NO03G00940, NO03G00940 (gene) Nannochloropsis oceanica

Overview
NameNO03G00940
Unique NameNO03G00940
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1305
Alignment locationchr3:307039..308343 -

Link to JBrowse

Properties
Property NameValue
DescriptionS-adenosyl-L-methionine-dependent methyltransferase-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:307039..308343 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
GO:0016740transferase activity
GO:0008168methyltransferase activity
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR024160BIN3_SAM-bd_dom
IPR010675Bin3
Vocabulary: Biological Process
TermDefinition
GO:0032259methylation
Homology
[Close]
BLAST of NO03G00940 vs. NCBI_GenBank
Match: XP_016382431.1 (PREDICTED: 7SK snRNA methylphosphate capping enzyme-like [Sinocyclocheilus rhinocerous] >XP_016382433.1 PREDICTED: 7SK snRNA methylphosphate capping enzyme-like [Sinocyclocheilus rhinocerous])

HSP 1 Score: 136.0 bits (341), Expect = 2.900e-28
Identity = 98/340 (28.82%), Postives = 140/340 (41.18%), Query Frame = 0 
Query:   84 PVPSPPSFSSKLWQRHAHGSYRSYYGARRQASSTDIASAAAIIPSTIHLPPASRSNPPTDARLSLLQPEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEKLAWASRREGGRNDIEKWVEFRCQDFVGRRMLKRRRWKGDGQECIGGAAAEEDGGVDWKDVRIKGWKEYGTSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTE-------KYDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILEPQAWRTYRKRRHASVESRKNYTLLRLRP-PFKDVLMNEVGFESVEDLGIPLNAPVGYRRPMYCFVK 416
            P P       K  +   +GSY  YYG R                           +P  D RL++ +PEWF GK  LD+G +TG V   I  Y+ P RV+GVDID  L+R+A++ L +                     F+           G+G E  G        G++ +  R +  + +  S +                                   E       +YD+I C S+TK +HL  GDA ++RL HR++  L PGG  ILEPQ W  Y +R+  +    +NY  +RL+P  F   L  EVGF S E +G P +A  G +R +Y F K
Sbjct:  300 PPPGVEKAPHKTPRTFQYGSYSRYYGYR-------------------------TPSPSADPRLAVFRPEWFRGKKVLDVGCSTGHVTLAIAGYWSPERVLGVDIDGALVRIARQNLRY---------------------FLSEMTGSSGGPPGEGSEVRGQMGLAPLMGLELE--RGQALRRFPVSFTRCRGPIAAPTIMPHSPGLFPGNVYFLKGDYVPDSDEAVMSQCAEYDVILCLSLTKWVHLNYGDAGIQRLFHRIYRHLLPGGVLILEPQPWTCYSRRKRLTEVMYRNYRSIRLKPDQFSSFLTAEVGFSSYELIGTPHSAANGLQRSIYLFHK 591
[Close]
BLAST of NO03G00940 vs. NCBI_GenBank
Match: XP_007882819.1 (PREDICTED: LOW QUALITY PROTEIN: 7SK snRNA methylphosphate capping enzyme [Callorhinchus milii])

