NO03G02210.1, NO03G02210.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO03G02210.1
Unique Name	NO03G02210.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4030
Alignment location	chr3:652371..656400 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr3	genome	chr3:652371..656400 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO03G02210.1 vs.
Match: EWM29676.1 (zinc finger ran-binding domain-containing protein 3 [Nannochloropsis gaditana])

HSP 1 Score: 939.5 bits (2427), Expect = 1.100e-269
Identity = 660/1236 (53.40%), Postives = 786/1236 (63.59%), Query Frame = 0

Query:   81 EHVEEELGKGQQPPQSPQQQQQQSIDLTLDDTEDEEEDYDQGKEEDGESTEDEAERLLPEQHKHQQQQQQQQQQQQQQQQQQQQQQQQQQHLGDPPSAAAPGVAYHGNYKDLQ-NSTQPPSANPIQQVYQNLAQQQSP--RQGG----------GEGGGGGGGPVRAAMPLAAVATPNEHLRLKHQAFLAEQEYYRQQEMKRQPSTLPRVPNISTSAFLKGSATMLRVEPSSSFLSSSSHHHQQVGSEGGLAQLLPHSMLAGGHPSPYHPSYIQNSGGGGGGGGGGGGGGGGGYAGATQQHFERPRYDSLSYSAGPSIQFAVSSGGEFSAKLTGAVPEGVISSFRLTPGARHKKSKRRWYFPLVAHNNLKVAVEQLRRQLYRDTGVILTLSPIPDDVLRQLSINKDGHKLAESDAQKRAHDKLVSLLPRRLLDALAPFQREGVAFVVGREGRGLIADEMGLGKTIQAIAIATVYRVEWPLLVMCPSSARFQWEAELLKWLDRDVLKKEEIQVMTAGKEKLHDSAKVVILSYDLALRLKETLRKPVRSAGTAAGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWRDQSSFIDRYCTGGKVGGRTAGAKKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILKGLPPKRRIFHKLAVPEPALREQLERALEGLSIVSATAKKRARKAARAGGRKGGKAGAEEDPDDLYSTLARQHRERQEQQQQQQQEQAQQELAQQGQGQQGEKDDRGGERTVLEATAAAAPTPAPASFKADAAAVTGRGMTEEEMAEWSARDIHQRKKMILMEVFKLTGTAKIPLAIDRVREILASELGGKVLIFAHHRNVLDGIEKGCLDGVRHIRIDGGTAPRERQAQVERFQTDAGIRVALLSLTAAGLALTLTAANRALFVELFWTPASLLQAEDRCHRIGQTSEVEIEYLLAEGTLDDALWPLIRRKMRVLGELVEGAEGLDMEESSVKKEKGKINEGSEGRKGSREEGGIEEEKEENEEGQVGPFASSTSSSSSSSLSTAVGNGKGKGKKRERGGRKRTLDDQDDDDFLLTTKSLSLLSQLAKEDRDRCRGESETEDENEEGEEGADWESSGMEESSEGSDDEYEVYELVEIDDDDDEEDVGGESGGNGGGKMSSVQRQEEEEEEEE----EEEEEEEEKEKKKEKEEVGGEARPQVKPNEAAAMEVICLSDD 1300
            EH ++     +Q     Q+ +  +IDLTL+D+ED  +    G   D E TE+       E+H    + QQQQ QQ +                  PSA  P       Y D+Q N +Q    + IQQ      Q+ +   RQGG          G  G  G G     MPLA  ATPNEHLRL+HQAFLAEQE+YRQQE  R+     R P + +   L G    +RV+P                   G  QL       GG+P PY+P+Y+Q+ G G  GG                   ERP Y S++    PSI FAVSSGGEF+A+LTG VP  V+S+FRLTPGARHKKSKRRWYFPL AHNNL VAV+QLRRQ YR+TGV+L LSPIP+DVLRQLSI  DG +LAES++QK+AHDKL  LLPRRLL+ALAPFQREGV+FVV REGRGLIADEMGLGKTIQAIA+A VY+ EWPLLVMCPSSAR+ WEAELLKWLDRDVLKKEEIQV+ AG+E+LH+++KVVILSY LALRLKE LR PVRSAG A GHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAW D SSFI RYCTGG+ G +T+G  KKWQGRGQGAANLRELHEMLKATVMVRRRKKDIL GLPPKRR FHKL VPE A+R +LE ALE LSIVSATAKKRARK +R     GG     E+ +DLY+TLARQ   R+EQ+ ++    A     ++G+G  G     G  R  +EA+        P S  A              M +WSAR+I QRKK++LMEVF+LTGTAKIPLA+DRV+ +LASEL GK L+FAHH NV++GIE GCL  V HIRIDG T P ERQA+V+ FQTD G+RVALLSLTAAGLALTLTAA+R LF ELFWTP +LLQAEDRCHRIGQTSEVE+EYLLA GTLDDALWPLIRRKMRVLGELVEGAEGLD+E     +E+G       G K   EEGG EE                       S+  A   G+ KG+  E    K+        +     + L       +E  ++   E+E ++E+ +G    D ++     +      E ++ E  E      E     E  G    K  S+ R+  +E+ +      + EEE++++      E  G     V  +E    E++ + DD
Sbjct:   43 EHEKQNSRGQEQTAPHVQRHEDLAIDLTLNDSEDGGD----GSSCDFERTENG------ERHVGAPRSQQQQAQQPRSTA---------------PSAHGPNAG--SGYDDVQLNFSQYGQPDCIQQTQFTPTQELAGHGRQGGRQQDEQAGALGSRGRDGAGASIIPMPLAMAATPNEHLRLRHQAFLAEQEFYRQQEFYRRGRPWNRAPEVPSVPTLPGH---MRVQPPLGL---------------GSVQL-------GGYPLPYYPAYVQSRGMGVTGGVASSASADKYGVMGRIGTIERPSYVSVA----PSIHFAVSSGGEFAARLTGPVPGSVLSTFRLTPGARHKKSKRRWYFPLTAHNNLCVAVDQLRRQHYRETGVVLALSPIPNDVLRQLSIQTDGERLAESESQKQAHDKLGKLLPRRLLEALAPFQREGVSFVVDREGRGLIADEMGLGKTIQAIAVACVYKAEWPLLVMCPSSARYHWEAELLKWLDRDVLKKEEIQVVKAGRERLHETSKVVILSYSLALRLKEVLRAPVRSAGVAVGHRQQARFRVVVADECHYLKNAGAQRTKELLPLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWSDMSSFIRRYCTGGR-GRKTSGPGKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILTGLPPKRRTFHKLTVPEQAIRGKLEGALEALSIVSATAKKRARKRSRRQAEGGG-----EESEDLYATLARQ---RREQRARESGTGAVPPGGEEGKGVAG----AGANRQSVEASQGEGEMGEPGSGVA--------------MEDWSAREIQQRKKVLLMEVFRLTGTAKIPLAVDRVKALLASELSGKFLVFAHHMNVMNGIEDGCLRDVPHIRIDGSTPPPERQARVDTFQTDTGVRVALLSLTAAGLALTLTAASRVLFAELFWTPGALLQAEDRCHRIGQTSEVEVEYLLARGTLDDALWPLIRRKMRVLGELVEGAEGLDLE----AREEGGTGGAKGGGKVKEEEGGREE----------------------VSVGGAKKTGEKKGEMEEDDWEKKK-------EIRGAWEGLE-----GEEAEEKAEEEAEGKEESGKGSWRVDKKTGNAAMAKLLISTEGKMREAKE------ERLESAEDSGPLSDKSESILRELAQEDRDRWKGGSDTEEEDDEDADDADWESSGLDDSSVGSSEEGVCELVTIDDD 1151

The following BLAST results are available for this feature:

BLAST of NO03G02210.1 vs.

BLAST of NO03G02210.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM29676.1	1.100e-269	53.40	zinc finger ran-binding domain-containing protein ...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO03G02210	NO03G02210	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO03G02210.1	NO03G02210.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO03G02210.1.cds1	NO03G02210.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr3:652371..656400+
