NO03G00930, NO03G00930 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G00930 vs. NCBI_GenBank
Match: EWM29553.1 (hypothetical protein Naga_100006g27 [Nannochloropsis gaditana]) HSP 1 Score: 377.9 bits (969), Expect = 2.900e-101 Identity = 190/287 (66.20%), Postives = 230/287 (80.14%), Query Frame = 0 Query: 1 MGWLERYHASPHQQSINTALMLAGILSISMPLVVEGVQFILRLRRRKDQDTTSFQTSTNEVYRVVLTGGPCSGKTSSLAHVRAACKQAGFEALVVPEVPTILMEGGATYPGLEAGHRLIAFEAALIRLQLQIEESFVTIARSLGKPTVVLMDRGSVDICAYLMPKDWLATLSALGGLTTSDLISRYHQVIHLVTAADGAESFYQLSNNTARTESPKDARVIDRRIQAAWSQHPHLVVLCNDTDFAGKLDKATNAVLTGAREFFRAGAGSGTPAVGDVGKGKGEGGQD 288 MG LERYHASPH+Q IN LM+AG LS+S+PL+ EGVQFILR RRR D D T + + +++YRVV++GGPCSGKTSSL H+R AC AG+E LVVPEVPT+LM+GGA YPGL+ G RL+AFE ALI+LQ+Q+EESF IARS G+PTV+L DRGSVD+ AYLMP DWLA LSALGGL+T DL SRYHQV+HLVTAADGA SFY LSNN +RTES KD+RVIDRRI++AWS HPH V++ N+TDFAGKL KAT+ VL GA +FF + GD+ +G GG++ Sbjct: 1 MGLLERYHASPHRQKINNVLMVAGFLSLSVPLLAEGVQFILRFRRRTD-DKTVTRRAPSKIYRVVVSGGPCSGKTSSLTHLRDACMHAGYEVLVVPEVPTLLMQGGALYPGLDGGPRLVAFEVALIQLQIQMEESFAMIARSTGQPTVILHDRGSVDVAAYLMPSDWLAVLSALGGLSTLDLASRYHQVVHLVTAADGAPSFYTLSNNASRTESAKDSRVIDRRIKSAWSLHPHQVIIGNETDFAGKLAKATDVVLVGAHKFF----SEASKETGDIEEGGCGGGEN 282
BLAST of NO03G00930 vs. NCBI_GenBank
Match: XP_005759087.1 (hypothetical protein EMIHUDRAFT_249770 [Emiliania huxleyi CCMP1516] >EOD06658.1 hypothetical protein EMIHUDRAFT_249770 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 174.1 bits (440), Expect = 6.400e-40 Identity = 93/205 (45.37%), Postives = 129/205 (62.93%), Query Frame = 0 Query: 56 TSTNEVYRVVLTGGPCSGKTSSLAHVRAACKQAGFEALVVPEVPTILMEGGATYPGLEAGHRLIAFEAALIRLQLQIEESFVTIARSLG-------KPTVVLMDRGSVDICAYLMPKDWLATLSALGGLTTSDLISRYHQVIHLVTAADGAESFYQLSNNTARTESPKDARVIDRRIQAAWSQHPHLVVLCNDTDFAGKLDKATN 254 + ++ V R+VLTGGPC GK SSL H A AGF+ L VPEVPTI++ GG +PG + G +L+AFE AL++ Q Q+E SFV +A S G +P+VV+ DRG +D+ AY+ W L GL+ L RY V+HLVTAADGAES Y+ R S K+A+ +D I+ A++ HP+ V+ N TDFAG+L + ++ Sbjct: 83 SGSHYVTRIVLTGGPCGGKHSSLKHFTGALTAAGFDVLTVPEVPTIMLNGGCQFPGQQGGQKLVAFETALVQAQRQLERSFVKVAASTGNALCRARRPSVVVFDRGILDVAAYVPRVIWRKVLFE-NGLSEEQLCHRYDLVLHLVTAADGAESHYK---TDGRHHSAKEAKALDAAIKEAYALHPNFQVVDNSTDFAGELPQESD 283
BLAST of NO03G00930 vs. NCBI_GenBank
