NO03G02140, NO03G02140 (gene) Nannochloropsis oceanica

Overview
NameNO03G02140
Unique NameNO03G02140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2206
Alignment locationchr3:635022..637227 -

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Properties
Property NameValue
DescriptionPhotosystem II stability/assembly factor
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:635022..637227 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006311TAT_signal
IPR028203PSII_CF48-like_dom
Homology
[Close]
BLAST of NO03G02140 vs. NCBI_GenBank
Match: EWM29690.1 (Photosystem II stability/assembly factor [Nannochloropsis gaditana])

HSP 1 Score: 573.9 bits (1478), Expect = 4.000e-160
Identity = 326/426 (76.53%), Postives = 346/426 (81.22%), Query Frame = 0 
Query:    1 MGKITSVIVACMTMLVASPASAFMPFAARPSCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAWEQVTDLPMGATLYDMDFDSKDPNHGWIVGSKGTFLETTDAGKTWVPRSFVDLDPDEEVTYRFERVSFXXXXXXXXXXXXXXXXXXXXXXXXXRIPLSPKLPGEPSTVFATGPNSAEMTTSTGAVYKTTNAGRNWKAQVKETIDATLNRISASGVQGASYFTGSIISVVRDDITGAYLAVSSRGNFFLTWVPGDDFWVPHNRGTSRRIQNMGFVKGDSSQGVWMSLNGGLLQVSEPAQDLSSSEDKFNFADSKIRSGGYGILDVCWKDDQEVWAVGGGGSMFVSKDGGKTFTFNKSADNIPGNLYKVKFFGDKGFVLGSEGILLRYKGIA 427
            M K+  ++ AC  +L  SPASAFMPFAAR S                                       XXXXX                    AWEQVT +PMGATLYD+DFDSKDP HGWIVGSKGTFLETTD G++WVPRSFVDLDPDEEVTYRFERVSFXXXXXXXXXXXXXXXXXXXXXXXXXRIPLSPKLPGEPSTVFATGPNSAEMTTSTGA+YKTTNAGRNWKAQVKETIDATLNRIS+SGV+GASYFTGSIISVVRD ++GAYLAVSSRGNFFLTW+PG DFWVPHNRGTSRRIQNMGFVKGD+S+GVWMSLNGGLLQ+ EP QDLSS E+ F FADSKIRSGGYGILDV WKD+QEVWAVGGGGSMFVSKDGGKTFTFNKSAD IPGNLYKVKFFGDKGFVLGSEG+LLRYKGIA
Sbjct:    1 MRKVNFLVAACAMVLGVSPASAFMPFAARSSSAIKMSASTGEKSSRSENMLPDSSVSRRDLVKTTSVAAAXXXXXGALGGSTQPAAAASNF----AWEQVTGIPMGATLYDVDFDSKDPEHGWIVGSKGTFLETTDGGRSWVPRSFVDLDPDEEVTYRFERVSFXXXXXXXXXXXXXXXXXXXXXXXXXRIPLSPKLPGEPSTVFATGPNSAEMTTSTGAIYKTTNAGRNWKAQVKETIDATLNRISSSGVKGASYFTGSIISVVRDQLSGAYLAVSSRGNFFLTWLPGQDFWVPHNRGTSRRIQNMGFVKGDTSKGVWMSLNGGLLQICEPNQDLSSDEE-FKFADSKIRSGGYGILDVSWKDEQEVWAVGGGGSMFVSKDGGKTFTFNKSADEIPGNLYKVKFFGDKGFVLGSEGVLLRYKGIA 421
[Close]
BLAST of NO03G02140 vs. NCBI_GenBank
Match: GAX19930.1 (hypothetical protein FisN_1Lh599 [Fistulifera solaris])

HSP 1 Score: 415.6 bits (1067), Expect = 1.800e-112
Identity = 225/333 (67.57%), Postives = 272/333 (81.68%), Query Frame = 0 
