NO03G00990, NO03G00990 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G00990 vs. NCBI_GenBank
Match: WP_084724963.1 (DUF2800 domain-containing protein [Streptacidiphilus melanogenes]) HSP 1 Score: 189.9 bits (481), Expect = 1.700e-44 Identity = 103/263 (39.16%), Postives = 147/263 (55.89%), Query Frame = 0 Query: 171 PISVSPSSLGDFKTCPRLYRFRHLERVPEPASEVMVRGSMVHDALDELFAQPPEKRNKDVLHDLFRSVW--LKKKDKYVKELFPT---VESQRAFGLAGLKLLSNYFKVETPADEEPVMREFRMKVPFPDGPSVTGILDRVDADKESGEWIVVDYKTGKAPALKYSPAVNERIIADKFFQLKIYALLLEQVKDRVPTRLKLIYL-DGPTVMSMKLQEGDLEEAREELLSLWKGIVDAWENDAFPAKPGKLCEWCSFKTICPAW 428 P+S+SPS DF TCP LYR R ++R+PEP S RG+++H L+ LF P +R D L R W L ++ V ELFP + A+ KLL +YF+VE P +P RE ++ G ++ G +DRVD +GE VVDYKTG+AP+ + FQ+K YAL++ + + VP RL+L+YL G ++S EGDL +L +LW+ I A E +PA P +LC+WC+ K++CPAW Sbjct: 83 PVSLSPSRASDFMTCPLLYRLRVIDRLPEPPSPAATRGTLIHAVLERLFDSPVGERTPDTARALLRPQWERLLEERPEVAELFPAESGAQELAAWLTDAEKLLESYFRVEDPNRLQPAERELLVQTTLESGLTLRGYVDRVDV-APTGEVRVVDYKTGRAPSRDFE--------GKAMFQMKFYALVIWRARGVVPKRLQLLYLGGGGQIVSYDPDEGDLLAVERKLQALWRAIQRALETGEWPASPNRLCDWCAHKSLCPAW 336
BLAST of NO03G00990 vs. NCBI_GenBank
Match: WP_051944348.1 (RecB family exonuclease [Streptacidiphilus rugosus]) HSP 1 Score: 184.9 bits (468), Expect = 5.600e-43 Identity = 105/266 (39.47%), Postives = 146/266 (54.89%), Query Frame = 0 Query: 168 VRLPISVSPSSLGDFKTCPRLYRFRHLERVPEPASEVMVRGSMVHDALDELFAQPPEKRNKDVLHDLFRSVW--LKKKDKYVKELFP--TVESQRAFGLA-GLKLLSNYFKVETPADEEPVMREFRMKVPFPDGPSVTGILDRVDADKESGEWIVVDYKTGKAPALKYSPAVNERIIADKFFQLKIYALLLEQVKDRVPTRLKLIYL-DGPTVMSMKLQEGDLEEAREELLSLWKGIVDAWENDAFPAKPGKLCEWCSFKTICPAW 428 V LP S+SPS GDF TCP LYR R ++R+PEP S +G++VH L+ LF P R D L R W L + ELFP T ++ A LA KLL YF++E P +P RE ++ G + G +DR+D +GE VVDYKTG+AP+ + FQ+K YAL++ + + +P RL+L+YL G ++S E DL +LL+LWK I A +PA P +LC+WC+ K++CPAW Sbjct: 28 VSLPSSLSPSRAGDFMTCPLLYRLRVIDRLPEPPSPAATKGTLVHAVLERLFDAPAGARTPDAARALLRPEWEKLLLERPEAAELFPADTDAAELASWLAEAEKLLDAYFRIEDPNRLQPAERELLVQTTLESGLLLRGYVDRIDV-APTGEVRVVDYKTGRAPSRDFE--------GKAMFQMKFYALVIWRERGVLPKRLQLVYLGGGGQIVSYDPDEADLLAVERKLLALWKAIQQALRTGEWPASPNRLCDWCAHKSLCPAW 284
BLAST of NO03G00990 vs. NCBI_GenBank
