NO03G01770, NO03G01770 (gene) Nannochloropsis oceanica

Overview
NameNO03G01770
Unique NameNO03G01770
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2848
Alignment locationchr3:553777..556624 +

Link to JBrowse

Properties
Property NameValue
DescriptionEndonuclease/exonuclease/phosphatase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:553777..556624 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036691Endo/exonu/phosph_ase_sf
IPR031615Zfn-C6H2
IPR005135Endo/exonuclease/phosphatase
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
Homology
BLAST of NO03G01770 vs. NCBI_GenBank
Match: EWM29636.1 (Endonuclease/exonuclease/phosphatase [Nannochloropsis gaditana])

HSP 1 Score: 1066.2 bits (2756), Expect = 3.900e-308
Identity = 553/649 (85.21%), Postives = 586/649 (90.29%), Query Frame = 0
Query:    2 AGNNPTGQSGLGPWMLNVRLDRPVEGCLINPHAVLYQKGEKGQQRDKERFTYCFRWLRGPERPVCANASCPRAQSFSPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKSHKRIHQQMGRNRSTGGSSADGLQDASIDPLQDGEXXXXXXXXLDYLTADTSEDEWQEVSTDRAYCPEPSDIGRCLKLEIRVLNPDGTLFFGPRLTETEPVLSAXXXXXXXXLMQVKNLAAAAGGLKFRIATYNMLAEIYATQAMYPYCDHWALNWNYRKINLLREMREVAADVLFLQEVQADHYEQHILPEMSEEGYDGLYKHKTRESMGAVGKVDGCAILWRRGKFRLADKYLLEFNDCARRQASELGLSHDQKNIFLTRVLKDNIAQAVVLEVLGRPRGGRHGGNMVCMANTHLYSHPEYPDVKLWQCHQLLQWLEGLTLPTNMPLVLCGDFNSEPSSAVYELVSTQVVGGDHPDLQLLQQ--AASNGEATELLRSVLLSDHHHQVAHSLLLKSAYATMLGDEPRFTNFTVGYVGALDYIWFSGMHWRPLTVAPIPEEHDLALTGDALPNALYPSDHLMLFSDLQFAAG----TXXXXXXXXXXXGELRKAVPGLGXXXXXXXTPTKXXXXXXGASPLLTRKGVR 645
            + N+  G  GLGPWMLNVRLDRPVEGCLI+PHA LYQKGEKGQQRDKERF Y +RWLRGPERPVCAN +CPRAQSF+PIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWK+HKRIH QMGR RS   S ADG+ DAS DPLQDGEXXXXXXXXLDYLTADTSED+WQEV ++R YCP+ SDIGRCLKLEIRVLNPDG+LFFGPRLTETEPVLSAXXXXXXXXLMQVKNLAAAA GLKFRIATYN+LAEIYATQ MYPYCDHW LNWNYRK+NLLREMREVAADVLFLQEVQADHYEQ ILPE+SEEGYDGLYKHKTRESMGA GKVDGCAILWRRGKFRLA+KYL+EFNDCARRQASELGLSHDQK+ FLTRVLKDN+AQAVVLEVLGRPRGGRHGG+MVCMANTHLYSHPE+PDVKLWQCHQLLQWLEGLTLP+NMPLVLCGDFNSEPSSAVYELVS QVVG DHPD+QLLQQ  +AS+ EATEL+RSVLLS+ HHQVAHSLLLKSAYAT+LG+EPRFTN+TVGYVG LDYIWFSGMHWRPLTVAPIP E DLA TG+ALPNALYPSDHLMLFSDLQF  G     XXXXXXXXXXX           XXXXXX TPTK       +SP LTRKGVR
Sbjct:    7 SSNSLAGTGGLGPWMLNVRLDRPVEGCLISPHAYLYQKGEKGQQRDKERFNYRYRWLRGPERPVCANTACPRAQSFNPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKNHKRIH-QMGRTRS-ANSGADGVPDASTDPLQDGEXXXXXXXXLDYLTADTSEDDWQEVGSERTYCPQLSDIGRCLKLEIRVLNPDGSLFFGPRLTETEPVLSAXXXXXXXXLMQVKNLAAAAAGLKFRIATYNILAEIYATQTMYPYCDHWTLNWNYRKVNLLREMREVAADVLFLQEVQADHYEQDILPELSEEGYDGLYKHKTRESMGASGKVDGCAILWRRGKFRLAEKYLMEFNDCARRQASELGLSHDQKHTFLTRVLKDNVAQAVVLEVLGRPRGGRHGGSMVCMANTHLYSHPEFPDVKLWQCHQLLQWLEGLTLPSNMPLVLCGDFNSEPSSAVYELVSAQVVGADHPDMQLLQQQASASSTEATELVRSVLLSEQHHQVAHSLLLKSAYATLLGEEPRFTNYTVGYVGVLDYIWFSGMHWRPLTVAPIPAEQDLACTGEALPNALYPSDHLMLFSDLQFVVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTPTKQQQQQLTSSPSLTRKGVR 653          
BLAST of NO03G01770 vs. NCBI_GenBank
Match: GAX10149.1 (CCR4-NOT transcription complex subunit 6 [Fistulifera solaris])

HSP 1 Score: 473.0 bits (1216), Expect = 1.500e-129
Identity = 263/635 (41.42%), Postives = 360/635 (56.69%), Query Frame = 0