coding sequence from alignment at chr3:652371..656400+

mRNA sequence

>NO03G02210.1 ID=NO03G02210.1|Name=NO03G02210.1|organism=Nannochloropsis oceanica|type=mRNA|length=4030bp
ATGGTCGACGTCCAAGCTGAAGCACCACTGCTAGAACCGCTACCTGTTTC
TGCTGAAGTAGATGAACATTTAGTGGATTCGCTTCCGGAAGAGGGCGGGG
AGCAATGTGATCGGACGCAGCAGCTGCAGCAACAGCAACAGCCACAGCAG
CAGCAACAGCAGCAGCCTCAGGGACAGCTACAGCAGCAGTGGGACGAGGA
GGAGGATAACGAGGAGATAGATGACAAGGAGGAAGGTGGAGAGCACGTGG
AGGAAGAGTTGGGGAAGGGCCAGCAGCCCCCGCAGTCCCCGCAGCAGCAG
CAGCAGCAGTCGATCGACCTAACTCTGGATGATACCGAGGATGAGGAGGA
GGACTATGACCAGGGGAAGGAGGAGGACGGAGAGAGTACGGAGGACGAAG
CAGAGAGACTCCTTCCGGAGCAGCACAAACACCAACAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAACAACAACAGCAGCAACAGCAGCAACA
GCAGCAGCAGCACCTAGGTGATCCTCCCTCGGCTGCTGCACCTGGTGTTG
CTTACCACGGAAATTATAAGGACCTCCAGAATTCGACACAGCCTCCATCA
GCTAACCCCATCCAGCAGGTGTATCAGAACTTGGCTCAGCAGCAAAGTCC
ACGCCAAGGAGGGGGAGAAGGGGGAGGAGGGGGAGGAGGTCCGGTGCGAG
CAGCCATGCCATTGGCAGCAGTCGCCACGCCCAACGAACACCTCCGCCTC
AAGCACCAAGCTTTTTTAGCGGAGCAAGAGTACTACCGCCAGCAAGAAAT
GAAGCGTCAACCCAGCACCTTGCCGCGAGTGCCCAACATCTCAACATCTG
CCTTTCTGAAAGGTTCGGCTACCATGTTGCGAGTGGAACCATCCTCCTCC
TTTTTATCGTCATCATCGCACCACCATCAGCAGGTCGGGAGCGAAGGGGG
GCTTGCGCAGTTGCTACCCCACTCCATGCTGGCAGGAGGACACCCAAGTC
CTTACCACCCGAGTTATATCCAAAACAGTGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGATATGCAGGCGCGACGCAGCA
GCATTTTGAGAGACCTCGTTATGATAGTCTGTCGTATTCTGCGGGGCCCA
GCATTCAATTTGCTGTTTCTTCGGGCGGTGAATTTAGCGCAAAGCTCACA
GGGGCTGTGCCTGAAGGGGTGATTTCGTCGTTCCGTCTCACCCCTGGTGC
CAGGCATAAGAAAAGCAAGCGTCGATGGTACTTCCCTTTGGTGGCCCACA
ACAATTTGAAAGTAGCAGTGGAACAACTCCGGCGACAGCTCTATCGCGAC
ACAGGAGTGATTCTCACCCTATCGCCCATCCCTGACGATGTCCTGCGCCA
ATTAAGCATTAATAAAGACGGTCATAAATTAGCTGAGAGCGACGCGCAGA
AGAGGGCCCACGACAAACTCGTCTCTCTCCTCCCGAGGCGACTTTTGGAT
GCCCTCGCGCCATTTCAAAGGGAAGGCGTGGCCTTTGTCGTCGGACGGGA
AGGCCGGGGGTTGATAGCAGATGAGATGGGGCTCGGCAAGACGATTCAAG
CCATCGCCATTGCTACTGTGTACAGGGTGGAGTGGCCGCTGCTAGTTATG
TGCCCTTCCTCTGCTCGCTTTCAATGGGAGGCCGAATTGCTCAAATGGCT
CGATCGCGACGTCCTGAAGAAGGAGGAAATCCAAGTCATGACCGCCGGCA
AGGAGAAACTGCACGATTCCGCCAAGGTTGTAATCTTGTCCTATGACCTG
GCCTTGCGCCTTAAGGAAACCCTGAGGAAACCTGTCCGTAGCGCGGGTAC
CGCAGCAGGGCATAGACAACAGGCCCGTTTTCGGGTGGTGGTGGCGGATG
AGTGCCACTATCTGAAGAACGCCGGCGCGCAACGTACCAAGGAATTGCTC
CCTTTGCTTGCAGAAGCGACGCGTGCCATCTTGTTGTCGGGTACTCCGGC
CTTGTCTCGCCCGAGGGAGTTGTGGACCCAGTTGAATGTATTGAACGGGA
GGGCTTGGAGAGACCAGTCGTCTTTCATAGATCGATACTGCACGGGGGGG
AAGGTGGGAGGGAGGACGGCGGGCGCCAAGAAGAAGTGGCAGGGCCGGGG
