NO03G01120, NO03G01120 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G01120 vs. NCBI_GenBank
Match: EWM29546.1 (myb dna binding protein transcription factor-like protein [Nannochloropsis gaditana]) HSP 1 Score: 257.3 bits (656), Expect = 5.100e-65 Identity = 137/186 (73.66%), Postives = 152/186 (81.72%), Query Frame = 0 Query: 75 NKDGEGRSSGRIRSSGDNDSTRIGPSGSLSTTANTXXXXXXXXXXXXXXXXAP--DRWRSQKMAEDYINLVGDLMYPKVGFGPYGYDAVKGEIPLERPNTLGAIMCPVRRRTVIEHWSPFEVACFEGAIMLVGKNFYEIAKLLRSKSTKDCIEFYYVWKMTSHYQQWKRGFEPLDPHPFSILPQDD 259 +K+ GRSS RI++S + D XXXXXXXXXXXXXXX +RWR+Q+MAEDY+NLVGDLMYPKV FGPYGYD KGEIPLERPNTLG +MCP RRRTV+EHWSPFEVACFEGAI+LVGKNFYEI+KLL SKSTK+CIEFYYVWKMTSHYQQWKR FEPLDPHPFSILP D+ Sbjct: 71 DKESVGRSSARIKNSAERDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGKPVERWRAQRMAEDYVNLVGDLMYPKVSFGPYGYDMAKGEIPLERPNTLGVLMCPARRRTVMEHWSPFEVACFEGAIVLVGKNFYEISKLLPSKSTKECIEFYYVWKMTSHYQQWKRSFEPLDPHPFSILPPDE 256
BLAST of NO03G01120 vs. NCBI_GenBank
Match: CBJ29293.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 146.7 bits (369), Expect = 9.700e-32 Identity = 61/115 (53.04%), Postives = 84/115 (73.04%), Query Frame = 0 Query: 129 RWRSQKMAEDYINLVGDLMYPKVGFGPYGYDAVKGEIPLERPNTLGAIMCPVRRRTVIEHWSPFEVACFEGAIMLVGKNFYEIAKLLRSKSTKDCIEFYYVWKMTSHYQQWKRGF 244 RWR+ +M EDY N+ G +MY V GP+GY++V+G P+ERP TLG I +RR TVIE WSP++VA FEGAI + GK F+++A+ + K+ D +EFYY+WK T+HY+QWK F Sbjct: 396 RWRTHRMVEDYTNVCGKIMYGHVRTGPFGYNSVEGRFPMERPTTLGMIKAGMRRPTVIERWSPYDVALFEGAISVHGKVFHKVAEEIEGKTVADVVEFYYMWKKTNHYKQWKSMF 510
BLAST of NO03G01120 vs. NCBI_GenBank
Match: XP_002176665.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51128.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 134.8 bits (338), Expect = 3.800e-28 Identity = 56/118 (47.46%), Postives = 81/118 (68.64%), Query Frame = 0 Query: 129 RWRSQKMAEDYINLVGDLM-YPKVGFGPYGYDAVKGEIPLERPNTLGAIMCPVRRRTVIEHWSPFEVACFEGAIMLVGKNFYEIAKLLRSKSTKDCIEFYYVWKMTSHYQQWKRGFEP 246 RW++ ++ EDYI+ +M P GPYGYD + + PLE + L + P+RR TV+E WSP+E+A FEGA+ GK+FY I K +++KST++ I+FYYVWK TSHY+ WK+ + P Sbjct: 79 RWKAHQIVEDYIDFASHMMLLPTSQLGPYGYDTSRRQFPLETVSALAFVASPLRRPTVVERWSPYEIAIFEGAMAQYGKDFYHIHKFIKTKSTQEIIDFYYVWKKTSHYRLWKKTYIP 196
BLAST of NO03G01120 vs. NCBI_GenBank
Match: GAX15706.1 (hypothetical protein FisN_3Hh180 [Fistulifera solaris]) HSP 1 Score: 124.8 bits (312), Expect = 3.900e-25 Identity = 55/122 (45.08%), Postives = 79/122 (64.75%), Query Frame = 0 Query: 129 RWRSQKMAEDYINLVGDLMYPKVG-FGPYGYDAVKGEIPLERPNTLGAIMCPVRRRTVIEHWSPFEVACFEGAIMLVGKNFYEIAKLLRSKSTKDCIEFYYVWKMTSHYQQWKRGFEPLDPH 250 RW+ ++ E+Y++ +LM + FG YGYD K + PLE + LG + P+RR VIE WSP+E+A FE A++ GK F ++ + SK+TK+ IEFYY+WK TSHY WK+ + P PH Sbjct: 53 RWKVHRLTEEYVDFASNLMLTPISEFGSYGYDPNKLQFPLEAVSALGYLKSPLRRPLVIEKWSPYEIAVFEAALIQHGKQFEKVQSEIGSKTTKEVIEFYYMWKKTSHYSSWKKQYIP--PH 172
BLAST of NO03G01120 vs. NCBI_GenBank
Match: GAX15741.1 (hypothetical protein FisN_3Lh180 [Fistulifera solaris]) HSP 1 Score: 123.2 bits (308), Expect = 1.100e-24 Identity = 54/122 (44.26%), Postives = 78/122 (63.93%), Query Frame = 0 Query: 129 RWRSQKMAEDYINLVGDLMYPKVG-FGPYGYDAVKGEIPLERPNTLGAIMCPVRRRTVIEHWSPFEVACFEGAIMLVGKNFYEIAKLLRSKSTKDCIEFYYVWKMTSHYQQWKRGFEPLDPH 250 RW+ ++ E+Y++ +LM + G YGYD K + PLE + LG + P+RR VIE WSP+E+A FE A++ GK F ++ + SK+TK+ IEFYY+WK TSHY WK+ + P PH Sbjct: 52 RWKVHRLTEEYVDFASNLMLTPISELGSYGYDPSKLQFPLEAVSALGYLKSPMRRSLVIEKWSPYEIAVFEAALIQHGKQFEKVQSEIGSKTTKEVIEFYYMWKKTSHYSSWKKKYIP--PH 171
