NO03G02340, NO03G02340 (gene) Nannochloropsis oceanica

Overview
NameNO03G02340
Unique NameNO03G02340
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1110
Alignment locationchr3:678218..679327 +

Link to JBrowse

Properties
Property NameValue
DescriptionChorismate mutase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:678218..679327 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0046417chorismate metabolic process
GO:0009073aromatic amino acid family biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004106chorismate mutase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR036263Chorismate_II_sf
IPR008238Chorismate_mutase_AroQ_euk
Homology
BLAST of NO03G02340 vs. NCBI_GenBank
Match: EWM29663.1 (chorismate mutase [Nannochloropsis gaditana])

HSP 1 Score: 474.2 bits (1219), Expect = 3.800e-130
Identity = 254/315 (80.63%), Postives = 274/315 (86.98%), Query Frame = 0
Query:   53 RLTWGVPSITHTPNEATAT-SFPTSS--PPTASTHTGHGALASTTTADVMSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSIPDYTFLNSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCKEGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQDITGETEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGRPVXXXXXXXXXXYRLRI 365
            RLTWG PSITH+ +EA+   S P++S    ++  ++     ASTTTADVMSLDSIRSTLIRQEDSIIFALIERAQFR+N+AIY KGILQLDPSIPDY FL +LSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLP+PILTPLQFPALLAPNTVDVNAQIL LYINE+V AVCKEGDDEQHGSSVLADITLLQA+SRRIHLGKFVAE KF E EA+YRALV ADDVDGVM+LLTN+AVEARVL RAKLKASTYGQDI GETE CKVEPDVIAAIYRD+IIPLTKDVEVLYLFERVGR            YRLR+
Sbjct:  118 RLTWGAPSITHSHHEASEDGSVPSASFISTSSRVNSPSAVSASTTTADVMSLDSIRSTLIRQEDSIIFALIERAQFRQNQAIYAKGILQLDPSIPDYPFLKTLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPDPILTPLQFPALLAPNTVDVNAQILHLYINEVVPAVCKEGDDEQHGSSVLADITLLQALSRRIHLGKFVAETKFQEEEAKYRALVGADDVDGVMSLLTNSAVEARVLARAKLKASTYGQDIMGETEACKVEPDVIAAIYRDVIIPLTKDVEVLYLFERVGRKPPAPLPGPASHYRLRV 432          
BLAST of NO03G02340 vs. NCBI_GenBank
Match: CBJ48359.1 (Chorismate Mutase [Ectocarpus siliculosus])

HSP 1 Score: 272.3 bits (695), Expect = 2.200e-69
Identity = 150/265 (56.60%), Postives = 180/265 (67.92%), Query Frame = 0
Query:  100 SLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSIPDYTFLNSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCKEGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQDITG---ETEEC-------------KVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGRP 349
            SL+S+R +LIRQE++IIFALIER QFR N AIY     +++ S     +    SFLEY+L ETEKLH  VRRY S EE AFFP  LP PIL PL FP LLAPN V+VN QIL  Y++EIV  +C+ GDD+QHGSSV+ D+  LQA+SRR+HLGKFVAE+KF E    Y+ L  A D  GV+ LLTN AVE +VL+RA +KASTYG DI      TE+              KV P  I  IYRD +IPLTKDVE+LYLF+R G P
Sbjct:  122 SLESVRGSLIRQEETIIFALIEREQFRCNNAIYTDRTFRVNRSDAADIYGRDASFLEYMLSETEKLHATVRRYMSLEELAFFPMFLPEPILPPLDFPRLLAPNDVNVNDQILKRYVSEIVPMICEPGDDDQHGSSVVCDVNALQALSRRVHLGKFVAESKFQEDSKTYQDLCRAGDARGVLELLTNKAVEEKVLKRAFMKASTYGSDINDVPVSTEDAKGGDGAAKAEQNFKVNPQFIVDIYRDTVIPLTKDVEILYLFQRTGYP 386          
BLAST of NO03G02340 vs. NCBI_GenBank
Match: XP_002177537.1 (probable chorismate mutase [Phaeodactylum tricornutum CCAP 1055/1] >EEC52000.1 probable chorismate mutase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 247.7 bits (631), Expect = 5.700e-62
Identity = 145/284 (51.06%), Postives = 184/284 (64.79%), Query Frame = 0
Query:   95 TADVMSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQL------DPSIPDYTFLNSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLP---NPILTPLQFPALLAPNT-----VDVNAQILDLYINEIVSAVCKEGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQD-----------------ITGETEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGR 348
            T DV+SLDSIRS+LIRQE++IIFALIERAQFR+NE +Y KG            S+ D+     LSF+EY+L+ TE LH  VRRYTSPEE AFFPE LP      L  L++P  L  +      ++ N  +L  Y+ +IV +V ++GDDEQHGS+VL DI  LQA+SRRIH GKFVAE+KF    + Y+ LV A+D DGVM LLTNT VE +V+ RAKLKA+TYG +                 +       K++P VI ++YRDI+IPLTK +EV YLF R GR
Sbjct:   11 TVDVLSLDSIRSSLIRQEETIIFALIERAQFRQNEIVYRKGGFGNLGTPVGSTSVDDH----DLSFMEYMLVGTEALHCGVRRYTSPEEQAFFPERLPYGQMDALPLLEYPQELLSSVGGACDLNFNKALLQNYVEKIVPSVSQQGDDEQHGSTVLCDIAALQALSRRIHYGKFVAESKFRSDPSGYQQLVDANDADGVMKLLTNTVVEEKVIRRAKLKAATYGTEPLLSEMPPIKGADTTSIVAAAAAPGKIDPTVIESVYRDIVIPLTKVIEVAYLFRRCGR 290          
BLAST of NO03G02340 vs. NCBI_GenBank
Match: XP_008873366.1 (chorismate mutase [Aphanomyces invadans] >ETV97805.1 chorismate mutase [Aphanomyces invadans])

