NO03G01490, NO03G01490 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G01490 vs. NCBI_GenBank
Match: EWM29606.1 (trna rrna methyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 474.6 bits (1220), Expect = 2.900e-130 Identity = 243/338 (71.89%), Postives = 275/338 (81.36%), Query Frame = 0 Query: 33 RIPTTRTFLRTSVVVHDTRRKRKLHYDVPKPQSED-DFDNWEFGINAGWAKEHAGRKPMPKRREGG--EQYGEEGRE------NGDGEGADSL-VKDVAAATKCLSGFCTDARLERLRDIVNKRTCSIQFVFENVANPNNLWACLRSLDAFGVQYAHVIVDAAHYRKPHRLAQAKSAVGSQKWLTVTEHYSASNCVSALKAKGYLVLASDLKPGTCPTPIQDVEWAARKIAVVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSVGTAVTLAFLSSLGGLKHGDLPQEERERLVLRWLVKSVPMGTAILKREGLLVEDERVVPASDTVLGFSLWG 361 R+ + F RTSV V DTRRKRKLHYDVPKP S D +FDNWEFG+NAGW+ E+ GR K+ G + G+E E N D E D ++DVAAAT+CLS FCT ARLERLRDIVNKRT S+QFVFENVANPNNLWACLRSLDAFGVQYAHVI+D AHYRKPHRLAQAKSA+GSQKWLTV EH SAS CV+ALK +GY VLASDLKPGT P P+Q+V WAA+K+A+VMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLS TAVTLAF+SS+GGLKHGDLP E+ L+LRWL++SVP G AIL+REGLL+EDER +P S VLG+SL G Sbjct: 58 RVQRSLLFPRTSVAVCDTRRKRKLHYDVPKPDSNDGNFDNWEFGVNAGWSGENNGRSLRIKQHGDGSTQSVGKEAEEREGENHNMDHEEEDDRHIRDVAAATECLSRFCTAARLERLRDIVNKRTKSVQFVFENVANPNNLWACLRSLDAFGVQYAHVILDTAHYRKPHRLAQAKSAMGSQKWLTVREHPSASACVAALKREGYYVLASDLKPGTSPKPVQEVNWAAQKVAIVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSGSTAVTLAFVSSMGGLKHGDLPTAEKNLLLLRWLLRSVPQGPAILRREGLLIEDERFLPTSKAVLGYSLGG 395
BLAST of NO03G01490 vs. NCBI_GenBank
Match: XP_005855344.1 (trna rrna methyltransferase [Nannochloropsis gaditana CCMP526] >EKU21019.1 trna rrna methyltransferase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 405.6 bits (1041), Expect = 1.600e-109 Identity = 196/250 (78.40%), Postives = 220/250 (88.00%), Query Frame = 0 Query: 111 EGADSLVKDVAAATKCLSGFCTDARLERLRDIVNKRTCSIQFVFENVANPNNLWACLRSLDAFGVQYAHVIVDAAHYRKPHRLAQAKSAVGSQKWLTVTEHYSASNCVSALKAKGYLVLASDLKPGTCPTPIQDVEWAARKIAVVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSVGTAVTLAFLSSLGGLKHGDLPQEERERLVLRWLVKSVPMGTAILKREGLLVEDERVVPASDTVLGFSLWG 361 E D ++DVAAAT+CLS FCT ARLERLRDIVNKRT S+QFVFENVANPNNLWACLRSLDAFGVQYAHVI+D AHYRKPHRLAQAKSA+GSQKWLTV EH SAS CV+ALK +GY VLASDLKPGT P P+Q+V WAA+K+A+VMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLS TAVTLAF+SS+GGLKHGDLP E+ L+LRWL++SVP G AIL+REGLL+EDE +P S VLG++L G Sbjct: 5 EEDDRHIRDVAAATECLSRFCTAARLERLRDIVNKRTKSVQFVFENVANPNNLWACLRSLDAFGVQYAHVILDTAHYRKPHRLAQAKSAMGSQKWLTVREHPSASACVAALKREGYYVLASDLKPGTSPKPVQEVNWAAQKVAIVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSGSTAVTLAFVSSMGGLKHGDLPTAEKNLLLLRWLLRSVPQGPAILRREGLLIEDEGFLPTSKAVLGYNLGG 254
BLAST of NO03G01490 vs. NCBI_GenBank
