NO03G01150, NO03G01150 (gene) Nannochloropsis oceanica

Overview
NameNO03G01150
Unique NameNO03G01150
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1745
Alignment locationchr3:356844..358588 -

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Properties
Property NameValue
DescriptionPeptide chain release factor 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:356844..358588 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003747translation release factor activity
GO:0008135translation factor activity, RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006415translational termination
GO:0016043cellular component organization
Vocabulary: INTERPRO
TermDefinition
IPR000352Pep_chain_release_fac_I_II
IPR005139PCRF
Homology
BLAST of NO03G01150 vs. NCBI_GenBank
Match: EWM29586.1 (peptide chain release factor 1 [Nannochloropsis gaditana])

HSP 1 Score: 541.2 bits (1393), Expect = 3.000e-150
Identity = 312/432 (72.22%), Postives = 344/432 (79.63%), Query Frame = 0
Query:    7 IGCCATNRQATARTANTCTS---PPSTTSTRRRPLLHASSLLRAPRRPLSTFTPAVLTRLDQMRVRHAQVEDELNSLHTAASADGSGQPQQQYQSGSQSAVMRLAALSKELXXXXXXXXXXXXXXKHRADVRFLEDTAKGDPDPEMAAMAKEDVASARNAVVALEERVLRRLLPKDAGDDDRGVILEVRAGTGGDEASLFAGEVFGMYERFAAAQKWRFEILSASKNEFGGLKEAAAAVQGHLAYPALKFESGVHRVQRVPVNDSRLHTSAATVAVLPEPQEVDFKLDTRDLKFDVYRASGAGGQHVNTTESAVRVTHVPSGIVVAIQDERSQHKNKDKAIKILRARVYEREQAKVMAAQASTRKSQVGSGDRSERIRTYNFAQDRVTDHRISLSKHGIDRMMGGELLKEFSEALQSAEEAEKLRQLLKGEV 436
            + C       T RTA T ++    P     RRRP     +         STFTPAVLTRLDQMR R+AQVE EL++LHT  +                             XXXXXXXXXXX   KHR++VRFLE+T KGDPDP+MAAMAKEDV SAR+AV ALEE++LR+LLPK+  +DDRGVILEVRAGTGGDEASLFAGE+F MYERFAA Q WRFEIL+ SKNEFGGLKEAAAAVQGH+AYP LKFESGVHRVQRVPVNDSRLHTSAATVAVLPEPQ+VDFKLD RDLKFDVYRASGAGGQHVNTTESAVRVTH P+G+VV+IQDERSQHKNKDKAIKILRARVYE EQA+VMAAQAS RKSQVGSGDRSERIRTYNF+QDRVTDHRISLSKHGIDRMM G+LL EF EAL+SAEEAE+LR LL+GE+
Sbjct:    3 VSCVLRRLGGTRRTATTTSAFSHVPFWPCIRRRPRPQTRAPPSKSWSLFSTFTPAVLTRLDQMRQRYAQVEKELSALHT-GNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLEKHRSNVRFLEETVKGDPDPDMAAMAKEDVGSARDAVTALEEKILRQLLPKELKNDDRGVILEVRAGTGGDEASLFAGEMFDMYERFAARQNWRFEILNVSKNEFGGLKEAAAAVQGHMAYPLLKFESGVHRVQRVPVNDSRLHTSAATVAVLPEPQDVDFKLDARDLKFDVYRASGAGGQHVNTTESAVRVTHTPTGLVVSIQDERSQHKNKDKAIKILRARVYEMEQARVMAAQASARKSQVGSGDRSERIRTYNFSQDRVTDHRISLSKHGIDRMMDGDLLGEFGEALRSAEEAERLRLLLEGEI 433          
BLAST of NO03G01150 vs. NCBI_GenBank