HSP 1 Score: 135.6 bits (340), Expect = 3.700e-28
Identity = 101/345 (29.28%), Postives = 151/345 (43.77%), Query Frame = 0 
Query:   89 PSFSSKLWQRHAHGSYRSYYGARRQASSTDIASAAAIIPSTIHLPPASRSNPPTDARLSLLQPEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEKLAWASRREGGRNDIEKWVEFRCQDFVGRRMLKR--RRWKGDGQECIGGAAAE----EDGGVDWKD--VRIKGWKEYGTSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEKYDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILEPQAWRTYRKRRHASVESRKNYTLLRLRPP--FKDVLMNEVGFESVEDLGIPLNAPVGYRRPMYCFVKRREEAEES 424
            P+F SK  ++  +G+Y  YYG R                               D RL +L+P WF+GKD LD+G N+G V   I  + KP R+VG+DID  L+  A++ +                  F  QD +  R   +  R++     +C G  AA     +  G ++ +  V  +G     T E                                     +YD+I C S+TK +HL  GD  L+R+  R++  LRPGG F+LEPQ W +Y KRR  +    +NY  + L+P      +L +EVGF S E +G PL+   G++RP+Y F K R  +  +
Sbjct:  380 PNFKSK-QKKFQYGNYSKYYGYRNPGRG-------------------------EDPRLCVLKPHWFSGKDVLDLGCNSGHVTLSIAKHLKPSRIVGLDIDGALVHTARQNIR----------------HFLSQDLLPPRGPGQAPRQFPLSLTKCKGPIAAPPVCLDASGPEFPNNVVFFQGNYVLETDE------------------------------LLDTQKPEYDVILCLSLTKWVHLNWGDEGLKRMFKRIYRHLRPGGIFLLEPQPWSSYGKRRKLTETIYRNYFKISLKPEQFTSFLLSSEVGFCSYELVGTPLSTSKGFQRPVYLFHKSRPSSSSN 652
[Close]
BLAST of NO03G00940 vs. NCBI_GenBank
Match: XP_017316072.1 (PREDICTED: 7SK snRNA methylphosphate capping enzyme-like [Ictalurus punctatus] >XP_017316073.1 PREDICTED: 7SK snRNA methylphosphate capping enzyme-like [Ictalurus punctatus] >XP_017316074.1 PREDICTED: 7SK snRNA methylphosphate capping enzyme-like [Ictalurus punctatus])

HSP 1 Score: 135.6 bits (340), Expect = 3.700e-28
Identity = 100/331 (30.21%), Postives = 136/331 (41.09%), Query Frame = 0 
Query:  101 HGSYRSYYGARRQASSTDIASAAAIIPSTIHLPPASRSNPPTDARLSLLQPEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEKL--------AWASRREGGRNDIEKWVEFRCQDFVGRRMLKRRRWKGDGQECIGG-------AAAEEDGGVDWKDVRIKGWKEYGTSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEKYDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILEPQAWRTYRKRRHASVESRKNYTLLRLRP-PFKDVLMNEVGFESVEDLGIPLNAPVGYRRPMYCFVK 416
            +G+Y  YYG R               P  I            DAR+ + +PEWF GK+ LD+G NTG +   I     P R+VG+DID  LI  AK+ +           +R+E  RN++E                              G         +E   G     V +   +    +                                     E++D+I C SVTK IHL  GD  LRR  HRV+  LRPGG FILEPQ W +Y KR+  +    KNY  ++L+P  F   L +EVGF S E LG P ++  G++RP+Y F K
Sbjct:  382 YGNYNQYYGYRN--------------PGAIE-----------DARIHVFKPEWFRGKEVLDLGCNTGHMTLTIAKNCCPARIVGLDIDGALIHAAKQNIRHYLSEVHTLQARKE--RNEVEXXXXXXXXXXXXXXXXXXXXXXXXXGSVEDGENKTDRIRESESSNGNRLFPVSLCVSRGPIAAPPLPDMPTLPPGNFPSNVTFVRGNYVLDSDVLLETQREEFDVILCLSVTKWIHLNWGDVGLRRFFHRVYRHLRPGGLFILEPQPWNSYSKRKKLTEAIYKNYFSIQLKPEQFSSFLTSEVGFSSYELLGTPNSSSRGFQRPIYLFHK 685
[Close]
BLAST of NO03G00940 vs. NCBI_GenBank
Match: XP_008876465.1 (hypothetical protein H310_11531 [Aphanomyces invadans] >ETV94874.1 hypothetical protein H310_11531 [Aphanomyces invadans])

