NO03G02210, NO03G02210 (gene) Nannochloropsis oceanica

Overview
NameNO03G02210
Unique NameNO03G02210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4030
Alignment locationchr3:652371..656400 +

Link to JBrowse

Properties
Property NameValue
DescriptionZinc finger ran-binding domain-containing protein 3
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:652371..656400 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR000330SNF2_N
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
Homology
BLAST of NO03G02210 vs. NCBI_GenBank
Match: EWM29676.1 (zinc finger ran-binding domain-containing protein 3 [Nannochloropsis gaditana])

HSP 1 Score: 941.0 bits (2431), Expect = 3.800e-270
Identity = 521/704 (74.01%), Postives = 570/704 (80.97%), Query Frame = 0
Query:  370 ERPRYDSLSYSAGPSIQFAVSSGGEFSAKLTGAVPEGVISSFRLTPGARHKKSKRRWYFPLVAHNNLKVAVEQLRRQLYRDTGVILTLSPIPDDVLRQLSINKDGHKLAESDAQKRAHDKLVSLLPRRLLDALAPFQREGVAFVVGREGRGLIADEMGLGKTIQAIAIATVYRVEWPLLVMCPSSARFQWEAELLKWLDRDVLKKEEIQVMTAGKEKLHDSAKVVILSYDLALRLKETLRKPVRSAGTAAGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWRDQSSFIDRYCTGGKVGGRTAGAKKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILKGLPPKRRIFHKLAVPEPALREQLERALEGLSIVSATAXXXXXXXXXXXXXXXXXXXXXXXPDDLYSTLARQHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGGERTVLEATXXXXXXXXXXSFKADAAAVTGRGMTEEEMAEWSARDIHQRKKMILMEVFKLTGTAKIPLAIDRVREILASELGGKVLIFAHHRNVLDGIEKGCLDGVRHIRIDGGTAPRERQAQVERFQTDAGIRVALLSLTAAGLALTLTAANRALFVELFWTPASLLQAEDRCHRIGQTSEVEIEYLLAEGTLDDALWPLIRRKMRVLGELVEGAEGLDME 1074
            ERP Y     S  PSI FAVSSGGEF+A+LTG VP  V+S+FRLTPGARHKKSKRRWYFPL AHNNL VAV+QLRRQ YR+TGV+L LSPIP+DVLRQLSI  DG +LAES++QK+AHDKL  LLPRRLL+ALAPFQREGV+FVV REGRGLIADEMGLGKTIQAIA+A VY+ EWPLLVMCPSSAR+ WEAELLKWLDRDVLKKEEIQV+ AG+E+LH+++KVVILSY LALRLKE LR PVRSAG A GHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAW D SSFI RYCTGG+ G +T+G  KKWQGRGQGAANLRELHEMLKATVMVRRRKKDIL GLPPKRR FHKL VPE A+R +LE ALE LSIVSAT     XXXXXXXXXXXXXXXXXX  +DLY+TLARQ R                                GGE     A           S         G G+    M +WSAR+I QRKK++LMEVF+LTGTAKIPLA+DRV+ +LASEL GK L+FAHH NV++GIE GCL  V HIRIDG T P ERQA+V+ FQTD G+RVALLSLTAAGLALTLTAA+R LF ELFWTP +LLQAEDRCHRIGQTSEVE+EYLLA GTLDDALWPLIRRKMRVLGELVEGAEGLD+E
Sbjct:  293 ERPSY----VSVAPSIHFAVSSGGEFAARLTGPVPGSVLSTFRLTPGARHKKSKRRWYFPLTAHNNLCVAVDQLRRQHYRETGVVLALSPIPNDVLRQLSIQTDGERLAESESQKQAHDKLGKLLPRRLLEALAPFQREGVSFVVDREGRGLIADEMGLGKTIQAIAVACVYKAEWPLLVMCPSSARYHWEAELLKWLDRDVLKKEEIQVVKAGRERLHETSKVVILSYSLALRLKEVLRAPVRSAGVAVGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWSDMSSFIRRYCTGGR-GRKTSGPGKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILTGLPPKRRTFHKLTVPEQAIRGKLEGALEALSIVSAT-----XXXXXXXXXXXXXXXXXXESEDLYATLARQRREQRARESGTGAVPP------------------GGEEGKGVAGAGANRQSVEASQGEGEMGEPGSGVA---MEDWSAREIQQRKKVLLMEVFRLTGTAKIPLAVDRVKALLASELSGKFLVFAHHMNVMNGIEDGCLRDVPHIRIDGSTPPPERQARVDTFQTDTGVRVALLSLTAAGLALTLTAASRVLFAELFWTPGALLQAEDRCHRIGQTSEVEVEYLLARGTLDDALWPLIRRKMRVLGELVEGAEGLDLE 965          
BLAST of NO03G02210 vs. NCBI_GenBank
Match: CBN77580.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 469.2 bits (1206), Expect = 4.300e-128
Identity = 298/730 (40.82%), Postives = 413/730 (56.58%), Query Frame = 0
Query:  366 QQHFERPRYDSLS-YSA----GPSIQFAVSSGGEFSAKLTGAVPEGVISSFRLTPGARHKKSKRRWYFPLVAHNNLKVAVEQLRRQLYRDTGVILTLSPIPDDVLRQLSINKDGHKLAESDAQKRAHDKLV-SLLPRRLLDALAPFQREGVAFVVGREGRGLIADEMGLGKTIQAIAIATVYRVEWPLLVMCPSSARFQWEAELLKWLDRDVLKKEEIQVMTAGKEKLHDS-AKVVILSYDLALRLKETLRKPVRSAGTAAGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWRDQSSFIDRYCTGGKVGGRTAGAKKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILKGLPPKRRIFHKLAVPEPALREQLERALEGLSIVSATAXXXXXXXXXXXXXXXXXXXXXXXPDDLYSTLARQHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGGERTVLEA--TXXXXXXXXXXSFKADAAAVTGRGMTEEEMAEWSARDIHQRKKMILMEVFKLTGTAKIPLAIDRVREILASEL-GGKVLIFAHHRNVLDGIEKGCL--DGVRHIRIDGGTAPRERQAQVERFQTDAGIRVALLSLTAAGLALTLTAANRALFVELFWTPASLLQAEDRCHRIGQTSEVEIEYLLAEGTLDDALWPLIRRKMRVLGELVEG-AEGLDME-ESSVKKEK 1082