Match: CBJ25679.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 226.1 bits (575), Expect = 1.800e-55 Identity = 120/279 (43.01%), Postives = 169/279 (60.57%), Query Frame = 0 Query: 67 DDFDNWEFGINAGW-AKEHAGRKPMPKRREGGEQYGEEGRENGDGEGADSLVKDVAAATKCLSGFCTDARLERLRDIVNKRTCSIQFVFENVANPNNLWACLRSLDAFGVQYAHVIVDAAHYRKPHRLAQAKSAVGSQKWLTVTEHYSASNCVSALKAKGYLVLASDLKPGTCPTPIQDVEWAARKIAVVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSVGTAVTLAFLSSLGGLKHGDLPQEERERLVLRWLVKSVPMGTAILKREGLLVEDE 345 D++D WEFG W + H+ R G + G D D+ A L G+ ++ RL R+ D++++RT S VFEN ANPNN+WACLR+LD+FG+Q+AH++ D + Y K RL +A+GSQKWLT+ H + V+ LK GY V+ASDL P PI +++W+ AVV+GNEERGI++ MR + D TF IPM GF SFN+SV ++ LA LS++ LKHGDLP++ER + + WL++ V ILKREG+ + E Sbjct: 75 DEWDTWEFGT---WKTRTHSENVAEAAARAAGP--AKVSTFIGTRALVDQTASDLERAVDLLKGYLSEDRLSRMEDVLDQRTRSATLVFENPANPNNVWACLRTLDSFGIQHAHIVSDPSTYSKQARLKTMCTAMGSQKWLTLHGHDRPEDAVAKLKTDGYQVVASDLSPSA--VPISEIDWSV-PTAVVLGNEERGISDSMRDMADATFVIPMRGFVRSFNMSVACSIILAHLSAVRALKHGDLPEDERREVAVTWLMQCVRGSEHILKREGIDIPQE 345
BLAST of NO03G01490 vs. NCBI_GenBank
Match: CEM03191.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 195.3 bits (495), Expect = 3.300e-46 Identity = 106/238 (44.54%), Postives = 147/238 (61.76%), Query Frame = 0 Query: 119 DVAAATKCLSGFCTDARLERLRDIVNKRTCSIQFVFENVANPNNLWACLRSLDAFGVQYAHVIVDAAHYRKPHRL-AQAKSAVGSQKWLTVTEHYSASNCVSALKAKGYLVLASDLKPGTCPTPIQDVEWAARKIAVVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSVGTAVTLAFLSSLGGLKHGDLPQEERERLVLRWLVKSVPMGTAILKREGLLVEDERVVPASDTVLG 356 D +A + LS + RLERL+ ++++RT QFVFE NPNN+WACLR+LD+FG+Q+ VI Y + + A+GS +WL++ E SAS + LK +G V ASDL+ + DV ++ +V+GNE GI+EEMR L D TF +PM GFAESFNLSV AVT A+LS +GGLK GDL + ER ++ WL++ VP +L+R+GL V ER+ +LG Sbjct: 87 DYESAVEALSPLVSPDRLERLQTVISQRTNHCQFVFEAPTNPNNVWACLRTLDSFGIQHTSVIRRPGGYDRQRDINGNMNVALGSSQWLSMQEFQSASEAIGQLKDRGVRVYASDLQEDSTALTSLDV---SQPFTIVLGNERTGISEEMRGLADETFFVPMRGFAESFNLSVACAVTCAYLSQMGGLKWGDLSEGERAAVMTEWLMRCVPGSQQVLERKGLRV-PERLRRTRQRLLG 320
BLAST of NO03G01490 vs. NCBI_GenBank
Match: OEU07493.1 (SpoU_methylase-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 172.9 bits (437), Expect = 1.800e-39 Identity = 93/236 (39.41%), Postives = 147/236 (62.29%), Query Frame = 0 Query: 120 VAAATKCLSGFCTDARLERLRDIVNKRTCSIQFVFENVANPNNLWACLRSLDAFGVQYAHVIVDAAHYRKPHRLAQAK----SAVGSQKWLTVTEHYSASNCVSALK-AKGYLVLASDLKPGTCPTPIQDVEWAARKIAVVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSVGTAVTLAFL------SSLGGLKHGDLPQEERERLVLRWLVKSVP---MGTAILKREGLLV 342 V+ AT L + + R +R+ ++ RT +++F++EN ANP+N+WACLR++D+FG+Q +I+D+ Y + + K +A+GS +WLT+T + S + ++ +GY + ASDL P + + R I +VMGNE+RGI++EMR L D TF +PM GFAESFNLSV T++ LA + SS G L+ GDL + E L L+ L+KS+P +G A+LK+ +++ Sbjct: 8 VSKATSILEPWINEKRQQRITTVLKHRTRNVKFLYENPANPSNVWACLRTIDSFGIQNVDLIIDSGMYGEGKQTLMQKRGMRTAMGSAQWLTLTNYPSTKEAIQHIREVQGYKIYASDLNPNSIDIHQNQDQ---RPICIVMGNEDRGISDEMRLLADETFTLPMYGFAESFNLSVATSIILAHMSSKSVESSTGPLRPGDLNEHEYNCLYLKGLLKSLPKKRLGIALLKKNDIIL 240