HSP 1 Score: 245.0 bits (624), Expect = 3.700e-61
Identity = 130/258 (50.39%), Postives = 176/258 (68.22%), Query Frame = 0
Query:  101 LDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSIPDYTFLNSL--SFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCKEGDDE-QHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQDITGET-------EECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGRP 349
            LD  R+ LIRQE++IIFALIERAQF RN AIY K     +  +      +S   SFLE++L ETE+LH   RRYTSP+EHAFFP  LP+PIL PL +  +L PNT+++N QI+ +Y+ +++  + ++ DD   +GSS  AD+ +LQA+S+RIH GKF+AEAKF     RY  L+  +D +G+M  LTN AVE +V+ R + KASTYGQDI G T       E CKV+P VIA +YR+ ++PLTK V+V YL +R+  P
Sbjct:    9 LDDYRNVLIRQEETIIFALIERAQFPRNTAIYRKRADAAESLLSFKGKYHSFEGSFLEFMLSETERLHALNRRYTSPDEHAFFPSFLPDPILPPLDYQTVLMPNTININDQIMSVYLEKLLPHITQDIDDHTTYGSSANADVAVLQALSKRIHFGKFIAEAKFQAETERYTKLILNNDAEGIMDALTNLAVEDKVVMRVRFKASTYGQDIDGSTTHDATSFEHCKVDPQVIADLYRNFVMPLTKQVQVTYLLQRLHHP 266          
BLAST of NO03G02340 vs. NCBI_GenBank
Match: XP_009829673.1 (chorismate mutase [Aphanomyces astaci] >ETV80726.1 chorismate mutase [Aphanomyces astaci])

HSP 1 Score: 244.6 bits (623), Expect = 4.900e-61
Identity = 133/273 (48.72%), Postives = 180/273 (65.93%), Query Frame = 0
Query:   93 TTTADVMSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSIPDYTFLNSL-----SFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCKEGDDE-QHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQDITGET-----------EECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGRP 349
            T T   + LD  R+ LIRQE++IIF+LIERAQF RN  IY K   + D +    +F         SFLE++L ETE+LH   RRYTSP+EHAFFP  LP+PIL PL + ++L PNT+++N QI+ +Y+ +++  +  + DD    GSS  ADI +LQA+S+RIH GKF+AEAKF     RY AL+ A+D +G+M  LTN AVE +V+ R + KASTYGQDI  +T           E CKV+P VIA +YR+ ++PLTK V+V YL +R+  P
Sbjct:    2 TATPKKVLLDDYRNVLIRQEETIIFSLIERAQFLRNAPIYRK---RADATASLLSFKGKYNGFEGSFLEFMLSETERLHALNRRYTSPDEHAFFPSFLPDPILPPLDYQSVLIPNTININDQIMSVYLEKLLPHITHDSDDHTTFGSSANADIAVLQALSKRIHFGKFIAEAKFQAETKRYTALILANDAEGIMDALTNLAVEDKVVMRVRFKASTYGQDIVDDTTTTIHDNSNSIEHCKVDPQVIADLYRNFVMPLTKQVQVAYLLQRLHHP 271          
BLAST of NO03G02340 vs. NCBI_GenBank
Match: XP_009829674.1 (chorismate mutase, variant [Aphanomyces astaci] >ETV80727.1 chorismate mutase, variant [Aphanomyces astaci])