Match: AMK98482.1 (mitochondrial peptide chain release factor 1 [Monodopsis sp. MarTras21])

HSP 1 Score: 513.5 bits (1321), Expect = 6.600e-142
Identity = 275/383 (71.80%), Postives = 316/383 (82.51%), Query Frame = 0
Query:   52 LSTFTPAVLTRLDQMRVRHAQVEDELNSLHTAASADGSGQPQQQYQSGSQSAVMRLAALSKELXXXXXXXXXXXXXXKHRADVRFLEDTAKGDPDPEMAAMAKEDVASARNAVVALEERVLRRLLPKDAGDDDRGVILEVRAGTGGDEASLFAGEVFGMYERFAAAQKWRFEILSASKNEFGGLKEAAAAVQGHLAYPALKFESGVHRVQRVPVNDSRLHTSAATVAVLPEPQEVDFKLDTRDLKFDVYRASGAGGQHVNTTESAVRVTHVPSGIVVAIQDERSQHKNKDKAIKILRARVYEREQAKVMAAQASTRKSQVGSGDRSERIRTYNFAQDRVTDHRISLSKHGIDRMMGGELLKEFSEALQSAEEAEKLRQLLKGE 435
            +STFT AVL RL+ M+ RHA+VE ELN +H+  S+  S  P             RLA LSKEL                RA+V FLE T   DPDPEMAAMAK+++ SAR AVV +E  VL+RLLPKD G++DRG+ILEVRAGTGGDEASLFA E+F MYE+FA+A +WRFEIL++S+NEFGG+KEAAAAVQGH AY  +K+ESGVHRVQRVPVNDSRLHTSAATVAVLPEP EVDFKL+ RDLKFDV+RASGAGGQHVNTTESAVRVTH+P+G VV+IQDERSQHKNKDKAIKILRARVYEREQA+VMA QAS RKSQVGSGDRSERIRTYNFAQDRVTDHRISL+KHGIDRMM GE+L+EF+ A++ AEEAEKL+QLL+G+
Sbjct:   84 MSTFTQAVLNRLETMKARHAEVETELNEMHSTTSST-SVPPH------------RLAQLSKELATLSEMVALIEDLEAKRAEVGFLEKTL-DDPDPEMAAMAKDELESAREAVVEMERVVLKRLLPKDEGEEDRGLILEVRAGTGGDEASLFANEIFAMYEKFASANRWRFEILNSSRNEFGGIKEAAAAVQGHEAYIKMKYESGVHRVQRVPVNDSRLHTSAATVAVLPEPHEVDFKLEQRDLKFDVFRASGAGGQHVNTTESAVRVTHIPTGTVVSIQDERSQHKNKDKAIKILRARVYEREQARVMAEQASERKSQVGSGDRSERIRTYNFAQDRVTDHRISLTKHGIDRMMEGEMLEEFALAMKEAEEAEKLKQLLEGD 452          
BLAST of NO03G01150 vs. NCBI_GenBank
Match: AMK98478.1 (mitochondrial peptide chain release factor 1 [Vischeria sp. CAUP Q 202])

HSP 1 Score: 446.4 bits (1147), Expect = 9.900e-122
Identity = 243/384 (63.28%), Postives = 292/384 (76.04%), Query Frame = 0
Query:   50 RPLSTFTPAVLTRLDQMRVRHAQVEDELNSLHTAASADGSGQPQQQYQSGSQSAVMRLAALSKELXXXXXXXXXXXXXXKHRADVRFLEDTAKGDPDPEMAAMAKEDVASARNAVVALEERVLRRLLPKDAGDDDRGVILEVRAGTGGDEASLFAGEVFGMYERFAAAQKWRFEILSASKNEFGGLKEAAAAVQGHLAYPALKFESGVHRVQRVPVNDSRLHTSAATVAVLPEPQEVDFKLDTRDLKFDVYRASGAGGQHVNTTESAVRVTHVPSGIVVAIQDERSQHKNKDKAIKILRARVYEREQAKVMAAQASTRKSQVGSGDRSERIRTYNFAQDRVTDHRISLSKHGIDRMMGGELLKEFSEALQSAEEAEKLRQLLKG 434
            R +S FTP++  RL  M+ RH ++E EL ++H                SG++    +LA+L+KEL          XXXX       FLE T   DPDPEMAAMAKE+V  AR  V +LE  +LR LLP+D G DDR +ILEVRAGTGGDEA LF  EVF MYER+AA  +WRF+IL+  K + GGL+EA A+V G  AY  LK+ESGVHRVQRVPVND R+HTSA TVAVLPEPQ+VD ++D +DLK DVYRASGAGGQHVNTTESAVRVTH+P+G+VVAIQDERSQHKNKDKA+KILRARVYE+E+ ++MA QAS RK QVGSGDRSERIRTYNFAQDR+TDHR+SLSKHG++RM+ GELL++FS AL+  EE EKL+QLL+G
