NO03G02340, NO03G02340 (gene) Nannochloropsis oceanica

Overview
NameNO03G02340
Unique NameNO03G02340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1110
Alignment locationchr3:678218..679327 +

Link to JBrowse

Properties
Property NameValue
DescriptionChorismate mutase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:678218..679327 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0046417chorismate metabolic process
GO:0009073aromatic amino acid family biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004106chorismate mutase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036263Chorismate_II_sf
IPR008238Chorismate_mutase_AroQ_euk
Homology
BLAST of NO03G02340 vs. NCBI_GenBank
Match: POM80881.1 (Chorismate mutase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 238.0 bits (606), Expect = 4.600e-59
Identity = 128/259 (49.42%), Postives = 173/259 (66.80%), Query Frame = 0
Query:   99 MSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSI----PDYTFLNSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCK-EGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQD----ITGETEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGRP 349
            + LD  R+ LIRQE++IIFALIERAQF RN  +Y+        +       YT  +  S L+++LLETEKLH   RRYTSP+E+AFFP  LP PIL  + +P +L PN +++N QI+ +Y  +I+  +     DD  +GS+  ADI +LQA+S+RIH GKF+AEAKF     RY  L+ A+D DG+M  LTN AVE +VLER KLKASTYGQD     + + +E KV P +I+ +YRD ++PLTK+V+V YL +RV  P
Sbjct:   16 VKLDDFRNVLIRQEETIIFALIERAQFPRNPEVYVSMKESKSAAFGGLKGKYTTFDG-SLLDFMLLETEKLHALTRRYTSPDENAFFPHLLPEPILPIIDYPRVLNPNRININNQIMSVYQQKILPGLTTLASDDTAYGSTATADIAVLQALSKRIHFGKFIAEAKFQAETERYTQLILANDADGIMEALTNLAVEEKVLERVKLKASTYGQDPNAPASSDDKEMKVNPQLISDLYRDFVMPLTKEVQVQYLLQRVAHP 273          
BLAST of NO03G02340 vs. NCBI_GenBank
Match: POM81034.1 (Chorismate mutase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 236.9 bits (603), Expect = 1.000e-58
Identity = 128/259 (49.42%), Postives = 172/259 (66.41%), Query Frame = 0
Query:   99 MSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSI----PDYTFLNSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCK-EGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQD----ITGETEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGRP 349
            + LD  R+ LIRQE++IIFALIERAQF RN  +Y+        +       YT  +  S L+++LLETEKLH   RRYTSP+E+AFFP  LP PIL  + +P +L PN +++N QI+ +Y  +I+  +     DD  +GS+  ADI +LQA+S+RIH GKF+AEAKF     RY  L+ A+D DG+M  LTN AVE +VLER KLKASTYGQD     + + +E KV P  I+ +YRD ++PLTK+V+V YL +RV  P
Sbjct:   16 VKLDDFRNVLIRQEETIIFALIERAQFPRNPEVYVSMKESKSAAFGGLKGKYTTFDG-SLLDFMLLETEKLHALTRRYTSPDENAFFPHLLPEPILPIIDYPRVLNPNRININNQIMSVYQQKILPGLTTLASDDTAYGSTATADIAVLQALSKRIHFGKFIAEAKFQAETERYTQLILANDADGIMEALTNLAVEEKVLERVKLKASTYGQDPNAPASSDDKEMKVNPQPISDLYRDFVMPLTKEVQVQYLLQRVAHP 273          
BLAST of NO03G02340 vs. NCBI_GenBank
Match: XP_002907918.1 (chorismate mutase, putative [Phytophthora infestans T30-4] >EEY61001.1 chorismate mutase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 236.5 bits (602), Expect = 1.300e-58
Identity = 127/259 (49.03%), Postives = 173/259 (66.80%), Query Frame = 0
Query:   99 MSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSI----PDYTFLNSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAV-CKEGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQD----ITGETEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGRP 349
            + LD  R+ LIRQE+++IFALIER+QF RN  +Y+        +       YT  +  S L+++LLETEKLH   RRYTSP+E+AFFP  LP PIL  L +P +L PN +++N QI+ +Y  +I+  +     DD  +GS+  ADI +LQA+S+RIH GKF+AEAKF     RY  L+ A+D DG+M  LTN AVE +VLER KLKASTYGQD     + + +E KV P +I+ +YRD ++PLTK+V+V YL +RV  P
Sbjct:   16 VKLDDFRNVLIRQEETLIFALIERSQFPRNPEVYVSMKESKSAAFGGLKGKYTTFDG-SPLDFMLLETEKLHALTRRYTSPDENAFFPHLLPEPILPILDYPRVLNPNRININNQIMSVYQKKILPGLTTSASDDTAYGSTATADIAVLQALSKRIHFGKFIAEAKFQAETERYTKLILANDADGIMEALTNLAVEQKVLERVKLKASTYGQDPNAPASSDDKEMKVNPQLISGLYRDFVMPLTKEVQVQYLLQRVAHP 273          
BLAST of NO03G02340 vs. NCBI_GenBank
Match: XP_012199275.1 (hypothetical protein SPRG_05285 [Saprolegnia parasitica CBS 223.65] >KDO30094.1 hypothetical protein SPRG_05285 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 236.5 bits (602), Expect = 1.300e-58
Identity = 128/261 (49.04%), Postives = 183/261 (70.11%), Query Frame = 0
Query:   93 TTTADVMSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSIPDYT-FLNSL--SFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCKEGDDE-QHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQDITGETE----ECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERV 346
            TTT  V+ LD  R+ LIRQE++IIFALIERAQF RN+AIY +   +  PS+ ++    NS   SFL++LL  TEKLH   RRYT+P+EHAFFP+ LP P+L P+ +P +L PN +++N QI+++Y+ +I+  +  + DD   +GS+  AD+ +LQA+S+RIH GKF+AEAKF     +Y AL+  +D +G+MA LTN  VE +V +R  LKASTYGQDI G        CKV+P +I+ +Y + ++PLTK+V+V YL +R+
Sbjct:    9 TTTTRVL-LDDYRNVLIRQEETIIFALIERAQFARNDAIY-RQRAEATPSLREFKGKYNSFQGSFLDFLLSGTEKLHALNRRYTAPDEHAFFPQLLPEPMLPPVAYPTVLIPNAININDQIMNVYLQKILPHITADVDDSTTYGSAANADVAVLQALSKRIHFGKFIAEAKFQAETDKYSALIRNNDAEGIMAALTNVVVEEKVAKRVCLKASTYGQDIDGAPTTAGGHCKVDPQLISDLYLNFVMPLTKEVQVAYLLQRL 267          
BLAST of NO03G02340 vs. NCBI_GenBank
Match: XP_008893139.1 (chorismate mutase [Phytophthora parasitica INRA-310] >ETI45350.1 chorismate mutase [Phytophthora parasitica P1569] >ETK85273.1 chorismate mutase [Phytophthora parasitica] >ETL38700.1 chorismate mutase [Phytophthora parasitica] >ETL91821.1 chorismate mutase [Phytophthora parasitica] >ETM45143.1 chorismate mutase [Phytophthora parasitica] >ETN21338.1 chorismate mutase [Phytophthora parasitica INRA-310] >ETO73992.1 chorismate mutase [Phytophthora parasitica P1976] >ETP15166.1 chorismate mutase [Phytophthora parasitica CJ01A1] >ETP43191.1 chorismate mutase [Phytophthora parasitica P10297])

