NO03G02770, NO03G02770 (gene) Nannochloropsis oceanica

Overview
NameNO03G02770
Unique NameNO03G02770
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2364
Alignment locationchr3:784456..786819 -

Link to JBrowse

Properties
Property NameValue
DescriptionWd repeat protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:784456..786819 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR001680WD40_repeat
Homology
BLAST of NO03G02770 vs. NCBI_GenBank
Match: CCI46596.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 233.8 bits (595), Expect = 1.300e-57
Identity = 168/555 (30.27%), Postives = 250/555 (45.05%), Query Frame = 0
Query:    3 DDAPINVEQL-RFQVVDKDTGQVFRIDEMEQHININAYTLFPSRDELAQRLASSTAGQGGEDSDDESTSSPGSGLSAAGLSALSSMLGFTKRKSVQRQDTIEGQVRVSTVKKDGPDFGDLKVSQCLQAHDGPIWTMKFSLRGEFLASAGQSGVVYVWTVGGAGPSGAGGGEEAPVTDEASVSADVIKLLRLSPHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARAECLHVYPHVDCVTSVHFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEWANTPDMITAACFNPEGTMAVAGLYRGQVFFYQA---EGMKYYTQVECRNRHGALKGGKKVTGLCYDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLRLYQTEDYSMLCKYKGLTNDHMQIKATFSEDGEYVISGSENGQIYIWKGTTPQQGAAGGLAGLSAPLTFKKDRNTAYEFFPATEIGGANPPIVSVALFVPAA--AVMQSLKGTRHEEQWVGVGAGAAVSKMIIAADYSGKIRVFQ 552
            DD     E++ R+ V + DTG+++ I +++    +  Y++FP+ D ++             DS+ ++ S P           L   L F KR   + ++     V V   KK+  DF ++ + Q L +H+G IWTM+FS  G  LA+ GQ  ++ +W V            +  VT+         K + ++P + ++ H   ++D+SW++ NF+LSAS+DKTVRLWH +R +CLHV+ H D V +VHFHPK                                             A+ GL  GQ  FYQ    + M YYTQ+ECRN  G +K G+KVTG+ +D                                                              SR+RL+  ++YS +CKYKGL NDH+QIK  FS+DG+YVI GSENG +YIW   T            S   + K DRN +YE+F A E   +   IV+VALF PA+  A+++S   T  + Q          + +I+ A Y G I  F+
Sbjct:  597 DDTKHQDEKMDRYTVKNNDTGEIYDIRKIDP--QMETYSMFPN-DFISLM-------NNPSDSNKQTKSRP----------PLRIGLKFGKRG--KTRELKRNHVAVLASKKEKRDFQEMVLIQKLCSHNGTIWTMQFSCDGSHLATGGQDTILRLWKV------------QMSVTESNERRTGCDKQI-VAPAQVYQGHRMPIVDISWSRSNFILSASMDKTVRLWHISREDCLHVFQHPDSVPAVHFHPKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRAIVGLLNGQCIFYQVNAHQQMNYYTQIECRNSRGPMKKGRKVTGIEFDPE--------------------------------------------------GKCFMVSTNDSRMRLFSVDNYSRVCKYKGLLNDHLQIKGRFSQDGDYVICGSENGNVYIWNKQT--------FLSSSLMKSGKHDRNASYEYFCAAE---STNGIVTVALFAPASAHAMVKSKLDTYAQHQ--------ECTGLIVTASYDGCINFFE 1047          
BLAST of NO03G02770 vs. NCBI_GenBank
Match: OAO12743.1 (hypothetical protein AV274_5566 [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 233.8 bits (595), Expect = 1.300e-57
Identity = 137/392 (34.95%), Postives = 193/392 (49.23%), Query Frame = 0
Query:   67 ESTSSPGSGLSAAGLSALSSMLGF--TKRKSVQRQDTIEGQVRVSTVKKDGPDFGDLKVSQCLQAHDGPIWTMKFSLRGEFLASAGQSGVVYVWTVGGAGPSGAGGGEEAPVTDEASVSADVIKLLRLSPHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARAECLHVYPHVDCVTSVHFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEWANTPDMITAACFNPEGTMAVAGLYRGQVFFYQAEGMKYYTQVECRNRHGALKGGKKVTGLCYDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLRLYQTEDYSMLCKYKGLTNDHMQIKATFSEDGEYVISGSENGQIYIWK 457