HSP 1 Score: 135.2 bits (339), Expect = 4.900e-28
Identity = 84/276 (30.43%), Postives = 129/276 (46.74%), Query Frame = 0 
Query:  143 DARLSLLQPEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEKLAWASRREGGRNDIEKWVEFRCQDFVGRRMLKRRRWKGDGQECIGGAAAEEDGGVDWKDVRI--KGWKEYGTSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEKYDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILEPQAWRTYRKRRHASVESRKNYTLLRLRP-PFKDVLMNEVGFESVEDLGIPLNAPVGYRRPMYCFVK 416
            D+RL+  + EWF GK  LDIG N+G +  EI   F P  ++G+D DP+LI  A+  L                     ++++ +  +     +   ++      A +D   D  D+ +  + WK   T  +                                   + YD+I+C SVTK +HL  GD  L++L H V+A L PGGRFILEPQ W++Y  R+H +  +  NY  + LRP  F++ L   VGF SVE L +   +  G++RP+Y + K
Sbjct:   64 DSRLTAFKKEWFEGKKALDIGCNSGDMTLEIARRFSPAFIMGIDADPDLITQARASL---------------------KEYISKLTVAEAFREVTREDPSSNTVASKDIDADDDDLPLSFRLWKP-PTHHASHDPLPNIGSFASGVRFPYNVVFKRENIVLDRHSGKDYDVITCLSVTKWVHLFHGDDGLKQLFHLVYALLMPGGRFILEPQKWKSYYNRKHTNATTLANYDRIALRPKDFQEYLCATVGFTSVELLKVCSTSTHGFKRPIYLYTK 317
[Close]
BLAST of NO03G00940 vs. NCBI_GenBank
Match: XP_008876466.1 (hypothetical protein, variant [Aphanomyces invadans] >ETV94875.1 hypothetical protein, variant [Aphanomyces invadans])

HSP 1 Score: 135.2 bits (339), Expect = 4.900e-28
Identity = 84/276 (30.43%), Postives = 129/276 (46.74%), Query Frame = 0 
Query:  143 DARLSLLQPEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEKLAWASRREGGRNDIEKWVEFRCQDFVGRRMLKRRRWKGDGQECIGGAAAEEDGGVDWKDVRI--KGWKEYGTSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEKYDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILEPQAWRTYRKRRHASVESRKNYTLLRLRP-PFKDVLMNEVGFESVEDLGIPLNAPVGYRRPMYCFVK 416
            D+RL+  + EWF GK  LDIG N+G +  EI   F P  ++G+D DP+LI  A+  L                     ++++ +  +     +   ++      A +D   D  D+ +  + WK   T  +                                   + YD+I+C SVTK +HL  GD  L++L H V+A L PGGRFILEPQ W++Y  R+H +  +  NY  + LRP  F++ L   VGF SVE L +   +  G++RP+Y + K
Sbjct:   46 DSRLTAFKKEWFEGKKALDIGCNSGDMTLEIARRFSPAFIMGIDADPDLITQARASL---------------------KEYISKLTVAEAFREVTREDPSSNTVASKDIDADDDDLPLSFRLWKP-PTHHASHDPLPNIGSFASGVRFPYNVVFKRENIVLDRHSGKDYDVITCLSVTKWVHLFHGDDGLKQLFHLVYALLMPGGRFILEPQKWKSYYNRKHTNATTLANYDRIALRPKDFQEYLCATVGFTSVELLKVCSTSTHGFKRPIYLYTK 299
[Close]
BLAST of NO03G00940 vs. NCBI_GenBank
Match: OQR93202.1 (hypothetical protein ACHHYP_02805 [Achlya hypogyna])