HSP 1 Score: 235.7 bits (600), Expect = 2.300e-58
Identity = 128/259 (49.42%), Postives = 172/259 (66.41%), Query Frame = 0
Query:   99 MSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSI----PDYTFLNSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCK-EGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQD----ITGETEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGRP 349
            + LD  R+ LIRQE++IIFALIERAQF RN  +Y+        +       YT  +  S L+++LLETEKLH   RRYTSP+E+AFFP  LP  IL  L +P +L PN +++N QI+ +Y  +I+  +     DD  +GS+  ADI +LQA+S+RIH GKF+AEAKF     RY  L+ A+D DG+M  LTN AVE +VLER KLKASTYGQD     + + +E KV P +I+ +YRD ++PLTK+V+V YL +RV  P
Sbjct:   16 VKLDDFRNVLIRQEETIIFALIERAQFPRNPEVYVSMKESKSAAFGGLKGKYTTFDG-SLLDFMLLETEKLHALTRRYTSPDENAFFPHLLPASILPSLDYPRVLNPNRININNQIMSVYQEKILPGLTTLASDDTAYGSTATADIAVLQALSKRIHFGKFIAEAKFQAETERYTKLILANDADGIMEALTNLAVEQKVLERVKLKASTYGQDPNAPASSDDKEMKVNPQLISDLYRDFVMPLTKEVQVQYLLQRVAHP 273          
BLAST of NO03G02340 vs. NCBI_GenBank
Match: OWZ18690.1 (Chorismate mutase [Phytophthora megakarya])