Query:   15 WMLNVRLDRPVEGCLINPHAVLYQKGEKGQQRDKER---------------FTYCFRWLRGPERPVCANASCPRAQSFSPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKSHKRIHQQM--------GRNRSTGGSSAD----GLQDA-------SIDPL--QDGEXXXXXXXXLDYLTADT----------------SEDEWQEVSTDRAYCPEPSDIGRCLKLEIRVLNPDGTLFFGPRLTETEPVLSAXXXXXXXXLMQVKNLAAAAGGLKFRIATYNMLAEIYATQAMYPYCDHWALNWNYRKINLLREMREVAADVLFLQEVQADHYEQHILPEMSEEGYDGLYKHKTRESMGAVGKVDGCAILWRRGKFRLADKYLLEFNDCARRQASE-LGLS--HDQKNIFLTRVLKDNIAQAVVLEVLGRPRGGRHGGNMVCMANTHLYSHPEYPDVKLWQCHQLLQWLEGLTLP--TNMPLVLCGDFNSEPSSAVYELVSTQVVGGDHPDLQLLQQAASNGEATELLRSVLLSDHHHQVAHSLLLKSAYATMLGDEPRFTNFTVGYVGALDYIWFSGMHWRPLTVAPIPEEHDLALTGDALPNALYPSDHLMLFSDLQFAAG 593
            W L++R DRPVEGC++ PHA +Y  G+K  +RD ++                 + FRW RGP    CA   CPR  SF P  WSK A  G    +QCV     +   + ++FC   CF +AWK+   + ++          R+RST   S D       DA       S  P      E          +L   T                S D+W E+S D+ Y P P D+GR LKLE    + D       R+ +T+ VL+         L+  K  A + GG +FR+ +YN+LAEIYATQ  YPYCD WAL+W+YR  N+LRE+ + A +V+ LQE+QADHYE H+   MS+ G++G++K KTR+SMG  GKVDGCA+ WRR KF L + Y +EFN+ A+RQA++ LGL+   ++   F+ R+ KDNIAQ VVLE +          N +C+ANTHLYS+ ++PDVKLWQ  QLLQ LE   +   +N+PLV+CGDFNS P +AVY+L+S Q V   HPDL +    A++ +   +L   +       + HS  L SAY T+LGDEP  TN+TV + G LDYIW+S  + RPL+ AP+P+E  L L G+ALP+  + SDH+ML SD+Q   G
Sbjct:   10 WHLSLRTDRPVEGCVMKPHAYMY--GKKLDERDMDKPLAPHSKKMREPPPQHEFSFRWFRGPLHEACAYEGCPRRTSFLPHDWSKHALGGTDCTLQCV---STQSSLYKAIFCNSDCFVNAWKTQYTVPKEAVSSRNNTPMRSRSTSAGSMDEDYMNFDDAESTRSSGSKSPTYHAQNEINNNHGTPRGFLGGYTGSSHNPYNNNPAGEFLSGDDWIEISRDQLYVPGPDDVGRKLKLEAAAYSLDTGELLMSRVVKTDVVLARAPDPAKRNLVTAK--AMSGGGPRFRVVSYNVLAEIYATQQQYPYCDFWALSWDYRFQNILREILDAAPEVICLQEIQADHYENHVYAAMSDAGFEGVFKQKTRQSMGLAGKVDGCALFWRRNKFHLVESYSIEFNEVAQRQATQVLGLNPRSEEGAAFINRLSKDNIAQLVVLEFIQNTSRPSREINQICIANTHLYSNKDFPDVKLWQIWQLLQELESFIMSRGSNLPLVICGDFNSTPDTAVYDLLSRQSVHPGHPDLNM----ANSEDIPNVLPDAM------NINHSFQLGSAYQTILGDEPWVTNYTVNFKGTLDYIWYSAQNLRPLSAAPVPDEERLTLHGEALPSTEFSSDHIMLISDMQIIGG 627          
BLAST of NO03G01770 vs. NCBI_GenBank
Match: GAX16175.1 (CCR4-NOT transcription complex subunit 6 [Fistulifera solaris])

HSP 1 Score: 471.9 bits (1213), Expect = 3.300e-129
Identity = 261/635 (41.10%), Postives = 359/635 (56.54%), Query Frame = 0
Query:   15 WMLNVRLDRPVEGCLINPHAVLYQKGEKGQQRDKER---------------FTYCFRWLRGPERPVCANASCPRAQSFSPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKSHKRIHQQM--------GRNRSTGGSSAD----GLQDA---------SIDPLQDGEXXXXXXXXLDYLTADT----------------SEDEWQEVSTDRAYCPEPSDIGRCLKLEIRVLNPDGTLFFGPRLTETEPVLSAXXXXXXXXLMQVKNLAAAAGGLKFRIATYNMLAEIYATQAMYPYCDHWALNWNYRKINLLREMREVAADVLFLQEVQADHYEQHILPEMSEEGYDGLYKHKTRESMGAVGKVDGCAILWRRGKFRLADKYLLEFNDCARRQASE-LGLS--HDQKNIFLTRVLKDNIAQAVVLEVLGRPRGGRHGGNMVCMANTHLYSHPEYPDVKLWQCHQLLQWLEGLTLP--TNMPLVLCGDFNSEPSSAVYELVSTQVVGGDHPDLQLLQQAASNGEATELLRSVLLSDHHHQVAHSLLLKSAYATMLGDEPRFTNFTVGYVGALDYIWFSGMHWRPLTVAPIPEEHDLALTGDALPNALYPSDHLMLFSDLQFAAG 593
            W L++R DRPVEGC++ PHA +Y  G+K  +RD ++                 + +RW RGP    CA   CPR  SF P  WSK A  G    +QCV     +   + ++FC   CF +AWK+   + ++          R+RST   S D       DA         S       E          +L   T                S D+W E+S D+ Y P P D+GR LKLE    + D       R+ +T+ VL+         L+  K  A + GG +FR+ +YN+LAEIYATQ  YPYCD WAL+W+YR  N+LRE+ + A +V+ LQE+QADHYE H+   MS+ G++G++K KTR+SMG  GKVDGCA+ WRR KF L + Y +EFN+ A+RQA++ LGL+   ++   F+ R+ KDNIAQ VVLE +          N +C+ANTHLYS+ ++PDVKLWQ  QLLQ LE   +   +N+PLV+CGDFNS P +AVY+L+S Q V   HPDL +    A++ +   +L   +       + HS  L SAY T+LGDEP  TN+TV + G LDYIW+S  + RPL+ AP+P+E  L L G+ALP+  + SDH+ML SD+Q   G