HSP 1 Score: 135.2 bits (339), Expect = 4.900e-28
Identity = 88/275 (32.00%), Postives = 125/275 (45.45%), Query Frame = 0 
Query:  143 DARLSLLQPEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEKLAWASRREGGRNDIEKWVEFRCQDFVGRRMLKRRRWKGDGQECIGGAAAEEDGGVDWK-DVRIKGWKEYGTSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEKYDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILEPQAWRTYRKRRHASVESRKNYTLLRLRP-PFKDVLMNEVGFESVEDLGIPLNAPVGYRRPMYCFVK 416
            D+RLS+ Q EWF GK  LDIG N+G    EI   F P  ++GVD D +LI  A+  L                     ++++ +  +         QE       EE    D +  +  + WK   +++                                    + YD+I+  SVTK IHL  GDA +++L H VHA L PGGRFILEPQ W++Y  R+H +  +R NY  + LRP  F   L+  VGF SV  L +   +  G+RRP+Y + K
Sbjct:   53 DSRLSIFQKEWFEGKKALDIGCNSGDFTLEIARRFAPAFIMGVDCDADLITQARASL---------------------KEYISKLAV---------QEAFREVQKEEGDDEDEELPLSFRLWKPPASTQPAVDPLPNIGSFASGVRFPYNVVFKRENIAMDVHTGKDYDVIT-LSVTKWIHLYHGDAGIKQLFHLVHALLMPGGRFILEPQKWKSYHNRKHTNETTRMNYESITLRPSDFSAYLLETVGFRSVTLLKVCSTSNHGFRRPVYLYQK 296
[Close]
BLAST of NO03G00940 vs. NCBI_GenBank
Match: XP_019728777.1 (PREDICTED: 7SK snRNA methylphosphate capping enzyme-like isoform X2 [Hippocampus comes] >XP_019728778.1 PREDICTED: 7SK snRNA methylphosphate capping enzyme-like isoform X2 [Hippocampus comes])

HSP 1 Score: 134.8 bits (338), Expect = 6.400e-28
Identity = 100/353 (28.33%), Postives = 144/353 (40.79%), Query Frame = 0 
Query:   97 QRHAHGSYRSYYGARRQASSTDIASAAAIIPSTIHLPPASRSNPPTDARLSLLQPEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEK----LAWASRREGGRNDIEKWVEFRCQDFVGRRMLKRRRWKGDGQECIGGAAAEEDGGVDWKDVRIKGWKEYGTSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEK-----------------------------YDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILEPQAWRTYRKRRHASVESRKNYTLLRLRP-PFKDVLMNEVGFESVEDLGIPLNAPVGYRRPMYCFVK 416
            ++  +G+Y  YYG R  +++                          D R+ + +PEWF GK  LD+G N+G +   I    +P R++G+DID  L+  A++     L+    +E  R   E      C    G       R  GD  +   G A E DG       ++K  ++ G  E                                   T K                             YD+I C SVTK +HL  GD+ L+RL  RV+  L PGG FILEPQ W++Y KR+  +    +N+  +RL+P  F   L NEVGF S E LG P +   G++RP+Y F K
Sbjct:  377 KKFQYGNYNKYYGYRNPSAN-------------------------EDPRVHVFRPEWFEGKRVLDLGCNSGHLTLYIAKMLRPARILGLDIDNGLVHAARKNIRHYLSEMQTQEARRATQEG--NAGCD---GEERHTESRENGDTLKGESGLAEEADGKDSCGTEQVKAQRQDGKIEKMERVGSDQPGSCSFPLSLQISRGPIAAPPLTESSTAKPGEFPANVSFIKANYVLQNDNLLVTQRPEYDVILCMSVTKWVHLNWGDSGLKRLFKRVYRHLHPGGLFILEPQPWQSYIKRKKLTDTINRNFHSIRLKPDQFSSYLTNEVGFTSCEFLGTPKSLTRGFQRPIYLFHK 699
[Close]
BLAST of NO03G00940 vs. NCBI_GenBank
Match: XP_019728776.1 (PREDICTED: 7SK snRNA methylphosphate capping enzyme-like isoform X1 [Hippocampus comes])