HSP 1 Score: 235.7 bits (600), Expect = 2.300e-58
Identity = 127/259 (49.03%), Postives = 173/259 (66.80%), Query Frame = 0
Query:   99 MSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSI----PDYTFLNSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCK-EGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQD----ITGETEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGRP 349
            + LD  R+ LIRQE++IIFALIERAQF RN  +Y+        +       YT  +  S L+++LLETEKLH   RRYTSP+E+AFFP  LP PIL  + +P +L PN +++N QI+ +Y  +I+  +     DD  +GS+  ADI +LQA+S+RIH GKF+AEAKF     RY  L+ A+D +G+M  LTN AVE +VLER KLKASTYGQD     + + +E KV P +I+ +YRD ++PLTK+V+V YL +RV  P
Sbjct:   16 VKLDDFRNVLIRQEETIIFALIERAQFPRNPEVYVTMKESKSAAFGGLKGKYTTFDG-SLLDFMLLETEKLHALTRRYTSPDENAFFPHLLPEPILPIIDYPRVLNPNRININNQIMSVYQEKILPGLTTLASDDTAYGSTATADIAVLQALSKRIHFGKFIAEAKFQAETERYTKLILANDANGIMEALTNLAVEQKVLERVKLKASTYGQDPNAPASSDDKEMKVNPQLISDLYRDFVMPLTKEVQVQYLLQRVAHP 273          
BLAST of NO03G02340 vs. NCBI_GenBank
Match: XP_002950218.1 (hypothetical protein VOLCADRAFT_43298 [Volvox carteri f. nagariensis] >EFJ48886.1 hypothetical protein VOLCADRAFT_43298, partial [Volvox carteri f. nagariensis])

HSP 1 Score: 235.0 bits (598), Expect = 3.900e-58
Identity = 128/271 (47.23%), Postives = 178/271 (65.68%), Query Frame = 0
Query:   96 ADVMSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSIPDYTFL-NSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALL--APNTVDVNAQILDLYINEIVSAVCKEGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQDIT---------------GETE---ECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERV 346
            +  +SL +IRS+LIRQED+IIF+ IERAQF RN  +Y    +     +P +       S LEY+L ETE+LHG VRRYTSP+EHAFFP+ LP  +L P+ +P++L    + +++N +IL +Y+++I+  +   GDD  +GSS   D+T LQA+S+RIH GKFVAEAKFL     Y AL+ A D DG+M LLT+  VE RV+ER + KA+T+G DIT               G+ E     KV P+++A +Y DI++PLTKDVEV+YL  R+
Sbjct:    3 SSALSLANIRSSLIRQEDTIIFSFIERAQFARNLPVYTPDAI----PVPGFDRCGRRYSLLEYVLRETEQLHGSVRRYTSPDEHAFFPDELPPLVLPPITYPSVLHSCADVININDRILRIYVDDILPGLTAPGDDFNYGSSATLDVTCLQALSKRIHFGKFVAEAKFLSKPEEYGALIRAGDADGIMELLTDRRVERRVVERVRRKAATFGLDITENGALPPAGGSNGGGGDAEAGPRLKVSPELVARVYEDIVMPLTKDVEVMYLLRRL 269          
BLAST of NO03G02340 vs. NCBI_GenBank
Match: XP_009526259.1 (hypothetical protein PHYSODRAFT_264157 [Phytophthora sojae] >EGZ17201.1 hypothetical protein PHYSODRAFT_264157 [Phytophthora sojae])