            E+ S   S  S    S   S LG+  T   S  +QD IE    V TVKK   + GDL + Q L+ H   IWTMKFS   ++LA+ G+ GVV +W V               VT E       +++    P R +  HT+ ++D +W+K  FLLSAS+D TVRLWH     CL ++ H D VTSV F+P+ +  F+SG  D+KLRVW++  G V +W   P +IT   F P G +  AGL  GQV FY ++G++Y+TQ+ECRNRHG  K G+KVTG+ +                                                               SRLR+   + +S+  K+KG  N   Q+KA+ S D +Y+  GS+NG++Y+W+
Sbjct:    5 ETISEEYSDDSLNDYSDSDSELGYDLTPTASGSQQDAIE----VKTVKKAWSELGDLHLCQELRHHQNAIWTMKFSCDRKYLATGGEDGVVNIWKV-------------RKVTKEEWKENMDVRIFEDQPVRSYTGHTSHIVDFAWSKNGFLLSASLDCTVRLWHPDYDNCLCIFKHKDMVTSVDFYPEEEAYFISGCMDRKLRVWSIPQGCVLKWTQAPSVITTVTFCPGGRLCAAGLSDGQVIFYYSDGLRYFTQMECRNRHGKDKAGRKVTGISF------------------------------------------------LVKEKRQYMLVTTNDSRLRVMSLDTFSITTKFKGHVNRSRQLKASLSSDRKYIACGSDNGRVYLWR 331          
BLAST of NO03G02770 vs. NCBI_GenBank
Match: ETP36007.1 (hypothetical protein F442_15941 [Phytophthora parasitica P10297])

HSP 1 Score: 233.4 bits (594), Expect = 1.700e-57
Identity = 166/556 (29.86%), Postives = 248/556 (44.60%), Query Frame = 0
Query:    7 INVEQLRFQVVDKDTGQVFRIDEMEQHININAYTLFPSRDELAQRLASSTAGQGGEDSDDESTSSPGSGLSAAGLSALSSMLGFTKRKSVQRQDTIEGQVRVSTVKKDGPDFGDLKVSQCLQAHDGPIWTMKFSLRGEFLASAGQSGVVYVWTVGGAGPSGAGGGEEAPVTDEASVSADVIKLLRLSPHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARAECLHVYPHVDCVTSVHFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEWANTPDMITAACFNPEGTMAVAGLYRGQVFFYQA---EGMKYYTQVECRNRHGALKGGKKVTGLCYDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLRLYQTEDYSMLCKYKGLTNDHMQIKATFSEDGEYVISGSENGQIYIWKGTTPQQGAAGGLAGLSAPLTFKKDRNTAYEFFPATEIGGANPP--IVSVALFVPAAAVMQSLKGTRHEEQWVGVGAGAAVSKMIIAADYSGKIRVFQRHSLTV 558
            I+ +  ++ V +KDTG+VF I ++   +  ++Y++FP+     Q           E++    T  P          +++ ++     KS  ++ T    V V++ KK+  D  DL ++Q L  H G IWTMKFS  G  L S GQ  ++ VW V           E+A +  E    +D   +L   P R ++ HT  ++D+SW++ NF+LSAS+DKTVRLWH +R +CLHV+ H D                                                       A+ GL  GQ  FYQ    + M YYTQ+ECRN  G+++ G+KVTG+ +D                                                              SR+RL+  ++YS +CKYKGL N H+QIK  FS+DG++VI GSENG +Y+W         A  L  +S   + K+DRN++YEFF A E     PP  IV+VALF P A+    +K        V      A + +I++A Y G I+ F+R + +V
Sbjct:   85 IDPDDSKYIVKNKDTGEVFDIRDLSS-MPADSYSIFPNDFVAPQE----------EEAKRTRTRRP----------SITKIMAKFPIKSKTKEPTKRNHVPVTSCKKEKRDLEDLCLAQTLSKHTGTIWTMKFSHDGARLVSGGQDAILRVWKV------QISSEEDAKLARE----SDEKHILDAEPERSYQGHTMPIVDVSWSRSNFILSASMDKTVRLWHISREDCLHVFHHPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAIVGLLNGQCIFYQVNSHQQMNYYTQLECRNSRGSMRKGRKVTGIEFDPE--------------------------------------------------GKYFLVSTNDSRMRLFSVDNYSRICKYKGLVNGHLQIKGRFSQDGDFVICGSENGSVYVW-------NKARYLRSMSIVKSSKQDRNSSYEFFTAAE-----PPNGIVTVALFAP-ASTFAMVKSKLEASDDVNTN---ACTGLIVSASYDGCIKFFERSAKSV 543          
BLAST of NO03G02770 vs. NCBI_GenBank
Match: XP_024582792.1 (WD40 repeat-containing protein [Plasmopara halstedii] >CEG46423.1 WD40 repeat-containing protein [Plasmopara halstedii])

HSP 1 Score: 231.5 bits (589), Expect = 6.600e-57
Identity = 166/547 (30.35%), Postives = 250/547 (45.70%), Query Frame = 0
