NO03G02340, NO03G02340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G02340 vs. NCBI_GenBank
Match: POM80881.1 (Chorismate mutase [Phytophthora palmivora var. palmivora]) HSP 1 Score: 238.0 bits (606), Expect = 4.600e-59 Identity = 128/259 (49.42%), Postives = 173/259 (66.80%), Query Frame = 0 Query: 99 MSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSI----PDYTFLNSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCK-EGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQD----ITGETEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGRP 349 + LD R+ LIRQE++IIFALIERAQF RN +Y+ + YT + S L+++LLETEKLH RRYTSP+E+AFFP LP PIL + +P +L PN +++N QI+ +Y +I+ + DD +GS+ ADI +LQA+S+RIH GKF+AEAKF RY L+ A+D DG+M LTN AVE +VLER KLKASTYGQD + + +E KV P +I+ +YRD ++PLTK+V+V YL +RV P Sbjct: 16 VKLDDFRNVLIRQEETIIFALIERAQFPRNPEVYVSMKESKSAAFGGLKGKYTTFDG-SLLDFMLLETEKLHALTRRYTSPDENAFFPHLLPEPILPIIDYPRVLNPNRININNQIMSVYQQKILPGLTTLASDDTAYGSTATADIAVLQALSKRIHFGKFIAEAKFQAETERYTQLILANDADGIMEALTNLAVEEKVLERVKLKASTYGQDPNAPASSDDKEMKVNPQLISDLYRDFVMPLTKEVQVQYLLQRVAHP 273
BLAST of NO03G02340 vs. NCBI_GenBank
Match: POM81034.1 (Chorismate mutase [Phytophthora palmivora var. palmivora]) HSP 1 Score: 236.9 bits (603), Expect = 1.000e-58 Identity = 128/259 (49.42%), Postives = 172/259 (66.41%), Query Frame = 0 Query: 99 MSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSI----PDYTFLNSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCK-EGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQD----ITGETEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGRP 349 + LD R+ LIRQE++IIFALIERAQF RN +Y+ + YT + S L+++LLETEKLH RRYTSP+E+AFFP LP PIL + +P +L PN +++N QI+ +Y +I+ + DD +GS+ ADI +LQA+S+RIH GKF+AEAKF RY L+ A+D DG+M LTN AVE +VLER KLKASTYGQD + + +E KV P I+ +YRD ++PLTK+V+V YL +RV P Sbjct: 16 VKLDDFRNVLIRQEETIIFALIERAQFPRNPEVYVSMKESKSAAFGGLKGKYTTFDG-SLLDFMLLETEKLHALTRRYTSPDENAFFPHLLPEPILPIIDYPRVLNPNRININNQIMSVYQQKILPGLTTLASDDTAYGSTATADIAVLQALSKRIHFGKFIAEAKFQAETERYTQLILANDADGIMEALTNLAVEEKVLERVKLKASTYGQDPNAPASSDDKEMKVNPQPISDLYRDFVMPLTKEVQVQYLLQRVAHP 273
BLAST of NO03G02340 vs. NCBI_GenBank
Match: XP_002907918.1 (chorismate mutase, putative [Phytophthora infestans T30-4] >EEY61001.1 chorismate mutase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 236.5 bits (602), Expect = 1.300e-58 Identity = 127/259 (49.03%), Postives = 173/259 (66.80%), Query Frame = 0 Query: 99 MSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSI----PDYTFLNSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAV-CKEGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQD----ITGETEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGRP 349 + LD R+ LIRQE+++IFALIER+QF RN +Y+ + YT + S L+++LLETEKLH RRYTSP+E+AFFP LP PIL L +P +L PN +++N QI+ +Y +I+ + DD +GS+ ADI +LQA+S+RIH GKF+AEAKF RY L+ A+D DG+M LTN AVE +VLER KLKASTYGQD + + +E KV P +I+ +YRD ++PLTK+V+V YL +RV P Sbjct: 16 VKLDDFRNVLIRQEETLIFALIERSQFPRNPEVYVSMKESKSAAFGGLKGKYTTFDG-SPLDFMLLETEKLHALTRRYTSPDENAFFPHLLPEPILPILDYPRVLNPNRININNQIMSVYQKKILPGLTTSASDDTAYGSTATADIAVLQALSKRIHFGKFIAEAKFQAETERYTKLILANDADGIMEALTNLAVEQKVLERVKLKASTYGQDPNAPASSDDKEMKVNPQLISGLYRDFVMPLTKEVQVQYLLQRVAHP 273