Sbjct:   67 RLMSGFTPSLEKRLQLMKARHGELEKELAAMHEGG-------------SGNRMQPQKLASLNKELSDLSEVVELMXXXXXXXXXXAFLEITL-NDPDPEMAAMAKEEVERAREGVSSLEGAILRLLLPRDDG-DDRNLILEVRAGTGGDEAGLFTAEVFTMYERYAALNRWRFDILTYQKGDIGGLREATASVSGSEAYQKLKYESGVHRVQRVPVNDVRIHTSAMTVAVLPEPQDVDLRIDNKDLKIDVYRASGAGGQHVNTTESAVRVTHIPTGVVVAIQDERSQHKNKDKALKILRARVYEKERERIMAQQASDRKLQVGSGDRSERIRTYNFAQDRITDHRVSLSKHGMERMLNGELLEDFSAALRGKEETEKLQQLLEG 435          
BLAST of NO03G01150 vs. NCBI_GenBank
Match: AMK98476.1 (mitochondrial peptide chain release factor 1 [Trachydiscus minutus])

HSP 1 Score: 414.1 bits (1063), Expect = 5.500e-112
Identity = 237/401 (59.10%), Postives = 301/401 (75.06%), Query Frame = 0
Query:   33 TRRRPLLHASSLLRAPRRPLSTFTPAVLTRLDQMRVRHAQVEDELNSLHTAASADGSGQPQQQYQSGSQSAVMRLAALSKELXXXXXXXXXXXXXXKHRADVRFLEDTAKGDPDPEMAAMAKEDVASARNAVVALEERVLRRLLPKDAGDDDRGVILEVRAGTGGDEASLFAGEVFGMYERFAAAQKWRFEILSASKNEFGGLKEAAAAVQGHLAYPALKFESGVHRVQRVPVNDSRLHTSAATVAVLPEPQEVDFKLDTRDLKFDVYRASGAGGQHVNTTESAVRVTHVPSGIVVAIQDERSQHKNKDKAIKILRARVYEREQAKVMAAQASTRKSQVGSGDRSERIRTYNFAQDRVTDHRISLSKHGIDRMMGGELLKEFSEALQSAEEAEKLRQLLKG 434
            +R+   L   SL+  PRR L+TF+PA++ RL  ++ R+ ++E ELN+LH                SG Q    +LA L++  XXXXXXXXXXXXXX            +K DPDPE+A MAKE++   +  + +L   VLR LLP+D G  DRGV+LEVRAGTGGDEA+LF  E+F MY+++A+ + WRFE+L+ SK++ GG KEA+AA+QG   Y  LK ESGVHRVQRVPVND+RLHTSAATVAVLPEP+EVD +LD RDLK+DV+RASGAGGQHVNTTESAVRVTH+P+GIVVAIQDERSQHKNKDKA+KILRAR++E+EQ +V   QAS         DRSERIRTYN+AQDRVTDHR++L+K+GI+RM+ GE+++E++ AL  AEE EKL+QLL+G
Sbjct:   24 SRQAVFLRPRSLVGHPRRSLATFSPAIVNRLAMVQTRYNELEAELNALHVG--------------SGKQPTPQQLAKLNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXSK-DPDPEIANMAKEELGKVQEGLESLHAEVLRCLLPRDEG-GDRGVVLEVRAGTGGDEAALFTAEIFIMYQKYASLRGWRFEVLTESKSDLGGYKEASAAIQGDQVYQRLKHESGVHRVQRVPVNDTRLHTSAATVAVLPEPEEVDLRLDPRDLKYDVFRASGAGGQHVNTTESAVRVTHIPTGIVVAIQDERSQHKNKDKALKILRARIFEKEQERVRQEQASXXXXXXXXXDRSERIRTYNYAQDRVTDHRVNLTKYGIERMLSGEMVEEYTRALLQAEETEKLKQLLEG 408          
BLAST of NO03G01150 vs. NCBI_GenBank
Match: WP_088153088.1 (peptide chain release factor 1 [Inquilinus limosus] >OWJ65089.1 peptide chain release factor 1 [Inquilinus limosus])

HSP 1 Score: 339.7 bits (870), Expect = 1.300e-89
Identity = 195/363 (53.72%), Postives = 251/363 (69.15%), Query Frame = 0