Query:   97 WEQVTDLPMGATLYDMDFDSKDPNHGWIVGSKGTFLETTDAGKTWVPRSFVDLDPDEEVTYRFERVSFXXXXXXXXXXXXXXXXXXXXXXXXXRIPLSPKLPGEPSTVFATGPNSAEMTTSTGAVYKTTNAGRNWKAQVKETIDATLNRISASGVQGASYFTGSIISVVRDDITGAYLAVSSRGNFFLTWVPGDDFWVPHNRGTSRRIQNMGFVKGDSSQGVWMSLNGGLLQVSEPAQDLSSSEDKFNFADSKIRSGGYGILDVCWKDDQEVWAVGGGGSMFVSKDGGKTFTFNKSADNIPGNLYKVKFF---GDKGFVLGSEGILLRYKGIA 427
            W++V D+P   T+YD+ FD  D NHG++VGS+G F ET D GKTW PRSF +LDP+EEVTYRF+++SF    XXXXXXXXXXXXXXXXXXXXX IPLSPKLPGEP+ + A GP+ AEMTT+TGA+Y T NAGRNWKAQVKETIDATLNRIS+SG+ GASYFTGSII+ VRDD  GAYLAVSSRGNFFLTW P DDFW+PHNRGT RRIQNMGFV+GD  +G+WM+LNGG L +SE   DL  ++D F+F ++ I++GGYGI DV W+   EVWAVGG  +M+VS DGGK F+F+KSA++IPGNLY VKFF   G+ G+ LGS G+L+R++G A
Sbjct:   77 WKRV-DIPFEDTIYDIAFD--DANHGYLVGSRGAFAETNDGGKTWEPRSFANLDPEEEVTYRFQQISFKDGEXXXXXXXXXXXXXXXXXXXXXXIPLSPKLPGEPAAIVALGPSKAEMTTTTGAIYTTDNAGRNWKAQVKETIDATLNRISSSGISGASYFTGSIINQVRDD-QGAYLAVSSRGNFFLTWEPEDDFWIPHNRGTPRRIQNMGFVEGDIQKGLWMTLNGGKLFISEGEPDL--TKDSFDFVEADIKTGGYGITDVAWRTPNEVWAVGGSNTMYVSYDGGKKFSFDKSANDIPGNLYNVKFFPEYGNTGWALGSNGLLMRFEGSA 403
[Close]
BLAST of NO03G02140 vs. NCBI_GenBank
Match: GAX28610.1 (hypothetical protein FisN_1Hh599 [Fistulifera solaris])

HSP 1 Score: 411.0 bits (1055), Expect = 4.500e-111
Identity = 223/333 (66.97%), Postives = 270/333 (81.08%), Query Frame = 0 
Query:   97 WEQVTDLPMGATLYDMDFDSKDPNHGWIVGSKGTFLETTDAGKTWVPRSFVDLDPDEEVTYRFERVSFXXXXXXXXXXXXXXXXXXXXXXXXXRIPLSPKLPGEPSTVFATGPNSAEMTTSTGAVYKTTNAGRNWKAQVKETIDATLNRISASGVQGASYFTGSIISVVRDDITGAYLAVSSRGNFFLTWVPGDDFWVPHNRGTSRRIQNMGFVKGDSSQGVWMSLNGGLLQVSEPAQDLSSSEDKFNFADSKIRSGGYGILDVCWKDDQEVWAVGGGGSMFVSKDGGKTFTFNKSADNIPGNLYKVKFF---GDKGFVLGSEGILLRYKGIA 427
            W++V D+P   T+YD+ FD  D NHG++VGS+G F ET D GKTW PRSF +LDP+EEVTYRF+++SF    XXXXXXXXXXXXXXXXXXXXX IPLSPKLPGEP+ + A GP+ AEMTT+TGA+Y T NAGRNWKAQVKETIDATLNRIS+SG+ GASYFTGSII+ VRDD  GAYLAVSSRGNFFLTW P DDFW+PHNRGT RRIQNMGFV+GD  +G+WM+LNGG L +S    DL  ++D F+F ++ I++GGYGI DV W+   EVWAVGG  +M+VS DGGK F+F+KSA++IPGNLY VKFF    + G+ LGS G+L+R++G A
Sbjct:   77 WKRV-DIPFEDTIYDIAFD--DANHGYLVGSRGAFAETNDGGKTWEPRSFANLDPEEEVTYRFQQISFKDGEXXXXXXXXXXXXXXXXXXXXXXIPLSPKLPGEPAAIVALGPSKAEMTTTTGAIYTTDNAGRNWKAQVKETIDATLNRISSSGISGASYFTGSIINQVRDD-QGAYLAVSSRGNFFLTWEPEDDFWIPHNRGTPRRIQNMGFVEGDIQKGLWMTLNGGKLFISAGEPDL--TKDSFDFVEADIKTGGYGITDVAWRTPNEVWAVGGSNTMYVSYDGGKKFSFDKSANDIPGNLYNVKFFPQYNNAGWALGSNGLLMRFEGSA 403
