NO03G02780, NO03G02780 (gene) Nannochloropsis oceanica

Overview
NameNO03G02780
Unique NameNO03G02780
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3127
Alignment locationchr3:787260..790386 +

Link to JBrowse

Properties
Property NameValue
DescriptionMorn repeat protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:787260..790386 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003409MORN
Homology
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BLAST of NO03G02780 vs. NCBI_GenBank
Match: EWM29710.1 (morn repeat protein [Nannochloropsis gaditana])

HSP 1 Score: 371.7 bits (953), Expect = 6.200e-99
Identity = 443/879 (50.40%), Postives = 510/879 (58.02%), Query Frame = 0 
Query:    1 MEVVLTGRLVLLHQVATATAEAAPKKTEGEKKLASH---EDTAPSGPVHEVKATTTPFQRSKNIAAGPLEVTATSGVATGAETTMLVDEAAHKKD---GAKYRWEGKWYFRGNKNKSSTFAYDVLWSR-QNDKIQQQPEQYYTGQQL--RQEDLNKECLLETSDKKSDINDSDKSTPAIASAAVETTEVLAASKPSPKAASVYASIFSPSSLMAGVLENDALNDEQLNFSL-LPDLPSNLLGDDSIFDLNRAGGDFLDTGRALTGVIGEGGMPARS--AVPTTAESMVAEEAAEADAAVAGSGLSDLFPVDACAKCHGGFFVHNPTGEGVNEIAETFELTILRPATGMATNGNSSSSYVEVLGEGRNVYGEFILEGKINAQHGLRMICHRRYKSDLVK---RTAKANKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXICAGEHRRSSNRITLGVRKTPLFPDQDAGGAGLNLAMPVSATFASSSAGKLLKAAQACNRAELRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSKNGCKRKFSSFSNLTSGVDIENRADTGYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVAEGWVSALADEDGEVYEGEVVDGERDGVGICVFPNGLLYQGTWAQGKEHGSGKLMTHGRXXXXXXXXXXXXXXXXXXXVFPSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRCAAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSNGSAXXXXXXXXXXXXXXXXXELLKPLPGAVDDEWVIPLDVKFDVARAHVKAGFGQGGT 865
            MEVVLTGRL+L      AT     ++ EGE   A H   EDT P        A+ T   RS N A      TAT     G +  M  +EA   +D    AKY WEGKW+FRGNKNKSSTF Y+V+W+R Q D+  ++ E    G+ L  RQ +      + + +K + + D+   T A   AA E                           + G L  D  +  +L+ S+ LP   SN   DD     +  G D +         IG     + S   +    + M+  E      + AGS L D+FP D+   C GGF VHNP+  G+ EI ETF+L +++ +  +       S+YVEVLGEG NVYGEFILEGKINAQHGLRMICHRRYK DL+K   RT KA                                         + A + RRSSNRITLGVR+TPLF DQ AG  G +LAMPVSATFA SSAGK+LKAAQACNRA++R                                           +K   KRK SS        D     +   +                                        +AEGWVSALADEDGEVYEG+VVDGERDG+GIC FPNGLLYQG W +G+EHG GKLMTH RXXXXXXXXXXXXXXXXXXXVFPSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LRC  FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV++NG+AXXXXXXXXXXXXXXXXX L +PLPGAV+DEWVIPLDVK DVARAH+KAGFG GGT