Sbjct:   10 WHLSLRTDRPVEGCVMKPHAYMY--GKKLDERDMDKPLAPHSKKMREPPPQHEFSYRWFRGPLHEACAYEGCPRRTSFLPHDWSKHALGGTDCTLQCV---STQSSLYKAIFCNSNCFVNAWKTQYTVPKEAVSSRNNTPMRSRSTSAGSMDEDYMNFDDAESTRSSGSKSPTYYAQNEINNNHGTPRGFLGGYTGSNHNPYNNNPAGDFLSGDDWIEISRDQLYVPGPDDVGRKLKLEAAAYSLDTGELLMSRVVKTDVVLARAPDPAKRNLVTAK--AMSGGGPRFRVVSYNVLAEIYATQQQYPYCDFWALSWDYRFQNILREILDAAPEVICLQEIQADHYENHVYAAMSDAGFEGVFKQKTRQSMGLAGKVDGCALFWRRSKFHLVESYSIEFNEVAQRQATQVLGLNPRSEEGAAFINRLSKDNIAQLVVLEFIQNTSRPSREINQICIANTHLYSNKDFPDVKLWQIWQLLQELESFIMSRGSNLPLVICGDFNSTPDTAVYDLLSRQSVHPGHPDLNM----ANSEDIPNVLPDAM------NINHSFQLGSAYQTILGDEPWVTNYTVNFKGTLDYIWYSAQNLRPLSAAPVPDEERLTLHGEALPSTEFSSDHIMLISDMQIIGG 627          
BLAST of NO03G01770 vs. NCBI_GenBank
Match: EJK63707.1 (hypothetical protein THAOC_15625 [Thalassiosira oceanica])

HSP 1 Score: 451.8 bits (1161), Expect = 3.500e-123
Identity = 247/606 (40.76%), Postives = 344/606 (56.77%), Query Frame = 0
Query:   15 WMLNVRLDRPVEGCLINPHAVLYQKGEKGQQRDKE--------------RFTYCFRWLRGPERPVCANASCPRAQSFSPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKSHKRIHQQMGR--------NRSTGGSSADGLQDASIDPLQDGEXXXXXXXXLDYLTADTSEDEWQEVSTDRAYCPEPSDIGRCLKLEIRVLNPDGTLFFGPRLTETEPVLSAXXXXXXXXLMQVKNLAAAAGGLKFRIATYNMLAEIYATQAMYPYCDHWALNWNYRKINLLREMREVAADVLFLQEVQADHYEQHILPEMSEEGYDGLYKHKTRESMGAVGKVDGCAILWRRGKFRLADKYLLEFNDCARRQASE-LGL---SHDQKNIFLTRVLKDNIAQAVVLEVLGRPRGGRHGGNMVCMANTHLYSHPEYPDVKLWQCHQLLQWLEGLTLP--TNMPLVLCGDFNSEPSSAVYELVSTQVVGGDHPDLQLLQQAASNGEATELLRSVLLSDHHHQVAHSLLLKSAYATMLGDEPRFTNFTVGYVGALDYIWFSGMHWRPLTVAPIPEEHDLALTGDALPNALYPSDHLMLFSDLQFAAG 593
            W L++R+DRPVEGC + PHA +Y  G+K   R+                   + +RW +GP    CA   CPR  SFSP  WS ++  G   L   + C   +   + + FC  QCF  AWK+   + +            NR   GS  D   DA    ++ G           Y      E EW E+S    Y P P D+GR LKLE    + D       R+ +T+ VLS          +       +AGG +FR+ATYN+LAEIYATQ  YPY D W+L+W++R  N++RE+ +VA D++ LQEVQADHYE H+   M + GY+G+YK KTR++MG  GKVDGCA+ WRR KF L++ Y +EFN+ A+RQ ++ +GL   S +  N+ L ++ KDN+AQ VVLE+    R  R   N VC+ANTHLYS+ + PDVKLWQ   LLQ LE   +   TN+PL++CGDFNS P SAVY+L+S Q V   HPD+ + ++   N          +L D  + + HS +L S Y  +LG+EPR+TN+T  + G LDY+W++  + RPL+ A +P+E  +   G+ALPN  Y SDH+M  SD+Q  +G
Sbjct:   10 WHLSLRVDRPVEGCTLRPHAYMY--GKKLDDREANGNHAHSKICREPPPNHEFSYRWFKGPPVDPCAYDECPRRSSFSPHDWSTYSLGGTGVL--SLQCISSQSSLYRATFCNPQCFVQAWKTQFTLDRGADEPQARCSTPNRRRAGSYNDLDDDAREVTIEGGSSGPSTPANTAY------EQEWTEISHGEMYVPRPEDVGRKLKLEAAAYSSDSGELLMHRVVKTDLVLSRTPEPDKRNFITKSAAPGSAGGARFRVATYNILAEIYATQQQYPYADLWSLSWDFRFQNIIREIIDVAPDIVCLQEVQADHYESHLYNAMHDAGYEGVYKQKTRQAMGLTGKVDGCALFWRRTKFHLSESYSIEFNELAQRQVTQGMGLHARSEEGANL-LNKLSKDNVAQLVVLELAQATRNDRL-NNQVCIANTHLYSNKDCPDVKLWQTLHLLQELETFVMARGTNLPLMICGDFNSTPDSAVYDLLSRQTVHPGHPDVNIPEEHGPN----------VLPDAMN-ITHSHMLGSVYNAVLGEEPRYTNYTSQFRGVLDYMWYTTQNLRPLSAATVPDEGVILRHGEALPNTQYSSDHIMQISDMQIVSG 592          
BLAST of NO03G01770 vs. NCBI_GenBank
Match: XP_002176507.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50970.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 451.8 bits (1161), Expect = 3.500e-123
Identity = 251/625 (40.16%), Postives = 344/625 (55.04%), Query Frame = 0
Query:   15 WMLNVRLDRPVEGCLINPHAVLYQK------------GEKGQQRDKERFTYCFRWLRGPERPVCANASCPRAQSFSPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKSHKRIHQQM------GRNRS-------------TGGSSADGLQDASIDPLQD---------------GEXXXXXXXXLDYLTADTSEDEWQEVSTDRAYCPEPSDIGRCLKLEIRVLNPDGTLFFGPRLTETEPVLSAXXXXXXXXLMQVKNLAAAAGGLKFRIATYNMLAEIYATQAMYPYCDHWALNWNYRKINLLREMREVAADVLFLQEVQADHYEQHILPEMSEEGYDGLYKHKTRESMGAVGKVDGCAILWRRGKFRLADKYLLEFNDCARRQASE-LGLS--HDQKNIFLTRVLKDNIAQAVVLEVLGRPRGGRHGGNMVCMANTHLYSHPEYPDVKLWQCHQLLQWLEGLTLP--TNMPLVLCGDFNSEPSSAVYELVSTQVVGGDHPDLQLLQQAASNGEATELLRSVLLSDHHHQVAHSLLLKSAYATMLGDEPRFTNFTVGYVGALDYIWFSGMHWRPLTVAPIPEEHDLALTGDALPNALYPSDHLMLFSDLQ 589