[Close]
BLAST of NO03G02140 vs. NCBI_GenBank
Match: OEU20569.1 (photosystem II stability/assembly factor [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 409.1 bits (1050), Expect = 1.700e-110
Identity = 225/331 (67.98%), Postives = 270/331 (81.57%), Query Frame = 0 
Query:   97 WEQVTDLPMGATLYDMDFDSKDPNHGWIVGSKGTFLETTDAGKTWVPRSFVDLDPDEEVTYRFERVSFXXXXXXXXXXXXXXXXXXXXXXXXXRIPLSPKLPGEPSTVFATGPNSAEMTTSTGAVYKTTNAGRNWKAQVKETIDATLNRISASGVQGASYFTGSIISVVRDDITGAYLAVSSRGNFFLTWVPGDDFWVPHNRGTSRRIQNMGFVKGDSSQGVWMSLNGGLLQVSEPAQDLSSSEDKFNFADSKIRSGGYGILDVCWKDDQEVWAVGGGGSMFVSKDGGKTFTFNKSADNIPGNLYKVKF---FGDKGFVLGSEGILLRYKG 425
            W+QV  LP   TLYD+DFD+  P HG++VGS+G+F ET+D G+TW  RSF +LD +EEVTYRF   SF   XXXXXXXXXXXXXXXXXXXXXXRIPLSPKLPGEP+++ + GP  AEMTTS+GA+Y T NAGRNWKAQVKETIDATLNRIS+SGV GASYFTG IIS +RDD  GA+LAVSSRGNFFLTW PGDDFW+PHNRGTSRRIQNMGFV+GD ++G WM+LNGG L +     DL +  D F+F ++ I++GG+GI DV W++  EVWAVGG  +M+VS+DGGK F+F+KSA++IPGNLY VKF   FG+KGF LGS G+LL+Y G
Sbjct:   86 WKQV-KLPFAETLYDIDFDT--PTHGYLVGSRGSFAETSDGGETWEARSFSNLDAEEEVTYRFTVSSFTDGXXXXXXXXXXXXXXXXXXXXXXRIPLSPKLPGEPTSITSLGPGKAEMTTSSGAIYYTENAGRNWKAQVKETIDATLNRISSSGVSGASYFTGQIISQIRDD-DGAWLAVSSRGNFFLTWEPGDDFWIPHNRGTSRRIQNMGFVEGDLNKGAWMTLNGGKLLICYTEPDLKA--DTFDFKEANIKTGGFGITDVAWRNKSEVWAVGGSNTMYVSQDGGKNFSFDKSANDIPGNLYNVKFFKEFGNKGFALGSNGLLLKYVG 410
[Close]
BLAST of NO03G02140 vs. NCBI_GenBank
Match: XP_002295048.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED87828.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 407.5 bits (1046), Expect = 5.000e-110
Identity = 227/332 (68.37%), Postives = 266/332 (80.12%), Query Frame = 0 
Query:   97 WEQVTDLPMGATLYDMDFDSKDPNHGWIVGSKGTFLETTDAGKTWVPRSFVDLDPDEEVTYRFERVSFXXXXXXXXXXXXXXXXXXXXXXXXXRIPLSPKLPGEPSTVFATGPNSAEMTTSTGAVYKTTNAGRNWKAQVKETIDATLNRISASGVQGASYFTGSIISVVRDDITGAYLAVSSRGNFFLTWVPGDDFWVPHNRGTSRRIQNMGFVKGDSSQGVWMSLNGG-LLQVSEPAQDLSSSEDKFNFADSKIRSGGYGILDVCWKDDQEVWAVGGGGSMFVSKDGGKTFTFNKSADNIPGNLYKVKF---FGDKGFVLGSEGILLRYKG 425
            W QV  +P   T+YD+DFDS  P HG+IVG++G+F ET D G TW PRSF +LD +EE+TYRF+ VSF    XXXXXXXXXXXXXXXXXXXXXRIPLSPKLPGEP+ + ATGPNSAEM TS+GAVY T NAGRNWKAQVKETIDATLNRIS+SGV GASYFTGSI++  RD   GAY+AVSSRGNFFLTW PG DFW+PHNRGT RRIQNMGFV+GD   G+WM+LNGG LL  S  + DLSS E  F F ++ I++GGYG+ DV W+DD EVWAVGG  +M+VSKD G+ F F+KSA++IPGNLY VKF   FG+ G+ LGS G+LL+Y G