Match: WP_082015129.1 (RecB family exonuclease [Streptacidiphilus jiangxiensis] >SEM54387.1 putative RecB family exonuclease [Streptacidiphilus jiangxiensis]) HSP 1 Score: 184.9 bits (468), Expect = 5.600e-43 Identity = 102/266 (38.35%), Postives = 149/266 (56.02%), Query Frame = 0 Query: 171 PISVSPSSLGDFKTCPRLYRFRHLERVPEPASEVMVRGSMVHDALDELFAQPPEKRNKDVLHDLFRSVW--LKKKDKYVKELFP-----TVESQRAFGLAGL-KLLSNYFKVETPADEEPVMREFRMKVPFPDGPSVTGILDRVDADKESGEWIVVDYKTGKAPALKYSPAVNERIIADKFFQLKIYALLLEQVKDRVPTRLKLIYL-DGPTVMSMKLQEGDLEEAREELLSLWKGIVDAWENDAFPAKPGKLCEWCSFKTICPAW 428 P+S+SPS DF TCP LYR R ++++PEP S RG+++H L+ LF P R D L R W L ++ V ELFP T + A LAG +LL++YF++E P +P RE + G ++ G +DR+D +GE VVDYKTG+AP+ + FQ+K YAL++ + + +P RL+L+YL G V++ EGDL +L +LW+ I A E +PA P +LC+WC+ K++CPAW Sbjct: 51 PVSLSPSRASDFMTCPLLYRLRVIDKLPEPPSPAATRGTLIHSVLERLFDAPQGSRTPDAAKALLRPQWERLLEERPEVAELFPAEAGGTDAEELASWLAGAEQLLASYFRIEDPNRLQPAERELLVTTELESGLTLRGYVDRIDV-APTGEVRVVDYKTGRAPSRDFE--------GKAMFQMKFYALVIWRERGVLPKRLQLMYLGGGGQVVTYDPDEGDLLATERKLQALWQAIQRALETGEWPANPNRLCDWCAHKSLCPAW 307
BLAST of NO03G00990 vs. NCBI_GenBank
Match: WP_084728727.1 (DUF2800 domain-containing protein [Streptacidiphilus neutrinimicus]) HSP 1 Score: 184.1 bits (466), Expect = 9.500e-43 Identity = 100/262 (38.17%), Postives = 145/262 (55.34%), Query Frame = 0 Query: 172 ISVSPSSLGDFKTCPRLYRFRHLERVPEPASEVMVRGSMVHDALDELFAQPPEKRNKDVLHDLFRSVW--LKKKDKYVKELFPT---VESQRAFGLAGLKLLSNYFKVETPADEEPVMREFRMKVPFPDGPSVTGILDRVDADKESGEWIVVDYKTGKAPALKYSPAVNERIIADKFFQLKIYALLLEQVKDRVPTRLKLIYL-DGPTVMSMKLQEGDLEEAREELLSLWKGIVDAWENDAFPAKPGKLCEWCSFKTICPAW 428 +S+SPS DF TCP LYR R ++R+PEP S RG+++H L+ LF P +R D L R W L ++ V +LFP E A+ +LL +YF+VE P +P RE ++ G ++ G +DRVD +GE VVDYKTG+AP+ + FQ+K YAL++ + + VP RL+L+YL G ++S E DL +L +LW+ I A E +PA P +LC+WC+ K++CPAW Sbjct: 49 VSLSPSRASDFMTCPLLYRLRVIDRLPEPPSPAATRGTLIHSVLERLFDSPAGERTPDTARALLRPQWERLLEERPEVAQLFPAETGAEELAAWLADAEQLLESYFRVEDPNRLQPAERELLVQTTLESGLTLRGYVDRVDV-APTGEVRVVDYKTGRAPSRDFE--------GKAMFQMKFYALVIWRARGVVPKRLQLLYLGGGGQIVSYDPDEADLLAVERKLQALWRAIERALETGDWPASPNRLCDWCAHKSLCPAW 301
BLAST of NO03G00990 vs. NCBI_GenBank