HSP 1 Score: 244.6 bits (623), Expect = 4.900e-61
Identity = 133/273 (48.72%), Postives = 180/273 (65.93%), Query Frame = 0
Query:   93 TTTADVMSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSIPDYTFLNSL-----SFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCKEGDDE-QHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQDITGET-----------EECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGRP 349
            T T   + LD  R+ LIRQE++IIF+LIERAQF RN  IY K   + D +    +F         SFLE++L ETE+LH   RRYTSP+EHAFFP  LP+PIL PL + ++L PNT+++N QI+ +Y+ +++  +  + DD    GSS  ADI +LQA+S+RIH GKF+AEAKF     RY AL+ A+D +G+M  LTN AVE +V+ R + KASTYGQDI  +T           E CKV+P VIA +YR+ ++PLTK V+V YL +R+  P
Sbjct:    2 TATPKKVLLDDYRNVLIRQEETIIFSLIERAQFLRNAPIYRK---RADATASLLSFKGKYNGFEGSFLEFMLSETERLHALNRRYTSPDEHAFFPSFLPDPILPPLDYQSVLIPNTININDQIMSVYLEKLLPHITHDSDDHTTFGSSANADIAVLQALSKRIHFGKFIAEAKFQAETKRYTALILANDAEGIMDALTNLAVEDKVVMRVRFKASTYGQDIVDDTTTTIHDNSNSIEHCKVDPQVIADLYRNFVMPLTKQVQVAYLLQRLHHP 271          
BLAST of NO03G02340 vs. NCBI_GenBank
Match: XP_002176231.1 (probable chorismate mutase [Phaeodactylum tricornutum CCAP 1055/1] >EEC42784.1 probable chorismate mutase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 243.8 bits (621), Expect = 8.300e-61
Identity = 145/273 (53.11%), Postives = 181/273 (66.30%), Query Frame = 0
Query:   95 TADVMSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQL------DPSIPDYTFLNSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLP---NPILTPLQFPALLAPNT-----VDVNAQILDLYINEIVSAVCKEGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYG-QDITGETEECKVEPD-----VIAAIYRDIIIPLTKDVEVLYLFERVGR 348
            T DV+SLDSIRS+LIRQE++IIFALIERAQFR+NE +Y KG            S+ D+     LSF+EY+L+ TE LH  VRRYTSPEEHAFFPE LP      L  L++P  L  +      ++ N  +L  Y+ +IV +V K+GDDEQHGS+VL DI  LQA+SRRIH GKFVAE+K+    + Y+ LV A+D DGVM LLTN  VE +V+ RAKLKA+TYG + +  E    K           AA+YRDI+IPLTK +EV YLF R GR
Sbjct:   11 TVDVLSLDSIRSSLIRQEETIIFALIERAQFRQNEIVYRKGGFGNLGTPVGSTSVEDH----DLSFMEYMLVGTEALHCGVRRYTSPEEHAFFPERLPYGQMDALPLLEYPQELLSSVGGACDLNFNKALLQNYVEKIVPSVSKQGDDEQHGSTVLCDIAALQALSRRIHYGKFVAESKYRSDPSGYQQLVDANDADGVMKLLTNRVVEEKVIRRAKLKAATYGTEPLLSEMPPIKGADTTSIVAAAAAVYRDIVIPLTKVIEVAYLFRRCGR 279          
BLAST of NO03G02340 vs. NCBI_GenBank
Match: KOO23465.1 (chorismate mutase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 242.7 bits (618), Expect = 1.800e-60
Identity = 132/255 (51.76%), Postives = 172/255 (67.45%), Query Frame = 0
Query:   93 TTTADVMSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSIPDYTFL--NSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCKEGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQDITGETEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERV 346
            T     +SLDSIRS LIRQED+IIFALIERAQ R+N + Y +G      S   Y  L     S L+++LLETE+LH +VRRYTSP+EHAFFP  LP P L  + F  +L P  V++N +I+D+Y++ +V  +C  GDD+QHGSSV+ADI  LQAIS+R+H G +VAE+KF     +Y  L+ A D +G+M LLTN AVE RVL+R +LKAST+GQ+I             I A+YRD +IPLTK  EV YL +R+
Sbjct:    2 TVPPSSLSLDSIRSALIRQEDTIIFALIERAQHRQNASCYERG------SANSYAVLAGKGASLLDFMLLETERLHARVRRYTSPDEHAFFPHRLPAPQLPMIDFEPVLHPCIVNLNGEIMDMYLSRVVPGLCGPGDDQQHGSSVVADIAALQAISKRVHYGFYVAESKFRAQPEQYTRLIEAGDEEGIMELLTNAAVEQRVLQRVRLKASTFGQEIEAP----------IVAMYRDYVIPLTKVAEVQYLLQRL 240          
BLAST of NO03G02340 vs. NCBI_GenBank
Match: GAX92267.1 (chorismate mutase [Pythium insidiosum])