Query:   13 RFQVVDKDTGQVFRIDEMEQHININAYTLFPSRDELAQRLASSTAGQGGEDSDDESTSSPGSGLSAAGLSALSSMLGFTKRKSVQRQDTIEGQVRVSTVKKDGPDFGDLKVSQCLQAHDGPIWTMKFSLRGEFLASAGQSGVVYVWTVGGAGPSGAGGGEEAPVTDEASVSADVIKLLRLSPHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARAECLHVYPHVDCVTSVHFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEWANTPDMITAACFNPEGTMAVAGLYRGQVFFYQA---EGMKYYTQVECRNRHGALKGGKKVTGLCYDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLRLYQTEDYSMLCKYKGLTNDHMQIKATFSEDGEYVISGSENGQIYIWKGTTPQQGAAGGLAGLSAPLTFKKDRNTAYEFFPATEIGGANPP--IVSVALFVPAA--AVMQSLKGTRHEEQWVGVGAGAAVSKMIIAADYSGKIRVFQR 553
            ++ V +KDTG+VF I ++   +  N+Y++FP+ D LA            ++ D + T S           +L+ ++     KS  ++      V V++ KK+  +F D+ ++Q +  H G IWT+KFS  G  L S GQ  V+ VW V           E+A +  E    +D  ++L   P R ++ HT  ++D+SW++ NF+LSAS+DKT+RLWH +R +CLHV+ H D                                                     T AV GL  GQ  FYQ    + M YYTQ+ECRN  G+++ G+KVTG+ +D                                                              SR+RL+  ++YS +CKYKGL N H+QIK  FS+DG++VI GSENG +Y+W         A  L  +S   + K DRN++YE F A     A+PP  IV+VALF PA+  A+++S    R +          A + +I++A Y G I+ F+R
Sbjct:   66 KYIVKNKDTGEVFDIRDLAS-MPANSYSIFPN-DFLAP-----------QEEDVKRTKS--------RRPSLTKIMSKFPMKSKVKEPLKRNHVPVTSFKKEKREFEDISLAQTISKHIGTIWTIKFSHDGARLVSGGQDAVLRVWRV------QISSDEDAKLAKE----SDEKQILDTEPERSYQGHTMPIVDVSWSRSNFILSASMDKTIRLWHISREDCLHVFHHPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRAVVGLLNGQCIFYQVNSHQQMNYYTQIECRNSRGSMRKGRKVTGIEFDPE--------------------------------------------------GKYFLVSTNDSRMRLFSVDNYSRICKYKGLVNGHLQIKGRFSQDGDFVICGSENGSVYVW-------NKARYLRSMSIVKSSKHDRNSSYESFSA-----ADPPNGIVTVALFAPASTFAMVKSKLEARDDVN------SNACTGLIVSASYDGCIKFFER 513          
BLAST of NO03G02770 vs. NCBI_GenBank
Match: OQR76263.1 (WD repeat-containing protein 44-like [Tropilaelaps mercedesae])

HSP 1 Score: 231.5 bits (589), Expect = 6.600e-57
Identity = 161/486 (33.13%), Postives = 220/486 (45.27%), Query Frame = 0
Query:  105 QVRVSTVKKD-GPDFGDLKVSQCLQ-AHDGPIWTMKFSLRGEFLASAGQSGVVYVWTVGGA----------GPSGAG-----------------------GGEEAPVTDEASVSADVIKLLRLSPHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARAECLHVYPHVDCVTSVHFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEW----ANTPDMITAACFNPEGTMAVAGLYRGQVFFYQAEGMKYYTQVECRNRHGALKGGKKVTGLCYDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLRLYQTEDYSMLCKYKGLTNDHMQIKATFSEDGEYVISGSENGQIYIWKGTTPQQGAAGGLAGLSAPLTFKKDRNTAYEFFPATEIGGANPPIVSVALFVPAAAVMQSLKGTRHEEQWV--GVGAGAAVSKMIIAADYSGKIRV 550
            +++V+T  K+   DF  ++  Q L+  H G +WTMKFS  G  LASAGQ  VV  W +  A            S  G                       G EEA         A+        P   +  HTADV+D+SW+K NF+LS+S+DKTVRLWH +RAECL V+ HV+ VT++ FHP+ D  FLSG+ D KLR+WN+ D +V  W         +IT A F   G  AV G Y G+  FY  + +KYYTQ+  R+  G    GKK++G+                                                                 SR+RLY   D S+ CKY+GL N   QIKATFS DG YVISGSEN   YIWK               SA  + ++DRN  +E     E        V+ A+F P   ++      + E+  +   V + +A + +I++AD+ G+IRV