            W L++R DRPVEGC + PHA +Y K              K  +    +  + +RW R P    CA  +CPR  SFSP  WS+ A  G    +QCV     +       FC   CF +AWK+   + ++       GR RS             TG   +      ++D L                 G+          Y +   + D+W E S D+ Y P P D+G  LK+E    + D +     R+ +T+ VL          L  V          +FR+ TYN+LAEIYATQ  YPYCD WAL+W+YR  N+LRE+ + + +V+ LQE+QADHYE H+   M++ G++G+YK KTR+SMG  GKVDGCA+ WRR KF L + Y +EFN+ A+RQA++ LGL+   ++   FL R+ KDN+AQ VVLE +   R  R   + VC+ANTHLYS+ ++PDVKLWQ  QLLQ LE   +   TN+PL++CGDFNS P +AVY+L+S Q V   HPD+ +     +  +   +L   +       + HS  L SAY T+LG+EP  TNFTV + G LDYIW+S  + RPL+ APIPEE  L   G+ALP+  Y SDH+ML SD+Q
Sbjct:   10 WHLSLRADRPVEGCGMRPHAYMYGKKLDEREDKTLPPHSKKMKEPPPQHEFSYRWFRSPLHEPCAYENCPRRTSFSPHDWSRHALGGTECGLQCV---STQSSLFRCTFCNSTCFVNAWKTQYSVPKEATRTETHGRTRSQSFGSNDEDVFDDTGSVRSSNGSSPALDTLSSPPPSTPRGFLSGYSAGKQLNPASGSSMYHSEYDAGDDWVEFSRDQLYMPGPEDVGHKLKIEAAAYSTDTSELLMSRVVKTDVVLGRAPDPLKRQL--VTXXXXXXXXPRFRVITYNVLAEIYATQQQYPYCDFWALSWDYRFQNILREIIDASPEVVCLQEIQADHYENHVYVAMADAGFEGVYKQKTRQSMGLAGKVDGCALFWRRSKFHLVESYSIEFNEVAQRQATQVLGLNPRSEEGVAFLNRLSKDNVAQLVVLEFIQPSRSNRE-ISQVCIANTHLYSNKDFPDVKLWQTWQLLQELESFIMSRGTNLPLIICGDFNSTPDTAVYDLLSRQTVHPGHPDVNV----TTGDDVPNVLPDAM------NITHSFQLGSAYQTVLGEEPWTTNFTVNFKGVLDYIWYSAQNLRPLSAAPIPEEKQLTKNGEALPSTEYSSDHIMLISDMQ 618          
BLAST of NO03G01770 vs. NCBI_GenBank
Match: OEU16815.1 (Exo_endo_phos-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 448.4 bits (1152), Expect = 3.900e-122
Identity = 260/647 (40.19%), Postives = 352/647 (54.40%), Query Frame = 0
Query:   15 WMLNVRLDRPVEGCLINPHAVLYQKGEKGQQRDKER---------------FTYCFRWLRGPERPVCANASCPRAQSFSPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKSHKRIHQQMGR-------NRSTGGSSADGLQD--------ASIDPLQDGEXXXXXXXXLD-----------------------------YLTAD--TSEDEWQEVSTDRAYCPEPSDIGRCLKLEIRVLNPDGTLFFGPRLTETEPVLSAXXXXXXXXLMQVKNLAAAAGGLKFRIATYNMLAEIYATQAMYPYCDHWALNWNYRKINLLREMREVAADVLFLQEVQADHYEQHILPEMSEEGYDGLYKHKTRESMGAVGKVDGCAILWRRGKFRLADKYLLEFNDCARRQASE-LGLS--HDQKNIFLTRVLKDNIAQAVVLEVLG---RPRGGRHGGNMVCMANTHLYSHPEYPDVKLWQCHQLLQWLEGLTLP--TNMPLVLCGDFNSEPSSAVYELVSTQVVGGDHPDLQLLQQAASNGEATELLRSVLLSDHHHQVAHSLLLKSAYATMLGDEPRFTNFTVGYVGALDYIWFSGMHWRPLTVAPIPEEHDLALTGDALPNALYPSDHLMLFSDLQFAAG 593
            W L++R+DRPVEGC + PH  +Y  G+K  +RD ++                 + +RW RGP    CA   C R  SFSP  WSK A  G    +QCV     +       FC   CF +AWK+   + + M R        + TG  S D ++D         S D +  G          +                             Y   +    E+EW EVS ++ Y P   DIGR LKLE    + +       R+ +T+ VL+         L+  KN A A  G +FRI +YN+LAEIYATQ  YPYCD WAL+W YR  N++RE+ + A DV+ LQEVQADHYE HI   MSE+G++G+YK KTR+SMG  GKVDGCA+ WRR KF L + Y +EFN+ A+RQA++ LGL+   ++   FL R+ KDNIAQ VVLE+       R  R   N VC+ANTHLYS+ E+PDVKLWQ  QLLQ LE   +   T++PL++CGDFNS P SAVY+L+  Q V   HPD+ +     +  +   +L   +       + HS  L S Y ++LG+EP+ TN+T+ + G LDYI +S    RPL+ +P+P+E  L   GDALP+  + SDH+ML SD+Q   G
Sbjct:   10 WHLSLRVDRPVEGCNMKPHCYMY--GKKLDERDVDKPLPSHSKKMREPPPEHEFSYRWFRGPRSEPCAYEGCTRRTSFSPHDWSKHAIGGSGCGLQCV---STQSSLFKCTFCNSNCFVEAWKTQYTVPKDMQRPSRGTPMRKRTG--SVDSMEDDLRSVGSVGSSDRINGGGGAKSPANFSEASGSSGPXXXXXXXXXXXXXXXXXXXAGPYKNGNHPQKEEEWIEVSREQFYVPGQDDIGRRLKLEAAAYSSETGELLMHRVVKTDLVLARAPDPVKRSLVTAKNGAGAGSGARFRIVSYNVLAEIYATQQQYPYCDIWALSWEYRFHNIMREIVDAAPDVICLQEVQADHYEDHIYAAMSEQGFEGVYKQKTRQSMGLAGKVDGCALFWRRTKFHLVESYSIEFNELAQRQATQVLGLNPRSEEGTNFLNRLSKDNIAQLVVLELASPQLATRTNRDPINQVCIANTHLYSNKEFPDVKLWQAWQLLQELENFAMSRGTSLPLMICGDFNSSPDSAVYDLLMRQNVHPGHPDVNI----NTGDDCPNVLPDAM------NITHSFQLGSTYQSVLGEEPQQTNYTLNFKGVLDYICYSVQTLRPLSASPVPDESVLTRHGDALPSTEFSSDHIMLISDMQILNG 639          