Sbjct:    1 MEVVLTGRLLL----QRATPVTPSERIEGE--AAPHPRQEDTCPG-------ASET---RSTNPANSATNDTATIFSEHGVD--MEGNEATRPEDVISCAKYLWEGKWFFRGNKNKSSTFTYEVVWTRPQGDRHTEEQETRGKGEGLDQRQSESGTNAHVMSEEKVACVADNTSKTAAETVAAHED--------------------------VGGELSLDTRSSRKLSVSVSLPQHDSN-ADDDQHLRASHVGTDLMINTSRGDESIGTKNSNSLSGDTMRKKVKEMIETETPNWQTSTAGSWLHDVFPSDSSVSCRGGFTVHNPSRNGLKEIRETFKLHVVKTSQKVI-----DSNYVEVLGEGCNVYGEFILEGKINAQHGLRMICHRRYKKDLLKRNLRTNKAKSGGNSGSASHAHVLTGVGPSTAPSGDKHAASPSAEVKTQSVVALDQRRSSNRITLGVRRTPLFSDQAAGEGGFHLAMPVSATFAFSSAGKVLKAAQACNRAQIRRAWSKWWRWVSCCRVMEGGENGVVTENGATAGPAL--------TKGSNKRKISSAGYAHPPCDSSGSVE---NKIQGIQQHTQLTRQQLQEWHVEQHTCDSRRTDQSNVEVPHIAEGWVSALADEDGEVYEGDVVDGERDGLGICFFPNGLLYQGRWVRGREHGRGKLMTHSRXXXXXXXXXXXXXXXXXXXVFPSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLRCPEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMANGAAXXXXXXXXXXXXXXXXXXLQEPLPGAVEDEWVIPLDVKVDVARAHIKAGFGLGGT 818
[Close]
BLAST of NO03G02780 vs. NCBI_GenBank
Match: OEU19399.1 (histone H3 K4-specific methyltransferase SET7/9 N-terminal domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 68.2 bits (165), Expect = 1.500e-7
Identity = 28/44 (63.64%), Postives = 35/44 (79.55%), Query Frame = 0 
Query:  626 YEGEVVDGERDGVGICVFPNGLLYQGTWAQGKEHGSGKLMTHGR 670
            YEGE+VD +RDG GIC++ NG+LY+G W + KEHG GKLMT  R
Sbjct:    1 YEGEMVDSKRDGRGICLYNNGMLYEGEWKRNKEHGYGKLMTSDR 44
The following BLAST results are available for this feature:
BLAST of NO03G02780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 2
Match NameE-valueIdentityDescription
EWM29710.16.200e-9950.40morn repeat protein [Nannochloropsis gaditana][more]
OEU19399.11.500e-763.64histone H3 K4-specific methyltransferase SET7/9 N-... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR001ncniR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005618NSK005618Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G02780.1NO03G02780.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G02780.2NO03G02780.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
HYPgene918Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G02780.1NO03G02780.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G02780.2NO03G02780.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G02780 ID=NO03G02780|Name=NO03G02780|organism=Nannochloropsis oceanica|type=gene|length=3127bp
ACAGAGCGCCGCAATCCTTGCAGTCTAAGAGCGAACCTATAACGTTATGG
AGGTGGTCCTGACGGGCCGGCTGGTCCTCCTTCACCAAGTGGCGACCGCA
ACAGCAGAGGCAGCACCCAAGAAGACTGAAGGGGAAAAAAAACTAGCATC
ACATGAAGATACCGCGCCGTCTGGTCCGGTTCATGAAGTCAAGGCGACCA