            Q   +RPRY+  S Y A      ++ F++ S   F+AK+    P  V + F+LTPGA + + +RRW FPL AH NL  A+ +   Q+           P+P   L   ++  +  + A  D +K    KL   ++P  +   LAPFQ++GV FV+ +EGR +IADEMGLGKTIQAI  A  Y  EWPLL++ PSSAR+ W+ ELLKWLD D + K++I V++  K+ L+    KVVI+SY+L  R+KE L                  F VVV DECHYLKN  A RT+ ++PL  +A RAILLSGTPALSRP EL+TQLN+L+   W     F  RYC G K  G+    K K+     GA+++ ELH +L+ATVMVRR KK+ILK LPPK+R   ++ V +   R +L+   + LS+++                               S  A                                     G  T L A             S   D+           ++A+ +  ++ Q ++ +LM++F  TGTAKIP  I  V ++LA E+ GGK+L+FAHHRNVLD +E+  +    V +IRIDG T P++RQ  V+ FQ++  +RVALL LTAAG+ +TLTAA+R +F EL+WTPA LLQAEDRCHRIGQ + V+++YL+A+G+LDDALWPLI+ K+++LGE+VEG  E   ME ESS  ++K
Sbjct:   36 QAGMKRPRYEERSQYEADENQAGTVTFSLISTSFFTAKIRKPTPAAVHTYFKLTPGATYDEKERRWKFPLGAHENLAGALSRQGVQVV----------PVPRQALAAATLAVEPEQGA--DGEKEPPVKLCEKMVPECIRKHLAPFQKQGVEFVLKKEGRAMIADEMGLGKTIQAICCAAAYESEWPLLIVSPSSARYHWQHELLKWLDEDSITKKQIVVVSKSKQDLNRGVTKVVIISYELVNRMKEEL--------------DLFNFGVVVCDECHYLKNQRAARTRAIVPLATKARRAILLSGTPALSRPSELFTQLNLLSAATWASFRDFGKRYCAGKKGKGK----KGKFGADFSGASHIAELHALLRATVMVRRLKKNILKHLPPKQRSLVEVHVQDEGARRELQ---QDLSVLATRHHARLGRLAKTHADKPSEIVESGSSASSQSKDASPSAAAVVARPKTSNPSRTDAPKGKGNGRQPKVGPGAGRVTKLSALPPAPVSKEVTVPSSTQDSTNGDVAEPPTRDVADMTKAELAQERRSLLMKLFANTGTAKIPAVIRHVSDVLADEMTGGKILVFAHHRNVLDALEQSVVRTGRVEYIRIDGRTKPKDRQDLVDTFQSNPSVRVALLGLTAAGIGITLTAASRVVFAELYWTPAQLLQAEDRCHRIGQATVVKVQYLVAKGSLDDALWPLIQEKIKLLGEMVEGEGEANHMEVESSAPRQK 732          
BLAST of NO03G02210 vs. NCBI_GenBank
Match: XP_009041131.1 (hypothetical protein AURANDRAFT_39147, partial [Aureococcus anophagefferens] >EGB04145.1 hypothetical protein AURANDRAFT_39147, partial [Aureococcus anophagefferens])

HSP 1 Score: 392.9 bits (1008), Expect = 3.900e-105
Identity = 266/706 (37.68%), Postives = 368/706 (52.12%), Query Frame = 0
Query:  368 HFERPRYDSLSYSAGPSIQFAVSSGGEFSAKLTGAVPEGVISSFRLTPGARHKKSKRRWYFPLVAHNNLKVAVEQLRRQLYRDTGVILTLSPIPDDVLRQLSINKDGHKLAESDAQKRAHDKLVSLLPRRLLDALAPFQREGVAFVVGREGRGLIADEMGLGKTIQAIAIATVYRVEWPLLVMCPSSARFQWEAELLKWL-DRDVLKKEEIQVMTAGK---EKLHDSAKVVILSYDLALRLKETLRKPVRSAGTAAGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWRDQSSFIDRYCTGGK-----VGGRTAGAKKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILKGLPPKRRIFHKLAVPEPALREQLERALEGLSIVSATAXXXXXXXXXXXXXXXXXXXXXXXPDDLYSTLARQHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGGERTVLEATXXXXXXXXXXSFKADAAAVTGRGMTEEEMAEWSARDIHQRKKMILMEVFKLTGTAKIPLAIDRVREIL----ASELGGKVLIFAHHRNVLDGIEKGCLDGVRHIRIDGGTAPRERQAQVERFQTDAGIRVALLSLTAAGLALTLTAANRALFVELFWTPASLLQAEDRCHRIGQTSEVEIEYLLAEGTLDDALWPLIRRKMRVL 1061
            H+  P    L YS    +  +V+S   F       +P   ++  R TPGA  K +  +W  PL  H N  VA++  R          +    IP  VL  L+        A+ D            +PR + +ALAPFQ+ GV+++V   GR L+ADE GLGKTIQAI  A  Y  EWP+LV+ PSSARF WEAE L+WL D D L ++ I V+T+ +       D AK+++ SYDL  R  E +RK +                V++ DECHYLKN  AQRTK LLP++  + RAILLSGTPALSRP E++ QL+ L+ + W D + F  RYC+G +           G KKK       A+NL ELH +L+AT+M+RR K  IL  LPPKRR+  K+++ + +L  +L   LE      A+                         +D + TL+                                        T L                +  A +    +   EM     +++  +KK +LME+F+ +G AK+P    R+ ++L         GK+L+FAHHR VLD +  G L  +++IRIDG T  ++RQ++V  FQ DA +RVALL +TAAG+ALTLTAA+R +F EL+WTPA+LLQAEDR HRIGQTSEV +EYLLA+  +D+ LWPLI+ KM +L
Sbjct:   92 HYHNP----LFYS---PLTLSVASPSTFKITCESTLPPACVTIARSTPGAVLKDN--QWELPLSQHVNFCVAMQNER----------IVCERIPQRVLASLA-------TAQLD------------IPRSIWNALAPFQKYGVSWIVRNNGRALLADEPGLGKTIQAIGAACAYYHEWPVLVVSPSSARFHWEAEFLQWLPDEDYLPRDGILVITSERIAATTAVDRAKILVTSYDLVHR--EAVRKTLTRVAP----------NVIICDECHYLKNGKAQRTKALLPIIKASRRAILLSGTPALSRPMEVFWQLHALDDKQWTDPADFNKRYCSGRRKKDDPKDTNEDGEKKK---EYSAASNLEELHTLLRATLMLRRNKASILTQLPPKRRVQRKVSIDDVSLALELRSDLEEFR-ARASELAELSNNQKRARRKRSKRSWLGVKEDTHVTLS----------------------------------------TTL----------------SGYATIEREDLQSPEMVR---KEMAAKKKALLMELFRRSGPAKLPAIERRISDLLHGVDEERFSGKMLVFAHHRKVLDTLANGILRDIKYIRIDGTTPAKDRQSRVTTFQNDAKVRVALLGITAAGIALTLTAASRVIFTELYWTPAALLQAEDRAHRIGQTSEVVVEYLLADDCVDEILWPLIQHKMLML 684          