BLAST of NO03G01770 vs. NCBI_GenBank
Match: CBJ33581.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 426.0 bits (1094), Expect = 2.100e-115
Identity = 230/464 (49.57%), Postives = 293/464 (63.15%), Query Frame = 0
Query:   17 LNVRLDRPVEGCLINPHAVLYQK-------GEKGQQRDKERFTYCFRWLRGPERPVCANASCPRAQSFSPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKSHKRIHQQMGRNR--STGGSSADGLQDASIDPLQDGEXXXXXXXXLDYLTAD---------------TSEDEWQEVSTDRAYCPEPSDIGRCLKLEIRVLNPDGTLFFGPRLTETEPVLSAXXXXXXXXLMQVKNLAAAAGGLKFRIATYNMLAEIYATQAMYPYCDHWALNWNYRKINLLREMREVAADVLFLQEVQADHYEQHILPEMSEEGYDGLYKHKTRESMGAVGKVDGCAILWRRGKFRLADKYLLEFNDCARRQASEL-GLSHDQKNIFLTRVLKDNIAQAVVLEVLGRPRGGR--HGGNMVCMANTHLYSHPEYPDVKLWQCHQLLQWLEGLTLPTNMPLVL 454
            L++RLDRP+EGC + P   +Y K         K       RF Y   W RGPER VCANASCPRA SFSP++WSK+A +G    IQCV C KLR+PRH SVFC + CF++AW+SH++ H+ + R +  +TG        + S+       XXXXXXXX                        E+EW ++S D  Y P+  D+G CL+LE R + P G     PR+  TEPVLS         L+ VK +  + GG++FR+ +YN+LAEIYATQ  YPYCD WAL+W YRK NLLRE+ E  ADVL LQEVQ+D Y+Q   P +SE+GYDGLYK KTRE  GA+GKVDGCAI WRR KFRL++ Y + FN+CARR  + + GL  ++ + FL RV KDN+AQ  VLEVL RPRG +       +C+ANTHLYS+PE PDVKLWQC+ LLQ LEG      +PL++
Sbjct:   57 LSLRLDRPLEGCQLRPRVYVYSKLMTTTGVANKAYSNTDHRFQY--TWSRGPERQVCANASCPRANSFSPLEWSKWALQGTR--IQCVPCHKLRVPRHRSVFCNVTCFKEAWQSHRQHHEHVRRQQALATGKEQPPAASEFSLSXXXXXXXXXXXXXXXXXXXXXXXXXXXDVPINAQVMDEEEEWTKISADSLYTPKEEDVGHCLRLECRAVLPTGEEVCTPRMITTEPVLSTPPLPPRRSLVTVKGV-GSGGGVRFRLCSYNLLAEIYATQQAYPYCDFWALSWGYRKTNLLRELLEAGADVLCLQEVQSDAYQQFFQPHLSEKGYDGLYKAKTRE--GAMGKVDGCAIFWRRAKFRLSENYTVSFNECARRAVAAMPGLPQEEGHHFLMRVSKDNVAQVAVLEVLQRPRGRQVPAAAAQLCVANTHLYSNPELPDVKLWQCNALLQELEGFVHSRQLPLLV 513          
BLAST of NO03G01770 vs. NCBI_GenBank
Match: XP_002295532.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >ACI64249.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 423.7 bits (1088), Expect = 1.000e-114
Identity = 232/569 (40.77%), Postives = 327/569 (57.47%), Query Frame = 0
Query:   53 YCFRWLRGPERPVCANASCPRAQSFSPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKSHKRIHQQMGRNRSTG------GSSADGLQDASIDPLQDGEXXXXXXXXLDYLT----ADT-------------SEDEWQEVSTDRAYCPEPSDIGRCLKLEIRVLNPDGTLFFGPRLTETEPVLSAXXXXXXXXLMQVKNLAAAAGGLKFRIATYNMLAEIYATQAMYPYCDHWALNWNYRKINLLREMREVAADVLFLQEVQADHYEQHILPEMSEEGYDGLYKHKTRESMGAVGKVDGCAILWRRGKFRLADKYLLEFNDCARRQASE-LGLS--HDQKNIFLTRVLKDNIAQAVVLEVLGR--PRGGRHGGNMVCMANTHLYSHPEYPDVKLWQCHQLLQWLEGLTLP--TNMPLVLCGDFNSEPSSAVYELVSTQVVGGDHPDLQLLQQAASNGEATELLRSVLLSDHHHQVAHSLLLKSAYATMLGDEPRFTNFTVGYVGALDYIWFSGMHWRPLTVAPIPEEHDLALTGDALPNALYPSDHLMLFSDLQFAA 592
            + +RW RGP    CA   CPR  SFSP  WSK A  G    +QCV     +   + + FC   CF  AWK+   +   + + RS+       GS AD     S++ +  G            +T    A+T               +EW E+S D+ Y P  +D+GR LKLE      D       R+ +T+ VLS          +  K   +  GG +FRI TYN+LAEIYATQ  YP+ D W+L+W++R  N++RE+ +V  D++ LQEVQADHYE H+   M + G++G++K KTR+SMG  GKVDGCA+ WRR KF L + Y +EFN+ A+RQ ++ +GL+   ++    L+++ KDN+AQ VVLE+  +   R  R   N VC+ANTHLYS+ +YPDVKLWQ   LLQ LE   +   TN+PL++CGDFNS P +AVY+L+S Q V   HPD+ L      +     +L  ++       + HS +L S Y T+LG+EP+FTN+T+ + G LDY+W+S  + RPL+ APIP+E  L   GDALP+  Y SDH+M  SD+Q  +