ACAAGGAGCTGCGAACTTGAGGGAACTGCACGAGATGCTCAAGGCGACTG
TAATGGTACGGCGGAGGAAAAAAGATATACTGAAGGGGTTGCCACCAAAG
AGGAGGATTTTCCATAAACTTGCAGTGCCGGAGCCGGCGTTGAGGGAGCA
GTTGGAAAGAGCTCTGGAGGGGCTGAGTATTGTGTCGGCAACGGCGAAGA
AAAGGGCGCGGAAAGCGGCGAGGGCGGGAGGGAGGAAGGGAGGGAAGGCG
GGGGCTGAAGAGGATCCGGACGATTTGTATTCGACCTTGGCAAGGCAGCA
CCGGGAGCGGCAGGAGCAGCAGCAGCAGCAGCAACAAGAACAAGCACAGC
AAGAACTAGCACAACAAGGGCAGGGACAACAAGGAGAGAAAGATGATAGG
GGTGGGGAGAGAACGGTGCTGGAGGCCACTGCTGCCGCTGCGCCGACTCC
TGCTCCTGCTTCGTTCAAGGCCGACGCTGCTGCTGTGACAGGGCGAGGAA
TGACAGAGGAGGAGATGGCGGAATGGTCGGCTCGTGACATCCATCAGCGG
AAGAAGATGATTCTGATGGAGGTGTTTAAGTTAACGGGCACCGCCAAAAT
CCCCCTGGCCATTGATCGGGTGAGAGAAATTTTGGCGTCGGAGTTGGGGG
GCAAAGTGTTGATTTTTGCGCACCATCGGAACGTGTTGGATGGGATTGAA
AAGGGGTGTTTGGATGGGGTGAGGCACATACGTATAGATGGCGGTACGGC
CCCGAGGGAGAGACAGGCGCAGGTGGAGCGGTTTCAGACAGATGCGGGAA
TTAGGGTAGCGTTGTTGAGCCTGACGGCGGCGGGGTTGGCACTGACGTTG
ACGGCGGCGAATCGGGCATTGTTTGTCGAGCTGTTTTGGACGCCGGCGAG
TTTGTTGCAGGCTGAGGACAGGTGTCACCGGATTGGGCAGACGAGTGAAG
TGGAGATCGAGTATCTGCTAGCGGAAGGGACGCTGGACGATGCCTTGTGG
CCACTGATAAGACGGAAGATGAGGGTGCTGGGTGAGTTGGTCGAGGGGGC
TGAAGGTCTTGACATGGAGGAAAGTTCCGTGAAGAAGGAGAAGGGTAAGA
TTAATGAAGGCTCGGAGGGGCGGAAAGGAAGCAGGGAGGAAGGCGGGATA
GAGGAAGAAAAGGAGGAGAATGAGGAGGGCCAAGTGGGACCGTTTGCATC
GTCGACTTCCTCGTCCTCGTCCTCTTCCTTGTCGACGGCAGTGGGAAATG
GGAAAGGAAAGGGGAAGAAAAGAGAAAGGGGAGGGAGAAAGCGTACTCTC
GACGATCAGGACGACGACGACTTTCTCTTGACGACCAAATCGCTGTCGTT
GTTGTCGCAGCTTGCCAAGGAGGACAGAGACCGCTGTCGGGGGGAGAGTG
AAACGGAGGATGAAAATGAAGAAGGGGAGGAGGGTGCGGATTGGGAGTCG
TCAGGAATGGAAGAGTCCTCGGAAGGTTCTGATGACGAGTACGAGGTCTA
CGAGCTGGTAGAAATTGATGATGACGATGATGAAGAAGACGTGGGAGGTG
AAAGTGGCGGCAACGGCGGTGGAAAAATGTCTTCTGTCCAGCGGCAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAAGA
GAAGAAAAAGGAGAAAGAGGAGGTGGGGGGAGAAGCACGCCCCCAAGTAA
AGCCCAATGAGGCGGCTGCGATGGAAGTCATATGCTTGTCAGACGACGAC
TAGGTGGGCATTTGAGGACGGAGAGAAGAAGCGTATGGATTGGAAATGGG
GGAGTGGGGAGTGGTCATTGTGTGTATAGAAGTGGATATTTAGAAATGTG
TCAACAAAGGAAAAATGTGACATACACGTG

protein sequence of NO03G02210.1

>NO03G02210.1-protein ID=NO03G02210.1-protein|Name=NO03G02210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1301bp
MVDVQAEAPLLEPLPVSAEVDEHLVDSLPEEGGEQCDRTQQLQQQQQPQQ
QQQQQPQGQLQQQWDEEEDNEEIDDKEEGGEHVEEELGKGQQPPQSPQQQ
QQQSIDLTLDDTEDEEEDYDQGKEEDGESTEDEAERLLPEQHKHQQQQQQ
QQQQQQQQQQQQQQQQQQQQHLGDPPSAAAPGVAYHGNYKDLQNSTQPPS
ANPIQQVYQNLAQQQSPRQGGGEGGGGGGGPVRAAMPLAAVATPNEHLRL
KHQAFLAEQEYYRQQEMKRQPSTLPRVPNISTSAFLKGSATMLRVEPSSS
FLSSSSHHHQQVGSEGGLAQLLPHSMLAGGHPSPYHPSYIQNSGGGGGGG