CCACGCCTTTCCAGCGATCCAAGAATATAGCAGCAGGGCCGCTAGAGGTA
ACCGCAACCTCAGGCGTCGCTACCGGGGCGGAAACAACTATGTTGGTCGA
CGAGGCAGCCCACAAGAAGGATGGCGCGAAGTATCGGTGGGAAGGAAAGT
GGTACTTCCGAGGTAACAAGAACAAGTCCAGCACCTTTGCGTACGACgta
agtctttataatgtcaaatgagcttgtttgatggtagggctcgttgaaat
gacttaataagagggatgaagatgaagagagatggcacctcctcctgcac
ttctttctccattccctgacgactggggcagcggcgagcctacccacttt
ccgctatttagaatgatttgcatgcaccccacctgaaggcaagagctacc
agttttccctggtgcgtatctgactacgttttgattcctgcctcccttct
cacagctccctcctcttccccgcctttctctcttttggaagGTTCTCTGG
TCCCGTCAAAATGACAAAATACAACAGCAGCCTGAGCAATACTACACAGG
GCAACAATTACGGCAAGAGGATCTTAACAAGGAATGCCTGCTGGAGACGT
CGGACAAGAAAAGCGATATTAACGATAGCGACAAGTCTACCCCTGCCATC
GCCTCGGCCGCAGTCGAAACGACTGAAGTCCTTGCCGCCTCAAAACCTTC
CCCCAAAGCCGCGAGTGTATATGCGTCGATTTTTTCCCCCTCATCTCTCA
TGGCAGGAGTCTTGGAGAACGACGCTCTCAATGACGAGCAGTTGAATTTC
TCCCTCCTCCCTGACCTGCCATCCAACCTCCTGGGCGATGACAGCATTTT
CGATTTGAATCGCGCGGGGGGCGATTTCTTGGACACTGGACGGGCTCTCA
CTGGCGTTATTGGTGAAGGAGGCATGCCTGCGCGTTCAGCTGTTCCGACT
ACAGCAGAGTCAATGGTAGCAGAGGAAGCAGCAGAAGCGGATGCAGCGGT
GGCAGGCTCTGGGCTCTCAGATTTATTTCCGGTGGATGCCTGTGCTAAGT
GCCATGGAGGGTTTTTCGTGCATAATCCTACCGGGGAGGGTGTCAATGAG
ATAGCCGAGACATTTGAATTAACCATTCTGCGACCAGCCACGGGTATGGC
GACCAATGGCAACTCGAGCTCGAGTTACGTGGAGGTGCTGGGTGAGGGTC
GGAATGTCTACGGGGAATTCATCTTGGAAGGGAAGATCAACGCCCAGCAT
GGATTACGCATGATCTGCCACCGTCGATATAAGAGTGACTTGGTCAAGCG
TACAGCTAAGGCGAACAAGGCCAAGAACTGCAGTGTCAACAAGACCAAAA
ACACCAATAACACCAACAACGACGACAACAGTGCGAGTTTAGCAGGTGTC
ACAGCATTGGATGCGAGCAACAGCAGCAGCACTGCAATTTGTGCCGGAGA
ACACCGTCGGTCTTCCAATCGTATCACACTTGGTGTCCGCAAGACGCCAT
TGTTCCCAGATCAGGACGCTGGTGGTGCGGGATTAAACCTGGCTATGCCT
GTCTCTGCCACGTTTGCTTCTTCCTCCGCGGGAAAGCTTCTGAAGGCAGC
ACAGGCCTGCAATCGCGCTGAGCTTCGAAGGGTCTGGTGGCAATGGTGGC
AGCATGTGATCGCAGACAGGCAGGAAGAGGAGAAACAAGCGGAAGTTGCT
AGTGCTGAGAAGAGGGCAACCTCGAGCTCTGGCGGTGGGGTGGGTGGGGG
ATATGGCAGCAAGAATGGATGTAAGCGAAAATTCTCCTCGTTTAGTAACT
TGACCTCGGGTGTGGACATAGAGAATAGAGCTGATACAGGTTATCATCGA
CAGCAGCAGCAGCAGCAGCAACAACAGCAGCAGGACTATGAAGGGAATCC
ATGGCGGGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAACAGGGGCCGGTGGCTGAGGGCTGGGTGTCGGCCTTGGCGGAC
GAGGACGGCGAAGTTTATGAAGGGGAGGTGGTAGATGGGGAGCGGGATGG
GGTAGGCATCTGTGTGTTTCCCAACGGTTTGTTGTACCAGGGCACGTGGG
CGCAGGGAAAGGAACACGGATCAGGGAAACTCATGACACACGGTCGGTGC
TTAATTTATGATGGGGAGTGGTCCGAGGGCAAGATGAGCGGAAAGGGCCG
GTATGTGTTCCCTTCCGGTGGGGTCTACGAGGGGGACTGGCGAGAGAACG
TACGTCAGGGACATGGTTGCTACAAACTGCCGGGGGGAGCGAGCTATGAG
GGGGACTGGCGCGAGGACCTTCGGTGGGGATTTGGTGTCTTCACGTGGGC
GGATGGGTCTGTTTATGAAGGCGAATGGGTAAGGGGCATGCGGCAGGGCA
AGGGTACGCTGCGTTGCGCGGCGTTCGAATACGTCGGGCAGTGGACGGAG
