NO03G02450, NO03G02450 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G02450 vs. NCBI_GenBank
Match: XP_005855920.1 (isochorismatase hydrolase, partial [Nannochloropsis gaditana CCMP526] >EKU20441.1 isochorismatase hydrolase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 317.0 bits (811), Expect = 4.900e-83 Identity = 155/212 (73.11%), Postives = 180/212 (84.91%), Query Frame = 0 Query: 9 AAAPPLDKASDLASNIAGVFDGHLTPGIRPCLLIIDMVQAYLRPESPIYAGIEDALASTTRLLHQARCLGVPVIHTNVEFIPGGLNGGVFFRKIPLLRIFQEGSPLGAFHPDLAPLAHEVVVTKQYASAFFGTSLASTLTAQGIDTVLIAGVSTSGCVRATATDACQHGFIPIVVRDAVGDRHVQVHEANLFDLQAKYAEVLSEVDVSKYLE 221 AAA L+K LA NI GVFDG L PG RPCLLIID VQAYL+ +SP+YAG+EDALAST RLL AR +PV+HT VEF+PGGL+GG+FFRK+PLL+IF++GSP+G FHPD+ PL +EV+VTKQYASAFFGTSLA TL AQG+DTVLIAG+STSGCVRATATDACQHGFIPIVV DAVGDRH QVHE+NLFD++AKYAEV E S Y++ Sbjct: 34 AAASGLNKEGSLADNIRGVFDGALQPGARPCLLIIDFVQAYLKKDSPLYAGVEDALASTKRLLALARRQRLPVVHTRVEFLPGGLDGGIFFRKLPLLKIFEKGSPMGNFHPDVMPLPNEVIVTKQYASAFFGTSLAPTLRAQGVDTVLIAGLSTSGCVRATATDACQHGFIPIVVEDAVGDRHNQVHESNLFDIKAKYAEVWDEEAASMYIK 245
BLAST of NO03G02450 vs. NCBI_GenBank
Match: EWM29687.1 (n-carbamoylsarcosine amidase [Nannochloropsis gaditana]) HSP 1 Score: 317.0 bits (811), Expect = 4.900e-83 Identity = 155/212 (73.11%), Postives = 180/212 (84.91%), Query Frame = 0 Query: 9 AAAPPLDKASDLASNIAGVFDGHLTPGIRPCLLIIDMVQAYLRPESPIYAGIEDALASTTRLLHQARCLGVPVIHTNVEFIPGGLNGGVFFRKIPLLRIFQEGSPLGAFHPDLAPLAHEVVVTKQYASAFFGTSLASTLTAQGIDTVLIAGVSTSGCVRATATDACQHGFIPIVVRDAVGDRHVQVHEANLFDLQAKYAEVLSEVDVSKYLE 221 AAA L+K LA NI GVFDG L PG RPCLLIID VQAYL+ +SP+YAG+EDALAST RLL AR +PV+HT VEF+PGGL+GG+FFRK+PLL+IF++GSP+G FHPD+ PL +EV+VTKQYASAFFGTSLA TL AQG+DTVLIAG+STSGCVRATATDACQHGFIPIVV DAVGDRH QVHE+NLFD++AKYAEV E S Y++ Sbjct: 2 AAASGLNKEGSLADNIRGVFDGALQPGARPCLLIIDFVQAYLKKDSPLYAGVEDALASTKRLLALARRQRLPVVHTRVEFLPGGLDGGIFFRKLPLLKIFEKGSPMGNFHPDVMPLPNEVIVTKQYASAFFGTSLAPTLRAQGVDTVLIAGLSTSGCVRATATDACQHGFIPIVVEDAVGDRHNQVHESNLFDIKAKYAEVWDEEAASMYIK 213
BLAST of NO03G02450 vs. NCBI_GenBank
Match: WP_067911433.1 (isochorismatase [Novosphingobium fuchskuhlense] >KUR70756.1 isochorismatase [Novosphingobium fuchskuhlense]) HSP 1 Score: 273.5 bits (698), Expect = 6.200e-70 Identity = 131/208 (62.98%), Postives = 165/208 (79.33%), Query Frame = 0 Query: 18 SDLASNIAGVFDGHLTPGIRPCLLIIDMVQAYLRPESPIYAGIEDALASTTRLLHQARCLGVPVIHTNVEFIPGGLNGGVFFRKIPLLRIFQEGSPLGAFHPDLAPLAHEVVVTKQYASAFFGTSLASTLTAQGIDTVLIAGVSTSGCVRATATDACQHGFIPIVVRDAVGDRHVQVHEANLFDLQAKYAEVLSEVDVSKYLEELAVK 226 +DL+ N AG FDG L G RP +++IDMV+AYL+P SP+YAG+EDA+AS RL+ AR +G PV+ TNVE+ PGG +GGVFFRK+P L +FQ+GSPLGAF P L+P + V+TK+YASAFF T LA+TLT+ G+DT++IAGVSTSGCVRATA DACQ+GF+P VVRDA GDRH HEANLFDLQAKYAEV+SE + + + A + Sbjct: 6 ADLSGNYAGAFDGSLPFGARPAVIVIDMVEAYLQPGSPLYAGVEDAVASAARLVAAARQIGAPVLFTNVEYQPGGADGGVFFRKVPALAVFQKGSPLGAFPPQLSPADRDFVITKRYASAFFATHLAATLTSLGVDTLVIAGVSTSGCVRATALDACQNGFLPFVVRDACGDRHAAPHEANLFDLQAKYAEVVSEARLLELMAATATR 213
BLAST of NO03G02450 vs. NCBI_GenBank
Match: WP_067613278.1 (isochorismatase [Novosphingobium sp. FSW06-99] >KUR79751.1 isochorismatase [Novosphingobium sp. FSW06-99]) HSP 1 Score: 269.6 bits (688), Expect = 8.900e-69 Identity = 133/205 (64.88%), Postives = 156/205 (76.10%), Query Frame = 0 Query: 17 ASDLASNIAGVFDGHLTPGIRPCLLIIDMVQAYLRPESPIYAGIEDALASTTRLLHQARCLGVPVIHTNVEFIPGGLNGGVFFRKIPLLRIFQEGSPLGAFHPDLAPLAHEVVVTKQYASAFFGTSLASTLTAQGIDTVLIAGVSTSGCVRATATDACQHGFIPIVVRDAVGDRHVQVHEANLFDLQAKYAEVLSEVDVSKYLEE 222 ASDLA+N AG FDGHL G RP L+++DMV AYL P+SP+YAGIE AL S R+ R G PVI TNVE+ PGG +GGVFFRK+P LR F+ G+PLGAF LAP E+V+TK+YASAFF T LA+TLTA IDT++I G STSGC+RATA DACQHGFIP VVR+A GDRH HEANLFDLQAKYAEV+ E D+ L + Sbjct: 4 ASDLAANYAGAFDGHLAFGQRPALIVVDMVDAYLVPQSPLYAGIESALESAIRVTQAVRACGHPVIFTNVEYAPGGADGGVFFRKVPALRCFERGNPLGAFPARLAPRDGELVITKRYASAFFATHLAATLTALRIDTLIICGTSTSGCIRATALDACQHGFIPFVVREACGDRHAAPHEANLFDLQAKYAEVVGEPDILTLLAQ 208
BLAST of NO03G02450 vs. NCBI_GenBank
Match: WP_011443836.1 (MULTISPECIES: isochorismatase [Novosphingobium] >ABD24622.1 isochorismatase hydrolase [Novosphingobium aromaticivorans DSM 12444] >SCY22571.1 Nicotinamidase-related amidase [Novosphingobium stygium]) HSP 1 Score: 268.5 bits (685), Expect = 2.000e-68 Identity = 130/201 (64.68%), Postives = 157/201 (78.11%), Query Frame = 0 Query: 19 DLASNIAGVFDGHLTPGIRPCLLIIDMVQAYLRPESPIYAGIEDALASTTRLLHQARCLGVPVIHTNVEFIPGGLNGGVFFRKIPLLRIFQEGSPLGAFHPDLAPLAHEVVVTKQYASAFFGTSLASTLTAQGIDTVLIAGVSTSGCVRATATDACQHGFIPIVVRDAVGDRHVQVHEANLFDLQAKYAEVLSEVDVSKYL 220 DLA+N AG FDG L G P L+++D+V+AYL+P SP+YAGIE AL S RL AR G+PVI TNVE+ PGG +GGVF+RK+P LR+F++GSPLGAF L+P E+V+TK+YASAFF T LASTLT+ G+DTVLI G STSGC+RATA DACQHGF+P VVRDA GDRH HEANLFDLQAKYAEV+ E + +L Sbjct: 7 DLAANYAGAFDGRLPFGQCPALVVVDLVEAYLQPGSPLYAGIEAALESAVRLTDAARNAGIPVIFTNVEYQPGGTDGGVFYRKVPALRVFEKGSPLGAFPAVLSPREDEIVITKRYASAFFATHLASTLTSLGVDTVLICGTSTSGCIRATALDACQHGFLPFVVRDACGDRHQAPHEANLFDLQAKYAEVIGEAEALAFL 207
BLAST of NO03G02450 vs. NCBI_GenBank