BLAST of NO03G02210 vs. NCBI_GenBank
Match: GAX25243.1 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Fistulifera solaris])

HSP 1 Score: 323.6 bits (828), Expect = 2.900e-84
Identity = 220/610 (36.07%), Postives = 297/610 (48.69%), Query Frame = 0
Query:  494 LPRRLLDALAPFQREGVAFVVGREGRGLIADEMGLGKTIQAIAIATVYRVEWPLLVMCPSSARFQWEAELLKWLDRD---------VLKKEEIQVMTAGKEKL--HDSAKVVILSYDLALRLKETLRKPVRSAGTAAGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRA---WRDQSSFIDRYCTGGKVGGRTAGAKKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILKGLPPKRRIFHKLAVPEP----ALREQLERALEGLSI----------VSATAXXXXXXXXXXXXXXXXXXXXXXXPDDLYSTLARQHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGGERTVLEATXXXXXXXXXXSFKADAAAVTGRGMTEEEMAEWSARDIHQRKKMILMEVFKLTGTAKIPLAIDRVREILASELGGKVLIFAHHRNVLDGIEKGC------LDG-VRHIRIDGGTAPRERQAQVERFQTDAGIRVALLSLTAAGLALTLTAANRALFVELFWTPASLLQAEDRCHRIGQTSEVEIEYLLAEGTLDDALWPLIRRKMRVLGELVEGAE 1069
            LP RL  ALAPFQR GV FV+ ++GR +IAD+MGLGKTIQAIA  ++Y  EWPLLV+CPSSAR+ WE+E L WL +D          L + +I  ++  K+++    S KV+I SY L   L E+ +                 F   + DE H LKN  ++RT  LLP+L    R +LLSGTPAL+RP ELW QL +L       W D+++F+D+Y   G                   A +  ELH ML  TVM+RR K DILK LP K R      V  P      ++ L +  +G             +S T                         D + S  A+  R                                   +  LE+                 A+  G+  T +            ++  +L  +++ TG  KIP+ +D ++  L     GK+ IFAHH +VLD I           DG  + IRIDG T P++RQ Q++ FQTD   R+ALL +TAAG+A+TLTA++   F ELFWTPA ++QAEDRCHRIGQ + V+  Y +A GT+DD LW LI +K   LGE VEG E
Sbjct:  571 LPLRLAKALAPFQRGGVDFVLSKDGRAMIADDMGLGKTIQAIASMSIYFQEWPLLVLCPSSARYHWESEFLLWLGKDSDNSHDDNSSLSQSQINDLSTSKDEIFPSQSTKVIICSYGLVTTLVESRK------------ITPGMFDCAIVDESHMLKNKSSKRTSRLLPVLTATKRCVLLSGTPALARPAELWPQLLILGTERHGWWDDEAAFVDKYVRNG------------------NAESSAELHTMLTGTVMIRRLKADILKSLPRKLREKASFQVLGPNEQLEFKDLLAKLRQGKGTLGQLARIEHHLSLTGPNTSNNAQTIGGGLSTEPVQCEIQDAIKSLEAQVERSEMEGRIRIQNTLNQVVHQLSQDRYEFL-------KMQLESDFNSRIESQLKQGMDAIASRFGQNHTNQH---------ESKRTRVLARLYERTGQVKIPIIVDILKRWLNDPTKGKLCIFAHHLSVLDAIRDLADLSNRESDGKYKFIRIDGSTNPKQRQEQIQIFQTDPTTRIALLGITAAGVAVTLTASSTVWFAELFWTPAIMIQAEDRCHRIGQQARVQCLYFVARGTIDDILWRLIEKKFTDLGEFVEGKE 1134          
BLAST of NO03G02210 vs. NCBI_GenBank
Match: GAX16947.1 (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [Fistulifera solaris])

HSP 1 Score: 323.6 bits (828), Expect = 2.900e-84
Identity = 229/658 (34.80%), Postives = 309/658 (46.96%), Query Frame = 0
Query:  454 ILTLSPIPDDVLRQLSINK----DGHKLAESDAQKRAHDKLVSLLPRRLLDALAPFQREGVAFVVGREGRGLIADEMGLGKTIQAIAIATVYRVEWPLLVMCPSSARFQWEAELLKWL-------------DRDVLKKEEIQVMTAGKEKL--HDSAKVVILSYDLALRLKETLRKPVRSAGTAAGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRA---WRDQSSFIDRYCTGGKVGGRTAGAKKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILKGLPPKRRIFHKLAVPEP----ALREQLERALEGLSI----------VSATAXXXXXXXXXXXXXXXXXXXXXXXPDDLYSTLARQHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGGERTVLEATXXXXXXXXXXSFKADAAAVTGRGMTEEEMAEWSARDIHQRKKMILMEVFKLTGTAKIPLAIDRVREILASELGGKVLIFAHHRNVLDGIEKGC------LDG-VRHIRIDGGTAPRERQAQVERFQTDAGIRVALLSLTAAGLALTLTAANRALFVELFWTPASLLQAEDRCHRIGQTSEVEIEYLLAEGTLDDALWPLIRRKMRVLGELVEGAE 1069
            + T+  IP   L+  S+ +     G+  AE   +K         LP RL  ALAPFQR GV FV+ ++GR +IAD+MGLGKTIQAIA  ++Y  EWPLLV+CPSSAR+ WE+E L WL             D   L   +I V++  K+++    S KVVI SY L   L E+ +                 F   + DE H LKN  ++RT  LLP+L    R +LLSGTPAL+RP ELW QL +L       W D+++F+D+Y   G                   A +  ELH ML  T+M+RR K DILK LP K R      +  P      R+ L +  +G             +S T                         D + S  A+  R                                   +  LE                  A+  G+ +  +            ++  +L  +++ TG  KIPL +D ++  L     GK+ IFAHH +VLD I           DG  + IRIDG T P++RQ Q++ FQ D   R+ALL +TAAG+A+TLTA++   F ELFWTPA ++QAEDRCHRIGQ + V   Y +A GT+DD LW LI +K   LGE VEG E