Sbjct:   33 FSYRWFRGPTVEPCAYEGCPRRTSFSPHDWSKHALGGSGCSLQCV---STQSSLYKATFCNANCFVKAWKTQYTVQSDVPQARSSTPQRRRLGSYADDDDTRSVNSVNSGRSDYNPPGTPREITVGGNANTPRGNNGGYNDHHGQSEEWIEISRDQLYVPNENDVGRKLKLEAAAYAIDSGELLMHRVVKTDLVLSRTSELDKRNFITSK--PSGGGGARFRIVTYNILAEIYATQQQYPHADLWSLSWDFRFQNIIREIVDVGPDIVCLQEVQADHYESHLYNAMHDAGFEGVFKQKTRQSMGMTGKVDGCALFWRRTKFHLIESYSIEFNELAQRQVTQVMGLNPRSEEGAAILSKLSKDNVAQLVVLELAQQSISRSSREPINQVCIANTHLYSNKDYPDVKLWQTLHLLQELETFIMARGTNLPLMICGDFNSTPDTAVYDLLSRQAVHPGHPDVNL-----GDDNGPNVLPDIM------NITHSHMLGSVYNTVLGEEPKFTNYTMQFKGVLDYMWYSTQNLRPLSAAPIPDESVLTRYGDALPSTQYSSDHIMQISDMQIVS 585          
BLAST of NO03G01770 vs. NCBI_GenBank
Match: XP_009038613.1 (hypothetical protein AURANDRAFT_71920 [Aureococcus anophagefferens] >EGB06869.1 hypothetical protein AURANDRAFT_71920 [Aureococcus anophagefferens])

HSP 1 Score: 380.2 bits (975), Expect = 1.300e-101
Identity = 226/583 (38.77%), Postives = 315/583 (54.03%), Query Frame = 0
Query:   17 LNVRLDRPVEGCLINPHAVLYQKGEKGQQRDKERFTYCFRWLRGPERPVCANASCPR---AQSFSPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKSHKRIHQQMGRNRSTGGSSADGLQDASIDPLQDGEXXXXXXXXLDYLTADTSEDEWQEVSTDRA-YCPEPSDIGRCLKLEIRVLNPDG--TLFFGPRLTETEPVLSAXXXXXXXXLMQVKNLAAAAGGL--KFRIATYNMLAEIYATQAMYPYCDHWALNWNYRKINLLREMREVAADVLFLQEVQADHYEQHILPEMSEEGYDGLYKHKTRESMGAVGKVDGCAILWRRGKFRLADKYLLEFNDCARRQASELGLSHDQKNIFLTRVLKDNIAQAVVLEVLGRPRGGRHGGNMVCMANTHLYSHPEYPDVKLWQCHQLLQWLEGLTLPT--NMPLVLCGDFNSEPSSAVYELVSTQVVGGDHPDLQLLQQAASNGEATELLRSVLLSDHHHQVAHSLLLKSAYATMLGDEPRFTNFTVGYVGALDYIWFSGMHWRPLTVAPIPEEHDLALTGDALPNALYPSDHLMLFSDLQF 590
            + +R  RPVEGC + P  VL   G       ++     +RWLR   R V AN +CP    A  + P+  +   R+G +  +QC +C K +       FC+  CF +AW  H+R H        T  S+A G + +  D  +  +          +L+ D S   W+ V+ + A + P  S++GR L++E   + P G         +  T+ VL A              +  +  G+    R+A+YN+LAEIYAT   YPYC+ WAL W YR   +++E+ +  ADV+ LQE Q DH+E+ + P M   GY+GL+  K+RE+MGA GKVDGCA+ W+  K+R+A++  + FND A  +A    LS   ++ +LTR++KDN+AQ VVLE    P    H    + MANTHLYSH ++PD KLWQ   LL+ LE     +   +PLVL GD NS P S+VYEL+STQ +   HPDL     A   G+      +V +     Q++H L L SAYAT+ G EP FTN+T+G+ G LDYIWF     R   VA IP    L   GDALPN  YPSDH ML +D  F
Sbjct:   10 VKIRAGRPVEGCALRPQGVLRSSGP-----HEDGVELRWRWLR--SRDVVANCACPSCDFAHDYDPVNRN---RRGVA--LQCAICLKEQRAPETLTFCSAVCFVEAWPEHRRCHNHARSRAGTMESAASGDKGSFGDLARKDDEP-------HWLSDDAS--LWEIVAENVAEFVPSESEVGRRLRIECYAVRPTGREEQLRARGVAHTDAVLGAPMAPLPRSF-----IGESTEGVDPSLRVASYNILAEIYATAHAYPYCERWALEWQYRARVVIQELIDTNADVICLQEAQRDHFERDVEPAMKSAGYEGLFTQKSREAMGAAGKVDGCAMFWKTTKYRVAEQRNVSFNDLAYAEAQNANLSERDEHAYLTRLVKDNVAQLVVLEDYPAP---GHRSRRLAMANTHLYSHKDFPDTKLWQSLCLLRALESFANRSRETLPLVLAGDLNSGPDSSVYELISTQAINPRHPDL-----APRVGQ----FGAVNVLPDARQISHRLPLGSAYATVAGAEPEFTNYTMGFRGTLDYIWFDQTMLRCAAVATIPTVDALTRAGDALPNPQYPSDHTMLIADFLF 554          
BLAST of NO03G01770 vs. NCBI_GenBank
Match: OQR82903.1 (carbon catabolite repressor protein [Achlya hypogyna])

HSP 1 Score: 379.8 bits (974), Expect = 1.700e-101
Identity = 217/608 (35.69%), Postives = 319/608 (52.47%), Query Frame = 0
Query:    6 PTGQSGLGPWMLNVRLDRPVEGCLINPHAVLYQKGEKGQQRDKERFTYCFRWLRGPERPVCANASCPRAQSFSPIQWSKFARKGCSFLIQCVVCAKLRLPRHHSVFCTLQCFQDAWKSHKRIHQQMG------RNRSTGGSSADGLQDASIDPLQDGEXXXXXXXXLDYLTADTSEDEWQEVSTDRAYCPEPSDIGRCLKLEIRVLNPDGTLFFGPRLTETEPVLSAXXXXXXXXLM-QVKNLAAAAGGLKFRIATYNMLAEIYATQAMYPYCDHWALNWNYRKINLLREMREVAADVLFLQEVQADHYEQHILPEMSEEGYDGLYKHKTRESMGAVGKVDGCAILWRRGKFRLADKYLLEFNDCARRQASEL---------GLSHDQKNIFLT-------RVLKDNIAQAVVLEVLGRPRGGRHGGNM---VCMANTHLYSHPEYPDVKLWQCHQLLQWLEGLTLPTNMPLVLCGDFNSEPSSAVYELVSTQVVGGDHPDLQLLQQAASNGEATELLRSVLLSDHHHQVAHSLLLKSAYATMLGDEPRFTNFTVGYVGALDYIWFSGMHWRPLTVAPI-PEEHDLALTGDALPNALYPSDHLMLFSD 587