Sbjct:   78 WRQV-KVPFEDTVYDIDFDS--PTHGYIVGARGSFAETNDGGATWEPRSFSNLDAEEEITYRFQVVSFNNGEXXXXXXXXXXXXXXXXXXXXXRIPLSPKLPGEPTGILATGPNSAEMITSSGAVYTTENAGRNWKAQVKETIDATLNRISSSGVSGASYFTGSIVNEQRDS-KGAYIAVSSRGNFFLTWEPGQDFWIPHNRGTPRRIQNMGFVRGDIKNGLWMTLNGGKLLVSSSDSVDLSSEE--FPFDEANIKTGGYGLTDVAWRDDNEVWAVGGSNTMYVSKDNGRNFVFDKSANDIPGNLYNVKFFREFGNAGWALGSNGLLLKYVG 403
[Close]
BLAST of NO03G02140 vs. NCBI_GenBank
Match: XP_002181754.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC46968.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 394.4 bits (1012), Expect = 4.400e-106
Identity = 220/331 (66.47%), Postives = 261/331 (78.85%), Query Frame = 0 
Query:   97 WEQVTDLPMGATLYDMDFDSKDPNHGWIVGSKGTFLETTDAGKTWVPRSFVDLDPDEEVTYRFERVSFXXXXXXXXXXXXXXXXXXXXXXXXXRIPLSPKLPGEPSTVFATGPNSAEMTTSTGAVYKTTNAGRNWKAQVKETIDATLNRISASGVQGASYFTGSIISVVRDDITGAYLAVSSRGNFFLTWVPGDDFWVPHNRGTSRRIQNMGFVKGDSSQGVWMSLNGGLLQVSEPAQDLSSSEDKFNFADSKIRSGGYGILDVCWKDDQEVWAVGGGGSMFVSKDGGKTFTFNKSADNIPGNLYKVKFF---GDKGFVLGSEGILLRYKG 425
            W +V  LP   TL+D+DFDS  P HG++VG++G F ET D GKTW  RSF +LDP+EEVTYRF+ +SF    XXXXXXXXXXXXXXXXXXXXX     PKLPGEP+ + A GP+ AEMTTS+GAVY T NAGRNWKAQVKETIDATLNRIS+SGV GASYFTGSII+ VRDD+ GAYLAVSSRGNFFLTW PG DFW+PHNRGT RRIQNMGFV+GD  +G+WM+LNGG L +S    DL  ++D F+F ++ I++GGYGI DV W++ +EVWAVGG  +M+VS DGGK F F+KS +  PGNLY VKFF   G+ G+ LGS G+LLRY G
Sbjct:   84 WSKV-PLPFEDTLFDIDFDS--PTHGYLVGARGAFAETNDGGKTWEARSFSNLDPEEEVTYRFQVLSFKDGEXXXXXXXXXXXXXXXXXXXXXXXXXXPKLPGEPTAIVALGPSRAEMTTSSGAVYVTDNAGRNWKAQVKETIDATLNRISSSGVSGASYFTGSIINQVRDDL-GAYLAVSSRGNFFLTWEPGQDFWIPHNRGTPRRIQNMGFVEGDIKKGLWMTLNGGKLFISSEEPDL--TKDVFDFQEADIKTGGYGITDVAWRNPKEVWAVGGSNTMYVSFDGGKKFQFDKSGNAYPGNLYNVKFFPQYGNAGWALGSNGLLLRYTG 408
[Close]
BLAST of NO03G02140 vs. NCBI_GenBank
Match: XP_009038771.1 (hypothetical protein AURANDRAFT_29089 [Aureococcus anophagefferens] >EGB06598.1 hypothetical protein AURANDRAFT_29089 [Aureococcus anophagefferens])

HSP 1 Score: 394.0 bits (1011), Expect = 5.700e-106
Identity = 220/327 (67.28%), Postives = 266/327 (81.35%), Query Frame = 0 
Query:   97 WEQVTDLPMGATLYDMDFDSKDPNHGWIVGSKGTFLETTDAGKTWVPRSFVDLDPDEEVTYRFERVSFXXXXXXXXXXXXXXXXXXXXXXXXXRIPLSPKLPGEPSTVFATGPNSAEMTTSTGAVYKTTNAGRNWKAQVKETIDATLNRISASGVQGASYFTGSIISVVRDDITGAYLAVSSRGNFFLTWVPGDDFWVPHNRGTSRRIQNMGFVKGDSSQGVWMSLNGGLLQVSEPAQDLSSSEDKFNFADSKIRSGGYGILDVCWKDDQEVWAVGGGGSMFVSKDGGKTFTFNKSADNIPGNLYKVKFFG-DKGFVLGSEGILLRY 423