BLAST of NO03G01490 vs. NCBI_GenBank
Match: XP_002297028.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED86756.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 168.3 bits (425), Expect = 4.400e-38 Identity = 96/256 (37.50%), Postives = 151/256 (58.98%), Query Frame = 0 Query: 127 LSGFCTDARLERLRDIVNKRTCSIQFVFENVANPNNLWACLRSLDAFGVQYAHVIVDAAHYRKPHRLAQ---AKSAVGSQKWLTVTEHYSASNCVSALK-AKGYLVLASDLKPGTCPTPIQDVEW----------------AARKIAVVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSVGTAVTLAFLSSLGG------------------LKHGDLPQEERERLVLRWLVKSVP---MGTAILKREGLLV 342 L+ + RLER+ +++N+RT +F+FEN +NP+N+WACLR+LD+FG+QY VI+ + Y+ + Q ++A+GS W+T+ + S +++L+ + L+ ASDL P + ++D+ W R I +VMGNEERGI+++MR L D TF +PM GFAESFNLSV TA+TLA++S++ G L+ GDL E + L L+ + S+ MG A+LK+EG+++ Sbjct: 282 LTPYVQPRRLERIDEVLNQRTRHTRFLFENPSNPSNVWACLRTLDSFGIQYVDVIIHSDSYQGKAAVNQKRGMRTAMGSACWMTLRQFGSIEAAITSLREEEDCLIYASDLNPAS--MDVRDLNWDVDYSSGGNADSDQQKEQRPICIVMGNEERGISDKMRELADETFYLPMCGFAESFNLSVATAITLAYMSAVSGRGGADEDSNEGGSGTKGPLRPGDLDPHELQCLRLKGAINSLAQKRMGKALLKKEGIVL 535
BLAST of NO03G01490 vs. NCBI_GenBank
Match: GAX29037.1 (tRNA (guanosine-2'-O-)-methyltransferase [Fistulifera solaris]) HSP 1 Score: 167.2 bits (422), Expect = 9.800e-38 Identity = 96/236 (40.68%), Postives = 147/236 (62.29%), Query Frame = 0 Query: 117 VKDVAAATKCLSGFCTDARLERLRDIVNKRTCSIQFVFENVANPNNLWACLRSLDAFGVQYAHVIVDAAHYRKPHRLAQ---AKSAVGSQKWLTVTEHYSASNCVSALKAKGY------LVLASDLKPGTCPTPIQDVEWAARK-IAVVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSVGTAVTLAFLSSLGGLKHGDLPQEERERLVLRWLVKSVP---MGTAILKREGL 340 VKD AA L + +R+ER++ ++ KRT +++F+FEN ANP+N++ACLR+LD+FG+Q A V + + Y+ L+Q K+A+GS +W+T+ ++ + + Y + AS L P I+D+EW + I +VMGNEERGIT EM+ D F +PM+GFAESFNLSV TA+T A LS+ L +L Q+++E L+L+ L+ S+P M A+LK+ G+ Sbjct: 112 VKDSIAA---LLPYVRPSRVERIQSVLEKRTQNVRFLFENPANPSNVFACLRTLDSFGIQDADVFLQPSLYQGTMALSQKKGVKTAMGSAQWMTLQQYIIQQDATLTSTLQKYKQQHNCRIYASCLSPDA--KDIRDIEWPTNESICIVMGNEERGITTEMKDAADELFTLPMVGFAESFNLSVATAITCAHLSTQPDLLRPNLSQDQQELLLLQGLIHSIPQKRMSKALLKQAGI 342
BLAST of NO03G01490 vs. NCBI_GenBank
Match: GAX11272.1 (tRNA (guanosine-2'-O-)-methyltransferase [Fistulifera solaris]) HSP 1 Score: 158.3 bits (399), Expect = 4.500e-35 Identity = 98/283 (34.63%), Postives = 156/283 (55.12%), Query Frame = 0 Query: 80 WAKEHAGRKPMPKRREGGEQYGEEGRENGDGEGADSLVK----------DVAAATKCLSGFCTDARLERLRDIVNKRTCSIQFVFENVANPNNLWACLRSLDAFGVQYAHVIVDAAHYRKPHRLAQ---AKSAVGSQKWLTVTEHYSASNCVSALKAKGY------LVLASDLKPGTCPTPIQDVEWAA-RKIAVVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSVGTAVTLAFLSSLGGLKHGDLPQEERERLVLRWLVKSVP---MGTAILKREGL 340 W RKP R + +E ++ S+ K V + L + AR+ER++ ++ KRT +++F+FEN ANP+N++ACLR+LD+FG+QYA V + + Y+ L+Q K+A+GS +W+T+ ++ + + Y + AS L P I+++ W + + I +VMGNEERGIT EMR D F +PM+GFAESFNLSV TA+ A LS+ L +L + +++ L+L+ L+ S+P M A+LK+ G+ Sbjct: 34 WETFEFSRKPKSDARFFQQNADDEDKQQSQNNSNPSINKQQLWQSLSLTQVQNSIATLLPYVRPARVERIQSVLAKRTQNVRFLFENPANPSNVFACLRTLDSFGIQYADVFLQPSLYQGTMALSQKKGVKTAMGSAQWMTLQQYIIQQDATLTSTLEKYKQQHNCRIYASCLSPDA--KDIREIVWPSDQTICIVMGNEERGITTEMRHAADELFTLPMVGFAESFNLSVATAIACAHLSTQPNLLRPNLSEHQQQLLLLQGLIHSIPQKRMSKALLKQAGI 314
BLAST of NO03G01490 vs. NCBI_GenBank
Match: EJK49840.1 (hypothetical protein THAOC_31244 [Thalassiosira oceanica]) HSP 1 Score: 152.9 bits (385), Expect = 1.900e-33 Identity = 85/219 (38.81%), Postives = 129/219 (58.90%), Query Frame = 0 Query: 120 VAAATKCLSGFCTDARLERLRDIVNKRTCSIQFVFENVANPNNLWACLRSLDAFGVQYAHVIVDAAHYRKPHRLAQ---AKSAVGSQKWLTVTEHYSASNCVSALK-AKGYLVLASDLKPGTCPTPIQDVEWAA--------------------------RKIAVVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSVGTAVTLAFLSSLGGLKHG 309 V+ + L+ + RLER+ +++++RT +F+FEN +NP+N+WACLR+LD+FGVQ+A V+VD Y + Q ++A+GS W+TV + SA + ++ +G V ASDL G+ ++D+ W R + +VMGNE+RGI++ MRS D TF++PM+GFAESFNLSV TAVTLA++S+ G G Sbjct: 76 VSRSIAALAPYVRPRRLERIDEVLSRRTGRARFLFENPSNPSNVWACLRTLDSFGVQHADVVVDPDAYDGKAAVMQKRGMRTAMGSAVWMTVRQFGSADEALRVIRDEEGCAVYASDLGEGS--VDVRDLSWDGRDCPERCPDAPAGGGGRDAGDGVAEYRPVCIVMGNEDRGISDGMRSAADATFRLPMVGFAESFNLSVATAVTLAYMSAASGRDGG 292
BLAST of NO03G01490 vs. NCBI_GenBank
Match: XP_009038316.1 (hypothetical protein AURANDRAFT_14487, partial [Aureococcus anophagefferens] >EGB07083.1 hypothetical protein AURANDRAFT_14487, partial [Aureococcus anophagefferens]) HSP 1 Score: 140.2 bits (352), Expect = 1.300e-29 Identity = 74/171 (43.27%), Postives = 101/171 (59.06%), Query Frame = 0 Query: 127 LSGFCTDARLERLRDIVNKRTCSIQFVFENVANPNNLWACLRSLDAFGVQYAHVIVDAAHYRKPHRLAQAKSAVGSQKWLTVTEHYSASNCVSALKAKGYLVLASDLKPGTCPTPIQDVEWAARKIAVVMGNEERGITEEMRSLCDGTFQIPMMGFAESFNLSVGTAVTLA 298 L+ + + R + +RT ++ FE +NP N WACLR++DAFGVQ V+ D A+ +A+G+QKWLT+ EH + + V AL A GY V A+DL PG+ PI DV+WAA A+V GNEE GI+E++R+ D +PM G AES NLSV LA Sbjct: 1 LAPYVSPERKAAFVKVAGQRTAHLRVAFERPSNPANAWACLRTIDAFGVQDVDVVKDTLE-------ARMHAAMGAQKWLTLREHDAPGDLVDALHAAGYKVAATDLGPGS--RPIGDVDWAAEPYALVFGNEETGISEDLRARADVRVHLPMRGLAESLNLSVSVGACLA 162 The following BLAST results are available for this feature:
BLAST of NO03G01490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G01490 ID=NO03G01490|Name=NO03G01490|organism=Nannochloropsis oceanica|type=gene|length=1098bpback to top protein sequence of NO03G01490.1 >NO03G01490.1-protein ID=NO03G01490.1-protein|Name=NO03G01490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=366bpback to top Synonyms
Publications
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