HSP 1 Score: 134.8 bits (338), Expect = 6.400e-28
Identity = 100/353 (28.33%), Postives = 144/353 (40.79%), Query Frame = 0 
Query:   97 QRHAHGSYRSYYGARRQASSTDIASAAAIIPSTIHLPPASRSNPPTDARLSLLQPEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEK----LAWASRREGGRNDIEKWVEFRCQDFVGRRMLKRRRWKGDGQECIGGAAAEEDGGVDWKDVRIKGWKEYGTSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEK-----------------------------YDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILEPQAWRTYRKRRHASVESRKNYTLLRLRP-PFKDVLMNEVGFESVEDLGIPLNAPVGYRRPMYCFVK 416
            ++  +G+Y  YYG R  +++                          D R+ + +PEWF GK  LD+G N+G +   I    +P R++G+DID  L+  A++     L+    +E  R   E      C    G       R  GD  +   G A E DG       ++K  ++ G  E                                   T K                             YD+I C SVTK +HL  GD+ L+RL  RV+  L PGG FILEPQ W++Y KR+  +    +N+  +RL+P  F   L NEVGF S E LG P +   G++RP+Y F K
Sbjct:  404 KKFQYGNYNKYYGYRNPSAN-------------------------EDPRVHVFRPEWFEGKRVLDLGCNSGHLTLYIAKMLRPARILGLDIDNGLVHAARKNIRHYLSEMQTQEARRATQEG--NAGCD---GEERHTESRENGDTLKGESGLAEEADGKDSCGTEQVKAQRQDGKIEKMERVGSDQPGSCSFPLSLQISRGPIAAPPLTESSTAKPGEFPANVSFIKANYVLQNDNLLVTQRPEYDVILCMSVTKWVHLNWGDSGLKRLFKRVYRHLHPGGLFILEPQPWQSYIKRKKLTDTINRNFHSIRLKPDQFSSYLTNEVGFTSCEFLGTPKSLTRGFQRPIYLFHK 726
[Close]
BLAST of NO03G00940 vs. NCBI_GenBank
Match: XP_020385527.1 (LOW QUALITY PROTEIN: 7SK snRNA methylphosphate capping enzyme [Rhincodon typus])

HSP 1 Score: 134.0 bits (336), Expect = 1.100e-27
Identity = 98/331 (29.61%), Postives = 136/331 (41.09%), Query Frame = 0 
Query:   89 PSFSSKLWQRHAHGSYRSYYGARRQASSTDIASAAAIIPSTIHLPPASRSNPPTDARLSLLQPEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEKLAWASRREGGRNDIEKWVEFRCQDFVGRRMLKRRRWKGDGQECIGGAAAEEDGGVDWKDVRIKGWKEYGTSESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEKYDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILEPQAWRTYRKRRHASVESRKNYTLLRLRP-PFKDVLMN-EVGFESVEDLGIPLNAPVGYRRPMYCFVKRR 418
            P+F SK  +R  +G Y  YYG R                               D RLS  +PEWF GKD LD+G N G +   I    KP R+VG+DID  LI  A++ +                     + F+ + ML     +GDGQ                +   +   K  G   +                                    +YD++ C S+TK IHL  GD  L+R+  R++  LRPGG FILEPQ W +Y KRR  +    KNY  +  +P  F   L++ E+GF S E +G P +   G++RP+Y F K R
Sbjct:  344 PNFQSK-QKRFQYGXYTKYYGYRNPGRC-------------------------EDPRLSFFKPEWFQGKDILDLGCNAGHLTLSIAKDLKPSRIVGIDIDGSLIHTARQNI---------------------RHFLSQDMLPS---QGDGQV--------------KRRFPLSLTKCKGPIAAPPVAVDRCVAEFPNNVTFIQGNYVLEKDELLQTQRPEYDVVLCLSLTKWIHLNWGDEGLKRMFKRIYRHLRPGGIFILEPQPWSSYGKRRKITETIYKNYYKIIFKPDQFTSYLLSPEIGFSSYELVGTPQSTSKGFQRPVYLFHKGR 610
[Close]
BLAST of NO03G00940 vs. NCBI_GenBank
Match: XP_006764772.2 (PREDICTED: 7SK snRNA methylphosphate capping enzyme [Myotis davidii])