HSP 1 Score: 234.2 bits (596), Expect = 6.600e-58
Identity = 127/260 (48.85%), Postives = 171/260 (65.77%), Query Frame = 0
Query:   99 MSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSI----PDYTFLNSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCK-EGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQDITGET-----EECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGRP 349
            + LD  R+ LIRQE++IIFALIER QF RN  +Y+        +       YT  +  S L+++LLETEKLH   RRYTSP+E+AFFP  LP PIL  + +P +L PN +++N QI+ +Y  +I+  +     DD  +GS+  ADI +LQA+S+RIH GKF+AEAKF     RY  L+ A+D DG+M  LTN AVE +VLER KLKASTYGQD    T     ++ KV P +I+ +YRD ++PLTK+V+V YL +RV  P
Sbjct:   16 VKLDDFRNVLIRQEETIIFALIERTQFPRNPEVYVSMKESKSAAFGGLKGKYTTFDG-SLLDFMLLETEKLHALTRRYTSPDENAFFPHLLPEPILPIIDYPRVLNPNRININNQIMSVYQEKILPGLTTLASDDTAYGSTATADIAVLQALSKRIHFGKFIAEAKFQAETERYTKLILANDADGIMDALTNLAVEKKVLERVKLKASTYGQDPNAPTTASDDKDWKVNPQLISDLYRDFVMPLTKEVQVQYLLQRVAHP 274          
BLAST of NO03G02340 vs. NCBI_GenBank
Match: XP_005706790.1 (chorismate mutase [Galdieria sulphuraria] >EME30270.1 chorismate mutase [Galdieria sulphuraria])

HSP 1 Score: 234.2 bits (596), Expect = 6.600e-58
Identity = 131/278 (47.12%), Postives = 180/278 (64.75%), Query Frame = 0
Query:   72 SFPTSSPPTASTHTGHGALASTTTADVMSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSIPDYTFLNSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCKEGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQDI--TGETEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGR 348
            S PT      S+   +  + +    + + L+ +R  LIRQE+SIIFAL+ERAQF  N+ IY  G ++    IP +    S SF E+LL E EK +  VRRYTSP+E AFFP+ LP PIL PL FP  + PNT+++N++I D+Y+ +IV  +C+ GDD+ +GSS + D+  LQAIS+RIH GKF+AEAKF E+   Y   +   D + +  LLT+  VE R+ +R   KAS YG+DI  +G  +  KVEP +IA +YR  IIPLTK VEVLYL +R+ R
Sbjct:   55 STPTRLSRRRSSSPDYHGIPNPPPGERLKLEDLRERLIRQEESIIFALVERAQFMTNDVIYRPGGIE----IPGF----SGSFTEFLLCELEKGYALVRRYTSPDEQAFFPDILPEPILPPLSFPETIVPNTINLNSKIYDVYVQDIVPVICEAGDDQNYGSSAMYDVACLQAISKRIHYGKFIAEAKFGENPLEYSKHIRNGDTNALNELLTDPQVEKRLAKRVINKASAYGRDIDDSGALDTYKVEPQIIAELYRKHIIPLTKQVEVLYLLQRLSR 324          
BLAST of NO03G02340 vs. NCBI_GenBank
Match: XP_008610640.1 (hypothetical protein SDRG_06628 [Saprolegnia diclina VS20] >EQC35878.1 hypothetical protein SDRG_06628 [Saprolegnia diclina VS20])