            WE+V+ LP+  TL+D+ FD+    HG++VG+KGTFLET D GK W PR+F +LD +EEV YRFE+VSFXXXXXXXXXXXXXXXXXXXXXXXXXRIPLSPKLPGEP+ V A G + AEMTTSTGA+Y TTNAGRNWKAQVKETIDATLNR+S+SGV GASYFTGS+ ++ R+   G YLAVSSRGNF+LTW PG DFW+PHNRGT RRIQ MGFV+GDSS+GVWM+LNGG + +   +  +  +E  FN  +  + SGGYGILD  W+D +E WAVGGG +M+VSKDGGK F F+ SAD IPGNLY +KFFG + GF LGS+G+L+++
Sbjct:   66 WERVS-LPVSTTLFDIAFDT--DTHGYLVGAKGTFLETVDGGKNWKPRTFANLDEEEEVGYRFEKVSFXXXXXXXXXXXXXXXXXXXXXXXXXRIPLSPKLPGEPTGVVALGKSKAEMTTSTGAIYSTTNAGRNWKAQVKETIDATLNRVSSSGVSGASYFTGSVATIQREK-DGTYLAVSSRGNFYLTWSPGQDFWLPHNRGTPRRIQAMGFVEGDSSKGVWMTLNGGQMALGGKSA-VDDAEPTFNVIN--LNSGGYGILDAAWRDSKEAWAVGGGNTMYVSKDGGKNFKFDDSADKIPGNLYAIKFFGPNTGFALGSDGVLMKF 385
[Close]
BLAST of NO03G02140 vs. NCBI_GenBank
Match: CBJ25908.1 (photosystem II stability/assembly factor HCF136 [Ectocarpus siliculosus])

HSP 1 Score: 384.8 bits (987), Expect = 3.500e-103
Identity = 188/329 (57.14%), Postives = 238/329 (72.34%), Query Frame = 0 
Query:   95 AAWEQVTDLPMGATLYDMDFDSKDPNHGWIVGSKGTFLETTDAGKTWVPRSFVDLDPDEEVTYRFERVSFXXXXXXXXXXXXXXXXXXXXXXXXXRIPLSPKLPGEPSTVFATGPNSAEMTTSTGAVYKTTNAGRNWKAQVKETIDATLNRISASGVQGASYFTGSIISVVRDDITGAYLAVSSRGNFFLTWVPGDDFWVPHNRGTSRRIQNMGFVKGDSSQGVWMSLNGGLLQVSEPAQDLSSSEDKFNFADSKIRSGGYGILDVCWKDDQEVWAVGGGGSMFVSKDGGKTFTFNKSADNIPGNLYKVKFF-GDKGFVLGSEGILLRY 423
            +AWEQ+  LP+ + LYD+ FD + P+HG +VG++GTFLET D G  W  R+F +LD +EE+ YRF++VS                          R+PLSPKLPGEPS + A G   AEMTTS+GA+Y T NAG NW AQVKET+DATLNRIS+SGV GASYFTGSII   R +  G+YLAVSSRGNF+LTW PG DFW+PHNRGTSRRIQNMGFV+  +++G+WM+LNGG +Q+S    + +S      F+++ I+SGGYGI+DV WK+D E WAVGGGGS++ S DGG+TF F+  A NI  NLY VKFF GDKGF +GS+G+LL+Y
Sbjct:   96 SAWEQI-QLPVASVLYDIAFDPEHPDHGLVVGAQGTFLETFDGGYKWSVRTFGNLDEEEEINYRFQKVSMYNDEIFIIGKPPILLHSKDAGKTWERVPLSPKLPGEPSNIVALGGAKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAE-DGSYLAVSSRGNFYLTWSPGQDFWIPHNRGTSRRIQNMGFVRDRAAEGLWMTLNGGAMQMSTTLPEGTSDP---LFSETAIKSGGYGIIDVAWKNDNEAWAVGGGGSLWYSTDGGETFKFSSGATNIGANLYDVKFFGGDKGFAIGSDGVLLKY 419
[Close]
BLAST of NO03G02140 vs. NCBI_GenBank
Match: CEM11483.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 384.0 bits (985), Expect = 5.900e-103
Identity = 190/318 (59.75%), Postives = 233/318 (73.27%), Query Frame = 0 