Sbjct:  582 LTTVEGIPQHQLQVASVERARQAQGYPSAEQLQEKG--------LPLRLAKALAPFQRGGVDFVLSKDGRAMIADDMGLGKTIQAIASMSIYFQEWPLLVLCPSSARYHWESEFLLWLGEGTMADDDNFHEDNSCLSPSQINVLSTSKDEIFPSQSTKVVICSYGLVTTLVESRK------------ITPGMFDCAIVDESHMLKNKSSKRTSRLLPVLTATKRCVLLSGTPALARPAELWPQLLILGTERHGWWDDEAAFVDKYVRNG------------------SAESSAELHTMLTGTIMIRRLKADILKSLPRKLREKASFQILGPDEQVEFRDLLAKLRQGKGTLGQLARIEHHLSITGPNGSNNAQTIAGSLSTEPVQGEIQDAIKSLEAQVERSEMEGRIRIQTTLNQVSHQLSQDRYDFL-------KMQLETDFNSRIESQLKQGMDAIASRFGQNLLNQN---------ESKRTRVLARLYERTGQVKIPLVVDLLKRWLNDPTKGKLCIFAHHISVLDAIRDLANLSNRESDGKCKFIRIDGSTNPKQRQEQIQIFQNDPTTRIALLGITAAGVAVTLTASSTVWFAELFWTPAIMIQAEDRCHRIGQQARVRCLYFVARGTIDDILWRLIEKKFTDLGEFVEGKE 1185          
BLAST of NO03G02210 vs. NCBI_GenBank
Match: XP_005826013.1 (hypothetical protein GUITHDRAFT_76774, partial [Guillardia theta CCMP2712] >EKX39033.1 hypothetical protein GUITHDRAFT_76774, partial [Guillardia theta CCMP2712])

HSP 1 Score: 320.9 bits (821), Expect = 1.900e-83
Identity = 227/647 (35.09%), Postives = 315/647 (48.69%), Query Frame = 0
Query:  424 RRWYFPLVAHNNLKVAVEQLRRQLYRDTGVILTLSPIPDDVLRQLSINKDGHKLAESDAQKRAHDKLVSLLPRRLLDALAPFQREGVAFVVGREGRGLIADEMGLGKTIQAIAIATVYRVEWPLLVMCPSSARFQWEAELLKWLDRDVLKKEEIQVMTAGKEKLHDSAKVVILSYDLALRLKETLRKPVRSAGTAAGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWRDQSSFIDRYCTG--GKVGGRTAGAKKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILKGLPPKRRIFHKLAVPEPALREQLERALEGLSIVSATAXXXXXXXXXXXXXXXXXXXXXXXPDDLYSTLARQHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGGERTVLEATXXXXXXXXXXSFKADAAAVTGRGMTEEEMAEWSAR-DIHQRKKMILMEVFKLTGTAKIPLAIDRVREILASELGGKVLIFAHHRNVLDGIEK-GCLDGVRHIRIDGGTAPRERQAQVERFQTDAGIRVALLSLTAAGLALTLTAANRALFVELFWTPASLLQAEDRCHRIGQTSEVEIEYLLAEGTLDDALWPLIRRKMRVLGELVEG 1067
            +RW FPL  +   K+  E  R    +      +L+P+P++V + L  +     L  + A+      L+  LP  +   L PFQREGV F + REGR LI DEMGLGKT+QAIAIA  Y  EWPLL++CPSS R  W  EL+ WL  + L  +++  + +G++ + +   V I+SYDL  +               A      +F+V++ DE HYLKN  A+R+K +LP +  A R+ILL+GTPALSRP EL+  LN L+ R + +   F  RYC    G  G  T+           GA+NL ELH +L    MVRR KKD+L  LP KRR            ++ L +  E  S   AT                          D    L R                                                                    +T++E  +  AR     RKK ++M+++  TG AK+    + V +++  E G K L+FAHH  +LDG+E       V++IRIDG T  RERQ +V  FQ  + +RVA+LS+TAAG  LTLTAAN  +F EL WTP  LLQAEDR HRIGQ S V + YL+ +GT D+ +W  I  K++V+G  ++G
Sbjct:    9 KRWVFPLCQY--YKLVNEISRMNATQPANSTFSLTPVPENVFKVLKNDPSVSTLNHTKAK-----MLLEALPLTISKKLLPFQREGVLFGLAREGRVLIGDEMGLGKTVQAIAIAAAYLDEWPLLIVCPSSMRCMWAQELVNWLPGE-LTPQDVNTIFSGRDVVGNQL-VTIISYDLFCKF--------------APEISSMQFKVIIGDESHYLKNPNAKRSKTILPFIRSARRSILLTGTPALSRPVELFNLLNSLHPRLFNNFLEFAYRYCDAHQGPFGLETS-----------GASNLEELHVLLDQHTMVRRLKKDVLTQLPAKRR------------QKILIKISEAESKRFATEM------------------------DKLKELER--------------------------------------------------------------------VTQDEEEDSEARFRAQSRKKALIMKMYVDTGVAKLQAIQEYVADLI--ECGAKFLVFAHHMEILDGLEDVVSKKKVQYIRIDGSTPSRERQLRVSSFQESSSVRVAILSVTAAGTGLTLTAANLVVFAELHWTPGILLQAEDRAHRIGQQSSVNVMYLVGQGTCDELIWDSISYKVKVIGRALDG 515          
BLAST of NO03G02210 vs. NCBI_GenBank
Match: XP_016604538.1 (hypothetical protein SPPG_08087 [Spizellomyces punctatus DAOM BR117] >KNC96498.1 hypothetical protein SPPG_08087 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 316.6 bits (810), Expect = 3.500e-82
Identity = 230/688 (33.43%), Postives = 336/688 (48.84%), Query Frame = 0
Query:  405 EGVISSFRLTPGARHKKSKRRWYFPLVAHNNLKVAVEQLRRQLYRDTGVILTLSPIPDDVLRQLSINKDGHKLAESDAQKRAHDKLVSLLPRRLLDALAPFQREGVAFVVGREGRGLIADEMGLGKTIQAIAIATVYRVEWPLLVMCPSSARFQWEAELLKWLDRDVLKKEEIQVMTAGKEKLHDSAKVVILSYDLALRLKETLRKPVRSAGTAAGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWRDQSSFIDRYCTGGKVGGRTAGAKKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILKGLPPKRR------IFHKLAVPEPALREQLERALEGLSIVSATAXXXXXXXXXXXXXXXXXXXXXXXPDDLYSTLARQHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGGERTVLEATXXXXXXXXXXSFKADAAAVTGRGMTEEEMAEWSARDIHQRKKMILMEVFKLTGTAKIPLAIDRVREILASELGGKVLIFAHHRNVLDGIEKGCLD-GVRHIRIDGGTAPRERQAQVERFQTDAGIRVALLSLTAAGLALTLTAANRALFVELFWTPASLLQAEDRCHRIGQTSEVEIEYLLAEGTLDDALWPLIRRKMRVLGELVEGAEGL--DMEESSVKKEKGK 1084