Match: WP_084701917.1 (DUF2800 domain-containing protein [Streptacidiphilus anmyonensis]) HSP 1 Score: 180.6 bits (457), Expect = 1.100e-41 Identity = 99/260 (38.08%), Postives = 143/260 (55.00%), Query Frame = 0 Query: 174 VSPSSLGDFKTCPRLYRFRHLERVPEPASEVMVRGSMVHDALDELFAQPPEKRNKDVLHDLFRSVW--LKKKDKYVKELFPT---VESQRAFGLAGLKLLSNYFKVETPADEEPVMREFRMKVPFPDGPSVTGILDRVDADKESGEWIVVDYKTGKAPALKYSPAVNERIIADKFFQLKIYALLLEQVKDRVPTRLKLIYL-DGPTVMSMKLQEGDLEEAREELLSLWKGIVDAWENDAFPAKPGKLCEWCSFKTICPAW 428 +SPS DF TCP LYR R ++R+PEP S RG+++H L+ LF P +R D L R W L ++ V ELFP + A+ LL +YF+VE P +P RE ++ G ++ G +DR+D +GE VVDYKTG+AP+ + FQ+K YAL++ + + +P RL+L+YL G V+S EGDL +L +LW+ I A E +PA P +LC+WC+ K++CPAW Sbjct: 58 LSPSRASDFMTCPLLYRLRVIDRLPEPPSPAATRGTLIHAVLERLFDSPAGERTPDTARALLRPQWERLLEERPEVAELFPADTGAQELAAWLTDAETLLESYFRVEDPNRLQPAERELLVQTTLESGLTLRGYVDRIDV-APTGEVRVVDYKTGRAPSRDFE--------GKAMFQMKFYALVIWRERGVLPKRLQLLYLGGGGQVVSYDPDEGDLLAVERKLQALWRAIQRALETGEWPASPNRLCDWCAHKSLCPAW 308
BLAST of NO03G00990 vs. NCBI_GenBank
Match: WP_062073438.1 (RecB family exonuclease [Demequina sediminicola]) HSP 1 Score: 178.7 bits (452), Expect = 4.000e-41 Identity = 98/257 (38.13%), Postives = 144/257 (56.03%), Query Frame = 0 Query: 174 VSPSSLGDFKTCPRLYRFRHLERVPEPASEVMVRGSMVHDALDELFAQPPEKRNKDVLHDLFRSVW--LKKKDKYVKELFPTVESQRAFGLAGLKLLSNYFKVETPADEEPVMREFRMKVPFPDGPSVTGILDRVDADKESGEWIVVDYKTGKAPALKYSPAVNERIIADKFFQLKIYALLLEQVKDRVPTRLKLIYL-DGPTVMSMKLQEGDLEEAREELLSLWKGIVDAWENDAFPAKPGKLCEWCSFKTICPAW 428 +SPS GDF+ CP LYR R ++RVPEP S G++VH L+EL+ P +RN+D + +W +K KD + +L +++A+ G L YF +E P EP RE +++ PDGP + G +DRVD + G ++DYKTGK P +Y ER FQ+K YALL+E+++ R P L+L++L DG T++ E DL+ E+ LW I A F + KLC+WC F+ +CPA+ Sbjct: 1 MSPSRAGDFRQCPHLYRLRVIDRVPEPPSAAATLGTLVHSVLEELYDLPAHERNEDAATAMLSPLWDAMKVKDPTLADLHDDKAAEQAWLADGATRLRTYFTMENPQRLEPNAREEFVELQLPDGPLLRGFIDRVDVAPD-GSIRIIDYKTGKTPRPQYGQ--KER------FQMKFYALLVERLRGRRPAILQLLFLKDGGTLVLRPTAE-DLDLVEHEIRELWNDITHAASTGQFRPQKSKLCDWCHFQELCPAF 247
BLAST of NO03G00990 vs. NCBI_GenBank