Match: WP_008451219.1 (ATPase AAA [Prevotella amnii] >EFN90250.1 hypothetical protein HMPREF9018_0089 [Prevotella amnii CRIS 21A-A] >KGF51100.1 ATPase AAA [Prevotella amnii DNF00058] >KXB78775.1 hypothetical protein HMPREF1860_00905 [Prevotella amnii]) HSP 1 Score: 161.0 bits (406), Expect = 5.600e-36 Identity = 81/193 (41.97%), Postives = 123/193 (63.73%), Query Frame = 0 Query: 63 RVVLTGGPCSGKTSSLAHVRAACKQAGFEALVVPEVPTILMEGGATYPGLEAGHRLIAFEAALIRLQLQIEESFVTIARSLGKPTVVLMDRGSVDICAYLMPKDWLATLSALGGLTTSDLISRYHQVIHLVTAADGAESFYQLSNNTARTESPKDARVIDRRIQAAWSQHPHLVVLCNDTDFAGKLDKATNAV 256 R+VLTGGPC+GKT++L V G++ V+PEVPT+ + G Y + H E A + Q+ +E+ F IA+++ KPT+++ DRG++DI AY+ + W +S L G+T+ L SRY V+HLV+AADGAE FY +NN+ RTE + AR +D+++ AWS+HPHL V+ N DF K+++ + Sbjct: 3 RIVLTGGPCAGKTTALVKVIEHFSSIGYKVFVIPEVPTLFSQAGMDYL-TKNKHFFFEGEKATLDTQIALEDHFSRIAKTIKKPTIIVCDRGTMDISAYMNNEMWQEIISGL-GITSDTLRSRYDAVLHLVSAADGAEQFYTTANNSERTEGIELARKLDKKVIQAWSEHPHLRVINNHEDFDTKINRVLQEI 193
BLAST of NO03G00930 vs. NCBI_GenBank
Match: WP_019036376.1 (ATPase AAA [Prevotella amnii]) HSP 1 Score: 161.0 bits (406), Expect = 5.600e-36 Identity = 81/193 (41.97%), Postives = 123/193 (63.73%), Query Frame = 0 Query: 63 RVVLTGGPCSGKTSSLAHVRAACKQAGFEALVVPEVPTILMEGGATYPGLEAGHRLIAFEAALIRLQLQIEESFVTIARSLGKPTVVLMDRGSVDICAYLMPKDWLATLSALGGLTTSDLISRYHQVIHLVTAADGAESFYQLSNNTARTESPKDARVIDRRIQAAWSQHPHLVVLCNDTDFAGKLDKATNAV 256 R+VLTGGPC+GKT++L V G++ V+PEVPT+ + G Y + H E A + Q+ +E+ F IA+++ KPT+++ DRG++DI AY+ + W +S L G+T+ L SRY V+HLV+AADGAE FY +NN+ RTE + AR +D+++ AWS+HPHL V+ N DF K+++ + Sbjct: 3 RIVLTGGPCAGKTTALVKVIEHFSSIGYKVFVIPEVPTLFSQAGMDYL-TKNKHFFFEGEKATLDTQIALEDHFSRIAKTIKKPTIIVCDRGTMDISAYMNNEMWQEIISGL-GITSDTLRSRYDAVLHLVSAADGAEQFYTTANNSERTEGIELARKLDKKVIQAWSEHPHLRVINNHEDFDTKINRVLQEI 193
BLAST of NO03G00930 vs. NCBI_GenBank
Match: XP_004335236.1 (hypothetical protein ACA1_100600 [Acanthamoeba castellanii str. Neff] >ELR13223.1 hypothetical protein ACA1_100600 [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 160.6 bits (405), Expect = 7.300e-36 Identity = 88/218 (40.37%), Postives = 126/218 (57.80%), Query Frame = 0 Query: 57 STNEVYRVVLTGGPCSGKTSSLAHVRAACKQAGFEALVVPEVPTILMEGGATYPGLEAGHRLIAFEAALIRLQLQIEESFVTIARSLGKPTVVLMDRGSVDICAYLMPKDWLATLSALGGLTTSDLISRYHQVIHLVTAADGAESFYQLSNNTARTESPKDARVIDRRIQAAWSQHPHLVVLCNDTDFAGKLDKATNAVLTGAREFFRAGAGSGTPAV 