06cytohesin-1 isoform X2 [Pieris rapae][more]
XP_022113476.14.200e-5342.06cytohesin-1 isoform X3 [Pieris rapae][more]
XP_011555536.17.200e-5341.74PREDICTED: cytohesin-1 isoform X1 [Plutella xylost... [more]
XP_011555537.17.200e-5341.74PREDICTED: cytohesin-1 isoform X2 [Plutella xylost... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005592NSK005592Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G03040.1NO03G03040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572410gene_1497Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100022g43gene892Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G03040.1NO03G03040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G03040 ID=NO03G03040|Name=NO03G03040|organism=Nannochloropsis oceanica|type=gene|length=3158bp
AGACAGGGACGACGGGAAACGAGCTCACACTCGAGGACGAGCCTGCTTAC
AACCTACGCCGCCTTCCTCACAGTTAACTCTCCCTTCGGCCTCCGAGGGG
TATCCAGAACCCAGGACCTAGCAATGTCTCATCAGCATGATGGTCAACAC
TACAGAGCTTACTAATACAATACCAAGAGACTTGTCCGACGCCCCGGTCA
TGCAGAATCCTCTCAGTGACGGGCCGTCCGCAGTCAAGCTCTCGAGAACG
GAGGAGTGGCCACTAGCAGAAAACGAAAAGGTAGGGGCACGGGTTGCCCA
GGCATGGGGTGACACCGACAGCACATCTGTAATCAGTAGCAAGATTCAAG
ACCACCACGAGCAGCAGCCTCTTTCCCTGCAGCCGCAGCAGCCACCTGCC
ACCATTTCTTCGTCGACCTTGTCACCCAATGATGGTGCCCCCCCACATGT
GCAGGGACCACCAAAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCGGCAGAAATCACGCCTATCGTTTTCCCGGATTACATCCACCGCA
GCATTGTCGGCGGCATCCACGGGATCGACGAAGCGCGAGAGCTTGCGGGC
GTTTGGCCCTCTACTCCGCCGTGCCGAATCCATCAAGAACGCCCCATGGA
CCATTGCACTCAGTAGCACCCGCGCCAGAGATAAACGATTTCTCGAGCAA
GGTATCATGCGATTCAATCAAAAGCCAGCGGCGGGCGTCGAGCTCCTCGT
TTCCACTGGTGTCTTGCAACGGACCCCTGCGGAGGTGGCTGGCTTTCTGC
GCCAACACGCGGGGGAGCTGAGCAAGAAGCGGATTGGGGAGTATGTAGGG
AGCCAGGACCCGTTTGTGCAAGAGGTATTATCTCAGCTGCTTAAAGAGTA
CGACTTTCAGGGGATGCCTATTGATGAGGCGATGCGGgtaagtgcgcaag
gaaggaagggagggaggaatggaggatggggaggggtgggaattgagtcg
attgcttttgatcctgttggtaatgcttttgaaagccttgaataatgcat
atcgaatcttgtgtggcttcttccctgaccgctgtggcttcttccctgac
cggtttccaaaactcagacctagccaccccctccccccctttctccctcc
cttattcccgctagCTCTTCATCAATGACATCCGCATGCCCGGGGAGGCC
CAAATGCTCGATCGGGTCCTCAATGCGTTCGCCCGTCGCTTCTTTGAGGT
CAATCGTACTCAGGGATGGTACGCAACGGAAGACACGGTATACATTCTGT
CTTTCTCCATCATGTTGCTGAACACCGATCTGCATAATCGCAACCTGCCG
CAGAAGGAAAAAATGCGCTTGGAAGATTTCGTGAGGAATAATCGAGGAAT
TAATGGAGGACAGGACTTACCACGGGAGCTGCTTACGAGCTTATACAATT
CGATCAAGCAGCATGAGATGAGGATGAAGGAGGGGGACATGTGGGAGTCG
AACTCGTTGACCTTCATAGCGCCGCGAATCAGCGGGTGGTTGGAGAAGAA
GGTGCAAGGACATTTGGGCATTGGCCGATTTCATCGATATTGGTTCGTGT
TGACGAATGGATGCTTGTTTTACTTTAGGGGGCCGACGGACCCGGACCCG