Sbjct:  625 KIKVATSSKNQKSDFDGIREVQALKGVHQGAVWTMKFSQCGRLLASAGQDHVVRTWVLRDAFEHFNEMRRKSQSNTGRDREDSINENRDNNTSQISELSPGKEEAASCSGTESGAEERGPFMPQPFAEYEGHTADVLDVSWSKSNFILSSSMDKTVRLWHISRAECLCVFHHVEFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKKVHLWNELEGTHTKLITCANFCHNGKFAVVGSYDGRCVFYTTDQLKYYTQIAVRSSRGKNAQGKKISGI--------------------------------------------------EPMPGEDKILVTSNDSRIRLYDLRDLSLSCKYRGLVNSSSQIKATFSPDGRYVISGSENTFTYIWKTYNDH----------SAFSSARRDRNAFWENIKVHEAS------VTSAVFAPKPDIITK----QLEDSLIPPSVASESAKNYVIVSADFRGEIRV 1040          
BLAST of NO03G02770 vs. NCBI_GenBank
Match: XP_022646368.1 (WD repeat-containing protein 44-like isoform X1 [Varroa destructor] >XP_022646369.1 WD repeat-containing protein 44-like isoform X1 [Varroa destructor])

HSP 1 Score: 229.2 bits (583), Expect = 3.300e-56
Identity = 159/493 (32.25%), Postives = 226/493 (45.84%), Query Frame = 0
Query:  105 QVRVSTVKKD-GPDFGDLKVSQCLQA-HDGPIWTMKFSLRGEFLASAGQSGVVYVWTVGGA----------GPSGAGGGEEAPVTDEASVSADVIKLLRLS------------------------PHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARAECLHVYPHVDCVTSVHFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEW----ANTPDMITAACFNPEGTMAVAGLYRGQVFFYQAEGMKYYTQVECRNRHGALKGGKKVTGLCYDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLRLYQTEDYSMLCKYKGLTNDHMQIKATFSEDGEYVISGSENGQIYIWKGTTPQQGAAGGLAGLSAPLTFKKDRNTAYEFFPATEIGGANPPIVSVALFVPAAAVMQSLKGTRHEEQWV--GVGAGAAVSKMIIAADYSGKIRVFQRHSL 556
            +V+V+T  K+   DF  ++  Q L+  H G +WTMKFS  G  LASAGQ  +V VW +  A            +  G   E  + D    +A  ++ L  +                        P   +  HTADV+D+SW+K NF+LS+S+DKTVRLWH +RAECL V+ HV+ VT++ FHP+ D  FLSG+ D KLR+WN+ D +V  W         +IT A F   G  AV G Y G+  FY  + +KYYTQ+  R+  G    GKK++G+                                                                 SR+RLY   D ++ CKY+GL N   QIKATFS DG YVISGSEN   YIWK               SA  + ++DRN  +E     +        V+ A+F P   ++      + ++  V   V + +A + +I++AD+ G+I V   HS+
Sbjct:  560 KVKVTTSSKNQKSDFDGIREVQALKGIHQGAVWTMKFSQCGRLLASAGQDHIVRVWVLRDAFEHFNEVRRKSQANTGRDREDSINDNRDCNAGQLQDLLFAGNQEAGNSAGIELTVEDRGPFMPQPFAEYEGHTADVLDVSWSKSNFILSSSMDKTVRLWHISRAECLCVFHHVEFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKKVHLWNELEGTHTKLITCANFCQNGKFAVVGSYDGRCVFYTTDQLKYYTQIAVRSSRGKNAQGKKISGI--------------------------------------------------EPMPGEDKILVTSNDSRIRLYDLRDLTLSCKYRGLVNSSSQIKATFSPDGRYVISGSENMFTYIWKTYHDH----------SAFSSARRDRNAFWENIKVHDAS------VTSAVFAPKPDIITK----QLDDALVPPSVASESAKNYVIVSADFRGEIHVL-AHSM 981          
BLAST of NO03G02770 vs. NCBI_GenBank
Match: XP_022646371.1 (WD repeat-containing protein 44-like isoform X3 [Varroa destructor])

HSP 1 Score: 229.2 bits (583), Expect = 3.300e-56
Identity = 159/493 (32.25%), Postives = 226/493 (45.84%), Query Frame = 0
Query:  105 QVRVSTVKKD-GPDFGDLKVSQCLQA-HDGPIWTMKFSLRGEFLASAGQSGVVYVWTVGGA----------GPSGAGGGEEAPVTDEASVSADVIKLLRLS------------------------PHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARAECLHVYPHVDCVTSVHFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEW----ANTPDMITAACFNPEGTMAVAGLYRGQVFFYQAEGMKYYTQVECRNRHGALKGGKKVTGLCYDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLRLYQTEDYSMLCKYKGLTNDHMQIKATFSEDGEYVISGSENGQIYIWKGTTPQQGAAGGLAGLSAPLTFKKDRNTAYEFFPATEIGGANPPIVSVALFVPAAAVMQSLKGTRHEEQWV--GVGAGAAVSKMIIAADYSGKIRVFQRHSL 556