275 S ++VY VVLTGGPC GK+++LA + + G+E VPE+PT++ G +L+AFE ++ Q+Q+EES IA ++ KPTV+L+DR ++DI AYL W L L +T L RY V+HLVTAA+GAES+Y +NN ARTE + AR +D +++ AW H V N TDF GK+ + + + +A TP V Sbjct: 90 SDSQVYTVVLTGGPCGGKSTALATLTKHLRAQGYEVYSVPEIPTLVFTAGVPTISSMNEEQLLAFEKQILTTQIQLEESMKKIASAMDKPTVILLDRAALDISAYLPYSFWKKLLQDL-DITEKQLRERYTAVVHLVTAANGAESYYTTANNAARTEGIEQARELDDKVKHAWIAHTRTFVADNTTDFPGKMQRVCSFLDDVLTSQHKAAPTKETPEV 306
BLAST of NO03G00930 vs. NCBI_GenBank
Match: XP_005761754.1 (hypothetical protein EMIHUDRAFT_216731 [Emiliania huxleyi CCMP1516] >XP_005791125.1 hypothetical protein EMIHUDRAFT_251702 [Emiliania huxleyi CCMP1516] >EOD09325.1 hypothetical protein EMIHUDRAFT_216731 [Emiliania huxleyi CCMP1516] >EOD38696.1 hypothetical protein EMIHUDRAFT_251702 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 160.2 bits (404), Expect = 9.500e-36 Identity = 100/268 (37.31%), Postives = 149/268 (55.60%), Query Frame = 0 Query: 2 GWLERYH-ASPHQQSINTALMLAGILSISMPLVVEGVQFILRLRRRKDQDTTSFQTSTNEVYRVVLTGGPCSGKTSSLAHVRAACKQAGFEALVVPEVPTILMEGGATYPGLEAGHRLIAFEAALIRLQLQIEESFVTIARSLGKPTVVLMDRGSVDICAYLMPKDWLATLSALGGLTTSDLISRYHQVIHLVTAADGAESFYQLSNNT-------ARTESPKDARVIDRRIQAAWSQHPHLVVLCNDTDFAGKLDKATNAVLTGARE 262 G+ YH + ++S + A+++A L+ S L+ RL + + + N V + LTGGPC+GKTS+L + A+ K AGF +V E+ T++ GG EA +AF+ +L+RLQ+Q+E++ + + PT+++ DRG++D +Y+ P W A L A+G T L+SRY VIHLVTAADGA Y+ N T R ESP++A V DRR QAAW+ HP V++ N F+ K A A+L A E Sbjct: 12 GFCYPYHRVATAEESYHLAVVVALCLTFSAALLAP------RLVAAALHSSLTARAPQNLV-TIALTGGPCAGKTSALTALEASAKSAGFHLMVTTEIATLMRAGGCD----EAITPALAFQTSLVRLQVQLEDALAAVGAATDLPTILITDRGAMDAKSYMSPHTWSAVLEAIGA-TEESLLSRYDGVIHLVTAADGAPQSYKWGNVTDDSGHWVYRKESPEEAIVTDRRTQAAWAAHPRRVIIPNAGSFSNKTKHAAMAMLMIAHE 267
BLAST of NO03G00930 vs. NCBI_GenBank
Match: KOO30836.1 (aaa domain protein, partial [Chrysochromulina sp. CCMP291]) HSP 1 Score: 160.2 bits (404), Expect = 9.500e-36 Identity = 94/229 (41.05%), Postives = 133/229 (58.08%), Query Frame = 0 Query: 62 YRVVLTGGPCSGKTSSLAHVRAACKQAGFEALVVPEVPTILMEGGATYPGLEAGHRLIAFEAALIRLQLQIEESFVTIARSLGKPTVVLMDRGSVDICAYLMPKDWLATLSALGGLTTSDLISR--------YHQVIHLVTAADGAESFYQLSNNT----ARTESPKDARVIDRR-----------------IQAAWSQ-HPHLVVLCNDTDFAGKLDKATNAVLTGAR 