GGGGGGGGGGYAGATQQHFERPRYDSLSYSAGPSIQFAVSSGGEFSAKLT
GAVPEGVISSFRLTPGARHKKSKRRWYFPLVAHNNLKVAVEQLRRQLYRD
TGVILTLSPIPDDVLRQLSINKDGHKLAESDAQKRAHDKLVSLLPRRLLD
ALAPFQREGVAFVVGREGRGLIADEMGLGKTIQAIAIATVYRVEWPLLVM
CPSSARFQWEAELLKWLDRDVLKKEEIQVMTAGKEKLHDSAKVVILSYDL
ALRLKETLRKPVRSAGTAAGHRQQARFRVVVADECHYLKNAGAQRTKELL
PLLAEATRAILLSGTPALSRPRELWTQLNVLNGRAWRDQSSFIDRYCTGG
KVGGRTAGAKKKWQGRGQGAANLRELHEMLKATVMVRRRKKDILKGLPPK
RRIFHKLAVPEPALREQLERALEGLSIVSATAKKRARKAARAGGRKGGKA
GAEEDPDDLYSTLARQHRERQEQQQQQQQEQAQQELAQQGQGQQGEKDDR
GGERTVLEATAAAAPTPAPASFKADAAAVTGRGMTEEEMAEWSARDIHQR
KKMILMEVFKLTGTAKIPLAIDRVREILASELGGKVLIFAHHRNVLDGIE
KGCLDGVRHIRIDGGTAPRERQAQVERFQTDAGIRVALLSLTAAGLALTL
TAANRALFVELFWTPASLLQAEDRCHRIGQTSEVEIEYLLAEGTLDDALW
PLIRRKMRVLGELVEGAEGLDMEESSVKKEKGKINEGSEGRKGSREEGGI
EEEKEENEEGQVGPFASSTSSSSSSSLSTAVGNGKGKGKKRERGGRKRTL
DDQDDDDFLLTTKSLSLLSQLAKEDRDRCRGESETEDENEEGEEGADWES
SGMEESSEGSDDEYEVYELVEIDDDDDEEDVGGESGGNGGGKMSSVQRQE
EEEEEEEEEEEEEEEKEKKKEKEEVGGEARPQVKPNEAAAMEVICLSDDD
*

mRNA from alignment at chr3:652371..656400+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO03G02210.1 ID=NO03G02210.1|Name=NO03G02210.1|organism=Nannochloropsis oceanica|type=mRNA|length=4030bp|location=Sequence derived from alignment at chr3:652371..656400+ (Nannochloropsis oceanica)
ATGGTCGACGTCCAAGCTGAAGCACCACTGCTAGAACCGCTACCTGTTTC
TGCTGAAGTAGATGAACATTTAGTGGATTCGCTTCCGGAAGAGGGCGGGG
AGCAATGTGATCGGACGCAGCAGCTGCAGCAACAGCAACAGCCACAGCAG
CAGCAACAGCAGCAGCCTCAGGGACAGCTACAGCAGCAGTGGGACGAGGA
GGAGGATAACGAGGAGATAGATGACAAGGAGGAAGGTGGAGAGCACGTGG
AGGAAGAGTTGGGGAAGGGCCAGCAGCCCCCGCAGTCCCCGCAGCAGCAG
CAGCAGCAGTCGATCGACCTAACTCTGGATGATACCGAGGATGAGGAGGA
GGACTATGACCAGGGGAAGGAGGAGGACGGAGAGAGTACGGAGGACGAAG
CAGAGAGACTCCTTCCGGAGCAGCACAAACACCAACAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAACAACAACAGCAGCAACAGCAGCAACA
GCAGCAGCAGCACCTAGGTGATCCTCCCTCGGCTGCTGCACCTGGTGTTG
CTTACCACGGAAATTATAAGGACCTCCAGAATTCGACACAGCCTCCATCA
GCTAACCCCATCCAGCAGGTGTATCAGAACTTGGCTCAGCAGCAAAGTCC
ACGCCAAGGAGGGGGAGAAGGGGGAGGAGGGGGAGGAGGTCCGGTGCGAG
CAGCCATGCCATTGGCAGCAGTCGCCACGCCCAACGAACACCTCCGCCTC
AAGCACCAAGCTTTTTTAGCGGAGCAAGAGTACTACCGCCAGCAAGAAAT
GAAGCGTCAACCCAGCACCTTGCCGCGAGTGCCCAACATCTCAACATCTG
CCTTTCTGAAAGGTTCGGCTACCATGTTGCGAGTGGAACCATCCTCCTCC
TTTTTATCGTCATCATCGCACCACCATCAGCAGGTCGGGAGCGAAGGGGG
GCTTGCGCAGTTGCTACCCCACTCCATGCTGGCAGGAGGACACCCAAGTC
CTTACCACCCGAGTTATATCCAAAACAGTGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGATATGCAGGCGCGACGCAGCA
GCATTTTGAGAGACCTCGTTATGATAGTCTGTCGTATTCTGCGGGGCCCA
GCATTCAATTTGCTGTTTCTTCGGGCGGTGAATTTAGCGCAAAGCTCACA
GGGGCTGTGCCTGAAGGGGTGATTTCGTCGTTCCGTCTCACCCCTGGTGC
CAGGCATAAGAAAAGCAAGCGTCGATGGTACTTCCCTTTGGTGGCCCACA
ACAATTTGAAAGTAGCAGTGGAACAACTCCGGCGACAGCTCTATCGCGAC
ACAGGAGTGATTCTCACCCTATCGCCCATCCCTGACGATGTCCTGCGCCA
ATTAAGCATTAATAAAGACGGTCATAAATTAGCTGAGAGCGACGCGCAGA
AGAGGGCCCACGACAAACTCGTCTCTCTCCTCCCGAGGCGACTTTTGGAT
GCCCTCGCGCCATTTCAAAGGGAAGGCGTGGCCTTTGTCGTCGGACGGGA
AGGCCGGGGGTTGATAGCAGATGAGATGGGGCTCGGCAAGACGATTCAAG
CCATCGCCATTGCTACTGTGTACAGGGTGGAGTGGCCGCTGCTAGTTATG
TGCCCTTCCTCTGCTCGCTTTCAATGGGAGGCCGAATTGCTCAAATGGCT
CGATCGCGACGTCCTGAAGAAGGAGGAAATCCAAGTCATGACCGCCGGCA
AGGAGAAACTGCACGATTCCGCCAAGGTTGTAATCTTGTCCTATGACCTG
GCCTTGCGCCTTAAGGAAACCCTGAGGAAACCTGTCCGTAGCGCGGGTAC
CGCAGCAGGGCATAGACAACAGGCCCGTTTTCGGGTGGTGGTGGCGGATG
AGTGCCACTATCTGAAGAACGCCGGCGCGCAACGTACCAAGGAATTGCTC
CCTTTGCTTGCAGAAGCGACGCGTGCCATCTTGTTGTCGGGTACTCCGGC
CTTGTCTCGCCCGAGGGAGTTGTGGACCCAGTTGAATGTATTGAACGGGA
GGGCTTGGAGAGACCAGTCGTCTTTCATAGATCGATACTGCACGGGGGGG
AAGGTGGGAGGGAGGACGGCGGGCGCCAAGAAGAAGTGGCAGGGCCGGGG
ACAAGGAGCTGCGAACTTGAGGGAACTGCACGAGATGCTCAAGGCGACTG
TAATGGTACGGCGGAGGAAAAAAGATATACTGAAGGGGTTGCCACCAAAG
AGGAGGATTTTCCATAAACTTGCAGTGCCGGAGCCGGCGTTGAGGGAGCA
GTTGGAAAGAGCTCTGGAGGGGCTGAGTATTGTGTCGGCAACGGCGAAGA
AAAGGGCGCGGAAAGCGGCGAGGGCGGGAGGGAGGAAGGGAGGGAAGGCG
GGGGCTGAAGAGGATCCGGACGATTTGTATTCGACCTTGGCAAGGCAGCA
CCGGGAGCGGCAGGAGCAGCAGCAGCAGCAGCAACAAGAACAAGCACAGC
AAGAACTAGCACAACAAGGGCAGGGACAACAAGGAGAGAAAGATGATAGG
GGTGGGGAGAGAACGGTGCTGGAGGCCACTGCTGCCGCTGCGCCGACTCC
TGCTCCTGCTTCGTTCAAGGCCGACGCTGCTGCTGTGACAGGGCGAGGAA
TGACAGAGGAGGAGATGGCGGAATGGTCGGCTCGTGACATCCATCAGCGG
AAGAAGATGATTCTGATGGAGGTGTTTAAGTTAACGGGCACCGCCAAAAT
CCCCCTGGCCATTGATCGGGTGAGAGAAATTTTGGCGTCGGAGTTGGGGG
GCAAAGTGTTGATTTTTGCGCACCATCGGAACGTGTTGGATGGGATTGAA
AAGGGGTGTTTGGATGGGGTGAGGCACATACGTATAGATGGCGGTACGGC
CCCGAGGGAGAGACAGGCGCAGGTGGAGCGGTTTCAGACAGATGCGGGAA
TTAGGGTAGCGTTGTTGAGCCTGACGGCGGCGGGGTTGGCACTGACGTTG
ACGGCGGCGAATCGGGCATTGTTTGTCGAGCTGTTTTGGACGCCGGCGAG
TTTGTTGCAGGCTGAGGACAGGTGTCACCGGATTGGGCAGACGAGTGAAG
TGGAGATCGAGTATCTGCTAGCGGAAGGGACGCTGGACGATGCCTTGTGG
CCACTGATAAGACGGAAGATGAGGGTGCTGGGTGAGTTGGTCGAGGGGGC
TGAAGGTCTTGACATGGAGGAAAGTTCCGTGAAGAAGGAGAAGGGTAAGA
TTAATGAAGGCTCGGAGGGGCGGAAAGGAAGCAGGGAGGAAGGCGGGATA
GAGGAAGAAAAGGAGGAGAATGAGGAGGGCCAAGTGGGACCGTTTGCATC
GTCGACTTCCTCGTCCTCGTCCTCTTCCTTGTCGACGGCAGTGGGAAATG
GGAAAGGAAAGGGGAAGAAAAGAGAAAGGGGAGGGAGAAAGCGTACTCTC
GACGATCAGGACGACGACGACTTTCTCTTGACGACCAAATCGCTGTCGTT