HSP 1 Score: 242.7 bits (618), Expect = 1.800e-60
Identity = 135/292 (46.23%), Postives = 188/292 (64.38%), Query Frame = 0
Query:   68 ATATSFPTSSPPTASTHTGHGALASTTTADVMSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYL----KGILQLDPSIPDYTFLNSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLAPNTVDVNAQILDLYINEIVSAVCKE-GDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQDI------TGETEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGRP 349
            ATAT+        +S H+ H  + S     V  LD  R+ LIRQE++IIFALIERAQF RN+A+Y+     G +        Y      SFL+++  ETEKLH   RRYTSP+E+AF+P  LP PIL  L +P +L PN +++N QI+ +Y+ +I+  +  +  D   +GS+  ADI +LQA+S+RIH GKF+AEAKF     RY  L+ A+D +G+MA LTN AVE +VL R +LKASTYGQD+      T    ECKV+P +I+ +YRD ++PLTK+V+V+YL +R+  P
Sbjct:    2 ATATA-------ASSVHSSHAVVFSDPMRPV-RLDDFRNVLIRQEETIIFALIERAQFARNQAVYIPRDAPGSVAFGGLKGKYDAFKG-SFLDFMFSETEKLHALTRRYTSPDENAFYPHLLPEPILPNLNYPQVLHPNRININDQIMSVYLEKILPGLTDDTSDATSYGSTATADIAVLQALSKRIHFGKFIAEAKFQAERERYTQLILANDAEGIMAALTNMAVEEKVLRRVQLKASTYGQDVQEGSQTTATANECKVDPQLISDLYRDFVMPLTKEVQVMYLLQRLAHP 284          
BLAST of NO03G02340 vs. NCBI_GenBank
Match: OEU23051.1 (chorismate mutase, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 240.4 bits (612), Expect = 9.200e-60
Identity = 145/287 (50.52%), Postives = 187/287 (65.16%), Query Frame = 0
Query:   95 TADVMSLDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGI------LQLDPSIPDYTFLNSLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPE-HLPNPILTPLQ-----FPALLA----PNTVDVNAQILDLYINEIVSAVCKEGDDEQHGSSVLADITLLQAISRRIHLGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKASTYGQD--------ITGE-------------TEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFER 345
            T++ +SLDSIR++LIRQE++IIFALIERAQFR+N A+Y KGI           +         +SFLEY+L ETEKLH  VRRY SPEEHAF+PE  L +P  T L+        LL+     ++V+ N  +L  YI ++V A+C +GDDEQHGSSVL D+ +LQA+S+R+H GKFVAE+K+L     Y+ALV A+D +GVM LLTN AVE +VL RA+LKA+TYG D        + GE             +E+ KV    +  IYRD+IIPLTKDVEV YLF R
Sbjct:    4 TSEFLSLDSIRASLIRQEETIIFALIERAQFRQNNAVYEKGIEKERNLFSESDNXXXXXXXXDVSFLEYMLTETEKLHASVRRYRSPEEHAFYPEKQLVDPTDTVLKQQLEYQSGLLSDIGDASSVNFNEILLKKYIEDVVPAICAKGDDEQHGSSVLNDVAVLQALSKRVHYGKFVAESKYLGDPDAYQALVDANDAEGVMKLLTNEAVELKVLRRARLKAATYGTDPLLADLPPLYGEQKGIPSIALGDDGSEDNKVCALTVEIIYRDLIIPLTKDVEVAYLFRR 290          
The following BLAST results are available for this feature:
BLAST of NO03G02340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29663.13.800e-13080.63chorismate mutase [Nannochloropsis gaditana][more]
CBJ48359.12.200e-6956.60Chorismate Mutase [Ectocarpus siliculosus][more]
XP_002177537.15.700e-6251.06probable chorismate mutase [Phaeodactylum tricornu... [more]
XP_008873366.13.700e-6150.39chorismate mutase [Aphanomyces invadans] >ETV97805... [more]
XP_009829673.14.900e-6148.72chorismate mutase [Aphanomyces astaci] >ETV80726.1... [more]