            +V+V+T  K+   DF  ++  Q L+  H G +WTMKFS  G  LASAGQ  +V VW +  A            +  G   E  + D    +A  ++ L  +                        P   +  HTADV+D+SW+K NF+LS+S+DKTVRLWH +RAECL V+ HV+ VT++ FHP+ D  FLSG+ D KLR+WN+ D +V  W         +IT A F   G  AV G Y G+  FY  + +KYYTQ+  R+  G    GKK++G+                                                                 SR+RLY   D ++ CKY+GL N   QIKATFS DG YVISGSEN   YIWK               SA  + ++DRN  +E     +        V+ A+F P   ++      + ++  V   V + +A + +I++AD+ G+I V   HS+
Sbjct:  500 KVKVTTSSKNQKSDFDGIREVQALKGIHQGAVWTMKFSQCGRLLASAGQDHIVRVWVLRDAFEHFNEVRRKSQANTGRDREDSINDNRDCNAGQLQDLLFAGNQEAGNSAGIELTVEDRGPFMPQPFAEYEGHTADVLDVSWSKSNFILSSSMDKTVRLWHISRAECLCVFHHVEFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKKVHLWNELEGTHTKLITCANFCQNGKFAVVGSYDGRCVFYTTDQLKYYTQIAVRSSRGKNAQGKKISGI--------------------------------------------------EPMPGEDKILVTSNDSRIRLYDLRDLTLSCKYRGLVNSSSQIKATFSPDGRYVISGSENMFTYIWKTYHDH----------SAFSSARRDRNAFWENIKVHDAS------VTSAVFAPKPDIITK----QLDDALVPPSVASESAKNYVIVSADFRGEIHVL-AHSM 921          
BLAST of NO03G02770 vs. NCBI_GenBank
Match: XP_022646370.1 (WD repeat-containing protein 44-like isoform X2 [Varroa destructor] >XP_022709247.1 WD repeat-containing protein 44-like isoform X1 [Varroa jacobsoni] >XP_022709248.1 WD repeat-containing protein 44-like isoform X1 [Varroa jacobsoni])

HSP 1 Score: 229.2 bits (583), Expect = 3.300e-56
Identity = 159/493 (32.25%), Postives = 226/493 (45.84%), Query Frame = 0
Query:  105 QVRVSTVKKD-GPDFGDLKVSQCLQA-HDGPIWTMKFSLRGEFLASAGQSGVVYVWTVGGA----------GPSGAGGGEEAPVTDEASVSADVIKLLRLS------------------------PHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARAECLHVYPHVDCVTSVHFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEW----ANTPDMITAACFNPEGTMAVAGLYRGQVFFYQAEGMKYYTQVECRNRHGALKGGKKVTGLCYDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLRLYQTEDYSMLCKYKGLTNDHMQIKATFSEDGEYVISGSENGQIYIWKGTTPQQGAAGGLAGLSAPLTFKKDRNTAYEFFPATEIGGANPPIVSVALFVPAAAVMQSLKGTRHEEQWV--GVGAGAAVSKMIIAADYSGKIRVFQRHSL 556
            +V+V+T  K+   DF  ++  Q L+  H G +WTMKFS  G  LASAGQ  +V VW +  A            +  G   E  + D    +A  ++ L  +                        P   +  HTADV+D+SW+K NF+LS+S+DKTVRLWH +RAECL V+ HV+ VT++ FHP+ D  FLSG+ D KLR+WN+ D +V  W         +IT A F   G  AV G Y G+  FY  + +KYYTQ+  R+  G    GKK++G+                                                                 SR+RLY   D ++ CKY+GL N   QIKATFS DG YVISGSEN   YIWK               SA  + ++DRN  +E     +        V+ A+F P   ++      + ++  V   V + +A + +I++AD+ G+I V   HS+
Sbjct:  557 KVKVTTSSKNQKSDFDGIREVQALKGIHQGAVWTMKFSQCGRLLASAGQDHIVRVWVLRDAFEHFNEVRRKSQANTGRDREDSINDNRDCNAGQLQDLLFAGNQEAGNSAGIELTVEDRGPFMPQPFAEYEGHTADVLDVSWSKSNFILSSSMDKTVRLWHISRAECLCVFHHVEFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKKVHLWNELEGTHTKLITCANFCQNGKFAVVGSYDGRCVFYTTDQLKYYTQIAVRSSRGKNAQGKKISGI--------------------------------------------------EPMPGEDKILVTSNDSRIRLYDLRDLTLSCKYRGLVNSSSQIKATFSPDGRYVISGSENMFTYIWKTYHDH----------SAFSSARRDRNAFWENIKVHDAS------VTSAVFAPKPDIITK----QLDDALVPPSVASESAKNYVIVSADFRGEIHVL-AHSM 978          
BLAST of NO03G02770 vs. NCBI_GenBank
Match: XP_022709249.1 (WD repeat-containing protein 44-like isoform X2 [Varroa jacobsoni])