Match: WP_107715395.1 (MULTISPECIES: isochorismatase [Novosphingobium] >PTM85189.1 maleamate amidohydrolase [Novosphingobium sp. GV064] >PTR13302.1 maleamate amidohydrolase [Novosphingobium sp. GV055] >PUB07521.1 maleamate amidohydrolase [Novosphingobium sp. GV061] >PUB23334.1 maleamate amidohydrolase [Novosphingobium sp. GV079] >PUB45098.1 maleamate amidohydrolase [Novosphingobium sp. GV027]) HSP 1 Score: 268.1 bits (684), Expect = 2.600e-68 Identity = 130/196 (66.33%), Postives = 157/196 (80.10%), Query Frame = 0 Query: 17 ASDLASNIAGVFDGHLTPGIRPCLLIIDMVQAYLRPESPIYAGIEDALASTTRLLHQARCLGVPVIHTNVEFIPGGLNGGVFFRKIPLLRIFQEGSPLGAFHPDLAPLAHEVVVTKQYASAFFGTSLASTLTAQGIDTVLIAGVSTSGCVRATATDACQHGFIPIVVRDAVGDRHVQVHEANLFDLQAKYAEVLSE 213 A DL +N AG FDG L G RP LL++D+V+AYL+P SP+YAGIE ALAS R+ AR G+PVI TNVE+ PGG +GGVF+RK+P L++F++GSPLGAF L+P A +VV+TK+YASAFF T LA+TLTA G+DTVLI G STSGC+RATA DACQHGF+P VV DA GDRH HEANLFDLQAKYAEV++E Sbjct: 5 AGDLDANYAGAFDGRLPFGQRPALLLVDLVEAYLQPGSPLYAGIEAALASAVRITAAARAAGLPVIFTNVEYQPGGADGGVFYRKVPALKVFEKGSPLGAFPAVLSPQAGDVVITKRYASAFFATHLAATLTAMGVDTVLICGTSTSGCIRATALDACQHGFLPFVVADACGDRHPAPHEANLFDLQAKYAEVVNE 200
BLAST of NO03G02450 vs. NCBI_GenBank
Match: OYU33706.1 (isochorismatase [Novosphingobium sp. PASSN1]) HSP 1 Score: 267.7 bits (683), Expect = 3.400e-68 Identity = 132/207 (63.77%), Postives = 160/207 (77.29%), Query Frame = 0 Query: 19 DLASNIAGVFDGHLTPGIRPCLLIIDMVQAYLRPESPIYAGIEDALASTTRLLHQARCLGVPVIHTNVEFIPGGLNGGVFFRKIPLLRIFQEGSPLGAFHPDLAPLAHEVVVTKQYASAFFGTSLASTLTAQGIDTVLIAGVSTSGCVRATATDACQHGFIPIVVRDAVGDRHVQVHEANLFDLQAKYAEVLSEVDVSKYLEELAVK 226 ++ +N G FDG L G RP L++IDMV+AYL+P SP+YAGIEDA+AS RL AR G PVI TNVE+ PGG +GGVFFRK+P L++F++GSPLGAF P L+P + V+TK+YASAFF T LA+TLT+ G+DT+LIAGVSTSGCVRATA D CQ GF+P VVRDA GDRH HEANLFDLQAKYAEV+SE + +L L K Sbjct: 7 EITANYTGAFDGSLPFGKRPALIVIDMVEAYLQPGSPLYAGIEDAVASAARLAAVARQCGAPVIFTNVEYQPGGADGGVFFRKVPALKVFEKGSPLGAFPPQLSPEDGDFVITKRYASAFFATHLAATLTSLGVDTLLIAGVSTSGCVRATALDTCQSGFLPFVVRDACGDRHPGPHEANLFDLQAKYAEVISEETATAHLMALRAK 213
BLAST of NO03G02450 vs. NCBI_GenBank
Match: WP_022678580.1 (MULTISPECIES: isochorismatase [Novosphingobium] >KPF54612.1 isochorismatase [Novosphingobium sp. AAP1]) HSP 1 Score: 266.5 bits (680), Expect = 7.500e-68 Identity = 130/195 (66.67%), Postives = 156/195 (80.00%), Query Frame = 0 Query: 17 ASDLASNIAGVFDGHLTPGIRPCLLIIDMVQAYLRPESPIYAGIEDALASTTRLLHQARCLGVPVIHTNVEFIPGGLNGGVFFRKIPLLRIFQEGSPLGAFHPDLAPLAHEVVVTKQYASAFFGTSLASTLTAQGIDTVLIAGVSTSGCVRATATDACQHGFIPIVVRDAVGDRHVQVHEANLFDLQAKYAEVLS 212 A DL +N AG FDG L G RP LL++D+V+AYL+P SP+YAGIE ALAS R+ AR G+PVI TNVE+ PGG +GGVF+RK+P L++F++GSPLGAF L+P A +VV+TK+YASAFF T LA+TLTA G+DTVLI G STSGC+RATA DACQHGF+P VV DA GDRH HEANLFDLQAKYAEV+S Sbjct: 5 AGDLDANYAGAFDGRLPFGQRPGLLLVDLVEAYLQPGSPLYAGIEAALASAVRITAAARAAGLPVIFTNVEYQPGGADGGVFYRKVPALKVFEKGSPLGAFPAVLSPQAGDVVITKRYASAFFATHLAATLTAMGVDTVLICGTSTSGCIRATALDACQHGFVPFVVADACGDRHPAPHEANLFDLQAKYAEVVS 199