Query:   72 QVEDELNSL--HTAASADGSGQPQQQYQSGSQSAVMRLAALSKELXXXXXXXXXXXXXXKHRADVRFLEDTAKGDPDPEMAAMAKEDVASARNAVVALEERVLRRLLPKDAGDDDRGVILEVRAGTGGDEASLFAGEVFGMYERFAAAQKWRFEILSASKNEFGGLKEAAAAVQGHLAYPALKFESGVHRVQRVPVNDS--RLHTSAATVAVLPEPQEVDFKLDTRDLKFDVYRASGAGGQHVNTTESAVRVTHVPSGIVVAIQDERSQHKNKDKAIKILRARVYEREQAKVMAAQASTRKSQVGSGDRSERIRTYNFAQDRVTDHRISLSKHGIDRMMGGELLKEFSEALQSAEEAEKLRQL 431
            Q+++ LN +    A   DG G       SG  S   +  A SKE               K RA++  LE  A  + DPEM A+A+E++ + R+++ ALE RV   LLPKD   DDR  ILEVRAGTGGDEA+LFA ++F MY+R+AA + WRFE++  +    GG KEA+A + G   +  LKFESG HRVQRVP  ++  R+HTSAATVAVLPE +EVD ++D +DL+ DV+RA GAGGQHVN TESAVR+TH+P+GIVV +QDE+SQHKN+ KA+KILRAR+YE E+A   A +A+ RKSQVGSGDRSERIRTYNF Q RVTDHRI+L+ + I+R+M GE L E  EAL + +EA +L  L
Sbjct:    2 QLDENLNRVLSRVAELRDGMG-------SGKLSP-DQFTAYSKEYSELEPIADEITALHKGRAELAQLEAMAAAETDPEMKALAQEELFALRDSLPALERRVQVLLLPKDEA-DDRNAILEVRAGTGGDEAALFAADLFRMYQRYAAIRGWRFEVMDIADTPLGGYKEASAEISGRGVFARLKFESGAHRVQRVPETEAQGRIHTSAATVAVLPEAEEVDVQIDDKDLRVDVFRAQGAGGQHVNKTESAVRITHLPTGIVVVMQDEKSQHKNRAKAMKILRARLYEAERAAKDAVRAADRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKIERVMAGEALDELVEALIAEDEAARLAAL 355          
BLAST of NO03G01150 vs. NCBI_GenBank
Match: WP_026873170.1 (peptide chain release factor 1 [Inquilinus limosus])

HSP 1 Score: 339.0 bits (868), Expect = 2.200e-89
Identity = 195/363 (53.72%), Postives = 249/363 (68.60%), Query Frame = 0
Query:   72 QVEDELNSL--HTAASADGSGQPQQQYQSGSQSAVMRLAALSKELXXXXXXXXXXXXXXKHRADVRFLEDTAKGDPDPEMAAMAKEDVASARNAVVALEERVLRRLLPKDAGDDDRGVILEVRAGTGGDEASLFAGEVFGMYERFAAAQKWRFEILSASKNEFGGLKEAAAAVQGHLAYPALKFESGVHRVQRVPVNDS--RLHTSAATVAVLPEPQEVDFKLDTRDLKFDVYRASGAGGQHVNTTESAVRVTHVPSGIVVAIQDERSQHKNKDKAIKILRARVYEREQAKVMAAQASTRKSQVGSGDRSERIRTYNFAQDRVTDHRISLSKHGIDRMMGGELLKEFSEALQSAEEAEKLRQL 431
            Q+++ LN +    A   DG G       SG  S   +  A SKE               + RA++  LE  A  + DPEM A+A+E++   R  + +LE RV   LLPKD   D+R  ILEVRAGTGGDEA+LFA ++F MY+R+AA + WRFE+L  +    GG KEA+A + G   +  LKFESG HRVQRVP  ++  R+HTSAATVAVLPE +EVD ++D +DL+ DV+RA GAGGQHVN TESAVRVTH+P+GIVV +QDE+SQHKN+ KA+KILRAR+YE E+A   AA+A+ R+SQVGSGDRSERIRTYNF Q RVTDHRI+L+ + IDR+M GE L E  EAL + +EA +L  L
Sbjct:    2 QLDENLNRVLSRVAELRDGMG-------SGKLSP-DQFTAYSKEYSELEPIAEEIAALRRARAELTQLESMAAAETDPEMRALAQEELTELRERLPSLERRVQVLLLPKDEA-DERNAILEVRAGTGGDEAALFAADLFRMYQRYAAIRGWRFEVLDIADTPLGGYKEASAEISGRGVFARLKFESGAHRVQRVPETEAQGRIHTSAATVAVLPEAEEVDVQIDEKDLRVDVFRAQGAGGQHVNKTESAVRVTHLPTGIVVVMQDEKSQHKNRAKAMKILRARLYEAERAAKDAARAADRRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKIDRVMAGEALDELIEALIAEDEAARLAAL 355          