            E +   F     A      + W F    ++ +   +E L     ++ G +  ++ +P  V + L   K   K  E+D+       + + +P  + + L  FQ+ GV   + ++G+ L+ DEMGLGKTIQAIAI   YR EWP++V+CPSS R  W+AE+ KWLD   L +E IQV+ A K+++   +  VI SYDLA R  E ++K +          ++A++R+VVADE H+LK+  A+RTK ++PLL  A RA+LLSGTPALSRP EL+TQ++ L   ++     F  RYC          G + ++     G +N+ ELH  L+ TV++RR KKD+LK LP K R      I  K      AL  Q E   E L                               +D  +    +HR                                                                            +++   K+ +L+++++ TG AK+P   + +RE L      K ++FAHH +VLD + +       R++RIDG T+ + RQ   E FQ D   RVA+LS+TAAG+ LTL AA+  +F ELFW PA LLQ EDR HRIG+   V+I+Y+LA GTLDD  WPLIRRK+ V+G+ ++G       +E SS + EK K
Sbjct:  115 EAIPKIFHAVKDAEWDSEAKVWIFDSGRYDEVIKKLEDL-----KNDGFLPRINELPTFVHKLL---KTPQKSTETDS--NILQSMQTKIPPYVYERLMDFQKVGVLEAIKKQGKVLLGDEMGLGKTIQAIAICAFYRSEWPVMVICPSSLRLTWQAEICKWLD---LPEERIQVIFASKDRVSSESHFVITSYDLASR--EDIKKQL----------EKAKYRIVVADESHFLKSREAKRTKTIIPLLKGAKRALLLSGTPALSRPIELFTQISALL-PSFTTAVQFGVRYCD---------GKQNRYGWDFTGNSNIAELHWFLEQTVLIRRLKKDVLKELPSKTRQCVYVDIAAKSKQTFAALMAQNEEINERL-------------------------------EDAKTASNTKHR----------------------------------------------------------------------------QEVTLEKRTLLIQMYRETGIAKLPAVQEYLRE-LHDHTSKKFIVFAHHTHVLDTVSEQLNQLKTRYVRIDGSTSSQVRQDLCEEFQNDPETRVAVLSITAAGVGLTLHAADLVVFAELFWNPAQLLQGEDRAHRIGREENVDIKYILARGTLDDIQWPLIRRKLDVVGQSIDGHSATMDTIESSSARDEKEK 659          
BLAST of NO03G02210 vs. NCBI_GenBank
Match: PRW20657.1 (SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A 1 isoform X1 [Chlorella sorokiniana])

HSP 1 Score: 312.4 bits (799), Expect = 6.700e-81
Identity = 230/666 (34.53%), Postives = 323/666 (48.50%), Query Frame = 0
Query:  405 EGVISSFRLTPGARHKKSKRRWYFPLVAHNNLKVAVEQLRRQLYRDTGVILTLSPIPDDVLRQLSINKDGHKLAESDAQKRAHDKLVSLLPRRLLDALAPFQREGVAFVVGREGRGLIADEMGLGKTIQAIAIATVYRVEWPLLVMCPSSARFQWEAELLKWLDRDVLKKEEIQVMTAGKE--KLHDSAKVVILSYDLALRLKETLRKPVRSAGTAAGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWRDQSSFIDRYCTGGKVGGRTAGAKKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILKGLPPKRRIFHKLAVPEPALREQLERALEGLSIVSATAXXXXXXXXXXXXXXXXXXXXXXXPDDLYSTLARQHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGGERTVLEATXXXXXXXXXXSFKADAAAVTGRGMTEEEMAEWSARDIHQRKKMILMEVFKLTGTAKIPLAIDRVREILASELGGKVLIFAHHRNVLDGIEKGC--LDGVRHIRIDGGTAPRERQAQVERFQTDAGIRVALLSLTAAGLALTLTAANRALFVELFWTPASLLQAEDRCHRIGQTSEVEIEYLLAEGTLDDALWPLIRRKMRVLGELVEG 1067
            E V ++ +  PG +     R W FPL  H+ L  A++ L     R    +  L P+   VLR  S N D     +SD            LP+ L   L PFQREGV F + R GR LI DEMGLGKT+QAIA+A  YR EWPLLV+ PSS R  W   L +WL+   L ++++ ++  GK+  K+  + + +I+SY+   ++   L K  R A              VVADE H LK + AQRTK  +PL+ EA RAILLSGTPAL++P+E++ QL+ L   A    S+F +RYC G                +  GA+NL EL+ MLK++V+VRR K+D+L  LP KRR    L      L  + ++ L GL                               D +   +  + R                                                       A   AV+G       MA+            ++ E++K T   K     + V+ +L  + G K LIFAHH ++LD IE  C    G +HIRIDG T P +RQ+ V +FQ +A +RVA+LS+ AAG  LTLTAA+  +F E+ WTP  ++QAEDR HRIGQ S V + +L A+G+ DD +W  + +K+  +GE ++G
Sbjct:  139 EAVSAALKRLPGGQWDPKSRHWRFPLTQHDRLVQALQALTSVRVR----LEPLHPLVTAVLRAASSNPD-----DSDR--------YCTLPKDLEQQLMPFQREGVKFALRRGGRVLIGDEMGLGKTVQAIAVAAAYRDEWPLLVIAPSSLREAWADALHRWLN---LTEDKMHIVHGGKDAAKVPSNVQCLIISYNFVQKM--DLGKKFRVA--------------VVADESHSLKESSAQRTKATIPLIKEARRAILLSGTPALNKPKEIFQQLSALVPSAKLKMSAFGERYCQGNHF------------DKYGGASNLGELNAMLKSSVLVRRLKRDVLTQLPSKRRQQVIL-----CLDSEAKKMLAGLQ---------------------------KQLDTVRQLMGEEAR----------------------------------------------------KSAASGGAVSG------SMAQ----------NTVITELYKKTAEVKAKAVQEYVQLLL--DNGQKFLIFAHHTSLLDAIEHTCNRHKGCQHIRIDGSTPPAQRQSLVNKFQENADVRVAILSIKAAGTGLTLTAASTVVFAEMTWTPGEIIQAEDRAHRIGQASSVNVIFLFAKGSSDDLIWASLEKKLDTVGEAIDG 654          
BLAST of NO03G02210 vs. NCBI_GenBank