BLAST of NO03G01120 vs. NCBI_GenBank
Match: GBG33861.1 (Mesoderm induction early response protein 1 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 87.4 bits (215), Expect = 7.000e-14 Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 0 Query: 167 LERPNTLGAIMCPVRRRTVIEHWSPFEVACFEGAIMLVGKNFYEIAKLLRSKSTKDCIEFYYVWKMTSHYQQWKRGF 244 ++ N+LG ++ P+ R +V E W+P E+A FE I GKNF+ I K++RSK+T + I+FYYVWK T Y+ WKR + Sbjct: 148 IQHHNSLGRLVSPLYRPSVEEQWAPREIAIFEAGICAYGKNFHAIQKMIRSKTTCEVIDFYYVWKKTDSYKVWKRSY 224
BLAST of NO03G01120 vs. NCBI_GenBank
Match: ETO09978.1 (hypothetical protein RFI_27398 [Reticulomyxa filosa]) HSP 1 Score: 85.5 bits (210), Expect = 2.700e-13 Identity = 36/71 (50.70%), Postives = 50/71 (70.42%), Query Frame = 0 Query: 171 NTLGAIMCPVRRRTVIEHWSPFEVACFEGAIMLVGKNFYEIAKLLRSKSTKDCIEFYYVWKMTSHYQQWKR 242 +TL ++ P R+R+ I+ WS EVA FE A+ GKNFYEI+K++ +K K IEFYY WK ++HYQ WK+ Sbjct: 16 STLDVLLSPYRKRSPIDEWSAREVALFESAMCCKGKNFYEISKIIGTKCCKQVIEFYYFWKNSTHYQTWKQ 86
BLAST of NO03G01120 vs. NCBI_GenBank
Match: CEP00482.1 (hypothetical protein PBRA_001536 [Plasmodiophora brassicae]) HSP 1 Score: 82.8 bits (203), Expect = 1.700e-12 Identity = 30/70 (42.86%), Postives = 51/70 (72.86%), Query Frame = 0 Query: 171 NTLGAIMCPVRRRTVIEHWSPFEVACFEGAIMLVGKNFYEIAKLLRSKSTKDCIEFYYVWKMTSHYQQWK 241 +T+ A++ P+R+R++ E WSP ++A FE + +GK+F+ IAKL+ +K+T+D + YY WK ++HY WK Sbjct: 171 STIEALLSPLRKRSIWESWSPIQLAIFESGLCTLGKDFHAIAKLIENKTTRDVVNLYYHWKQSAHYHMWK 240
BLAST of NO03G01120 vs. NCBI_GenBank
Match: OAO12229.1 (MYB DNA binding protein/ transcription factor-like protein [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 79.7 bits (195), Expect = 1.500e-11 Identity = 33/72 (45.83%), Postives = 48/72 (66.67%), Query Frame = 0 Query: 169 RPNTLGAIMCPVRRRTVIEHWSPFEVACFEGAIMLVGKNFYEIAKLLRSKSTKDCIEFYYVWKMTSHYQQWK 241 R LG + + + +E WSP EV FE AI + GK+FY+I+K +++K+TK+ IEFYY WK +SHY W+ Sbjct: 226 RARLLGQVDSDLVPMSPLEKWSPHEVVVFEAAICVYGKDFYQISKAIKTKTTKEVIEFYYSWKFSSHYYSWR 297
BLAST of NO03G01120 vs. NCBI_GenBank
Match: CEM28293.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 79.0 bits (193), Expect = 2.500e-11 Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 0 Query: 181 RRRTVIEHWSPFEVACFEGAIMLVGKNFYEIAKLLRSKSTKDCIEFYYVWKMTSHYQQWK 241 R I+ W P EV FEGAI GK+F++IAKL+ +K+TK+CI+FYY+WK TS Y+ WK Sbjct: 329 RHSHTIDLWGPKEVMIFEGAICRYGKDFHKIAKLVETKTTKECIDFYYLWKKTSRYRHWK 388 The following BLAST results are available for this feature:
BLAST of NO03G01120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G01120 ID=NO03G01120|Name=NO03G01120|organism=Nannochloropsis oceanica|type=gene|length=1695bpback to top protein sequence of NO03G01120.1 >NO03G01120.1-protein ID=NO03G01120.1-protein|Name=NO03G01120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=260bpback to top Synonyms
Publications
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