BLAST of NO03G01150 vs. NCBI_GenBank
Match: WP_034847139.1 (peptide chain release factor 1 [Inquilinus limosus] >KGM30934.1 peptide chain release factor 1 [Inquilinus limosus MP06])

HSP 1 Score: 338.6 bits (867), Expect = 2.900e-89
Identity = 194/363 (53.44%), Postives = 251/363 (69.15%), Query Frame = 0
Query:   72 QVEDELNSL--HTAASADGSGQPQQQYQSGSQSAVMRLAALSKELXXXXXXXXXXXXXXKHRADVRFLEDTAKGDPDPEMAAMAKEDVASARNAVVALEERVLRRLLPKDAGDDDRGVILEVRAGTGGDEASLFAGEVFGMYERFAAAQKWRFEILSASKNEFGGLKEAAAAVQGHLAYPALKFESGVHRVQRVPVNDS--RLHTSAATVAVLPEPQEVDFKLDTRDLKFDVYRASGAGGQHVNTTESAVRVTHVPSGIVVAIQDERSQHKNKDKAIKILRARVYEREQAKVMAAQASTRKSQVGSGDRSERIRTYNFAQDRVTDHRISLSKHGIDRMMGGELLKEFSEALQSAEEAEKLRQL 431
            Q+++ LN +    A   DG G       SG  S   +  A SKE               K RA++  LE     + DPEM A+A+E++ + R+++ ALE RV   LLPKD   DDR  ILEVRAGTGGDEA+LFA ++F MY+R+AA + WRFE++  +    GG KEA+A + G   +  LKFESG HRVQRVP  ++  R+HTSAATVAVLPE +EVD ++D +DL+ DV+RA GAGGQHVN TESAVR+TH+P+GIVV +QDE+SQHKN+ KA+KILRAR+YE E+A   AA+A+ R+SQVGSGDRSERIRTYNF Q RVTDHRI+L+ + I+R+M GE L E  EAL + +EA +L  L
Sbjct:    2 QLDENLNRVLSRVAELRDGMG-------SGKLSP-DQFTAYSKEYSELEPIADEITALHKGRAELAQLEAMVAAETDPEMKALAQEELFALRDSLPALERRVQVLLLPKDEA-DDRNAILEVRAGTGGDEAALFAADLFRMYQRYAAIRGWRFEVMDIADTPLGGYKEASAEISGRGVFARLKFESGAHRVQRVPETEAQGRIHTSAATVAVLPEAEEVDVQIDDKDLRVDVFRAQGAGGQHVNKTESAVRITHLPTGIVVVMQDEKSQHKNRAKAMKILRARLYEAERAAKDAARAADRRSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKIERVMAGEALDELVEALIAEDEAARLAAL 355          
BLAST of NO03G01150 vs. NCBI_GenBank
Match: WP_044564286.1 (peptide chain release factor 1 [Azospirillum sp. B4])

HSP 1 Score: 338.2 bits (866), Expect = 3.800e-89
Identity = 177/323 (54.80%), Postives = 238/323 (73.68%), Query Frame = 0
Query:  110 LSKELXXXXXXXXXXXXXXKHRADVRFLEDTAKGDPDPEMAAMAKEDVASARNAVVALEERVLRRLLPKDAGDDDRGVILEVRAGTGGDEASLFAGEVFGMYERFAAAQKWRFEILSASKNEFGGLKEAAAAVQGHLAYPALKFESGVHRVQRVPVNDS--RLHTSAATVAVLPEPQEVDFKLDTRDLKFDVYRASGAGGQHVNTTESAVRVTHVPSGIVVAIQDERSQHKNKDKAIKILRARVYEREQAKVMAAQASTRKSQVGSGDRSERIRTYNFAQDRVTDHRISLSKHGIDRMMGGELLKEFSEALQSAEEAEKLRQL 431
            +SKE               + RAD+  L   A+ + DPEM  +A++++  A  A+ ALE +V+  LLPKDA  DD+  +LEVRAGTGGDEA+LFA  +F MY R+AA Q WRFE++  S+   GG KEA A++ G   +  LKFESGVHRVQRVP  ++  R+HTSAATVAVLPE +EVD ++D +DL+ DVYR+SG GGQ VNTT+SAVR+TH+P+G+VV  QDE+SQHKNK KA+++LR+R+Y+++++ + A +A+ RKSQVGSGDRSERIRTYNF Q RVTDHRI+L+ + ID++M GE L E  EAL + +EAE+L +L