AACAAAATGGAGGGTAAAGGgtaagttgggagttgaatattacgaagcgg
tcgtgccggtcgtgatagtcgctatttctccgcggtgacttttgactcgt
gtgtccctcgcattctcaccggttaatttcattttttcattttatcagGG
TGTGCGCCTACGAAAATGGACAACGCTACGAGGGGATGTGGCGCGGGGGC
CTCAAGGACGGACGCGGCCGTCTCGTGCTCTCCAACGGGTCGGCGCAGTA
TGAGGGACGCTTCCGAGAGGATTTTTTGGACGGGCAAGGCACCCTGGAGC
TCTTGAAACCCTTGCCTGGGGCGGTGGATGATGAATGGGTCATACCTCTT
GATGTTAAGTTTGACGTGGCGAGGGCACATGTGAAGGCGGGGTTCGGGCA
AGGGGGTACATAGAGGGGATTAGCACAAGAAGAAAAAGTACATGGTACGA
TTGAATGAAAAAAAACGCTTGCAGGGG
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protein sequence of NO03G02780.1

>NO03G02780.1-protein ID=NO03G02780.1-protein|Name=NO03G02780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=662bp
MAGVLENDALNDEQLNFSLLPDLPSNLLGDDSIFDLNRAGGDFLDTGRAL
TGVIGEGGMPARSAVPTTAESMVAEEAAEADAAVAGSGLSDLFPVDACAK
CHGGFFVHNPTGEGVNEIAETFELTILRPATGMATNGNSSSSYVEVLGEG
RNVYGEFILEGKINAQHGLRMICHRRYKSDLVKRTAKANKAKNCSVNKTK
NTNNTNNDDNSASLAGVTALDASNSSSTAICAGEHRRSSNRITLGVRKTP
LFPDQDAGGAGLNLAMPVSATFASSSAGKLLKAAQACNRAELRRVWWQWW
QHVIADRQEEEKQAEVASAEKRATSSSGGGVGGGYGSKNGCKRKFSSFSN
LTSGVDIENRADTGYHRQQQQQQQQQQQDYEGNPWREQQQQQQQQQQQQQ
QQQQGPVAEGWVSALADEDGEVYEGEVVDGERDGVGICVFPNGLLYQGTW
AQGKEHGSGKLMTHGRCLIYDGEWSEGKMSGKGRYVFPSGGVYEGDWREN
VRQGHGCYKLPGGASYEGDWREDLRWGFGVFTWADGSVYEGEWVRGMRQG
KGTLRCAAFEYVGQWTENKMEGKGVCAYENGQRYEGMWRGGLKDGRGRLV
LSNGSAQYEGRFREDFLDGQGTLELLKPLPGAVDDEWVIPLDVKFDVARA
HVKAGFGQGGT*
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protein sequence of NO03G02780.2

>NO03G02780.2-protein ID=NO03G02780.2-protein|Name=NO03G02780.2|organism=Nannochloropsis oceanica|type=polypeptide|length=865bp
MEVVLTGRLVLLHQVATATAEAAPKKTEGEKKLASHEDTAPSGPVHEVKA
TTTPFQRSKNIAAGPLEVTATSGVATGAETTMLVDEAAHKKDGAKYRWEG
KWYFRGNKNKSSTFAYDVLWSRQNDKIQQQPEQYYTGQQLRQEDLNKECL
LETSDKKSDINDSDKSTPAIASAAVETTEVLAASKPSPKAASVYASIFSP
SSLMAGVLENDALNDEQLNFSLLPDLPSNLLGDDSIFDLNRAGGDFLDTG
RALTGVIGEGGMPARSAVPTTAESMVAEEAAEADAAVAGSGLSDLFPVDA
CAKCHGGFFVHNPTGEGVNEIAETFELTILRPATGMATNGNSSSSYVEVL
GEGRNVYGEFILEGKINAQHGLRMICHRRYKSDLVKRTAKANKAKNCSVN
KTKNTNNTNNDDNSASLAGVTALDASNSSSTAICAGEHRRSSNRITLGVR
KTPLFPDQDAGGAGLNLAMPVSATFASSSAGKLLKAAQACNRAELRRVWW
QWWQHVIADRQEEEKQAEVASAEKRATSSSGGGVGGGYGSKNGCKRKFSS
FSNLTSGVDIENRADTGYHRQQQQQQQQQQQDYEGNPWREQQQQQQQQQQ
QQQQQQQGPVAEGWVSALADEDGEVYEGEVVDGERDGVGICVFPNGLLYQ
GTWAQGKEHGSGKLMTHGRCLIYDGEWSEGKMSGKGRYVFPSGGVYEGDW
RENVRQGHGCYKLPGGASYEGDWREDLRWGFGVFTWADGSVYEGEWVRGM
RQGKGTLRCAAFEYVGQWTENKMEGKGVCAYENGQRYEGMWRGGLKDGRG
RLVLSNGSAQYEGRFREDFLDGQGTLELLKPLPGAVDDEWVIPLDVKFDV
ARAHVKAGFGQGGT*
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Synonyms
Publications