261 + VV TGGPC GK+S+L + +A + G++ L+VPEVPTIL GG YPG+ G +L+ +E ++ LQLQ+EESF+ IA S G+PTV++M+RG +D+ AYL K W L LT +++ +R Y V+HL TAA+GAE FY N T RTE+ ++AR +D R I W + H +VV+ N TDF K+ +A+ AVL R Sbjct: 146 FTVVFTGGPCGGKSSTLGPLASALRAEGWQVLLVPEVPTILKTGGCIYPGVAGGSKLLEYEKGVLELQLQMEESFLRIAASTGQPTVLIMERGLLDLPAYLPTKQWRQVLRD-NALTETEIAARYDLVLQIPYDLVLHLKTAAEGAEPFYSTLNTTPTDGVRTETAEEARELDARSGGNQGVIXXXXXXXXXIFLIWKRVHRSVVVIDNSTDFGQKVTRASGAVLGALR 373
BLAST of NO03G00930 vs. NCBI_GenBank
Match: KRX07331.1 (P-loop containing nucleoside triphosphate hydrolase [Pseudocohnilembus persalinus]) HSP 1 Score: 160.2 bits (404), Expect = 9.500e-36 Identity = 84/203 (41.38%), Postives = 119/203 (58.62%), Query Frame = 0 Query: 55 QTSTNEVYRVVLTGGPCSGKTSSLAHVRAACKQAGFEALVVPEVPTILMEGGA-TYPGLEAGHRLIAFEAALIRLQLQIEESFVTIARSLGKPTVVLMDRGSVDICAYLMPKDWLATLSALGGLTTSDLISRYHQVIHLVTAADGAESFYQLSNNTARTESPKDARVIDRRIQAAWSQHPHLVVLCNDTD-FAGKLDKATNAV 256 Q N +YR+ LTGGPC+GKT++L ++ Q GF+ VVPEVPT+ MEGG G + ++ F+ L++ Q+ +E+ F +A GKP+V+L DRG +D AY+ W A L + RY V+H+VTAADGAE FY L NN AR E AR++D+ +Q AW+ HPH + + N D F K+ +AV Sbjct: 2 QGEENPIYRICLTGGPCAGKTTALNQLKDHLSQKGFKVFVVPEVPTLTMEGGGMIVMGGLSQEKICQFQGLLMKAQMDLEDYFYNLAVLAGKPSVILYDRGVMDPKAYMDEPTWQAVLDLYNYNSVYLRDKRYQVVLHMVTAADGAEKFYTLENNAARYEDAPTARIVDKNLQNAWAGHPHHIFIDNSGDGFEAKIKNTIHAV 204
BLAST of NO03G00930 vs. NCBI_GenBank
Match: WP_019967079.1 (ATPase AAA [Prevotella maculosa]) HSP 1 Score: 158.3 bits (399), Expect = 3.600e-35 Identity = 80/199 (40.20%), Postives = 119/199 (59.80%), Query Frame = 0 Query: 58 TNEVYRVVLTGGPCSGKTSSLAHVRAACKQAGFEALVVPEVPTILMEGGATYPGLEAGHRLI-AFEAALIRLQLQIEESFVTIARSLGKPTVVLMDRGSVDICAYLMPKDWLATLSALGGLTTSDLISRYHQVIHLVTAADGAESFYQLSNNTARTESPKDARVIDRRIQAAWSQHPHLVVLCNDTDFAGKLDKATNAV 256 TN + ++VLTGGPC+GKT++L V G++ +PEVPT+ + G Y L +L E A + +QL +E+ F +A +P +++ DRG++DI AY+ P+ W A+G TT+ RY V+HLV+AADGAE FY +NN RTE + AR+ID+++ AW+ HPHL V+ N DF KL + + Sbjct: 2 TNSIKKIVLTGGPCAGKTTALVKVIEHFSSLGYKVFTIPEVPTMFSQSGMDY--LTTNRKLFYEGEKATLEVQLALEDKFQRMAEQCEEPVIIICDRGAMDISAYMSPETWDTITKAVGTSTTALRDQRYDAVLHLVSAADGAEKFYTTTNNKQRTEGLEMARLIDKKVIDAWTGHPHLRVINNHEDFNNKLHRVLKEI 198
BLAST of NO03G00930 vs. NCBI_GenBank