Sbjct:   39 MSKEFAELTPVAESIADLRRARADLAELARMAEAESDPEMRELAQDELVQAEKAMPALERQVMLALLPKDAA-DDKNAMLEVRAGTGGDEAALFAANLFDMYRRYAAIQGWRFEVMDISETGLGGYKEAIASISGRGVFRRLKFESGVHRVQRVPATETQGRIHTSAATVAVLPEAEEVDIQIDDKDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGLVVIQQDEKSQHKNKAKALRVLRSRLYDQQRSALDAERAANRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKIDKVMAGEALDEVVEALIAQDEAERLAEL 360          
BLAST of NO03G01150 vs. NCBI_GenBank
Match: WP_102112977.1 (peptide chain release factor 1 [Niveispirillum cyanobacteriorum] >AUN31371.1 peptide chain release factor 1 [Niveispirillum cyanobacteriorum])

HSP 1 Score: 333.2 bits (853), Expect = 1.200e-87
Identity = 182/302 (60.26%), Postives = 231/302 (76.49%), Query Frame = 0
Query:  132 ADVRFLEDTAKGDPDPEMAAMAKEDVASARNAVVALEERVLRRLLPKDAGDDDRGVILEVRAGTGGDEASLFAGEVFGMYERFAAAQKWRFEILSASKNEFGGLKEAAAAVQGHLAYPALKFESGVHRVQRVPVNDS--RLHTSAATVAVLPEPQEVDFKLDTRDLKFDVYRASGAGGQHVNTTESAVRVTHVPSGIVVAIQDERSQHKNKDKAIKILRARVYEREQAKVMAAQASTRKSQVGSGDRSERIRTYNFAQDRVTDHRISLSKHG-IDRMMGGELLKEFSEALQSAEEAEKLRQL 431
            AD+  LE  A GD D EM  +A E++A AR  +  LE R+L  LLPKD   D+R  ILEVRAGTGGDEA+LFA E+F MY+R+AA+Q WRFE +  S+   GG KEA+A + G   +  LKFESGVHRVQRVP  ++  R+HTSAATVAVLPE +EVD  +D RDL+ DV+R+SG GGQ VNTT+SAVR+TH+P+GIVV+ QDE+SQHKNK KA+K+LRAR+YE E+ ++ + +A+ RKSQVGSGDRSERIRTYNF Q R+TDHRI+L+ +G IDR M GE + E  +AL + EEAE+L +L
Sbjct:   61 ADMAELEAMAAGD-DEEMRDLAVEELAEARRRLPELERRILLALLPKDEA-DERNAILEVRAGTGGDEAALFAAELFEMYKRYAASQGWRFETMDVSETGIGGYKEASATITGRSVFRRLKFESGVHRVQRVPATETQGRIHTSAATVAVLPEAEEVDIHIDERDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSQQDEKSQHKNKAKALKVLRARLYEAERQRLASERAADRKSQVGSGDRSERIRTYNFPQGRITDHRINLTLYGKIDRFMTGE-MDEVIDALIAQEEAERLAEL 359          
BLAST of NO03G01150 vs. NCBI_GenBank
Match: WP_040844407.1 (peptide chain release factor 1 [Nitrospirillum amazonense])

HSP 1 Score: 332.4 bits (851), Expect = 2.100e-87
Identity = 174/323 (53.87%), Postives = 237/323 (73.37%), Query Frame = 0
Query:  110 LSKELXXXXXXXXXXXXXXKHRADVRFLEDTAKGDPDPEMAAMAKEDVASARNAVVALEERVLRRLLPKDAGDDDRGVILEVRAGTGGDEASLFAGEVFGMYERFAAAQKWRFEILSASKNEFGGLKEAAAAVQGHLAYPALKFESGVHRVQRVPVNDS--RLHTSAATVAVLPEPQEVDFKLDTRDLKFDVYRASGAGGQHVNTTESAVRVTHVPSGIVVAIQDERSQHKNKDKAIKILRARVYEREQAKVMAAQASTRKSQVGSGDRSERIRTYNFAQDRVTDHRISLSKHGIDRMMGGELLKEFSEALQSAEEAEKLRQL 431