BLAST of NO03G02450 vs. NCBI_GenBank
Match: WP_062783930.1 (isochorismatase [Novosphingobium capsulatum]) HSP 1 Score: 264.6 bits (675), Expect = 2.900e-67 Identity = 130/197 (65.99%), Postives = 155/197 (78.68%), Query Frame = 0 Query: 17 ASDLASNIAGVFDGHLTPGIRPCLLIIDMVQAYLRPESPIYAGIEDALASTTRLLHQARCLGVPVIHTNVEFIPGGLNGGVFFRKIPLLRIFQEGSPLGAFHPDLAPLAHEVVVTKQYASAFFGTSLASTLTAQGIDTVLIAGVSTSGCVRATATDACQHGFIPIVVRDAVGDRHVQVHEANLFDLQAKYAEVLSEV 214 A DL +N AG FDG L G RP LL++D+V+AYL+P SP+YAGIE AL S R+ AR G+PVI TNVE+ PGG +GGVF+RK+P L+ F++GSPLGAF LAP +VV+TK+YASAFF T LA+TLTA G+DTVLI G STSGC+RATA DACQHGF+P VV DA GDRH H+ANLFDLQAKYAEV+SEV Sbjct: 5 AGDLDANYAGAFDGRLPFGQRPGLLLVDLVEAYLQPGSPLYAGIESALESAVRITAAARAAGLPVIFTNVEYQPGGADGGVFYRKVPALKAFEKGSPLGAFPAVLAPQDGDVVITKRYASAFFATHLAATLTAMGVDTVLICGTSTSGCIRATALDACQHGFLPFVVADACGDRHPAPHQANLFDLQAKYAEVVSEV 201
BLAST of NO03G02450 vs. NCBI_GenBank
Match: WP_054122960.1 (isochorismatase [Novosphingobium sp. AAP93] >KPF80613.1 isochorismatase [Novosphingobium sp. AAP93]) HSP 1 Score: 260.0 bits (663), Expect = 7.000e-66 Identity = 127/202 (62.87%), Postives = 157/202 (77.72%), Query Frame = 0 Query: 19 DLASNIAGVFDGHLTPGIRPCLLIIDMVQAYLRPESPIYAGIEDALASTTRLLHQARCLGVPVIHTNVEFIPGGLNGGVFFRKIPLLRIFQEGSPLGAFHPDLAPLAHEVVVTKQYASAFFGTSLASTLTAQGIDTVLIAGVSTSGCVRATATDACQHGFIPIVVRDAVGDRHVQVHEANLFDLQAKYAEVLSEVDVSKYLE 221 ++A+N G FDG L G RP +++IDMV+AYL+P SP+YAGIE A+ S RL+ AR G PV TNVE+ PGG +GGVFFRK+P L++F++GSPLGAF P L+P + V+TK+YASAFF T LA+TLT+ G+DT+LI GVSTSGCVRATA DACQ GF+P VVRDA GDRH HEANLFDLQAKYAEV+SE +L+ Sbjct: 7 EIAANYTGAFDGSLPFGKRPAIIVIDMVEAYLQPGSPLYAGIEAAVESAARLVAVARQCGAPVFFTNVEYQPGGADGGVFFRKVPALKVFEKGSPLGAFPPQLSPEDGDFVITKRYASAFFATHLAATLTSLGVDTLLITGVSTSGCVRATALDACQSGFLPFVVRDACGDRHPGPHEANLFDLQAKYAEVVSEERAITHLQ 208 The following BLAST results are available for this feature:
BLAST of NO03G02450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G02450 ID=NO03G02450|Name=NO03G02450|organism=Nannochloropsis oceanica|type=gene|length=897bpback to top protein sequence of NO03G02450.1 >NO03G02450.1-protein ID=NO03G02450.1-protein|Name=NO03G02450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=233bpback to top Synonyms
Publications
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