BLAST of NO03G02340 vs. NCBI_GenBank
Match: XP_012199275.1 (hypothetical protein SPRG_05285 [Saprolegnia parasitica CBS 223.65] >KDO30094.1 hypothetical protein SPRG_05285 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 236.5 bits (602), Expect = 1.300e-58 Identity = 128/261 (49.04%), Postives = 183/261 (70.11%), Query Frame = 0 Query: 93 TTTADVMSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSIPDYT-FLNSL--SFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCKEGDDE-QHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQDITGETE----ECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERV 346 TTT V+ LD R+ LIRQE++IIFALIERAQF RN+AIY + + PS+ ++ NS SFL++LL TEKLH RRYT+P+EHAFFP+ LP P+L P+ +P +L PN +++N QI+++Y+ +I+ + + DD +GS+ AD+ +LQA+S+RIH GKF+AEAKF +Y AL+ +D +G+MA LTN VE +V +R LKASTYGQDI G CKV+P +I+ +Y + ++PLTK+V+V YL +R+ Sbjct: 9 TTTTRVL-LDDYRNVLIRQEETIIFALIERAQFARNDAIY-RQRAEATPSLREFKGKYNSFQGSFLDFLLSGTEKLHALNRRYTAPDEHAFFPQLLPEPMLPPVAYPTVLIPNAININDQIMNVYLQKILPHITADVDDSTTYGSAANADVAVLQALSKRIHFGKFIAEAKFQAETDKYSALIRNNDAEGIMAALTNVVVEEKVAKRVCLKASTYGQDIDGAPTTAGGHCKVDPQLISDLYLNFVMPLTKEVQVAYLLQRL 267
BLAST of NO03G02340 vs. NCBI_GenBank
Match: XP_008893139.1 (chorismate mutase [Phytophthora parasitica INRA-310] >ETI45350.1 chorismate mutase [Phytophthora parasitica P1569] >ETK85273.1 chorismate mutase [Phytophthora parasitica] >ETL38700.1 chorismate mutase [Phytophthora parasitica] >ETL91821.1 chorismate mutase [Phytophthora parasitica] >ETM45143.1 chorismate mutase [Phytophthora parasitica] >ETN21338.1 chorismate mutase [Phytophthora parasitica INRA-310] >ETO73992.1 chorismate mutase [Phytophthora parasitica P1976] >ETP15166.1 chorismate mutase [Phytophthora parasitica CJ01A1] >ETP43191.1 chorismate mutase [Phytophthora parasitica P10297]) HSP 1 Score: 235.7 bits (600), Expect = 2.300e-58 Identity = 128/259 (49.42%), Postives = 172/259 (66.41%), Query Frame = 0 Query: 99 MSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSI----PDYTFLNSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCK-EGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQD----ITGETEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGRP 349 + LD R+ LIRQE++IIFALIERAQF RN +Y+ + YT + S L+++LLETEKLH RRYTSP+E+AFFP LP IL L +P +L PN +++N QI+ +Y +I+ + DD +GS+ ADI +LQA+S+RIH GKF+AEAKF RY L+ A+D DG+M LTN AVE +VLER KLKASTYGQD + + +E KV P +I+ +YRD ++PLTK+V+V YL +RV P Sbjct: 16 VKLDDFRNVLIRQEETIIFALIERAQFPRNPEVYVSMKESKSAAFGGLKGKYTTFDG-SLLDFMLLETEKLHALTRRYTSPDENAFFPHLLPASILPSLDYPRVLNPNRININNQIMSVYQEKILPGLTTLASDDTAYGSTATADIAVLQALSKRIHFGKFIAEAKFQAETERYTKLILANDADGIMEALTNLAVEQKVLERVKLKASTYGQDPNAPASSDDKEMKVNPQLISDLYRDFVMPLTKEVQVQYLLQRVAHP 273
BLAST of NO03G02340 vs. NCBI_GenBank