Match: WP_030260884.1 (RecB family exonuclease [Streptacidiphilus jeojiense]) HSP 1 Score: 178.3 bits (451), Expect = 5.200e-41 Identity = 102/263 (38.78%), Postives = 147/263 (55.89%), Query Frame = 0 Query: 171 PISVSPSSLGDFKTCPRLYRFRHLERVPEPASEVMVRGSMVHDALDELFAQPPEKRNKDVLHDLFRSVW--LKKKDKYVKELFP--TVESQRAFGLAGL-KLLSNYFKVETPADEEPVMREFRMKVPFPDGPSVTGILDRVDADKESGEWIVVDYKTGKAPALKYSPAVNERIIADKFFQLKIYALLLEQVKDRVPTRLKLIYL-DGPTVMSMKLQEGDLEEAREELLSLWKGIVDAWENDAFPAKPGKLCEWCSFKTICPAW 428 P+++SPS GDF TCP LYR R +++VPEP S RG++VH L+ LF P +R + L R W L +K + LFP S+ A LA KL+ +F++E P EP RE ++ G + G +DRVD +GE VVDYKTG+AP+ + FQ+K YAL+L +++ VP RL+L+YL G V++ DL +LL+LW+ I A E +PA +LC+WCSF+++CPA+ Sbjct: 16 PVALSPSRAGDFMTCPLLYRLRVIDKVPEPPSAAATRGTVVHAVLERLFDAPAAQRTPEAARALLRPEWERLLEKRPELGTLFPDDADGSELAGWLADAEKLVDGWFRLEDPTRLEPAERELYVETQLESGLRLRGYIDRVDV-APTGEVRVVDYKTGRAPSRDFE--------GKAMFQMKFYALVLWRLRGVVPRRLQLVYLGGGGQVVTYDPDPADLRAVERKLLALWQAIQRALETGEWPANRNRLCDWCSFQSLCPAF 269
BLAST of NO03G00990 vs. NCBI_GenBank
Match: WP_092108297.1 (PD-(D/E)XK nuclease family protein [Brevibacterium sandarakinum] >SDT15404.1 putative RecB family exonuclease [Brevibacterium sandarakinum]) HSP 1 Score: 178.3 bits (451), Expect = 5.200e-41 Identity = 96/258 (37.21%), Postives = 138/258 (53.49%), Query Frame = 0 Query: 172 ISVSPSSLGDFKTCPRLYRFRHLERVPEPASEVMVRGSMVHDALDELFAQPPEKRNKDVLHDLFRSVW--LKKKDKYVKELFPTVESQRAFGLAGLKLLSNYFKVETPADEEPVMREFRMKVPFPDGPSVTGILDRVDADKESGEWIVVDYKTGKAPALKYSPAVNERIIADKFFQLKIYALLLEQVKDRVPTRLKLIYLDGPTVMSMKLQEGDLEEAREELLSLWKGIVDAWENDAFPAKPGKLCEWCSFKTICPAW 428 IS+SPS DF CP +RFR ++++PEP S+ RG++VH L++LFA P +R +DV L R W L +KD V +F Q F KLL YF +E P EP E ++ +G + G +DRVD GE +VDYKTGK P +Y N FQ+ YAL+ ++ + L+L+YL +++ GD+E + E+ S+WK I+ + E D + K LC WC+FK +CPAW Sbjct: 5 ISLSPSRANDFVQCPLKFRFRSIDKLPEPPSQAAFRGTVVHSVLEKLFALPAAQRTQDVAESLLRPSWNELVEKDPDVLAIFDDEREQETFFTTAGKLLRAYFTLEFPEHLEPDQTEKYVRTQLDNGLELRGFIDRVDV-APGGEKRLVDYKTGKQPKPQYGREAN--------FQMGFYALVEYRLTGELVHTLQLMYLGSQSILKSHPTMGDIERTQFEIESIWKDIIASAEADRWRPKKSPLCNWCTFKPLCPAW 253
BLAST of NO03G00990 vs. NCBI_GenBank