HSP 1 Score: 229.2 bits (583), Expect = 3.300e-56
Identity = 159/493 (32.25%), Postives = 226/493 (45.84%), Query Frame = 0
Query:  105 QVRVSTVKKD-GPDFGDLKVSQCLQA-HDGPIWTMKFSLRGEFLASAGQSGVVYVWTVGGA----------GPSGAGGGEEAPVTDEASVSADVIKLLRLS------------------------PHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARAECLHVYPHVDCVTSVHFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEW----ANTPDMITAACFNPEGTMAVAGLYRGQVFFYQAEGMKYYTQVECRNRHGALKGGKKVTGLCYDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLRLYQTEDYSMLCKYKGLTNDHMQIKATFSEDGEYVISGSENGQIYIWKGTTPQQGAAGGLAGLSAPLTFKKDRNTAYEFFPATEIGGANPPIVSVALFVPAAAVMQSLKGTRHEEQWV--GVGAGAAVSKMIIAADYSGKIRVFQRHSL 556
            +V+V+T  K+   DF  ++  Q L+  H G +WTMKFS  G  LASAGQ  +V VW +  A            +  G   E  + D    +A  ++ L  +                        P   +  HTADV+D+SW+K NF+LS+S+DKTVRLWH +RAECL V+ HV+ VT++ FHP+ D  FLSG+ D KLR+WN+ D +V  W         +IT A F   G  AV G Y G+  FY  + +KYYTQ+  R+  G    GKK++G+                                                                 SR+RLY   D ++ CKY+GL N   QIKATFS DG YVISGSEN   YIWK               SA  + ++DRN  +E     +        V+ A+F P   ++      + ++  V   V + +A + +I++AD+ G+I V   HS+
Sbjct:  497 KVKVTTSSKNQKSDFDGIREVQALKGIHQGAVWTMKFSQCGRLLASAGQDHIVRVWVLRDAFEHFNEVRRKSQANTGRDREDSINDNRDCNAGQLQDLLFAGNQEAGNSAGIELTVEDRGPFMPQPFAEYEGHTADVLDVSWSKSNFILSSSMDKTVRLWHISRAECLCVFHHVEFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKKVHLWNELEGTHTKLITCANFCQNGKFAVVGSYDGRCVFYTTDQLKYYTQIAVRSSRGKNAQGKKISGI--------------------------------------------------EPMPGEDKILVTSNDSRIRLYDLRDLTLSCKYRGLVNSSSQIKATFSPDGRYVISGSENMFTYIWKTYHDH----------SAFSSARRDRNAFWENIKVHDAS------VTSAVFAPKPDIITK----QLDDALVPPSVASESAKNYVIVSADFRGEIHVL-AHSM 918          
BLAST of NO03G02770 vs. NCBI_GenBank
Match: OQS02252.1 (hypothetical protein THRCLA_05359 [Thraustotheca clavata])

HSP 1 Score: 227.6 bits (579), Expect = 9.500e-56
Identity = 167/545 (30.64%), Postives = 241/545 (44.22%), Query Frame = 0
Query:   14 FQVVDKDTGQVFRIDEMEQHININAYTLFPSRDELAQRLASSTAGQGGEDSDDESTSSPGSGLSAAGLSALSSMLGFTKRKSVQRQDTIEGQVRVSTVKKDGPDFGDLKVSQCLQAHDGPIWTMKFSLRGEFLASAGQSGVVYVWTVGGAGPSGAGGGEEAPVTDEASVSADVIKLLRLSPHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARAECLHVYPHVDCVTSVHFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEWANTPDMITAACFNPEGTMAVAGLYRGQVFFYQA---EGMKYYTQVECRNRHGALKGGKKVTGLCYDTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLRLYQTEDYSMLCKYKGLTNDHMQIKATFSEDGEYVISGSENGQIYIWKGTTPQQGAAGGLAGLSAPLTFKKDRNTAYEFFPATEIGGANPP--IVSVALFVPAAAVMQSLKGTRHEEQWVGVGAGAAVSKMIIAADYSGKIRVFQRH 554
            F V +KDTG+V+ I E++ H  ++ YT+FP   E           Q  EDS+++      +  S   L A   +    K K+V+  D +  QV  S   K+  +F  L + Q L  H G IWTMKFS  G  L + GQ  ++ VW V               +T++ +       L    P + ++ HT  ++D+SW++ NF+LSAS+DKTVRLWH ++ ECLHV+ H D                                                        V GL  GQ   YQ    + M YYTQ++CRN  GA + G+KVTG+ +                                                               SR+RL+  ++YS +CKYKGL N+++QIKA FS+DGE+VI GSENG +YIW  +  Q          ++ ++ K+DRN ++EFF A E     PP  +V+VALF PA+    +  G    +Q V V    A +  I++A Y G I+VFQRH