Query:  108 TLYDMDFDSKDPNHGWIVGSKGTFLETTDAGKTWVPRSFVDLDPDEEVTYRFERVSFXXXXXXXXXXXXXXXXXXXXXXXXXRIPLSPKLPGEPSTVFATGPNSAEMTTSTGAVYKTTNAGRNWKAQVKETIDATLNRISASGVQGASYFTGSIISVVRDDITGAYLAVSSRGNFFLTWVPGDDFWVPHNRGTSRRIQNMGFVKGDSSQGVWMSLNGGLLQVSEPAQDLSSSEDKFNFADSKIRSGGYGILDVCWKDDQEVWAVGGGGSMFVSKDGGKTFTFNKSADNIPGNLYKVKFFGDK-GFVLGSEGILLRYKG 425
            TL+D+DFD+ +P HG +VG+KGT  ET D G+TW P+S   LDP+EEV+YRF++VSF                         RI LSPKLPG P  ++  GPNSAEMTTS+GA+Y T N G NWKAQVKETIDATLNRIS+SGV GASY+TGSII+  R D +G YLAV SRGNF+L++ PG  +W PHNRG++RRIQNMGF+ GD ++GVWMSLNGG LQV   A+D +   D   F    I++GGYGI+DV WK + EVWAVGG G+M+VS DGGK+F FN +AD IPGNLY+VKFF +K GFVLGS+G+LLRY G
Sbjct:  154 TLFDIDFDASNPRHGLLVGAKGTIFETLDGGQTWNPKSLAVLDPEEEVSYRFQQVSFKDGEAWIIGQPPILLHTTDGAKTWQRIRLSPKLPGAPYGIYTLGPNSAEMTTSSGAIYTTNNGGLNWKAQVKETIDATLNRISSSGVSGASYYTGSIINQQR-DASGTYLAVGSRGNFWLSYKPGQPYWTPHNRGSNRRIQNMGFIDGDLNKGVWMSLNGGGLQV---ARDANFEVDVPTFERVNIKTGGYGIIDVSWKGNDEVWAVGGSGTMYVSTDGGKSFKFNNAADGIPGNLYRVKFFDNKQGFVLGSDGVLLRYTG 467
[Close]
BLAST of NO03G02140 vs. NCBI_GenBank
Match: XP_001712267.1 (hfc136 [Hemiselmis andersenii] >ABW97942.1 hfc136 [Hemiselmis andersenii])

HSP 1 Score: 376.3 bits (965), Expect = 1.200e-100
Identity = 210/327 (64.22%), Postives = 255/327 (77.98%), Query Frame = 0 
Query:   97 WEQVTDLPMGATLYDMDFDSKDPNHGWIVGSKGTFLETTDAGKTWVPRSFVDLDPDEEVTYRFERVSFXXXXXXXXXXXXXXXXXXXXXXXXXRIPLSPKLPGEPSTVFATGPNSAEMTTSTGAVYKTTNAGRNWKAQVKETIDATLNRISASGVQGASYFTGSIISVVRDDITGAYLAVSSRGNFFLTWVPGDDFWVPHNRGTSRRIQNMGFVKGDSSQGVWMSLNGGLLQVSEPAQDLSSSEDKFNFADSKIRSGGYGILDVCWKDDQEVWAVGGGGSMFVSKDGGKTFTFNKSADNIPGNLYKVKFFGDK-GFVLGSEGILLRY 423
            WEQV ++P+   L+D+DF   DP HGW+VGSKGTFLETTDAGKTW+PR+F +LDPDEE+TYRFE +SF XXXXXXXXXXXXXXXXXXXXXXXX  P+SPKLPGEP  + A GP++AEMTTS GA+Y T N GRNWKAQVKETID+TLNR  +SGV GASYFTG+II V+RD   G YLA+SSRGNFFLTW PG +FW+P  R TSRRIQ+MGF++ D  QG+WMS  GG L  ++   D  S  + F+F+ S I++GGYGILDV +K+  E+WA  GGG ++ S DGGK++      D + G+LYK+KFF  K GFVLGS G+LLRY
Sbjct:   85 WEQV-EIPVDTVLFDLDFVKDDPQHGWLVGSKGTFLETTDAGKTWIPRTFANLDPDEELTYRFENISFFXXXXXXXXXXXXXXXXXXXXXXXXXXPVSPKLPGEPILITALGPDTAEMTTSAGAIYVTNNGGRNWKAQVKETIDSTLNRTISSGVSGASYFTGNIIGVIRDK-NGKYLAISSRGNFFLTWQPGQEFWIPRARDTSRRIQSMGFIENDLEQGLWMSTRGGGLSFTKSQPDFDSI-NNFDFSSSDIKTGGYGILDVNFKNKDELWAACGGGILYSSIDGGKSWK-KDDEDKVIGSLYKIKFFNSKLGFVLGSNGVLLRY 407