            P G    G   +++R+D+PVEGC +  HA  Y+  E     D + F   F W +      CAN  CPR  +         A+      I+C VC+++ +    S FCT +CF+  W +H+++H          +NR+    SA   +  S+D              L+       ++ W  +   + Y P  +D+G  L++E   +   G     P+ TET  VL          ++  +K+ A       FR+ +YN+LAEIYAT+ MYPYC  WALNW++RK  L RE++   AD+L LQEVQADHY+   LP M++ GYDGLY  KTRESMG VGKVDGCA+ +R+ +F L ++Y LEFN+ A    + L           SH +++ +         R+++DN+AQ VVL+VL  P  G     +   +C+ N H++S+PE+PDVKLWQ + LLQ +E +     +P+++CGDFNSEP SAVYEL+S   VG DHP+L+ L                       + AH++   SAYA++ G EP +TN+T  +VG +DYIWF+     P+    + P E   A     LPN  + SDH+ +  D
Sbjct:   13 PRGSPTSGEGRISLRVDQPVEGCEVTTHA-FYRSSE--GDIDDDDFHLKFFWYKSSTTRACANKQCPRVGTGEGNIVMLMAK------IECAVCSRMGIANESSGFCTPECFRSGWGNHRQLHDHAAKHPNNQKNRNATDVSAAKEKAHSLD-------------LLNAAMVPVKDESWIALQASKTYIPTSADVGHVLRVECTAMLRSGEECGPPKFTETNIVLPFPPLAPKRPMISSIKDTARVRYIGSFRVLSYNVLAEIYATRQMYPYCPMWALNWSFRKQLLKRELQLYNADILCLQEVQADHYKSFFLPMMTDLGYDGLYLQKTRESMGLVGKVDGCAMFYRKNRFYLKEQYSLEFNEAANDFVASLLASFDMAYPAASHHERDAYQASLARVRQRLVRDNVAQIVVLDVLPEPASGLARKPVLPSICVTNVHIFSNPEFPDVKLWQTNTLLQQMEQIANSRRLPIIVCGDFNSEPPSAVYELLSQNHVGSDHPELKTLADVVP----------------MTKFAHAMPFASAYASVFGTEPDYTNYTGSWVGVVDYIWFTSDKLTPVAALQVHPPEVLKAYARTCLPNCQFVSDHVPVVVD 582          
The following BLAST results are available for this feature:
BLAST of NO03G01770 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29636.13.900e-30885.21Endonuclease/exonuclease/phosphatase [Nannochlorop... [more]
GAX10149.11.500e-12941.42CCR4-NOT transcription complex subunit 6 [Fistulif... [more]
GAX16175.13.300e-12941.10CCR4-NOT transcription complex subunit 6 [Fistulif... [more]
EJK63707.13.500e-12340.76hypothetical protein THAOC_15625 [Thalassiosira oc... [more]
XP_002176507.13.500e-12340.16predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OEU16815.13.900e-12240.19Exo_endo_phos-domain-containing protein [Fragilari... [more]
CBJ33581.12.100e-11549.57conserved unknown protein [Ectocarpus siliculosus][more]
XP_002295532.11.000e-11440.77predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_009038613.11.300e-10138.77hypothetical protein AURANDRAFT_71920 [Aureococcus... [more]
OQR82903.11.700e-10135.69carbon catabolite repressor protein [Achlya hypogy... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL070nonsL070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR053ngnoR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005724NSK005724Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G01770.1NO03G01770.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|624423gene_1361Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100050g9gene1009Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G01770.1NO03G01770.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G01770 ID=NO03G01770|Name=NO03G01770|organism=Nannochloropsis oceanica|type=gene|length=2848bp
AAATCAACAGGTGTGGCCCGTCGCTGCCTGTTTTCTCTTCACTGCCGGAT
TTATTCAAGCGACCAAGAGACAGGCCGTTGCTGTCTGTTGCAGGGAGAGG
CAGCGTTGCGTGAGGGGAGGGATGGAGTCGGCTCCGACCAAAATAAGAAG
ACAGTGAACGGCATAATTAAAAAAAAAAGGAAGAAGGTCGTGATTGCCCT
GGACGGCAGGAACGAGCAAGTTAGAGGTCAAGGCACCCACAAAGAGGGGG
AAGAGGAAGGAGGAAAATAAGAACACCAGCGTACGACCTGCCTCCCCTAC
ATCCTCCCTACCATGGCCGGTAATAACCCCACAGGCCAGAGCGGCCTCGG