Sbjct:  355 FVVRNKDTGEVYDIRELDAH-PVDCYTIFPQNFE---------PPQDREDSNEQHIQGEKTKTS---LKARLRLTFKKKDKTVKANDNLGVQVGAS--NKENREFDSLSLVQTLSKHSGTIWTMKFSHDGARLVTGGQDAILRVWKVN--------------MTEKTTQHR---PLFLEQPDQSYQGHTMPIVDVSWSRSNFILSASMDKTVRLWHISKEECLHVFQHPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVGLLHGQCILYQVNNHQAMNYYTQIDCRNARGATRKGRKVTGIEFTPE--------------------------------------------------GKFFLVSTNDSRMRLFSVDNYSRVCKYKGLRNEYLQIKARFSQDGEHVICGSENGNVYIWNRSMAQHS--------TSFMSGKQDRNNSFEFFTAAE-----PPSGVVTVALFAPASTYALAPSGL-GPDQDVHV---EACTGYIVSASYDGCIKVFQRH 800          
The following BLAST results are available for this feature:
BLAST of NO03G02770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CCI46596.11.300e-5730.27unnamed protein product [Albugo candida][more]
OAO12743.11.300e-5734.95hypothetical protein AV274_5566 [Blastocystis sp. ... [more]
ETP36007.11.700e-5729.86hypothetical protein F442_15941 [Phytophthora para... [more]
XP_024582792.16.600e-5730.35WD40 repeat-containing protein [Plasmopara halsted... [more]
OQR76263.16.600e-5733.13WD repeat-containing protein 44-like [Tropilaelaps... [more]
XP_022646368.13.300e-5632.25WD repeat-containing protein 44-like isoform X1 [V... [more]
XP_022646371.13.300e-5632.25WD repeat-containing protein 44-like isoform X3 [V... [more]
XP_022646370.13.300e-5632.25WD repeat-containing protein 44-like isoform X2 [V... [more]
XP_022709249.13.300e-5632.25WD repeat-containing protein 44-like isoform X2 [V... [more]
OQS02252.19.500e-5630.64hypothetical protein THRCLA_05359 [Thraustotheca c... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL068nonsL068Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR001ncniR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR052ngnoR052Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005619NSK005619Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G02770.2NO03G02770.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO03G02770.1NO03G02770.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|667405gene_1468Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100124g3gene919Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G02770.2NO03G02770.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO03G02770.1NO03G02770.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G02770 ID=NO03G02770|Name=NO03G02770|organism=Nannochloropsis oceanica|type=gene|length=2364bp
AAACACAGGCCAGGCCCAATCTTCAGCGACCAGACTTGGCGTTTGTGGGA
GCTGCCAGGTGATTCGATACAAAAAAAAACAGCGGCAGGTGTCCATCTCC
GACCAGGTTACAGCTGCAACAGCAGAAGGCGGGAGTCATGGCGGACGATG
CGCCAATCAACGTGGAGCAGCTGCGCTTCCAGGTGGTCGACAAAGATACG
GGACAGGTCTTTCGCATCGACGAGATGGAGCAGCACATAAATATCAACGC
ATACACTCTCTTTCCGTCGCGGGACGAGCTTGCGCAGCGGCTAGCCTCCA
GCACAGCAGGGCAGGGAGGAGAAGACTCGGACGACGAGTCAACGTCTTCC
CCAGGAAgtaagtagtgatgcgtgaatagtaacgttgcctctctatttgc
caaagcgatgtatgttatgaattccgaccttcttcactgatgtggtagaa
agcttgtcgctggggatatcgcagcttatctctcacagccccctttgccc
ttcatcgttcaagtgcacatgcttctctgctcacgacactcctcactcta
ttcacatccacttttgcccgcaattactcagGTGGCCTGTCGGCAGCAGG
ACTGTCCGCCTTGTCATCTATGCTGGGATTCACCAAGCGAAAGAGCGTAC
AGCGGCAGGACACGATCGAAGGGCAAGTGCGCGTGAGCACCGTCAAGAAG
GATGGTCCGGACTTTGGGGACCTGAAGGTCTCTCAGTGCTTGCAGgtgcg
tactttcttgcttttgcatctcttctttccgaacccctcaacccctttca