XP_009829674.14.900e-6148.72chorismate mutase, variant [Aphanomyces astaci] >E... [more]
XP_002176231.18.300e-6153.11probable chorismate mutase [Phaeodactylum tricornu... [more]
KOO23465.11.800e-6051.76chorismate mutase [Chrysochromulina sp. CCMP291][more]
GAX92267.11.800e-6046.23chorismate mutase [Pythium insidiosum][more]
OEU23051.19.200e-6050.52chorismate mutase, partial [Fragilariopsis cylindr... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL067nonsL067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR001ncniR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR049ngnoR049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005678NSK005678Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G02340.1NO03G02340.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|572036gene_1420Nannochloropsis oceanica (N. oceanica CCMP1779)gene
CMgene971Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G02340.1NO03G02340.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G02340 ID=NO03G02340|Name=NO03G02340|organism=Nannochloropsis oceanica|type=gene|length=1110bp
ATGGATCACCTTCATCAGCAGCAACGGTCCCCGCCAGCCTGTGCCTCCCC
GCCACCCTGCGCTTCCACTCCCATCTTCTACTCCGGGGGTGGCTTCAAAC
TGGCCGCAGCCGCTGCCGAGGTTGGCGGTCACGAGGAGGCTGTCAGCACA
TCCGCGCGCTTAACCTGGGGGGTCCCCTCCATCACTCATACTCCCAATGA
GGCAACCGCAACCTCTTTCCCCACTTCCTCCCCCCCCACTGCCTCCACCC
ACACCGGCCACGGCGCCCTGGCAAGCACCACCACAGCGGATGTCATGTCC
TTGGACAGCATCCGTAGCACCTTGATTCGACAGGAAGATTCCATCATCTT
TGCCCTGATCGAACGCGCTCAATTCCGTCGCAACGAGGCCATCTACCTTA
AAGGCATTCTGCAACTCGACCCTTCCATCCCGGACTACACCTTCCTCAAC
TCCCTCTCCTTCCTCGAATATCTCCTACTAGAAACCGAAAAATTACACGG
GAAAGTCCGTCGTTACACGAGCCCAGAAGAGCATGCATTCTTTCCCGAGC
ACCTGCCCAACCCAATCCTCACGCCTCTGCAATTCCCAGCGTTGCTCGCC
CCGAACACAGTAGATGTGAACGCCCAAATCCTCGATTTATATATCAATGA
GATTGTCTCCGCTGTGTGCAAGGAAGGGGATGATGAGCAGCATGGCTCGT
CCGTTCTAGCCGACATCACGTTATTGCAGGCCATATCCCGTCGGATCCAC
TTGGGAAAATTCGTGGCGGAGGCCAAATTTCTAGAAAGTGAGGCTCGCTA
CCGTGCGCTTGTGGCTGCTGATGATGTCGATGGGGTCATGGCTTTGCTGA
CCAACACGGCGGTAGAAGCCCGAGTGTTGGAACGGGCCAAGCTGAAGGCG
AGCACGTACGGGCAGGACATCACAGGCGAGACGGAGGAGTGCAAAGTCGA
GCCTGACGTCATTGCGGCCATCTACCGGGATATCATCATTCCGTTAACCA
AGGATGTGGAGGTATTATATTTGTTTGAGAGGGTAGGAAGGCCCGTCCCT
TTCCCTTTGCCGGCGCCTGCGGAAGAGTATAGGTTGAGAATCAGGGGGAG
TAGGATATGA
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protein sequence of NO03G02340.1

>NO03G02340.1-protein ID=NO03G02340.1-protein|Name=NO03G02340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=370bp
MDHLHQQQRSPPACASPPPCASTPIFYSGGGFKLAAAAAEVGGHEEAVST
SARLTWGVPSITHTPNEATATSFPTSSPPTASTHTGHGALASTTTADVMS
LDSIRSTLIRQEDSIIFALIERAQFRRNEAIYLKGILQLDPSIPDYTFLN
SLSFLEYLLLETEKLHGKVRRYTSPEEHAFFPEHLPNPILTPLQFPALLA
PNTVDVNAQILDLYINEIVSAVCKEGDDEQHGSSVLADITLLQAISRRIH
LGKFVAEAKFLESEARYRALVAADDVDGVMALLTNTAVEARVLERAKLKA
STYGQDITGETEECKVEPDVIAAIYRDIIIPLTKDVEVLYLFERVGRPVP
FPLPAPAEEYRLRIRGSRI*
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Synonyms
Publications