The following BLAST results are available for this feature:
BLAST of NO03G02140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29690.14.000e-16076.53Photosystem II stability/assembly factor [Nannochl... [more]
GAX19930.11.800e-11267.57hypothetical protein FisN_1Lh599 [Fistulifera sola... [more]
GAX28610.14.500e-11166.97hypothetical protein FisN_1Hh599 [Fistulifera sola... [more]
OEU20569.11.700e-11067.98photosystem II stability/assembly factor [Fragilar... [more]
XP_002295048.15.000e-11068.37predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_002181754.14.400e-10666.47predicted protein [Phaeodactylum tricornutum CCAP ... [more]
XP_009038771.15.700e-10667.28hypothetical protein AURANDRAFT_29089 [Aureococcus... [more]
CBJ25908.13.500e-10357.14photosystem II stability/assembly factor HCF136 [E... [more]
CEM11483.15.900e-10359.75unnamed protein product [Vitrella brassicaformis C... [more]
XP_001712267.11.200e-10064.22hfc136 [Hemiselmis andersenii] >ABW97942.1 hfc136 ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL067nonsL067Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR001ncniR001Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR049ngnoR049Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005658NSK005658Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G02140.1NO03G02140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|571979gene_1400Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100114g2gene952Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G02140.1NO03G02140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G02140 ID=NO03G02140|Name=NO03G02140|organism=Nannochloropsis oceanica|type=gene|length=2206bp
GATGGCGCGGAGAAGAGGAAGATTTGTGCTGGCCTACGCACTCCTACCTT
CAATGCGTCAGCTAGGAGTAGAGTTAGAGCCTGGTTTCTTGAGAGTGGGC
ATCAAGCGAGACGAAGAGTCAAAATGGAAGTTGGTAGCGGGCAGTCATGA
GACGGCATCCCTTTAATCACCCGAAGCTTTCCCCCTCACCCCACCACCAC
ACACACGACAGCAACACGCAACGAACGACGGGCTTGGACGTCGAAGCTTG
GCTTGATTCCGGCATCGCAATTTTCACAGCATTGCCTTACACCTTCCCCA
CACATAGATTCAGGCAATGGGGAAGATAACTTCCGTCATAGTGGCGTGCA
TGACAATGCTGGTGGCGTCGCCAGCATCCGCTTTTATGCCCTTTGCAGCT
CGGCCATCCTGgtaagtgggttgatgatgctgtagggcaaatttgattgg
atggtagagcaacgagtcaagcacgcatggccttggcttcgtgaaataat
gacacaagtatgtgtgagggtaggagtgggcaagcattgtcgttggtggc
tggaaggggacaggcagcgcatcatcgacacgctacttacttgagtccgt
catgccacaacttgctcggtacttctcaaatgaaaaagtcccaactccaa