Match: OWZ18690.1 (Chorismate mutase [Phytophthora megakarya]) HSP 1 Score: 235.7 bits (600), Expect = 2.300e-58 Identity = 127/259 (49.03%), Postives = 173/259 (66.80%), Query Frame = 0 Query: 99 MSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSI----PDYTFLNSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCK-EGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQD----ITGETEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGRP 349 + LD R+ LIRQE++IIFALIERAQF RN +Y+ + YT + S L+++LLETEKLH RRYTSP+E+AFFP LP PIL + +P +L PN +++N QI+ +Y +I+ + DD +GS+ ADI +LQA+S+RIH GKF+AEAKF RY L+ A+D +G+M LTN AVE +VLER KLKASTYGQD + + +E KV P +I+ +YRD ++PLTK+V+V YL +RV P Sbjct: 16 VKLDDFRNVLIRQEETIIFALIERAQFPRNPEVYVTMKESKSAAFGGLKGKYTTFDG-SLLDFMLLETEKLHALTRRYTSPDENAFFPHLLPEPILPIIDYPRVLNPNRININNQIMSVYQEKILPGLTTLASDDTAYGSTATADIAVLQALSKRIHFGKFIAEAKFQAETERYTKLILANDANGIMEALTNLAVEQKVLERVKLKASTYGQDPNAPASSDDKEMKVNPQLISDLYRDFVMPLTKEVQVQYLLQRVAHP 273
BLAST of NO03G02340 vs. NCBI_GenBank
Match: XP_002950218.1 (hypothetical protein VOLCADRAFT_43298 [Volvox carteri f. nagariensis] >EFJ48886.1 hypothetical protein VOLCADRAFT_43298, partial [Volvox carteri f. nagariensis]) HSP 1 Score: 235.0 bits (598), Expect = 3.900e-58 Identity = 128/271 (47.23%), Postives = 178/271 (65.68%), Query Frame = 0 Query: 96 ADVMSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSIPDYTFL-NSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALL--APNTVDVNAQILDLYINEIVSAVCKEGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQDIT---------------GETE---ECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERV 346 + +SL +IRS+LIRQED+IIF+ IERAQF RN +Y + +P + S LEY+L ETE+LHG VRRYTSP+EHAFFP+ LP +L P+ +P++L + +++N +IL +Y+++I+ + GDD +GSS D+T LQA+S+RIH GKFVAEAKFL Y AL+ A D DG+M LLT+ VE RV+ER + KA+T+G DIT G+ E KV P+++A +Y DI++PLTKDVEV+YL R+ Sbjct: 3 SSALSLANIRSSLIRQEDTIIFSFIERAQFARNLPVYTPDAI----PVPGFDRCGRRYSLLEYVLRETEQLHGSVRRYTSPDEHAFFPDELPPLVLPPITYPSVLHSCADVININDRILRIYVDDILPGLTAPGDDFNYGSSATLDVTCLQALSKRIHFGKFVAEAKFLSKPEEYGALIRAGDADGIMELLTDRRVERRVVERVRRKAATFGLDITENGALPPAGGSNGGGGDAEAGPRLKVSPELVARVYEDIVMPLTKDVEVMYLLRRL 269
BLAST of NO03G02340 vs. NCBI_GenBank
Match: XP_009526259.1 (hypothetical protein PHYSODRAFT_264157 [Phytophthora sojae] >EGZ17201.1 hypothetical protein PHYSODRAFT_264157 [Phytophthora sojae]) HSP 1 Score: 234.2 bits (596), Expect = 6.600e-58 Identity = 127/260 (48.85%), Postives = 171/260 (65.77%), Query Frame = 0 Query: 99 MSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSI----PDYTFLNSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCK-EGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQDITGET-----EECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGRP 349 + LD R+ LIRQE++IIFALIER QF RN +Y+ + YT + S L+++LLETEKLH RRYTSP+E+AFFP LP PIL + +P +L PN +++N QI+ +Y +I+ + DD +GS+ ADI +LQA+S+RIH GKF+AEAKF RY L+ A+D DG+M LTN AVE +VLER KLKASTYGQD T ++ KV P +I+ +YRD ++PLTK+V+V YL +RV P Sbjct: 16 VKLDDFRNVLIRQEETIIFALIERTQFPRNPEVYVSMKESKSAAFGGLKGKYTTFDG-SLLDFMLLETEKLHALTRRYTSPDENAFFPHLLPEPILPIIDYPRVLNPNRININNQIMSVYQEKILPGLTTLASDDTAYGSTATADIAVLQALSKRIHFGKFIAEAKFQAETERYTKLILANDADGIMDALTNLAVEKKVLERVKLKASTYGQDPNAPTTASDDKDWKVNPQLISDLYRDFVMPLTKEVQVQYLLQRVAHP 274