Match: PHX75740.1 (hypothetical protein CK545_03520 [Actinobacteria bacterium]) HSP 1 Score: 178.3 bits (451), Expect = 5.200e-41 Identity = 91/256 (35.55%), Postives = 148/256 (57.81%), Query Frame = 0 Query: 172 ISVSPSSLGDFKTCPRLYRFRHLERVPEPASEVMVRGSMVHDALDELFAQPPEKRNKDVLHDLFRSVW--LKKKDKYVKELFPTVESQRAFGLAGLKLLSNYFKVETPADEEPVMREFRMKVPFPDGPSVTGILDRVDADKESGEWIVVDYKTGKAPALKYSPAVNERIIADKFFQLKIYALLLEQVKDRVPTRLKLIYLDGPTVMSMKLQEGDLEEAREELLSLWKGIVDAWENDAFPAKPGKLCEWCSFKTICP 426 + +SPS DF+ CP L+RFR ++++PEP S VRG++VH L+ L+ P +R ++L+R + + + +KY +ELF +E + L LL YF +E P EP RE ++ DG + G +DR+D SGE +VDYKTGK+P Y FFQL+ YAL++ + ++ VP +L+LIYL ++ E DL ++++++WK + A+++ FP K KLC+WC+++++CP Sbjct: 5 VKLSPSRANDFQNCPLLFRFRTIDQLPEPLSIDAVRGTIVHTTLEHLYDLPAIERQLPQAYELWREAFTEISQNEKY-RELFDAIEDISVWSNESLFLLDKYFALEEPVLLEPSERESHIEFDLQDGFKIHGYVDRIDV-APSGEIRIVDYKTGKSPREGYEQKA--------FFQLRFYALIIWRTRNIVPRKLRLIYLGDGRILEDSPTENDLIATEKKIVAIWKAMEAAFDSKNFPPKKSKLCDWCAYQSLCP 250
BLAST of NO03G00990 vs. NCBI_GenBank
Match: WP_079127441.1 (PD-(D/E)XK nuclease family protein [Streptomyces sp. TP-A0874]) HSP 1 Score: 177.2 bits (448), Expect = 1.200e-40 Identity = 101/268 (37.69%), Postives = 144/268 (53.73%), Query Frame = 0 Query: 171 PISVSPSSLGDFKTCPRLYRFRHLERVPEPASEVMVRGSMVHDALDELFAQPPEKRNKDVLHDLFRSVW--LKKKDKYVKELFP---------TVESQRAFGLAG--LKLLSNYFKVETPADEEPVMREFRMKVPFPDGPSVTGILDRVDADKESGEWIVVDYKTGKAPALKYSPAVNERIIADKFFQLKIYALLLEQVKDRVPTRLKLIYLDGPTVMSMKLQEGDLEEAREELLSLWKGIVDAWENDAFPAKPGKLCEWCSFKTICP 426 P S+SPS DF TCP LYRFR ++R+PE SE +RG++VH L+ LF P +R L S W L + ELF T ++QR G +L+ +F +E PA EP RE ++ G + GI+DRVD GE +VDYKTGKAP +Y+ FQ+K YAL+L +++ VP RL+L+YL V++ +E +L +LL+LW+ I A E+ + +PGKLC+WC + +CP Sbjct: 25 PRSLSPSRAADFMTCPLLYRFRVIDRLPEKPSEAAIRGTLVHAVLERLFDAPAAERTAPRARSLVGSEWERLLSAKPELAELFAEETGDGTTGTADAQRLARWLGEAERLVERWFSLEDPARLEPAERELFVETTLESGLKLRGIIDRVDI-APGGEVRIVDYKTGKAPRPEYA--------QQALFQMKFYALVLWRLRGAVPRRLQLVYLGSGDVLTYDPEESELRSVERKLLALWEAIRRATESGDWRPRPGKLCQWCDHQAVCP 283 The following BLAST results are available for this feature:
BLAST of NO03G00990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00990 ID=NO03G00990|Name=NO03G00990|organism=Nannochloropsis oceanica|type=gene|length=2570bpback to top protein sequence of NO03G00990.1 >NO03G00990.1-protein ID=NO03G00990.1-protein|Name=NO03G00990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=451bpback to top Synonyms
Publications
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