GTTGTCGCAGCTTGCCAAGGAGGACAGAGACCGCTGTCGGGGGGAGAGTG
AAACGGAGGATGAAAATGAAGAAGGGGAGGAGGGTGCGGATTGGGAGTCG
TCAGGAATGGAAGAGTCCTCGGAAGGTTCTGATGACGAGTACGAGGTCTA
CGAGCTGGTAGAAATTGATGATGACGATGATGAAGAAGACGTGGGAGGTG
AAAGTGGCGGCAACGGCGGTGGAAAAATGTCTTCTGTCCAGCGGCAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAAGA
GAAGAAAAAGGAGAAAGAGGAGGTGGGGGGAGAAGCACGCCCCCAAGTAA
AGCCCAATGAGGCGGCTGCGATGGAAGTCATATGCTTGTCAGACGACGAC
TAGGTGGGCATTTGAGGACGGAGAGAAGAAGCGTATGGATTGGAAATGGG
GGAGTGGGGAGTGGTCATTGTGTGTATAGAAGTGGATATTTAGAAATGTG
TCAACAAAGGAAAAATGTGACATACACGTG

Coding sequence (CDS) from alignment at chr3:652371..656400+

>NO03G02210.1 ID=NO03G02210.1|Name=NO03G02210.1|organism=Nannochloropsis oceanica|type=CDS|length=3903bp|location=Sequence derived from alignment at chr3:652371..656400+ (Nannochloropsis oceanica)
ATGGTCGACGTCCAAGCTGAAGCACCACTGCTAGAACCGCTACCTGTTTC
TGCTGAAGTAGATGAACATTTAGTGGATTCGCTTCCGGAAGAGGGCGGGG
AGCAATGTGATCGGACGCAGCAGCTGCAGCAACAGCAACAGCCACAGCAG
CAGCAACAGCAGCAGCCTCAGGGACAGCTACAGCAGCAGTGGGACGAGGA
GGAGGATAACGAGGAGATAGATGACAAGGAGGAAGGTGGAGAGCACGTGG
AGGAAGAGTTGGGGAAGGGCCAGCAGCCCCCGCAGTCCCCGCAGCAGCAG
CAGCAGCAGTCGATCGACCTAACTCTGGATGATACCGAGGATGAGGAGGA
GGACTATGACCAGGGGAAGGAGGAGGACGGAGAGAGTACGGAGGACGAAG
CAGAGAGACTCCTTCCGGAGCAGCACAAACACCAACAGCAGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAACAACAACAGCAGCAACAGCAGCAACA
GCAGCAGCAGCACCTAGGTGATCCTCCCTCGGCTGCTGCACCTGGTGTTG
CTTACCACGGAAATTATAAGGACCTCCAGAATTCGACACAGCCTCCATCA
GCTAACCCCATCCAGCAGGTGTATCAGAACTTGGCTCAGCAGCAAAGTCC
ACGCCAAGGAGGGGGAGAAGGGGGAGGAGGGGGAGGAGGTCCGGTGCGAG
CAGCCATGCCATTGGCAGCAGTCGCCACGCCCAACGAACACCTCCGCCTC
AAGCACCAAGCTTTTTTAGCGGAGCAAGAGTACTACCGCCAGCAAGAAAT
GAAGCGTCAACCCAGCACCTTGCCGCGAGTGCCCAACATCTCAACATCTG
CCTTTCTGAAAGGTTCGGCTACCATGTTGCGAGTGGAACCATCCTCCTCC
TTTTTATCGTCATCATCGCACCACCATCAGCAGGTCGGGAGCGAAGGGGG
GCTTGCGCAGTTGCTACCCCACTCCATGCTGGCAGGAGGACACCCAAGTC
CTTACCACCCGAGTTATATCCAAAACAGTGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGATATGCAGGCGCGACGCAGCA
GCATTTTGAGAGACCTCGTTATGATAGTCTGTCGTATTCTGCGGGGCCCA
GCATTCAATTTGCTGTTTCTTCGGGCGGTGAATTTAGCGCAAAGCTCACA
GGGGCTGTGCCTGAAGGGGTGATTTCGTCGTTCCGTCTCACCCCTGGTGC
CAGGCATAAGAAAAGCAAGCGTCGATGGTACTTCCCTTTGGTGGCCCACA
ACAATTTGAAAGTAGCAGTGGAACAACTCCGGCGACAGCTCTATCGCGAC
ACAGGAGTGATTCTCACCCTATCGCCCATCCCTGACGATGTCCTGCGCCA
ATTAAGCATTAATAAAGACGGTCATAAATTAGCTGAGAGCGACGCGCAGA
AGAGGGCCCACGACAAACTCGTCTCTCTCCTCCCGAGGCGACTTTTGGAT
GCCCTCGCGCCATTTCAAAGGGAAGGCGTGGCCTTTGTCGTCGGACGGGA
AGGCCGGGGGTTGATAGCAGATGAGATGGGGCTCGGCAAGACGATTCAAG