CGGTGTATTATTATTTTGGAGTCGGTCATGgtaggtggcgagggagagag
ggctggagaattcgaagagtgaggacaggcctctgtaatttattaaaagc
ctttcaatctctcccccgcaccttgtattttcatatttccacaatttatt
ttcatctatccgcatattctcatactccttcccttcctgtcaccccttct
ccttttagGCAATCAAAGGGGCCTCATCCACGGAAATAATCCTCTACAGC
AACGGCGGCGAGGGCACGATCATCAAGTCCGTCAAGATCAGAAAGCGCGA
CAAAACCACCGCCCAAGGCCGACATACCCGCTTCGTCCTCCGGGCCAGCA
CCACGCAAGAGCGCGATGACTGGGTTGAGGCCTTCCAGACCGAGACAGAA
CCTTTCCAGCGCCAGCATCGACTCGGGAACAGCACTGCCAATGGGGGGCC
AACTACTGTCAGAAGTGCGACTCCCACCAGCAGCAAAGGCAGTGCGGGCG
CTTTGAACCAGACAACTCGAAGCCCAAGGTCCGCGGGAGGGTTGCAGTTG
CCTCAAGCGTACTCGGAGTGTTTGATGGAGGGATGGATGAGGAGGCGGGC
GGAAACGAGCAGGGCATGGCAGCGACGGTACTTTATGCTCGTGATTATAG
AAAAGACGAAGCATCGGCCAAGGCATGTGGAGTTGCATTGGTACACGACT
CTGGAGATGGCTCAGAGCCAAATTGGGGTGCGGGGATGTCAAGGGAGTGT
GGGGCTTGACGATCCGACGTTGGTCTTCAATGCCAAGACTGCCAGCGATG
GGCTTTCGTATCGCCTTCCCGAGCCGACGGCAACTGTGTTTGAGATGGAG
ACGACGGTGCATGGGAGTAAGGTGAAAGACTTTATCTCGCCCGAGGATGA
GGGTAGTCTGGGTGCATGGTTGGAAGCGCTCCGGCCGTTTGTCACCATTC
GGAACAGTGCTGGCGATGGATTGTTTGCGAGTAGTGCGCTTACGGTTACC
AGCCGTCCGGCAAGGGTTTGATTATTCCCCTAAGTGTGTGTTGTGAATTC
TTGTGACTCACAGCAAATGAGATAATGTATTATTATGTATTTGTGTGTCT
GTTTAGAGAAGAAATATATATAAATATATATATATATTCATGAGTCTTTC
GGTACGGTTAGGTACTGTGTGTAGGCATGTGGTCTTTGCTCTCTTCAAAA
ATTATGTGTGATGTTAGGTTGTGTTCTGTGCGCTCTTCATGCAAATAGAA
TCTTAATACAGATGCTCTCTTCATACAAATGGGTTTATTCTCGTGATCAC
TGGTTGGATGTCTGTTAGGGATGTGTGCCGGGTCCTCGTTAAAGGGATGG
ACTGGAATTATTTGCCAGTATTGTATGCAATCATTTTAAATACATCAAAA
TCGTTAATGAGCCACACATTTGAAAATCGCGATGAGTCGCCAGTATAATT
TAGCAGAGATAGTAAGACAGCGTCCGAAAAAAAGAAAATGTGAGAAAGTC
GGAGGATC
back to top

protein sequence of NO03G03040.1

>NO03G03040.1-protein ID=NO03G03040.1-protein|Name=NO03G03040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=710bp
MMVNTTELTNTIPRDLSDAPVMQNPLSDGPSAVKLSRTEEWPLAENEKVG
ARVAQAWGDTDSTSVISSKIQDHHEQQPLSLQPQQPPATISSSTLSPNDG
APPHVQGPPKQQQQQQQQQQQQQRQKSRLSFSRITSTAALSAASTGSTKR
ESLRAFGPLLRRAESIKNAPWTIALSSTRARDKRFLEQGIMRFNQKPAAG
VELLVSTGVLQRTPAEVAGFLRQHAGELSKKRIGEYVGSQDPFVQEVLSQ
LLKEYDFQGMPIDEAMRLFINDIRMPGEAQMLDRVLNAFARRFFEVNRTQ
GWYATEDTVYILSFSIMLLNTDLHNRNLPQKEKMRLEDFVRNNRGINGGQ
DLPRELLTSLYNSIKQHEMRMKEGDMWESNSLTFIAPRISGWLEKKVQGH
LGIGRFHRYWFVLTNGCLFYFRGPTDPDPRCIIILESVMAIKGASSTEII
LYSNGGEGTIIKSVKIRKRDKTTAQGRHTRFVLRASTTQERDDWVEAFQT
ETEPFQRQHRLGNSTANGGPTTVRSATPTSSKGSAGALNQTTRSPRSAGG
LQLPQAYSECLMEGWMRRRAETSRAWQRRYFMLVIIEKTKHRPRHVELHW
YTTLEMAQSQIGVRGCQGSVGLDDPTLVFNAKTASDGLSYRLPEPTATVF
EMETTVHGSKVKDFISPEDEGSLGAWLEALRPFVTIRNSAGDGLFASSAL
TVTSRPARV*
back to top
Synonyms
Publications