Match: XP_016604537.1 (hypothetical protein, variant [Spizellomyces punctatus DAOM BR117] >KNC96497.1 hypothetical protein, variant [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 312.0 bits (798), Expect = 8.700e-81
Identity = 215/599 (35.89%), Postives = 304/599 (50.75%), Query Frame = 0
Query:  494 LPRRLLDALAPFQREGVAFVVGREGRGLIADEMGLGKTIQAIAIATVYRVEWPLLVMCPSSARFQWEAELLKWLDRDVLKKEEIQVMTAGKEKLHDSAKVVILSYDLALRLKETLRKPVRSAGTAAGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWRDQSSFIDRYCTGGKVGGRTAGAKKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILKGLPPKRR------IFHKLAVPEPALREQLERALEGLSIVSATAXXXXXXXXXXXXXXXXXXXXXXXPDDLYSTLARQHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGGERTVLEATXXXXXXXXXXSFKADAAAVTGRGMTEEEMAEWSARDIHQRKKMILMEVFKLTGTAKIPLAIDRVREILASELGGKVLIFAHHRNVLDGIEKGCLD-GVRHIRIDGGTAPRERQAQVERFQTDAGIRVALLSLTAAGLALTLTAANRALFVELFWTPASLLQAEDRCHRIGQTSEVEIEYLLAEGTLDDALWPLIRRKMRVLGELVEGAEGL--DMEESSVKKEKGK 1084
            +P  + + L  FQ+ GV   + ++G+ L+ DEMGLGKTIQAIAI   YR EWP++V+CPSS R  W+AE+ KWLD   L +E IQV+ A K+++   +  VI SYDLA R  E ++K +          ++A++R+VVADE H+LK+  A+RTK ++PLL  A RA+LLSGTPALSRP EL+TQ++ L   ++     F  RYC          G + ++     G +N+ ELH  L+ TV++RR KKD+LK LP K R      I  K      AL  Q E   E L                               +D  +    +HR                                                                            +++   K+ +L+++++ TG AK+P   + +RE L      K ++FAHH +VLD + +       R++RIDG T+ + RQ   E FQ D   RVA+LS+TAAG+ LTL AA+  +F ELFW PA LLQ EDR HRIG+   V+I+Y+LA GTLDD  WPLIRRK+ V+G+ ++G       +E SS + EK K
Sbjct:    5 IPPYVYERLMDFQKVGVLEAIKKQGKVLLGDEMGLGKTIQAIAICAFYRSEWPVMVICPSSLRLTWQAEICKWLD---LPEERIQVIFASKDRVSSESHFVITSYDLASR--EDIKKQL----------EKAKYRIVVADESHFLKSREAKRTKTIIPLLKGAKRALLLSGTPALSRPIELFTQISALL-PSFTTAVQFGVRYCD---------GKQNRYGWDFTGNSNIAELHWFLEQTVLIRRLKKDVLKELPSKTRQCVYVDIAAKSKQTFAALMAQNEEINERL-------------------------------EDAKTASNTKHR----------------------------------------------------------------------------QEVTLEKRTLLIQMYRETGIAKLPAVQEYLRE-LHDHTSKKFIVFAHHTHVLDTVSEQLNQLKTRYVRIDGSTSSQVRQDLCEEFQNDPETRVAVLSITAAGVGLTLHAADLVVFAELFWNPAQLLQGEDRAHRIGREENVDIKYILARGTLDDIQWPLIRRKLDVVGQSIDGHSATMDTIESSSARDEKEK 470          
BLAST of NO03G02210 vs. NCBI_GenBank
Match: XP_004995909.1 (hypothetical protein PTSG_03334 [Salpingoeca rosetta] >EGD82673.1 hypothetical protein PTSG_03334 [Salpingoeca rosetta])

HSP 1 Score: 309.3 bits (791), Expect = 5.700e-80
Identity = 225/646 (34.83%), Postives = 311/646 (48.14%), Query Frame = 0
Query:  426 WYFPLVAHNNLKVAVEQLRRQLYRDTGVILTLSPIPDDVLRQL--SINKDGHKLAESDAQKRAHDKLVSLLPRRLLDALAPFQREGVAFVVGREGRGLIADEMGLGKTIQAIAIATVYRVEWPLLVMCPSSARFQWEAELLKWLDRDVLKKEEIQVMTAGKEKLHDSAKVVILSYDLALRLKETLRKPVRSAGTAAGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWRDQSSFIDRYCTGGKVGGRTAGAKKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILKGLPPKRRIFHKLAVPEPALREQLERALEGLSIVSATAXXXXXXXXXXXXXXXXXXXXXXXPDDLYSTLARQHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGGERTVLEATXXXXXXXXXXSFKADAAAV-TGRGMTEEEMAEWSARDIHQRKKMILMEVFKLTGTAKIPLAIDRVREILASELGGKVLIFAHHRNVLDGIEKG-CLDGVRHIRIDGGTAPRERQAQVERFQTDAGIRVALLSLTAAGLALTLTAANRALFVELFWTPASLLQAEDRCHRIGQTSEVEIEYLLAEGTLDDALWPLIRRKMRVLGELVEGA 1068
            W  PL  +  L   + +L       T V   ++ +P  VL  +  S       L  +   ++A++ L   +P  LL  L P+Q  GV   V R GR L  DEMGLGKT+QA+  A  YR EWPLL++CPSS +  W  E+ +WL    L ++ +QV+  G+EKL  +  V ILSYDLA  L+  +              QQ +FRVV+ADE HY+KN  A RTK L+P++ +A RA+LLSGTPALS+P EL+ QL  L    +R + +F +RYC               +     G++N  ELH +L+ TVM+RR KK +L  LPPK R   +  V + + + + E                                         S L ++                                                       F  DAAAV  GRG  E          +H     + +++F+ TG AK+   +  V E LA   G K+L+FAHH+ V+DG+ +  C   +RH+RIDG T    R     RFQTD   RVALLS+TAAG  LTL AA   +F ELFW P  LLQAEDR HR+GQ   V+++YL+   TLD+++W  + RKM V+G  V+GA