HSP 1 Score: 133.7 bits (335), Expect = 1.400e-27
Identity = 100/341 (29.33%), Postives = 145/341 (42.52%), Query Frame = 0 
Query:   86 PSPPSFSSKLWQRHAHGSYRSYYGARRQASSTDIASAAAIIPSTIHLPPASRSNPPTDARLSLLQPEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEKLAWASRREGGRNDIEKWVEFRCQDFVGRRMLKRRRWKGDGQECIGGAAAEEDGGVDWKDVRIKGWKEYGTSES-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTEKYDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILEPQAWRTYRKRRHASVESRKNYTLLRLRP-PFKDVLMN-EVGFESVEDLGIPLNAPVGYRRPMYCFVKRR 418
            P P +   K  ++  +G+Y  YYG R  +                            D RL +L+PEWF G+D LD+G N G V   I   + P R+VG+DID +LI  A++ +         R+ + +  E R Q                 Q   G A AE + G+  K VR +       + S                                         T +YD++ C S+TK +HL  GD  L+R+  R++  LRPGG  ILEPQ W TY KR+  +  + KNY  ++L+P  F   L + EVGF S E +  P +   G++RP+Y F K R
Sbjct:  392 PLPAAGFKKQQRKFQYGNYCKYYGYRNPSCE--------------------------DGRLRVLKPEWFKGRDVLDLGCNVGHVTLSIACKWGPSRMVGLDIDAQLIHSARQNI---------RHYLSE--ELRLQP----------------QTAEGDAGAESEEGI--KTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDELVDAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILILEPQPWSTYAKRKTLTETTYKNYYRIQLKPEQFSSYLTSPEVGFSSYELVATPHSTFKGFQRPVYLFHKAR 677
The following BLAST results are available for this feature:
BLAST of NO03G00940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_016382431.12.900e-2828.82PREDICTED: 7SK snRNA methylphosphate capping enzym... [more]
XP_007882819.13.700e-2829.28PREDICTED: LOW QUALITY PROTEIN: 7SK snRNA methylph... [more]
XP_017316072.13.700e-2830.21PREDICTED: 7SK snRNA methylphosphate capping enzym... [more]
XP_008876465.14.900e-2830.43hypothetical protein H310_11531 [Aphanomyces invad... [more]
XP_008876466.14.900e-2830.43hypothetical protein, variant [Aphanomyces invadan... [more]
OQR93202.14.900e-2832.00hypothetical protein ACHHYP_02805 [Achlya hypogyna... [more]
XP_019728777.16.400e-2828.33PREDICTED: 7SK snRNA methylphosphate capping enzym... [more]
XP_019728776.16.400e-2828.33PREDICTED: 7SK snRNA methylphosphate capping enzym... [more]
XP_020385527.11.100e-2729.61LOW QUALITY PROTEIN: 7SK snRNA methylphosphate cap... [more]