agaagcacaagccatcttgaaagagacctgaaaaattggttttcgtatcg
aagagatcaaccaaaaatccactctatcccttttcatctctcccatagCA
CAACCAAGATGAGCGCCGCCACAGAAGACAGCAGCAGCAGCAGCAGCATC
AGCAGCAGCAGCGGCAACAGTGATGCTGGTGTCTCTCGTAGGGATCTTGT
CACGTCCACCACTGTCGCAGCTGCTGCCCTTTCTGCCGTGAGTGTCATGG
GTGCCTCCGCCCAACCGGCGGCTGCTGCTTCCAATGCCGCCTGGGAGCAA
GTGACTGATTTGCCCATGGGCGCAACATTGTACGACATGGACTTCGATTC
CAAGGATCCGAACCACGGGTGGATTGTTGGTTCGAAAGGTACATTTTTGG
AGACGACCGACGCAGGTAAGACATGGGTGCCTCGCTCTTTCGTTGACTTG
GACCCCGACGAGGAAGTGACTTACCGCTTCGAACGCGTTAGCTTCAAGGA
CGGCGAGGGGTGGATTATTGGGAAGCCCCCAATTCTGTTGCACACTCAGG
ATTCAGGTAAGAGCTGGGAGCGTATTCCCCTTTCTCCAAAGCTTCCCGGG
GAGCCCTCCACTGTCTTTGCGACTGGGCCCAATTCTGCGGAGATGACCAC
GTCCACCGGCGCAGTCTATAAAACTACAAACGCCGGGCGGAACTGGAAGG
CACAGGTGAAGGAGACGATTGACGCCACTTTGAATCGAATTTCGGCCTCG
GGTGTGCAGGGGGCTTCGTATTTCACGGGTTCGATTATCTCGGTAGTGCG
TGATGACATCACCGGGGCGTACCTCGCCGTGTCCTCCCGTGGTAATTTCT
TCTTGACCTGGGTCCCGGGGGATGATTTCTGGGTTCCCCACAATAGAGGC
ACTAGCCGTCGGATTCAAAACATGGGATTTGTGAAAGGTGACAGCTCTCA
GGGTGTGTGGATGAGCTTGAATGGCGGCCTGTTGCAAGTGAGTGAGCCGG
CGCAGGATTTGTCGTCGTCCGAAGACAAGTTCAACTTCGCGGATAGTAAG
ATCCGCTCGGGGGGATATGGTATTCTGGATGTGTGTTGGAAAGATGATCA
GGAGGTGTGGGCTGTGGGAGGAGGAGGATCCATGTTCGTGTCGAAGGATG
GAGGGAAGACGTTCACGTTCAATAAGAGCGCAGACAATATTCCTGGCAAC
CTGTACAAGGTCAAGTTTTTCGGGGACAAGGGGTTTGTCTTGGGCTCGGA
GGGAATCTTGCTGCGGTATAAGGGCATTGCGTAAGCACGACATTGAATAG
GGGATGGAGAGGGAAGGTGAACAGGAGGAAGGAAGAGGGGAGCGTAGAGG
AAGACTTTCGCGTATCATTTAAAGAGCTTGTGTGTCGTGTGTGTTGTGTG
TGTGGCATGTGAGATGCGAGACAAAAGGCGAAGGTGAGAATGTGTCGTCG
CATGAAAGAAGTGCACCATGCAGTGCGTCTTATTATTTAGTGAAAAAACG
GACGGACGATTGGAAGAAAGAAAGAAAGAGTCACAACTCGCTGTGATACC
TCGACC
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protein sequence of NO03G02140.1

>NO03G02140.1-protein ID=NO03G02140.1-protein|Name=NO03G02140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=427bp
MGKITSVIVACMTMLVASPASAFMPFAARPSCTTKMSAATEDSSSSSSIS
SSSGNSDAGVSRRDLVTSTTVAAAALSAVSVMGASAQPAAAASNAAWEQV
TDLPMGATLYDMDFDSKDPNHGWIVGSKGTFLETTDAGKTWVPRSFVDLD
PDEEVTYRFERVSFKDGEGWIIGKPPILLHTQDSGKSWERIPLSPKLPGE
PSTVFATGPNSAEMTTSTGAVYKTTNAGRNWKAQVKETIDATLNRISASG
VQGASYFTGSIISVVRDDITGAYLAVSSRGNFFLTWVPGDDFWVPHNRGT
SRRIQNMGFVKGDSSQGVWMSLNGGLLQVSEPAQDLSSSEDKFNFADSKI
RSGGYGILDVCWKDDQEVWAVGGGGSMFVSKDGGKTFTFNKSADNIPGNL
YKVKFFGDKGFVLGSEGILLRYKGIA*
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Synonyms
Publications