CCATCGCCATTGCTACTGTGTACAGGGTGGAGTGGCCGCTGCTAGTTATG
TGCCCTTCCTCTGCTCGCTTTCAATGGGAGGCCGAATTGCTCAAATGGCT
CGATCGCGACGTCCTGAAGAAGGAGGAAATCCAAGTCATGACCGCCGGCA
AGGAGAAACTGCACGATTCCGCCAAGGTTGTAATCTTGTCCTATGACCTG
GCCTTGCGCCTTAAGGAAACCCTGAGGAAACCTGTCCGTAGCGCGGGTAC
CGCAGCAGGGCATAGACAACAGGCCCGTTTTCGGGTGGTGGTGGCGGATG
AGTGCCACTATCTGAAGAACGCCGGCGCGCAACGTACCAAGGAATTGCTC
CCTTTGCTTGCAGAAGCGACGCGTGCCATCTTGTTGTCGGGTACTCCGGC
CTTGTCTCGCCCGAGGGAGTTGTGGACCCAGTTGAATGTATTGAACGGGA
GGGCTTGGAGAGACCAGTCGTCTTTCATAGATCGATACTGCACGGGGGGG
AAGGTGGGAGGGAGGACGGCGGGCGCCAAGAAGAAGTGGCAGGGCCGGGG
ACAAGGAGCTGCGAACTTGAGGGAACTGCACGAGATGCTCAAGGCGACTG
TAATGGTACGGCGGAGGAAAAAAGATATACTGAAGGGGTTGCCACCAAAG
AGGAGGATTTTCCATAAACTTGCAGTGCCGGAGCCGGCGTTGAGGGAGCA
GTTGGAAAGAGCTCTGGAGGGGCTGAGTATTGTGTCGGCAACGGCGAAGA
AAAGGGCGCGGAAAGCGGCGAGGGCGGGAGGGAGGAAGGGAGGGAAGGCG
GGGGCTGAAGAGGATCCGGACGATTTGTATTCGACCTTGGCAAGGCAGCA
CCGGGAGCGGCAGGAGCAGCAGCAGCAGCAGCAACAAGAACAAGCACAGC
AAGAACTAGCACAACAAGGGCAGGGACAACAAGGAGAGAAAGATGATAGG
GGTGGGGAGAGAACGGTGCTGGAGGCCACTGCTGCCGCTGCGCCGACTCC
TGCTCCTGCTTCGTTCAAGGCCGACGCTGCTGCTGTGACAGGGCGAGGAA
TGACAGAGGAGGAGATGGCGGAATGGTCGGCTCGTGACATCCATCAGCGG
AAGAAGATGATTCTGATGGAGGTGTTTAAGTTAACGGGCACCGCCAAAAT
CCCCCTGGCCATTGATCGGGTGAGAGAAATTTTGGCGTCGGAGTTGGGGG
GCAAAGTGTTGATTTTTGCGCACCATCGGAACGTGTTGGATGGGATTGAA
AAGGGGTGTTTGGATGGGGTGAGGCACATACGTATAGATGGCGGTACGGC
CCCGAGGGAGAGACAGGCGCAGGTGGAGCGGTTTCAGACAGATGCGGGAA
TTAGGGTAGCGTTGTTGAGCCTGACGGCGGCGGGGTTGGCACTGACGTTG
ACGGCGGCGAATCGGGCATTGTTTGTCGAGCTGTTTTGGACGCCGGCGAG
TTTGTTGCAGGCTGAGGACAGGTGTCACCGGATTGGGCAGACGAGTGAAG
TGGAGATCGAGTATCTGCTAGCGGAAGGGACGCTGGACGATGCCTTGTGG
CCACTGATAAGACGGAAGATGAGGGTGCTGGGTGAGTTGGTCGAGGGGGC
TGAAGGTCTTGACATGGAGGAAAGTTCCGTGAAGAAGGAGAAGGGTAAGA
TTAATGAAGGCTCGGAGGGGCGGAAAGGAAGCAGGGAGGAAGGCGGGATA
GAGGAAGAAAAGGAGGAGAATGAGGAGGGCCAAGTGGGACCGTTTGCATC
GTCGACTTCCTCGTCCTCGTCCTCTTCCTTGTCGACGGCAGTGGGAAATG
GGAAAGGAAAGGGGAAGAAAAGAGAAAGGGGAGGGAGAAAGCGTACTCTC
GACGATCAGGACGACGACGACTTTCTCTTGACGACCAAATCGCTGTCGTT
GTTGTCGCAGCTTGCCAAGGAGGACAGAGACCGCTGTCGGGGGGAGAGTG
AAACGGAGGATGAAAATGAAGAAGGGGAGGAGGGTGCGGATTGGGAGTCG
TCAGGAATGGAAGAGTCCTCGGAAGGTTCTGATGACGAGTACGAGGTCTA
CGAGCTGGTAGAAATTGATGATGACGATGATGAAGAAGACGTGGGAGGTG
AAAGTGGCGGCAACGGCGGTGGAAAAATGTCTTCTGTCCAGCGGCAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAAGA
GAAGAAAAAGGAGAAAGAGGAGGTGGGGGGAGAAGCACGCCCCCAAGTAA
AGCCCAATGAGGCGGCTGCGATGGAAGTCATATGCTTGTCAGACGACGAC
TAG

Synonyms

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