GCCTTGGATGCTTAATGTGCGGCTTGATCGACCCGTGGAAGGCTGTCTGA
TCAACCCGCACGCTGTGCTTTACCAAAAGGGGGAGAAAGGGCAGCAGCGA
GACAAGGAACGCTTCACCTACTGCTTCCGCTGGCTCCGAGGCCCCGAGCG
CCCCGTTTGTGCGAACGCGTCGTGTCCACGCGCTCAGTCTTTCAGTCCCA
TTCAATGGAGCAAATTCGCACGAAAGGGTTGCTCGTTTTTGATTCAATGC
GTGGTATGTGCCAAGCTGCGGTTGCCTCGGCATCACTCTGTATTTTGTAC
TTTGCAATGTTTCCAGGACGCGTGGAAAAGCCACAAGCGAATCCACCAGC
AAATGGGGCGCAACCGCAGCACCGGTGGCAGCAGTGCTGATGGCCTCCAA
GATGCGTCAATCGACCCTTTGCAGGACGGTGAAGAAGAGACGCCCCCTCC
CCCTCCTCTCGACTACCTGACCGCCGACACCTCCGAAGACGAGTGGCAAG
AAGTTAGCACCGACCGTGCATACTGCCCCGAGCCGTCCGATATTGGCCGC
TGCCTCAAGTTGGAAATCCGCGTGCTCAATCCCGATGGCACCCTCTTCTT
CGGCCCACGCCTCACAGAAACCGAACCTGTCCTGTCGGCTCCTCCCCCCC
CGCCCCAACGGCCGTTAATGCAGGTTAAAAACCTGGCCGCTGCCGCGGGA
GGGCTCAAGTTTCGAATAGCCACGTATAATATGCTGGCGGAGATTTATGC
GACGCAGGCGATGTACCCATATTGTGACCATTGGGCGTTGAATTGGAACT
ATCGAAAGATAAATTTGTTACGGGAGATGCGGGAGGTGGCGGCAGACGTC
CTCTTCCTTCAGGAGGTGCAGGCCGATCATTATGAGCAACACATCCTGCC
GGAGATGAGCGAGGAGGGATACGATGGCCTGTACAAGCACAAAACGAGGG
AGAGTATGGGGGCTGTGGGCAAAGTGGATGGGTGTGCGATTCTGTGGCGG
AGGGGCAAGTTCCGATTAGCTGgtacgtgggatgggggggagaagagcgc
ggaagggagggacggacggacggcgaggcgtttttgtaaaaggtttgatg
gtgtgtgtgtagaagtgagataatggcctgttatgtgagagcgtgtcagg
gtagtttggtgcactaatcctccctccctccctcccctccctccctaaat
agACAAGTACCTACTGGAATTTAACGACTGCGCCCGCAGGCAAGCCTCTG
AGCTGGGGCTTAGCCACGACCAGAAGAACATCTTCCTCACCCGCGTCTTG
AAGGACAATATCGCCCAGGCGGTGGTGTTGGAAGTGCTAGGTCGACCGAG
GGGTGGGAGACACGGAGGGAACATGGTCTGTATGGCCAATACCCATCTCT
ACTCTCACCCCGAATACCCGGATGTGAAGCTGTGGCAGTGCCACCAGCTA
CTGCAGTGGCTTGAGGGTTTGACGCTGCCCACCAATATGCCCTTGGTTCT
GTGCGGGGACTTCAACTCGGAGCCCTCCTCGGCGGTGTATGAGTTGGTGT
CGACTCAAGTGGTGGGAGGCGACCATCCCGACCTGCAGTTGCTGCAGCAG
GCGGCGTCGAATGGGGAGGCGACGGAGTTGTTGCGTTCAGTTTTGTTGTC
GGACCATCATCACCAGGTGGCGCATTCACTCTTGTTGAAGAGCGCGTATG
CTACCATGTTGGGGGATGAACCGCGGTTTACAAACTTCACTGTGGGGTAC
GTGGGTGCCCTGGATTACATTTGGTTCAGTGGCATGCACTGGCGTCCCCT
CACCGTAGCCCCGATCCCAGAAGAACACGACCTGGCCCTAACGGGTGACG
CGTTGCCCAACGCCTTGTACCCTTCGGATCACTTGATGTTGTTTTCCGAT
CTGCAGTTTGCAGCCGGGACCGGAGGAGGGGGGGCGGGGGGGGGAGGGCT
GATGGGGGAGTTAAGGAAAGCGGTGCCGGGATTGGGGGGAGGTCTGGGGG
GATTCGGGACTCCGACGAAGCAGCAGCAGCAGCAGCAGGGGGCGTCGCCG
TTGTTGACGCGAAAGGGGGTTAGATAGTTGTGGGGGAGCAGGGGCTGGAG
CGTTTGAAGGAGTGTGTATGTGTGCGAGTGCGCGTTCTTGTGCGTGGGTG
CACAATGTAGATGGGTAGAGAACACCGACGTGAAGAAGCCATCAAAGAGG
AGATAGTGAGGGAGGGAAGGAAAATGAAGGAGATTGCTGCCCGGGTAAAA
TGAAGGACATGAAGGGAGTAAATGAAGGGCTAGTGCATGGATGGAGGGAG
AGGGCGGAACGATGGAAAAAAATAAAATGAGTGGAAAGAAAATCAAGAAA
AAGAAAGAGAAGGACAAAAAGGTGAAAAGGGGAAGCAAAAGAATAATCGA
ACATATGCCGCTGGAGCACTGGAAAAGGTAAAAAGAGAGTGGGTCGCGAC
AAGACGACGAAAAGAAAGAACGAAAGGACAGTGGTTTCTAATTCGTGA
back to top

protein sequence of NO03G01770.1

>NO03G01770.1-protein ID=NO03G01770.1-protein|Name=NO03G01770.1|organism=Nannochloropsis oceanica|type=polypeptide|length=645bp
MAGNNPTGQSGLGPWMLNVRLDRPVEGCLINPHAVLYQKGEKGQQRDKER
FTYCFRWLRGPERPVCANASCPRAQSFSPIQWSKFARKGCSFLIQCVVCA
KLRLPRHHSVFCTLQCFQDAWKSHKRIHQQMGRNRSTGGSSADGLQDASI
DPLQDGEEETPPPPPLDYLTADTSEDEWQEVSTDRAYCPEPSDIGRCLKL
EIRVLNPDGTLFFGPRLTETEPVLSAPPPPPQRPLMQVKNLAAAAGGLKF
RIATYNMLAEIYATQAMYPYCDHWALNWNYRKINLLREMREVAADVLFLQ
EVQADHYEQHILPEMSEEGYDGLYKHKTRESMGAVGKVDGCAILWRRGKF
RLADKYLLEFNDCARRQASELGLSHDQKNIFLTRVLKDNIAQAVVLEVLG
RPRGGRHGGNMVCMANTHLYSHPEYPDVKLWQCHQLLQWLEGLTLPTNMP
LVLCGDFNSEPSSAVYELVSTQVVGGDHPDLQLLQQAASNGEATELLRSV
LLSDHHHQVAHSLLLKSAYATMLGDEPRFTNFTVGYVGALDYIWFSGMHW
RPLTVAPIPEEHDLALTGDALPNALYPSDHLMLFSDLQFAAGTGGGGAGG
GGLMGELRKAVPGLGGGLGGFGTPTKQQQQQQGASPLLTRKGVR*
back to top
Synonyms
Publications