XP_006764772.21.400e-2729.33PREDICTED: 7SK snRNA methylphosphate capping enzym... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL070nonsL070Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR053ngnoR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005824NSK005824Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G00940.1NO03G00940.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100006g26gene1099Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G00940.1NO03G00940.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G00940 ID=NO03G00940|Name=NO03G00940|organism=Nannochloropsis oceanica|type=gene|length=1305bp
ATGAAGCCCGAGCTTAATGCGCTGTCGTCAACCTCCTCCCCCCCTACCGA
GCCTCCTACCGAGCCTCCTACCGTCGAGGCAACCTCACTGTCCTCCACAG
CACAAGCACCTGCGCCAGATCAACAAGAAGCACCAACGAAAGAATTGCAA
TTTGTCTTTCCAGCCTTTCGACCGCGGATCTTGGCTCTAAGAAACGTTTC
CAAGAACGACGGCAAAGTCCTAATTAAGCTGCGTCCGCCCCTCACTTGTC
CCGTCCCTTCACCGCCATCTTTTTCCTCCAAGCTCTGGCAACGTCATGCC
CACGGATCCTATCGCTCCTACTATGGCGCACGTCGTCAAGCTTCCTCCAC
AGATATAGCGTCTGCTGCTGCCATCATCCCAAGCACCATCCATCTGCCTC
CAGCCTCCAGAAGCAATCCCCCAACAGACGCCCGTCTCTCCTTACTGCAA
CCCGAATGGTTTGCTGGTAAAGATTTCTTAGACATAGGAACTAACACGGG
GAAAGTTGCCTGGGAAATTTGTCTATATTTCAAGCCTAGACGGGTGGTGG
GTGTGGATATTGATCCGGAGCTCATAAGAGTTGCAAAGGAGAAGCTGGCG
TGGGCATCCCGGAGAGAGGGAGGGAGGAATGACATCGAAAAATGGGTGGA
GTTTCGGTGTCAGGATTTCGTGGGTAGGAGGATGTTGAAGAGAAGGAGAT
GGAAAGGGGATGGGCAGGAATGTATAGGGGGGGCTGCCGCAGAGGAAGAC
GGGGGTGTAGACTGGAAGGATGTCAGGATTAAAGGATGGAAGGAGTATGG
GACGAGTGAATCAAGAGAATTCGGAGAGGAGCGACAAAATACTGAGGAGG
TTAAGGCGGAGAAGAAGGAGGATGAGAAGGATGATGAGAATGAGGTGCAG
ATGGATGTGGAAGGGACGGAAAAATACGACATCATAAGCTGTTTCTCGGT
TACAAAACATATACATTTACAAGGCGGAGACGCCGCGCTCCGTCGACTCC
TCCATCGAGTCCACGCACGACTACGGCCAGGTGGCCGATTTATCCTCGAG
CCACAGGCATGGCGAACGTATCGAAAACGGAGGCATGCCTCGGTGGAATC
TCGGAAAAATTACACTCTGTTACGTCTTCGGCCGCCCTTCAAAGATGTAT
TGATGAACGAGGTTGGATTTGAGAGCGTAGAGGACCTGGGGATTCCACTC
AATGCACCAGTGGGGTATAGAAGGCCAATGTATTGTTTTGTCAAAAGGAG
AGAAGAAGCCGAAGAAAGTGTGGAGAGAGGTCAGAAGGGGTCGGTGGGGG
AGTAA
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protein sequence of NO03G00940.1

>NO03G00940.1-protein ID=NO03G00940.1-protein|Name=NO03G00940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=435bp
MKPELNALSSTSSPPTEPPTEPPTVEATSLSSTAQAPAPDQQEAPTKELQ
FVFPAFRPRILALRNVSKNDGKVLIKLRPPLTCPVPSPPSFSSKLWQRHA
HGSYRSYYGARRQASSTDIASAAAIIPSTIHLPPASRSNPPTDARLSLLQ
PEWFAGKDFLDIGTNTGKVAWEICLYFKPRRVVGVDIDPELIRVAKEKLA
WASRREGGRNDIEKWVEFRCQDFVGRRMLKRRRWKGDGQECIGGAAAEED
GGVDWKDVRIKGWKEYGTSESREFGEERQNTEEVKAEKKEDEKDDENEVQ
MDVEGTEKYDIISCFSVTKHIHLQGGDAALRRLLHRVHARLRPGGRFILE
PQAWRTYRKRRHASVESRKNYTLLRLRPPFKDVLMNEVGFESVEDLGIPL
NAPVGYRRPMYCFVKRREEAEESVERGQKGSVGE*
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