Sbjct:  184 WVLPLRMYKTLLTKLHEL-------TAVETRITGLPKWVLAAMHSSTWNTLELLHSTVTPEQAYEALQGRVPLELLQKLLPYQLTGVLCAVRRSGRILWCDEMGLGKTVQALVTALHYRSEWPLLIVCPSSLKLTWANEIHRWLG---LGEDAVQVVQNGREKL--THAVCILSYDLARGLRTQV--------------QQRKFRVVIADEAHYIKNRQAARTKALVPVVQDAKRALLLSGTPALSKPIELFQQLRALRRDLFRVEIAFGERYCNSHMTA---------YGWCHDGSSNEEELHTLLQRTVMIRRDKKGVLSSLPPKTR---QTVVVDCSAKHRRE----------------------------------------ISQLMKKR------------------------------------------------------FHMDAAAVAAGRGDGE----------MHG----VTLKLFQATGQAKLAACVTYVLEQLAK--GVKMLLFAHHQPVMDGLMQALCEKSIRHVRIDGSTPSSLRNELATRFQTDETCRVALLSITAAGTGLTLHAATLVVFAELFWNPGQLLQAEDRAHRVGQQCAVDVKYLICRNTLDESMWEKVERKMAVVGRAVKGA 681          
The following BLAST results are available for this feature:
BLAST of NO03G02210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29676.13.800e-27074.01zinc finger ran-binding domain-containing protein ... [more]
CBN77580.14.300e-12840.82conserved unknown protein [Ectocarpus siliculosus][more]
XP_009041131.13.900e-10537.68hypothetical protein AURANDRAFT_39147, partial [Au... [more]
GAX25243.12.900e-8436.07SWI/SNF-related matrix-associated actin-dependent ... [more]
GAX16947.12.900e-8434.80SWI/SNF-related matrix-associated actin-dependent ... [more]
XP_005826013.11.900e-8335.09hypothetical protein GUITHDRAFT_76774, partial [Gu... [more]
XP_016604538.13.500e-8233.43hypothetical protein SPPG_08087 [Spizellomyces pun... [more]
PRW20657.16.700e-8134.53SWI SNF-related matrix-associated actin-dependent ... [more]
XP_016604537.18.700e-8135.89hypothetical protein, variant [Spizellomyces punct... [more]
XP_004995909.15.700e-8034.83hypothetical protein PTSG_03334 [Salpingoeca roset... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL067nonsL067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR001ncniR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR049ngnoR049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005665NSK005665Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G02210.1NO03G02210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|549100gene_1407Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100299g2gene960Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G02210.1NO03G02210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G02210 ID=NO03G02210|Name=NO03G02210|organism=Nannochloropsis oceanica|type=gene|length=4030bp
ATGGTCGACGTCCAAGCTGAAGCACCACTGCTAGAACCGCTACCTGTTTC
TGCTGAAGTAGATGAACATTTAGTGGATTCGCTTCCGGAAGAGGGCGGGG
AGCAATGTGATCGGACGCAGCAGCTGCAGCAACAGCAACAGCCACAGCAG
CAGCAACAGCAGCAGCCTCAGGGACAGCTACAGCAGCAGTGGGACGAGGA
GGAGGATAACGAGGAGATAGATGACAAGGAGGAAGGTGGAGAGCACGTGG
AGGAAGAGTTGGGGAAGGGCCAGCAGCCCCCGCAGTCCCCGCAGCAGCAG
CAGCAGCAGTCGATCGACCTAACTCTGGATGATACCGAGGATGAGGAGGA
GGACTATGACCAGGGGAAGGAGGAGGACGGAGAGAGTACGGAGGACGAAG
CAGAGAGACTCCTTCCGGAGCAGCACAAACACCAACAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAACAACAACAGCAGCAACAGCAGCAACA
GCAGCAGCAGCACCTAGGTGATCCTCCCTCGGCTGCTGCACCTGGTGTTG
CTTACCACGGAAATTATAAGGACCTCCAGAATTCGACACAGCCTCCATCA
GCTAACCCCATCCAGCAGGTGTATCAGAACTTGGCTCAGCAGCAAAGTCC
ACGCCAAGGAGGGGGAGAAGGGGGAGGAGGGGGAGGAGGTCCGGTGCGAG
CAGCCATGCCATTGGCAGCAGTCGCCACGCCCAACGAACACCTCCGCCTC
AAGCACCAAGCTTTTTTAGCGGAGCAAGAGTACTACCGCCAGCAAGAAAT
GAAGCGTCAACCCAGCACCTTGCCGCGAGTGCCCAACATCTCAACATCTG
CCTTTCTGAAAGGTTCGGCTACCATGTTGCGAGTGGAACCATCCTCCTCC
TTTTTATCGTCATCATCGCACCACCATCAGCAGGTCGGGAGCGAAGGGGG
GCTTGCGCAGTTGCTACCCCACTCCATGCTGGCAGGAGGACACCCAAGTC
CTTACCACCCGAGTTATATCCAAAACAGTGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGATATGCAGGCGCGACGCAGCA
GCATTTTGAGAGACCTCGTTATGATAGTCTGTCGTATTCTGCGGGGCCCA
GCATTCAATTTGCTGTTTCTTCGGGCGGTGAATTTAGCGCAAAGCTCACA
GGGGCTGTGCCTGAAGGGGTGATTTCGTCGTTCCGTCTCACCCCTGGTGC
CAGGCATAAGAAAAGCAAGCGTCGATGGTACTTCCCTTTGGTGGCCCACA
ACAATTTGAAAGTAGCAGTGGAACAACTCCGGCGACAGCTCTATCGCGAC
ACAGGAGTGATTCTCACCCTATCGCCCATCCCTGACGATGTCCTGCGCCA
ATTAAGCATTAATAAAGACGGTCATAAATTAGCTGAGAGCGACGCGCAGA
AGAGGGCCCACGACAAACTCGTCTCTCTCCTCCCGAGGCGACTTTTGGAT
GCCCTCGCGCCATTTCAAAGGGAAGGCGTGGCCTTTGTCGTCGGACGGGA
AGGCCGGGGGTTGATAGCAGATGAGATGGGGCTCGGCAAGACGATTCAAG
CCATCGCCATTGCTACTGTGTACAGGGTGGAGTGGCCGCTGCTAGTTATG
TGCCCTTCCTCTGCTCGCTTTCAATGGGAGGCCGAATTGCTCAAATGGCT