HSP 1 Score: 233.8 bits (595), Expect = 8.600e-58
Identity = 127/260 (48.85%), Postives = 182/260 (70.00%), Query Frame = 0
Query:   94 TTADVMSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSIPDYT-FLNSL--SFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCKEGDDE-QHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQDITG----ETEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERV 346
            TT  V+ LD  R+ LIRQE++IIFALIERAQF RN+AIY +   +  PS+ ++    NS   SFL++LL  TEKLH   RRYT+P+EHAFFP+ LP P+L P+ +P +L PN +++N QI+++Y+ +I+  +  + DD   +GS+  AD+ +LQA+S+RIH GKF+AEAKF     +Y AL+  +D  G+MA LTN  VE +V +R  LKASTYGQDI G     +  CKV+P +I+ +Y + ++PLTK+V+V YL +R+
Sbjct:   24 TTTRVL-LDDYRNVLIRQEETIIFALIERAQFARNDAIY-RQRAEATPSLREFKGKYNSFQGSFLDFLLSGTEKLHALNRRYTAPDEHAFFPQLLPEPMLPPVAYPTVLIPNAININDQIMNVYLQKILPHITADVDDSTTYGSAANADVAVLQALSKRIHFGKFIAEAKFQAETDKYTALIRNNDATGIMAALTNVVVEEKVAKRVCLKASTYGQDIDGAPTTASGHCKVDPQLISDLYLNFVMPLTKEVQVAYLLQRL 281          
The following BLAST results are available for this feature:
BLAST of NO03G02340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
POM80881.14.600e-5949.42Chorismate mutase [Phytophthora palmivora var. pal... [more]
POM81034.11.000e-5849.42Chorismate mutase [Phytophthora palmivora var. pal... [more]
XP_002907918.11.300e-5849.03chorismate mutase, putative [Phytophthora infestan... [more]
XP_012199275.11.300e-5849.04hypothetical protein SPRG_05285 [Saprolegnia paras... [more]
XP_008893139.12.300e-5849.42chorismate mutase [Phytophthora parasitica INRA-31... [more]
OWZ18690.12.300e-5849.03Chorismate mutase [Phytophthora megakarya][more]
XP_002950218.13.900e-5847.23hypothetical protein VOLCADRAFT_43298 [Volvox cart... [more]
XP_009526259.16.600e-5848.85hypothetical protein PHYSODRAFT_264157 [Phytophtho... [more]
XP_005706790.16.600e-5847.12chorismate mutase [Galdieria sulphuraria] >EME3027... [more]
XP_008610640.18.600e-5848.85hypothetical protein SDRG_06628 [Saprolegnia dicli... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL067nonsL067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR001ncniR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR049ngnoR049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005678NSK005678Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G02340.1NO03G02340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572036gene_1420Nannochloropsis oceanica (N. oceanica CCMP1779)gene
CMgene971Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G02340.1NO03G02340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G02340 ID=NO03G02340|Name=NO03G02340|organism=Nannochloropsis oceanica|type=gene|length=1110bp
ATGGATCACCTTCATCAGCAGCAACGGTCCCCGCCAGCCTGTGCCTCCCC
GCCACCCTGCGCTTCCACTCCCATCTTCTACTCCGGGGGTGGCTTCAAAC
TGGCCGCAGCCGCTGCCGAGGTTGGCGGTCACGAGGAGGCTGTCAGCACA
TCCGCGCGCTTAACCTGGGGGGTCCCCTCCATCACTCATACTCCCAATGA
GGCAACCGCAACCTCTTTCCCCACTTCCTCCCCCCCCACTGCCTCCACCC
ACACCGGCCACGGCGCCCTGGCAAGCACCACCACAGCGGATGTCATGTCC
TTGGACAGCATCCGTAGCACCTTGATTCGACAGGAAGATTCCATCATCTT
TGCCCTGATCGAACGCGCTCAATTCCGTCGCAACGAGGCCATCTACCTTA
AAGGCATTCTGCAACTCGACCCTTCCATCCCGGACTACACCTTCCTCAAC
TCCCTCTCCTTCCTCGAATATCTCCTACTAGAAACCGAAAAATTACACGG
GAAAGTCCGTCGTTACACGAGCCCAGAAGAGCATGCATTCTTTCCCGAGC
ACCTGCCCAACCCAATCCTCACGCCTCTGCAATTCCCAGCGTTGCTCGCC
CCGAACACAGTAGATGTGAACGCCCAAATCCTCGATTTATATATCAATGA
GATTGTCTCCGCTGTGTGCAAGGAAGGGGATGATGAGCAGCATGGCTCGT
CCGTTCTAGCCGACATCACGTTATTGCAGGCCATATCCCGTCGGATCCAC
TTGGGAAAATTCGTGGCGGAGGCCAAATTTCTAGAAAGTGAGGCTCGCTA
CCGTGCGCTTGTGGCTGCTGATGATGTCGATGGGGTCATGGCTTTGCTGA
CCAACACGGCGGTAGAAGCCCGAGTGTTGGAACGGGCCAAGCTGAAGGCG
AGCACGTACGGGCAGGACATCACAGGCGAGACGGAGGAGTGCAAAGTCGA
GCCTGACGTCATTGCGGCCATCTACCGGGATATCATCATTCCGTTAACCA
AGGATGTGGAGGTATTATATTTGTTTGAGAGGGTAGGAAGGCCCGTCCCT
TTCCCTTTGCCGGCGCCTGCGGAAGAGTATAGGTTGAGAATCAGGGGGAG
TAGGATATGA
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protein sequence of NO03G02340.1

>NO03G02340.1-protein ID=NO03G02340.1-protein|Name=NO03G02340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=370bp
MDHLHQQQRSPPACASPPPCASTPIFYSGGGFKLAAAAAEVGGHEEAVST
SARLTWGVPSITHTPNEATATSFPTSSPPTASTHTGHGALASTTTADVMS
LDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSIPDYTFLN
SLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLA
PNTVDVNAQILDLYINEIVSAVCKEGDDEQHGSSVLADITLLQAISRRIH
LGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKA
STYGQDITGETEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGRPVP
FPLPAPAEEYRLRIRGSRI*
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