Match: ETI38300.1 (hypothetical protein F443_15899 [Phytophthora parasitica P1569] >ETK78538.1 hypothetical protein L915_15452 [Phytophthora parasitica] >ETL31976.1 hypothetical protein L916_15347 [Phytophthora parasitica] >ETL85195.1 hypothetical protein L917_15174 [Phytophthora parasitica] >ETM38359.1 hypothetical protein L914_15312 [Phytophthora parasitica] >ETO67070.1 hypothetical protein F444_15883 [Phytophthora parasitica P1976] >ETP08226.1 hypothetical protein F441_15734 [Phytophthora parasitica CJ01A1] >ETP36291.1 hypothetical protein F442_15743 [Phytophthora parasitica P10297]) HSP 1 Score: 157.9 bits (398), Expect = 4.700e-35 Identity = 93/217 (42.86%), Postives = 124/217 (57.14%), Query Frame = 0 Query: 53 SFQTSTNEVYRVVLTGGPCSGKTSSLAHVRAACKQAGFEALVVPEVPTILMEGGATYPGLEAGHRLIAFEAALIRLQLQIEESFVTIARSLGKPTVVLMDRGSVDICAYLMPKDW--LATLSALGGLTTSDLISRYHQVIHLVTAADGAESFYQLSNNTARTESPKDARVIDRRIQAAWSQHPHLVVLCNDTDFAGKLDKA--TNAVLTGAREFFRA 266 S Q +Y+ VLTGGPC+GKT+SL + + GF VVPE T+L GGA + L+ ++ F+ ++ LQ+ +E+SF ++A+ GKP V+L DRG +D AY+ P+ W L L +T D +RY + HLVTAADGAE FY L NN R ES + AR ID+R AW HP L V N T F GK+ + T A L G RA Sbjct: 30 SGQKDIAPIYKFVLTGGPCAGKTTSLDRLSTFFRDRGFRVYVVPEASTLLQTGGAFFLDLQE-KDILNFQWQILNLQISLEDSFYSLAQDSGKPCVILCDRGVMDGSAYMTPEQWEELKLQHDLDTVTLRD--TRYIAIFHLVTAADGAEKFYSLENNGIRIESIEQARAIDKRTCHAWIGHPKLYVFDNSTTFEGKMQRLVDTAAGLCGIPTTVRA 243 The following BLAST results are available for this feature:
BLAST of NO03G00930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G00930 ID=NO03G00930|Name=NO03G00930|organism=Nannochloropsis oceanica|type=gene|length=3510bpback to top protein sequence of NO03G00930.1 >NO03G00930.1-protein ID=NO03G00930.1-protein|Name=NO03G00930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=292bpback to top protein sequence of NO03G00930.2 >NO03G00930.2-protein ID=NO03G00930.2-protein|Name=NO03G00930.2|organism=Nannochloropsis oceanica|type=polypeptide|length=329bpback to top protein sequence of NO03G00930.3 >NO03G00930.3-protein ID=NO03G00930.3-protein|Name=NO03G00930.3|organism=Nannochloropsis oceanica|type=polypeptide|length=209bpback to top Synonyms
Publications
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