CGATCGCGACGTCCTGAAGAAGGAGGAAATCCAAGTCATGACCGCCGGCA
AGGAGAAACTGCACGATTCCGCCAAGGTTGTAATCTTGTCCTATGACCTG
GCCTTGCGCCTTAAGGAAACCCTGAGGAAACCTGTCCGTAGCGCGGGTAC
CGCAGCAGGGCATAGACAACAGGCCCGTTTTCGGGTGGTGGTGGCGGATG
AGTGCCACTATCTGAAGAACGCCGGCGCGCAACGTACCAAGGAATTGCTC
CCTTTGCTTGCAGAAGCGACGCGTGCCATCTTGTTGTCGGGTACTCCGGC
CTTGTCTCGCCCGAGGGAGTTGTGGACCCAGTTGAATGTATTGAACGGGA
GGGCTTGGAGAGACCAGTCGTCTTTCATAGATCGATACTGCACGGGGGGG
AAGGTGGGAGGGAGGACGGCGGGCGCCAAGAAGAAGTGGCAGGGCCGGGG
ACAAGGAGCTGCGAACTTGAGGGAACTGCACGAGATGCTCAAGGCGACTG
TAATGGTACGGCGGAGGAAAAAAGATATACTGAAGGGGTTGCCACCAAAG
AGGAGGATTTTCCATAAACTTGCAGTGCCGGAGCCGGCGTTGAGGGAGCA
GTTGGAAAGAGCTCTGGAGGGGCTGAGTATTGTGTCGGCAACGGCGAAGA
AAAGGGCGCGGAAAGCGGCGAGGGCGGGAGGGAGGAAGGGAGGGAAGGCG
GGGGCTGAAGAGGATCCGGACGATTTGTATTCGACCTTGGCAAGGCAGCA
CCGGGAGCGGCAGGAGCAGCAGCAGCAGCAGCAACAAGAACAAGCACAGC
AAGAACTAGCACAACAAGGGCAGGGACAACAAGGAGAGAAAGATGATAGG
GGTGGGGAGAGAACGGTGCTGGAGGCCACTGCTGCCGCTGCGCCGACTCC
TGCTCCTGCTTCGTTCAAGGCCGACGCTGCTGCTGTGACAGGGCGAGGAA
TGACAGAGGAGGAGATGGCGGAATGGTCGGCTCGTGACATCCATCAGCGG
AAGAAGATGATTCTGATGGAGGTGTTTAAGTTAACGGGCACCGCCAAAAT
CCCCCTGGCCATTGATCGGGTGAGAGAAATTTTGGCGTCGGAGTTGGGGG
GCAAAGTGTTGATTTTTGCGCACCATCGGAACGTGTTGGATGGGATTGAA
AAGGGGTGTTTGGATGGGGTGAGGCACATACGTATAGATGGCGGTACGGC
CCCGAGGGAGAGACAGGCGCAGGTGGAGCGGTTTCAGACAGATGCGGGAA
TTAGGGTAGCGTTGTTGAGCCTGACGGCGGCGGGGTTGGCACTGACGTTG
ACGGCGGCGAATCGGGCATTGTTTGTCGAGCTGTTTTGGACGCCGGCGAG
TTTGTTGCAGGCTGAGGACAGGTGTCACCGGATTGGGCAGACGAGTGAAG
TGGAGATCGAGTATCTGCTAGCGGAAGGGACGCTGGACGATGCCTTGTGG
CCACTGATAAGACGGAAGATGAGGGTGCTGGGTGAGTTGGTCGAGGGGGC
TGAAGGTCTTGACATGGAGGAAAGTTCCGTGAAGAAGGAGAAGGGTAAGA
TTAATGAAGGCTCGGAGGGGCGGAAAGGAAGCAGGGAGGAAGGCGGGATA
GAGGAAGAAAAGGAGGAGAATGAGGAGGGCCAAGTGGGACCGTTTGCATC
GTCGACTTCCTCGTCCTCGTCCTCTTCCTTGTCGACGGCAGTGGGAAATG
GGAAAGGAAAGGGGAAGAAAAGAGAAAGGGGAGGGAGAAAGCGTACTCTC
GACGATCAGGACGACGACGACTTTCTCTTGACGACCAAATCGCTGTCGTT
GTTGTCGCAGCTTGCCAAGGAGGACAGAGACCGCTGTCGGGGGGAGAGTG
AAACGGAGGATGAAAATGAAGAAGGGGAGGAGGGTGCGGATTGGGAGTCG
TCAGGAATGGAAGAGTCCTCGGAAGGTTCTGATGACGAGTACGAGGTCTA
CGAGCTGGTAGAAATTGATGATGACGATGATGAAGAAGACGTGGGAGGTG
AAAGTGGCGGCAACGGCGGTGGAAAAATGTCTTCTGTCCAGCGGCAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAAGA
GAAGAAAAAGGAGAAAGAGGAGGTGGGGGGAGAAGCACGCCCCCAAGTAA
AGCCCAATGAGGCGGCTGCGATGGAAGTCATATGCTTGTCAGACGACGAC
TAGGTGGGCATTTGAGGACGGAGAGAAGAAGCGTATGGATTGGAAATGGG
GGAGTGGGGAGTGGTCATTGTGTGTATAGAAGTGGATATTTAGAAATGTG
TCAACAAAGGAAAAATGTGACATACACGTG
back to top

protein sequence of NO03G02210.1

>NO03G02210.1-protein ID=NO03G02210.1-protein|Name=NO03G02210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1301bp
MVDVQAEAPLLEPLPVSAEVDEHLVDSLPEEGGEQCDRTQQLQQQQQPQQ
QQQQQPQGQLQQQWDEEEDNEEIDDKEEGGEHVEEELGKGQQPPQSPQQQ
QQQSIDLTLDDTEDEEEDYDQGKEEDGESTEDEAERLLPEQHKHQQQQQQ
QQQQQQQQQQQQQQQQQQQQHLGDPPSAAAPGVAYHGNYKDLQNSTQPPS
ANPIQQVYQNLAQQQSPRQGGGEGGGGGGGPVRAAMPLAAVATPNEHLRL
KHQAFLAEQEYYRQQEMKRQPSTLPRVPNISTSAFLKGSATMLRVEPSSS
FLSSSSHHHQQVGSEGGLAQLLPHSMLAGGHPSPYHPSYIQNSGGGGGGG
GGGGGGGGGGYAGATQQHFERPRYDSLSYSAGPSIQFAVSSGGEFSAKLT
GAVPEGVISSFRLTPGARHKKSKRRWYFPLVAHNNLKVAVEQLRRQLYRD
TGVILTLSPIPDDVLRQLSINKDGHKLAESDAQKRAHDKLVSLLPRRLLD
ALAPFQREGVAFVVGREGRGLIADEMGLGKTIQAIAIATVYRVEWPLLVM
CPSSARFQWEAELLKWLDRDVLKKEEIQVMTAGKEKLHDSAKVVILSYDL
ALRLKETLRKPVRSAGTAAGHRQQARFRVVVADECHYLKNAGAQRTKELL
PLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWRDQSSFIDRYCTGG
KVGGRTAGAKKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILKGLPPK
RRIFHKLAVPEPALREQLERALEGLSIVSATAKKRARKAARAGGRKGGKA
GAEEDPDDLYSTLARQHRERQEQQQQQQQEQAQQELAQQGQGQQGEKDDR
GGERTVLEATAAAAPTPAPASFKADAAAVTGRGMTEEEMAEWSARDIHQR
KKMILMEVFKLTGTAKIPLAIDRVREILASELGGKVLIFAHHRNVLDGIE
KGCLDGVRHIRIDGGTAPRERQAQVERFQTDAGIRVALLSLTAAGLALTL
TAANRALFVELFWTPASLLQAEDRCHRIGQTSEVEIEYLLAEGTLDDALW
PLIRRKMRVLGELVEGAEGLDMEESSVKKEKGKINEGSEGRKGSREEGGI
EEEKEENEEGQVGPFASSTSSSSSSSLSTAVGNGKGKGKKRERGGRKRTL
DDQDDDDFLLTTKSLSLLSQLAKEDRDRCRGESETEDENEEGEEGADWES
SGMEESSEGSDDEYEVYELVEIDDDDDEEDVGGESGGNGGGKMSSVQRQE
EEEEEEEEEEEEEEEKEKKKEKEEVGGEARPQVKPNEAAAMEVICLSDDD
*
back to top
Synonyms
Publications