BLAST of NO03G02340 vs. NCBI_GenBank
Match: XP_005706790.1 (chorismate mutase [Galdieria sulphuraria] >EME30270.1 chorismate mutase [Galdieria sulphuraria]) HSP 1 Score: 234.2 bits (596), Expect = 6.600e-58 Identity = 131/278 (47.12%), Postives = 180/278 (64.75%), Query Frame = 0 Query: 72 SFPTSSPPTASTHTGHGALASTTTADVMSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSIPDYTFLNSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCKEGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQDI--TGETEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGR 348 S PT S+ + + + + + L+ +R LIRQE+SIIFAL+ERAQF N+ IY G ++ IP + S SF E+LL E EK + VRRYTSP+E AFFP+ LP PIL PL FP + PNT+++N++I D+Y+ +IV +C+ GDD+ +GSS + D+ LQAIS+RIH GKF+AEAKF E+ Y + D + + LLT+ VE R+ +R KAS YG+DI +G + KVEP +IA +YR IIPLTK VEVLYL +R+ R Sbjct: 55 STPTRLSRRRSSSPDYHGIPNPPPGERLKLEDLRERLIRQEESIIFALVERAQFMTNDVIYRPGGIE----IPGF----SGSFTEFLLCELEKGYALVRRYTSPDEQAFFPDILPEPILPPLSFPETIVPNTINLNSKIYDVYVQDIVPVICEAGDDQNYGSSAMYDVACLQAISKRIHYGKFIAEAKFGENPLEYSKHIRNGDTNALNELLTDPQVEKRLAKRVINKASAYGRDIDDSGALDTYKVEPQIIAELYRKHIIPLTKQVEVLYLLQRLSR 324
BLAST of NO03G02340 vs. NCBI_GenBank
Match: XP_008610640.1 (hypothetical protein SDRG_06628 [Saprolegnia diclina VS20] >EQC35878.1 hypothetical protein SDRG_06628 [Saprolegnia diclina VS20]) HSP 1 Score: 233.8 bits (595), Expect = 8.600e-58 Identity = 127/260 (48.85%), Postives = 182/260 (70.00%), Query Frame = 0 Query: 94 TTADVMSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSIPDYT-FLNSL--SFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCKEGDDE-QHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQDITG----ETEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERV 346 TT V+ LD R+ LIRQE++IIFALIERAQF RN+AIY + + PS+ ++ NS SFL++LL TEKLH RRYT+P+EHAFFP+ LP P+L P+ +P +L PN +++N QI+++Y+ +I+ + + DD +GS+ AD+ +LQA+S+RIH GKF+AEAKF +Y AL+ +D G+MA LTN VE +V +R LKASTYGQDI G + CKV+P +I+ +Y + ++PLTK+V+V YL +R+ Sbjct: 24 TTTRVL-LDDYRNVLIRQEETIIFALIERAQFARNDAIY-RQRAEATPSLREFKGKYNSFQGSFLDFLLSGTEKLHALNRRYTAPDEHAFFPQLLPEPMLPPVAYPTVLIPNAININDQIMNVYLQKILPHITADVDDSTTYGSAANADVAVLQALSKRIHFGKFIAEAKFQAETDKYTALIRNNDATGIMAALTNVVVEEKVAKRVCLKASTYGQDIDGAPTTASGHCKVDPQLISDLYLNFVMPLTKEVQVAYLLQRL 281 The following BLAST results are available for this feature:
BLAST of NO03G02340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G02340 ID=NO03G02340|Name=NO03G02340|organism=Nannochloropsis oceanica|type=gene|length=1110bpback to top protein sequence of NO03G02340.1 >NO03G02340.1-protein ID=NO03G02340.1-protein|Name=NO03G02340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=370bpback to top Synonyms
Publications
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