            +SKE               + R+++  L   A+ + DPEM  +A+E++  A  A+  LE +V+  LLPKDA  DD+  +LEVRAGTGGDEA+LFA  +F MY R+AA Q WRFE++  S+   GG KEA A++ G   +  LKFESGVHRVQRVP  ++  R+HTSAATVAVLPE +EVD ++D +DL+ DV+R+SG GGQ VNTT+SAVR+TH+P+G+VV+ QDE+SQHKNK KA+++LR+R+Y+ +++ + A +A+ RKSQVGSGDRSERIRTYNF Q RVTDHRI+L+ + ID++M GE L E  EAL + +EAE+L +L
Sbjct:   39 MSKEFAELTPVAESIADLRRARSNLAELARMAEAEADPEMRELAQEELIQAEKALPGLERQVMLALLPKDAA-DDKNAMLEVRAGTGGDEAALFAANLFDMYRRYAAIQGWRFEVIEISETGLGGYKEAIASISGRGVFRRLKFESGVHRVQRVPATETQGRIHTSAATVAVLPEAEEVDIQIDEKDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGLVVSQQDEKSQHKNKAKALRVLRSRLYDLQRSALDAERAANRKSQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKIDKVMAGEALDEVVEALIAQDEAERLAEL 360          
The following BLAST results are available for this feature:
BLAST of NO03G01150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29586.13.000e-15072.22peptide chain release factor 1 [Nannochloropsis ga... [more]
AMK98482.16.600e-14271.80mitochondrial peptide chain release factor 1 [Mono... [more]
AMK98478.19.900e-12263.28mitochondrial peptide chain release factor 1 [Visc... [more]
AMK98476.15.500e-11259.10mitochondrial peptide chain release factor 1 [Trac... [more]
WP_088153088.11.300e-8953.72peptide chain release factor 1 [Inquilinus limosus... [more]
WP_026873170.12.200e-8953.72peptide chain release factor 1 [Inquilinus limosus... [more]
WP_034847139.12.900e-8953.44peptide chain release factor 1 [Inquilinus limosus... [more]
WP_044564286.13.800e-8954.80peptide chain release factor 1 [Azospirillum sp. B... [more]
WP_102112977.11.200e-8760.26peptide chain release factor 1 [Niveispirillum cya... [more]
WP_040844407.12.100e-8753.87peptide chain release factor 1 [Nitrospirillum ama... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL070nonsL070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR053ngnoR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005802NSK005802Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G01150.1NO03G01150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|571614gene_1288Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100006g47gene1079Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G01150.1NO03G01150.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G01150 ID=NO03G01150|Name=NO03G01150|organism=Nannochloropsis oceanica|type=gene|length=1745bp
CCTTTCGCGCCCTCTGGATGGAGCTGTAGACCGCACAACTTAAGACCCTA
ACGACACGAAAGCAACAGACTGATTTCAAATAAGCGATTTAACAACAGAT