acttggccatttcttctcttacccacctattcttctcctctgtccttacc
tcacgagGCGCACGACGGGCCCATCTGGACGATGAAGTTCAGTTTGCGGG
GAGAGTTTTTGGCTTCAGCAGGACAAAGTGGAGTGGTGTATGTGTGGACG
GTAGGTGGCGCGGGGCCCTCAGGTGCTGGGGGAGGAGAGGAGGCACCTGT
GACGGACGAAGCAAGTGTGAGCGCGGATGTCATCAAGCTGTTGCGTCTGT
CGCCCCACCGGCGATTCCGTGATCACACTGCCGACGTGATTGATCTGTCG
TGGAACAAAGAGAATTTTCTGCTTTCGGCATCAATTGACAAGACCGTGCG
GCTGTGGCACACGGCCCGAGCGGAGTGTTTGCATGTCTACCCGCACGTGG
ACTGCGTCACCTCTGTGCATTTTCACCCCAAGATCGACCATTTGTTTTTA
TCGGGCAATTTTGATAAAAAGCTGCGTGTCTGGAATGTGACCGACGGGCG
GGTCAAGGAGTGGGCGAACACCCCCGACATGATTACAGCCGCCTGCTTCA
ACCCCGAGGGTACCATGGCCGTCGCCGGTCTTTATCGGGGCCAGGTATTT
TTTTATCAGGCGGAAGGCATGAAGTATTACACCCAAGTTGAATGCCGCAA
CCGCCATGGAGCCCTCAAGGGCGGCAAGAAAGTCACCGGCCTGTGCTACG
ACACTTCTTCCCAGCACAAGGCTGCTGCCGCTGCCGCCTCCCTATCCTCT
TTGTCCACATTCGGGCCATCAACCACAGGAGGGAATAACACAAATTCCTC
CTCCTCATCTTCCTCTAGCGTCGTCTCCTCCACGGGCATCCTAGCCGGCG
GGGCAGGCTCGGAACAACTTCTCATTACCACAAACGACTCGCGCCTCCGT
CTGTACCAAACCGAAGATTATTCCATGCTCTGCAAATACAAGGGCCTGAC
GAATGACCACATGCAGATCAAAGCCACTTTTAGTGAGGACGGGGAGTACG
TGATTTCTGGTTCTGAGAACGGACAGATATATATCTGGAAAGGCACCACT
CCGCAACAGGGAGCGGCGGGAGGGCTGGCTGGTTTGAGCGCTCCGCTTAC
CTTCAAGAAGGATCGGAACACAGCCTATGAGTTTTTCCCTGCCACGGAGA
TAGGTGGTGCAAATCCACCAATTGTTTCGGTGGCTCTGTTTGTGCCCGCA
GCCGCTGTGATGCAATCTTTGAAGGGGACGCGGCATGAGGAGCAATGGGT
GGGGGTGGGGGCGGGGGCAGCTGTGAGTAAGATGATCATTGCTGCGGATT
ACTCGGGCAAGATTCGCGTGTTCCAGCGGCATTCCCTGACTGTAGGAAGT
AGTGGGGGAACTAGTCCTGTGAAGACGGCATGAGAAAGGGGAATGGGAAT
GTATTAAGAACACCTGAGAAGAAGGGAGCGCTTGATCGGCGGGCATGTAT
GCATATGCATGGCAAGGTCAGACACACAGGGCTTTTATTTTGGTGGTTTT
AAGGCATCTTCGCGAGGGATGTTGATTTCAGAACGACACAACAAAGCAAT
ATACACCGGAAAGA
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protein sequence of NO03G02770.2

>NO03G02770.2-protein ID=NO03G02770.2-protein|Name=NO03G02770.2|organism=Nannochloropsis oceanica|type=polypeptide|length=434bp
MKFSLRGEFLASAGQSGVVYVWTVGGAGPSGAGGGEEAPVTDEASVSADV
IKLLRLSPHRRFRDHTADVIDLSWNKENFLLSASIDKTVRLWHTARAECL
HVYPHVDCVTSVHFHPKIDHLFLSGNFDKKLRVWNVTDGRVKEWANTPDM
ITAACFNPEGTMAVAGLYRGQVFFYQAEGMKYYTQVECRNRHGALKGGKK
VTGLCYDTSSQHKAAAAAASLSSLSTFGPSTTGGNNTNSSSSSSSSVVSS
TGILAGGAGSEQLLITTNDSRLRLYQTEDYSMLCKYKGLTNDHMQIKATF
SEDGEYVISGSENGQIYIWKGTTPQQGAAGGLAGLSAPLTFKKDRNTAYE
FFPATEIGGANPPIVSVALFVPAAAVMQSLKGTRHEEQWVGVGAGAAVSK
MIIAADYSGKIRVFQRHSLTVGSSGGTSPVKTA*
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protein sequence of NO03G02770.1

>NO03G02770.1-protein ID=NO03G02770.1-protein|Name=NO03G02770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=570bp
MADDAPINVEQLRFQVVDKDTGQVFRIDEMEQHININAYTLFPSRDELAQ
RLASSTAGQGGEDSDDESTSSPGSGLSAAGLSALSSMLGFTKRKSVQRQD
TIEGQVRVSTVKKDGPDFGDLKVSQCLQAHDGPIWTMKFSLRGEFLASAG
QSGVVYVWTVGGAGPSGAGGGEEAPVTDEASVSADVIKLLRLSPHRRFRD
HTADVIDLSWNKENFLLSASIDKTVRLWHTARAECLHVYPHVDCVTSVHF
HPKIDHLFLSGNFDKKLRVWNVTDGRVKEWANTPDMITAACFNPEGTMAV
AGLYRGQVFFYQAEGMKYYTQVECRNRHGALKGGKKVTGLCYDTSSQHKA
AAAAASLSSLSTFGPSTTGGNNTNSSSSSSSSVVSSTGILAGGAGSEQLL
ITTNDSRLRLYQTEDYSMLCKYKGLTNDHMQIKATFSEDGEYVISGSENG
QIYIWKGTTPQQGAAGGLAGLSAPLTFKKDRNTAYEFFPATEIGGANPPI
VSVALFVPAAAVMQSLKGTRHEEQWVGVGAGAAVSKMIIAADYSGKIRVF
QRHSLTVGSSGGTSPVKTA*
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Synonyms
Publications