ATGAGAGAGTCAATGCGGTGTGGATATCATGCTGGCGCTTTATATGTCAC
TTTAATTGATGGTGCGATCGGTACCGCGATCTGGGTCGCGGTTGGGGAGG
AGTGAGAGAGCGGGATGCTGCTTGTCGTCCCATCCAAGCGCCAACCGGGG
TATCCTTCCATTTCTAAGCCACACCAAACACGCAGCACAGGGCACACAGC
TTGTTGATTAGGAGAAGAACGCTGTAGCTATGCAGCGCATGGTACGGATC
GGCTGTTGTGCCACCAACAGACAAGCAACGGCAAGAACCGCCAATACTTG
CACCTCCCCACCCTCCACTACCAGCACGCGGCGACGACCCCTGTTACACG
CATCATCGCTATTAAGAGCACCGCGACGGCCCCTCTCAACCTTTACGCCA
GCAGTCTTGACCAGGTTGGATCAGATGCGCGTGCGCCATGCTCAGGTGGA
GGATGAGTTAAATAGTCTGCATACAGCTGCCTCTGCGGACGGCAGTGGGC
AACCGCAGCAGCAGTACCAGTCTGGCAGTCAATCGGCGGTGATGCGTTTG
GCGGCGTTGTCCAAAGAGCTCGCGGAGCTTTCGGAGCTTGTCGACCTGAT
TGAAGAGTTGGAAAAGCACCGTGCGGACGTTCGCTTCTTGGAGGACACGG
CAAAAGGAGACCCTGACCCCGAAATGGCAGCCATGGCCAAGGAAGACGTG
GCCAGCGCCCGCAACGCCGTGGTGGCGCTTGAGGAGAGGGTGCTACGACG
ACTGTTGCCGAAGGATGCCGGAGATGATGACCGGGGTGTAATTTTGGAGG
TGCGGGCGGGAACGGGAGGGGATGAGGCGTCATTGTTTGCCGGCGAGGTC
TTTGGCATGTACGAACGCTTTGCCGCCGCACAGAAGTGGCGTTTTGAAAT
TTTGAGTGCGTCCAAGAATGAATTTGGGGGGTTGAAGGAAGCGGCTGCGG
CTGTTCAAGGTCATTTAGCGTACCCTGCGCTCAAGTTTGAGAGTGGCGTG
CATCGTGTGCAACGTGTGCCGGTGAACGACAGCCGGCTCCATACCTCGGC
GGCAACAGTTGCCGTGCTGCCCGAGCCTCAAGAGGTGGACTTTAAATTGG
ATACACGTGATCTCAAATTTGATGTTTATCGCGCAAGTGGTGCAGGGGGC
CAGCATGTCAACACCACTGAAAGCGCCGTCCGCGTCACGCACGTGCCCTC
AGGCATCGTCGTCGCTATCCAAGACGAGCGGTCACAACATAAAAACAAGG
ACAAAGCCATTAAAATTCTGCGTGCGCGGGTCTACGAGAGAGAGCAAGCC
AAGGTTATGGCTGCACAAGCCTCGACACGTAAATCGCAGGTGGGGTCGGG
GGATCGATCGGAGCGCATTCGAACGTATAATTTTGCGCAGGACCGAGTGA
CGGACCACAGGATTAGTTTGAGCAAACATGGCATAGATAGGATGATGGGA
GGGGAATTACTCAAAGAATTCAGTGAGGCGCTGCAGAGCGCGGAGGAGGC
GGAGAAACTTAGGCAATTACTGAAAGGGGAGGTCTGAAGAAATGAAGGAG
AGAATTACGGACATGAAAAGAAAAGTACACACAACAATTTGTAGGATTAA
AATAGAAGAATCAAATACTAAGCACCAAGATAAGAAACAGAGACG
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protein sequence of NO03G01150.1

>NO03G01150.1-protein ID=NO03G01150.1-protein|Name=NO03G01150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=436bp
MQRMVRIGCCATNRQATARTANTCTSPPSTTSTRRRPLLHASSLLRAPRR
PLSTFTPAVLTRLDQMRVRHAQVEDELNSLHTAASADGSGQPQQQYQSGS
QSAVMRLAALSKELAELSELVDLIEELEKHRADVRFLEDTAKGDPDPEMA
AMAKEDVASARNAVVALEERVLRRLLPKDAGDDDRGVILEVRAGTGGDEA
SLFAGEVFGMYERFAAAQKWRFEILSASKNEFGGLKEAAAAVQGHLAYPA
LKFESGVHRVQRVPVNDSRLHTSAATVAVLPEPQEVDFKLDTRDLKFDVY
RASGAGGQHVNTTESAVRVTHVPSGIVVAIQDERSQHKNKDKAIKILRAR
VYEREQAKVMAAQASTRKSQVGSGDRSERIRTYNFAQDRVTDHRISLSKH
GIDRMMGGELLKEFSEALQSAEEAEKLRQLLKGEV*
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Synonyms
Publications